Sample	STAR_mqc-generalstats-star-uniquely_mapped_percent	STAR_mqc-generalstats-star-uniquely_mapped	featureCounts_mqc-generalstats-featurecounts-percent_assigned	featureCounts_mqc-generalstats-featurecounts-Assigned	Samtools_mqc-generalstats-samtools-flagstat_total	Samtools_mqc-generalstats-samtools-mapped_passed
G174_M10_G174_M10	78.99	21184121.0				
G174_M10_sorted			94.37182689808088	19991842		
G174_M10_statistics_for_all_accepted_reads					49382424	49382424
G174_M10_statistics_for_primary_reads					45024580	45024580
G174_M10_statistics_for_primary_unique_reads					42368242	42368242
G174_M11_G174_M11	80.43	26171861.0				
G174_M11_sorted			94.72442559587184	24791145		
G174_M11_statistics_for_all_accepted_reads					60688154	60688154
G174_M11_statistics_for_primary_reads					55488978	55488978
G174_M11_statistics_for_primary_unique_reads					52343722	52343722
G174_M12_G174_M12	80.91	19205097.0				
G174_M12_sorted			95.33910190612418	18309967		
G174_M12_statistics_for_all_accepted_reads					44503712	44503712
G174_M12_statistics_for_primary_reads					40608732	40608732
G174_M12_statistics_for_primary_unique_reads					38410194	38410194
G174_M13_G174_M13	73.59	17688905.0				
G174_M13_sorted			94.04567439307294	16635650		
G174_M13_statistics_for_all_accepted_reads					42228236	42228236
G174_M13_statistics_for_primary_reads					37847252	37847252
G174_M13_statistics_for_primary_unique_reads					35377810	35377810
G174_M1_G174_M1	62.41	12709447.0				
G174_M1_sorted			94.08969564136032	11958280		
G174_M1_statistics_for_all_accepted_reads					31578288	31578288
G174_M1_statistics_for_primary_reads					27371522	27371522
G174_M1_statistics_for_primary_unique_reads					25418894	25418894
G174_M2_G174_M2	76.76	21282481.0				
G174_M2_sorted			95.50497895428639	20325829		
G174_M2_statistics_for_all_accepted_reads					51072550	51072550
G174_M2_statistics_for_primary_reads					45394176	45394176
G174_M2_statistics_for_primary_unique_reads					42564962	42564962
G174_M3_G174_M3	79.67	20111368.0				
G174_M3_sorted			95.48550352218706	19203441		
G174_M3_statistics_for_all_accepted_reads					47552944	47552944
G174_M3_statistics_for_primary_reads					42738884	42738884
G174_M3_statistics_for_primary_unique_reads					40222736	40222736
G174_M4_G174_M4	64.3	10725178.0				
G174_M4_sorted			93.5158465435259	10029741		
G174_M4_statistics_for_all_accepted_reads					27340662	27340662
G174_M4_statistics_for_primary_reads					23345198	23345198
G174_M4_statistics_for_primary_unique_reads					21450356	21450356
G174_M5_G174_M5	76.36	24870039.0				
G174_M5_sorted			94.91151179939847	23604530		
G174_M5_statistics_for_all_accepted_reads					59871462	59871462
G174_M5_statistics_for_primary_reads					53161880	53161880
G174_M5_statistics_for_primary_unique_reads					49740078	49740078
G174_M6_G174_M6	69.5	15570601.0				
G174_M6_sorted			94.33333369726705	14688267		
G174_M6_statistics_for_all_accepted_reads					38447050	38447050
G174_M6_statistics_for_primary_reads					33604962	33604962
G174_M6_statistics_for_primary_unique_reads					31141202	31141202
G174_M7_G174_M7	77.84	23423510.0				
G174_M7_sorted			95.26007844255622	22313254		
G174_M7_statistics_for_all_accepted_reads					54141286	54141286
G174_M7_statistics_for_primary_reads					49496538	49496538
G174_M7_statistics_for_primary_unique_reads					46847020	46847020
G174_M8_G174_M8	80.24	23413314.0				
G174_M8_sorted			95.08474964287413	22262491		
G174_M8_statistics_for_all_accepted_reads					53541876	53541876
G174_M8_statistics_for_primary_reads					49323154	49323154
G174_M8_statistics_for_primary_unique_reads					46826628	46826628
G174_M9_G174_M9	72.33	10445828.0				
G174_M9_sorted			93.61650412011379	9779019		
G174_M9_statistics_for_all_accepted_reads					26134488	26134488
G174_M9_statistics_for_primary_reads					22753372	22753372
G174_M9_statistics_for_primary_unique_reads					20891656	20891656