FastQCFastQC Report
Wed 7 Sep 2022
G192M3_1.fq

Summary

[OK]Basic Statistics

MeasureValue
FilenameG192M3_1.fq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences27397400
Sequences flagged as poor quality0
Sequence length150
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGTAATCATTTATTGAACAGGAAGAGGAAGAAATTCATGAAAAATTGTC384820.14045858366122332No Hit
CAGCGATTGGCATTGGATAGGTCAATGATATTTTCTCTAAGGATTCCATG325540.11882149401038056No Hit
GAAAGACGTGGTCCTGACAGACAGACAATCCTATTCCCTACCAAAATGAA304630.11118938293414704No Hit
CTGGAGGCAGCGATTGGCATTGGATAGGTCAATGATATTTTCTCTAAGGA281980.102922175096907No Hit
CTGGAATTGGACTTCTCAGTGAGACAGGATGGAATGCAGATCACAGAATT275510.10056063714075059No Hit
GCAAGGGTAATCATTTATTGAACAGGAAGAGGAAGAAATTCATGAAAAAT274200.10008248957930316No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)