Sample total_passed total_failed secondary_passed secondary_failed supplementary_passed supplementary_failed duplicates_passed duplicates_failed mapped_passed mapped_failed mapped_passed_pct mapped_failed_pct paired in sequencing_passed paired in sequencing_failed read1_passed read1_failed read2_passed read2_failed properly paired_passed properly paired_failed properly paired_passed_pct properly paired_failed_pct with itself and mate mapped_passed with itself and mate mapped_failed singletons_passed singletons_failed singletons_passed_pct singletons_failed_pct with mate mapped to a different chr_passed with mate mapped to a different chr_failed with mate mapped to a different chr (mapQ >= 5)_passed with mate mapped to a different chr (mapQ >= 5)_failed flagstat_total G175_M10_statistics_for_all_accepted_reads 29440368 0 1976022 0 0 0 0 0 29440368 0 100.0 nan 27464346 0 13732173 0 13732173 0 27464346 0 100.0 nan 27464346 0 0 0 0.0 nan 0 0 0 0 29440368 G175_M10_statistics_for_primary_reads 27464346 0 0 0 0 0 0 0 27464346 0 100.0 nan 27464346 0 13732173 0 13732173 0 27464346 0 100.0 nan 27464346 0 0 0 0.0 nan 0 0 0 0 27464346 G175_M10_statistics_for_primary_unique_reads 26401612 0 0 0 0 0 0 0 26401612 0 100.0 nan 26401612 0 13200806 0 13200806 0 26401612 0 100.0 nan 26401612 0 0 0 0.0 nan 0 0 0 0 26401612 G175_M11_statistics_for_all_accepted_reads 27759940 0 2061650 0 0 0 0 0 27759940 0 100.0 nan 25698290 0 12849145 0 12849145 0 25698290 0 100.0 nan 25698290 0 0 0 0.0 nan 0 0 0 0 27759940 G175_M11_statistics_for_primary_reads 25698290 0 0 0 0 0 0 0 25698290 0 100.0 nan 25698290 0 12849145 0 12849145 0 25698290 0 100.0 nan 25698290 0 0 0 0.0 nan 0 0 0 0 25698290 G175_M11_statistics_for_primary_unique_reads 24592718 0 0 0 0 0 0 0 24592718 0 100.0 nan 24592718 0 12296359 0 12296359 0 24592718 0 100.0 nan 24592718 0 0 0 0.0 nan 0 0 0 0 24592718 G175_M12_statistics_for_all_accepted_reads 34894836 0 2708166 0 0 0 0 0 34894836 0 100.0 nan 32186670 0 16093335 0 16093335 0 32186670 0 100.0 nan 32186670 0 0 0 0.0 nan 0 0 0 0 34894836 G175_M12_statistics_for_primary_reads 32186670 0 0 0 0 0 0 0 32186670 0 100.0 nan 32186670 0 16093335 0 16093335 0 32186670 0 100.0 nan 32186670 0 0 0 0.0 nan 0 0 0 0 32186670 G175_M12_statistics_for_primary_unique_reads 30740006 0 0 0 0 0 0 0 30740006 0 100.0 nan 30740006 0 15370003 0 15370003 0 30740006 0 100.0 nan 30740006 0 0 0 0.0 nan 0 0 0 0 30740006 G175_M13_statistics_for_all_accepted_reads 23442856 0 1886490 0 0 0 0 0 23442856 0 100.0 nan 21556366 0 10778183 0 10778183 0 21556366 0 100.0 nan 21556366 0 0 0 0.0 nan 0 0 0 0 23442856 G175_M13_statistics_for_primary_reads 21556366 0 0 0 0 0 0 0 21556366 0 100.0 nan 21556366 0 10778183 0 10778183 0 21556366 0 100.0 nan 21556366 0 0 0 0.0 nan 0 0 0 0 21556366 G175_M13_statistics_for_primary_unique_reads 20563736 0 0 0 0 0 0 0 20563736 0 100.0 nan 20563736 0 10281868 0 10281868 0 20563736 0 100.0 nan 20563736 0 0 0 0.0 nan 0 0 0 0 20563736 G175_M1_statistics_for_all_accepted_reads 35277488 0 3567256 0 0 0 0 0 35277488 0 100.0 nan 31710232 0 15855116 0 15855116 0 31710232 0 100.0 nan 31710232 0 0 0 0.0 nan 0 0 0 0 35277488 G175_M1_statistics_for_primary_reads 31710232 0 0 0 0 0 0 0 31710232 0 100.0 nan 31710232 0 15855116 0 15855116 0 31710232 0 100.0 nan 31710232 0 0 0 0.0 nan 0 0 0 0 31710232 G175_M1_statistics_for_primary_unique_reads 30134930 0 0 0 0 0 0 0 30134930 0 100.0 nan 30134930 0 15067465 0 15067465 0 30134930 0 100.0 nan 30134930 0 0 0 0.0 nan 0 0 0 0 30134930 G175_M2_statistics_for_all_accepted_reads 32114726 0 3149558 0 0 0 0 0 32114726 0 100.0 nan 28965168 0 14482584 0 14482584 0 28965168 0 100.0 nan 28965168 0 0 0 0.0 nan 0 0 0 0 32114726 G175_M2_statistics_for_primary_reads 28965168 0 0 0 0 0 0 0 28965168 0 100.0 nan 28965168 0 14482584 0 14482584 0 28965168 0 100.0 nan 28965168 0 0 0 0.0 nan 0 0 0 0 28965168 G175_M2_statistics_for_primary_unique_reads 27515962 0 0 0 0 0 0 0 27515962 0 100.0 nan 27515962 0 13757981 0 13757981 0 27515962 0 100.0 nan 27515962 0 0 0 0.0 nan 0 0 0 0 27515962 G175_M3_statistics_for_all_accepted_reads 44260222 0 3649916 0 0 0 0 0 44260222 0 100.0 nan 40610306 0 20305153 0 20305153 0 40610306 0 100.0 nan 40610306 0 0 0 0.0 nan 0 0 0 0 44260222 G175_M3_statistics_for_primary_reads 40610306 0 0 0 0 0 0 0 40610306 0 100.0 nan 40610306 0 20305153 0 20305153 0 40610306 0 100.0 nan 40610306 0 0 0 0.0 nan 0 0 0 0 40610306 G175_M3_statistics_for_primary_unique_reads 38823264 0 0 0 0 0 0 0 38823264 0 100.0 nan 38823264 0 19411632 0 19411632 0 38823264 0 100.0 nan 38823264 0 0 0 0.0 nan 0 0 0 0 38823264 G175_M4_statistics_for_all_accepted_reads 36963052 0 4104884 0 0 0 0 0 36963052 0 100.0 nan 32858168 0 16429084 0 16429084 0 32858168 0 100.0 nan 32858168 0 0 0 0.0 nan 0 0 0 0 36963052 G175_M4_statistics_for_primary_reads 32858168 0 0 0 0 0 0 0 32858168 0 100.0 nan 32858168 0 16429084 0 16429084 0 32858168 0 100.0 nan 32858168 0 0 0 0.0 nan 0 0 0 0 32858168 G175_M4_statistics_for_primary_unique_reads 31000980 0 0 0 0 0 0 0 31000980 0 100.0 nan 31000980 0 15500490 0 15500490 0 31000980 0 100.0 nan 31000980 0 0 0 0.0 nan 0 0 0 0 31000980 G175_M5_statistics_for_all_accepted_reads 32361818 0 2961172 0 0 0 0 0 32361818 0 100.0 nan 29400646 0 14700323 0 14700323 0 29400646 0 100.0 nan 29400646 0 0 0 0.0 nan 0 0 0 0 32361818 G175_M5_statistics_for_primary_reads 29400646 0 0 0 0 0 0 0 29400646 0 100.0 nan 29400646 0 14700323 0 14700323 0 29400646 0 100.0 nan 29400646 0 0 0 0.0 nan 0 0 0 0 29400646 G175_M5_statistics_for_primary_unique_reads 27979632 0 0 0 0 0 0 0 27979632 0 100.0 nan 27979632 0 13989816 0 13989816 0 27979632 0 100.0 nan 27979632 0 0 0 0.0 nan 0 0 0 0 27979632 G175_M6_statistics_for_all_accepted_reads 32367276 0 2992934 0 0 0 0 0 32367276 0 100.0 nan 29374342 0 14687171 0 14687171 0 29374342 0 100.0 nan 29374342 0 0 0 0.0 nan 0 0 0 0 32367276 G175_M6_statistics_for_primary_reads 29374342 0 0 0 0 0 0 0 29374342 0 100.0 nan 29374342 0 14687171 0 14687171 0 29374342 0 100.0 nan 29374342 0 0 0 0.0 nan 0 0 0 0 29374342 G175_M6_statistics_for_primary_unique_reads 27905832 0 0 0 0 0 0 0 27905832 0 100.0 nan 27905832 0 13952916 0 13952916 0 27905832 0 100.0 nan 27905832 0 0 0 0.0 nan 0 0 0 0 27905832 G175_M7_statistics_for_all_accepted_reads 32876108 0 2211862 0 0 0 0 0 32876108 0 100.0 nan 30664246 0 15332123 0 15332123 0 30664246 0 100.0 nan 30664246 0 0 0 0.0 nan 0 0 0 0 32876108 G175_M7_statistics_for_primary_reads 30664246 0 0 0 0 0 0 0 30664246 0 100.0 nan 30664246 0 15332123 0 15332123 0 30664246 0 100.0 nan 30664246 0 0 0 0.0 nan 0 0 0 0 30664246 G175_M7_statistics_for_primary_unique_reads 29504430 0 0 0 0 0 0 0 29504430 0 100.0 nan 29504430 0 14752215 0 14752215 0 29504430 0 100.0 nan 29504430 0 0 0 0.0 nan 0 0 0 0 29504430 G175_M8_statistics_for_all_accepted_reads 32450220 0 2055566 0 0 0 0 0 32450220 0 100.0 nan 30394654 0 15197327 0 15197327 0 30394654 0 100.0 nan 30394654 0 0 0 0.0 nan 0 0 0 0 32450220 G175_M8_statistics_for_primary_reads 30394654 0 0 0 0 0 0 0 30394654 0 100.0 nan 30394654 0 15197327 0 15197327 0 30394654 0 100.0 nan 30394654 0 0 0 0.0 nan 0 0 0 0 30394654 G175_M8_statistics_for_primary_unique_reads 29273088 0 0 0 0 0 0 0 29273088 0 100.0 nan 29273088 0 14636544 0 14636544 0 29273088 0 100.0 nan 29273088 0 0 0 0.0 nan 0 0 0 0 29273088 G175_M9_statistics_for_all_accepted_reads 31698940 0 2495504 0 0 0 0 0 31698940 0 100.0 nan 29203436 0 14601718 0 14601718 0 29203436 0 100.0 nan 29203436 0 0 0 0.0 nan 0 0 0 0 31698940 G175_M9_statistics_for_primary_reads 29203436 0 0 0 0 0 0 0 29203436 0 100.0 nan 29203436 0 14601718 0 14601718 0 29203436 0 100.0 nan 29203436 0 0 0 0.0 nan 0 0 0 0 29203436 G175_M9_statistics_for_primary_unique_reads 27999580 0 0 0 0 0 0 0 27999580 0 100.0 nan 27999580 0 13999790 0 13999790 0 27999580 0 100.0 nan 27999580 0 0 0 0.0 nan 0 0 0 0 27999580