Sample total_passed total_failed secondary_passed secondary_failed supplementary_passed supplementary_failed duplicates_passed duplicates_failed mapped_passed mapped_failed mapped_passed_pct mapped_failed_pct paired in sequencing_passed paired in sequencing_failed read1_passed read1_failed read2_passed read2_failed properly paired_passed properly paired_failed properly paired_passed_pct properly paired_failed_pct with itself and mate mapped_passed with itself and mate mapped_failed singletons_passed singletons_failed singletons_passed_pct singletons_failed_pct with mate mapped to a different chr_passed with mate mapped to a different chr_failed with mate mapped to a different chr (mapQ >= 5)_passed with mate mapped to a different chr (mapQ >= 5)_failed flagstat_total G177REL15_M10_statistics_for_all_accepted_reads 105570230 0 16265090 0 0 0 0 0 105570230 0 100.0 nan 89305140 0 44528172 0 44776968 0 83318374 0 93.3 nan 83318374 0 5986766 0 6.7 nan 0 0 0 0 105570230 G177REL15_M10_statistics_for_primary_reads 89305140 0 0 0 0 0 0 0 89305140 0 100.0 nan 89305140 0 44528172 0 44776968 0 83318374 0 93.3 nan 83318374 0 5986766 0 6.7 nan 0 0 0 0 89305140 G177REL15_M10_statistics_for_primary_unique_reads 79687297 0 0 0 0 0 0 0 79687297 0 100.0 nan 79687297 0 39805087 0 39882210 0 77207352 0 96.89 nan 77207352 0 2479945 0 3.11 nan 0 0 0 0 79687297 G177REL15_M11_statistics_for_all_accepted_reads 104302314 0 14539982 0 0 0 0 0 104302314 0 100.0 nan 89762332 0 44733419 0 45028913 0 83793388 0 93.35 nan 83793388 0 5968944 0 6.65 nan 0 0 0 0 104302314 G177REL15_M11_statistics_for_primary_reads 89762332 0 0 0 0 0 0 0 89762332 0 100.0 nan 89762332 0 44733419 0 45028913 0 83793388 0 93.35 nan 83793388 0 5968944 0 6.65 nan 0 0 0 0 89762332 G177REL15_M11_statistics_for_primary_unique_reads 80667411 0 0 0 0 0 0 0 80667411 0 100.0 nan 80667411 0 40243758 0 40423653 0 78005202 0 96.7 nan 78005202 0 2662209 0 3.3 nan 0 0 0 0 80667411 G177REL15_M12_statistics_for_all_accepted_reads 78509496 0 11297159 0 0 0 0 0 78509496 0 100.0 nan 67212337 0 33475614 0 33736723 0 62452858 0 92.92 nan 62452858 0 4759479 0 7.08 nan 0 0 0 0 78509496 G177REL15_M12_statistics_for_primary_reads 67212337 0 0 0 0 0 0 0 67212337 0 100.0 nan 67212337 0 33475614 0 33736723 0 62452858 0 92.92 nan 62452858 0 4759479 0 7.08 nan 0 0 0 0 67212337 G177REL15_M12_statistics_for_primary_unique_reads 60100505 0 0 0 0 0 0 0 60100505 0 100.0 nan 60100505 0 29988296 0 30112209 0 58086752 0 96.65 nan 58086752 0 2013753 0 3.35 nan 0 0 0 0 60100505 G177REL15_M13_statistics_for_all_accepted_reads 68880650 0 10638924 0 0 0 0 0 68880650 0 100.0 nan 58241726 0 29023375 0 29218351 0 53949142 0 92.63 nan 53949142 0 4292584 0 7.37 nan 0 0 0 0 68880650 G177REL15_M13_statistics_for_primary_reads 58241726 0 0 0 0 0 0 0 58241726 0 100.0 nan 58241726 0 29023375 0 29218351 0 53949142 0 92.63 nan 53949142 0 4292584 0 7.37 nan 0 0 0 0 58241726 G177REL15_M13_statistics_for_primary_unique_reads 51842385 0 0 0 0 0 0 0 51842385 0 100.0 nan 51842385 0 25880846 0 25961539 0 50130236 0 96.7 nan 50130236 0 1712149 0 3.3 nan 0 0 0 0 51842385 G177REL15_M1_statistics_for_all_accepted_reads 107037293 0 15526609 0 0 0 0 0 107037293 0 100.0 nan 91510684 0 45584640 0 45926044 0 84769600 0 92.63 nan 84769600 0 6741084 0 7.37 nan 0 0 0 0 107037293 G177REL15_M1_statistics_for_primary_reads 91510684 0 0 0 0 0 0 0 91510684 0 100.0 nan 91510684 0 45584640 0 45926044 0 84769600 0 92.63 nan 84769600 0 6741084 0 7.37 nan 0 0 0 0 91510684 G177REL15_M1_statistics_for_primary_unique_reads 81534813 0 0 0 0 0 0 0 81534813 0 100.0 nan 81534813 0 40680471 0 40854342 0 78917270 0 96.79 nan 78917270 0 2617543 0 3.21 nan 0 0 0 0 81534813 G177REL15_M2_statistics_for_all_accepted_reads 106466473 0 16017738 0 0 0 0 0 106466473 0 100.0 nan 90448735 0 45022478 0 45426257 0 83955090 0 92.82 nan 83955090 0 6493645 0 7.18 nan 0 0 0 0 106466473 G177REL15_M2_statistics_for_primary_reads 90448735 0 0 0 0 0 0 0 90448735 0 100.0 nan 90448735 0 45022478 0 45426257 0 83955090 0 92.82 nan 83955090 0 6493645 0 7.18 nan 0 0 0 0 90448735 G177REL15_M2_statistics_for_primary_unique_reads 80434803 0 0 0 0 0 0 0 80434803 0 100.0 nan 80434803 0 40094199 0 40340604 0 77766828 0 96.68 nan 77766828 0 2667975 0 3.32 nan 0 0 0 0 80434803 G177REL15_M3_statistics_for_all_accepted_reads 77123202 0 11635919 0 0 0 0 0 77123202 0 100.0 nan 65487283 0 32617754 0 32869529 0 60642160 0 92.6 nan 60642160 0 4845123 0 7.4 nan 0 0 0 0 77123202 G177REL15_M3_statistics_for_primary_reads 65487283 0 0 0 0 0 0 0 65487283 0 100.0 nan 65487283 0 32617754 0 32869529 0 60642160 0 92.6 nan 60642160 0 4845123 0 7.4 nan 0 0 0 0 65487283 G177REL15_M3_statistics_for_primary_unique_reads 58278082 0 0 0 0 0 0 0 58278082 0 100.0 nan 58278082 0 29060806 0 29217276 0 56302252 0 96.61 nan 56302252 0 1975830 0 3.39 nan 0 0 0 0 58278082 G177REL15_M4_statistics_for_all_accepted_reads 83921566 0 13141599 0 0 0 0 0 83921566 0 100.0 nan 70779967 0 35259808 0 35520159 0 65903812 0 93.11 nan 65903812 0 4876155 0 6.89 nan 0 0 0 0 83921566 G177REL15_M4_statistics_for_primary_reads 70779967 0 0 0 0 0 0 0 70779967 0 100.0 nan 70779967 0 35259808 0 35520159 0 65903812 0 93.11 nan 65903812 0 4876155 0 6.89 nan 0 0 0 0 70779967 G177REL15_M4_statistics_for_primary_unique_reads 62831905 0 0 0 0 0 0 0 62831905 0 100.0 nan 62831905 0 31340177 0 31491728 0 60813814 0 96.79 nan 60813814 0 2018091 0 3.21 nan 0 0 0 0 62831905 G177REL15_M5_statistics_for_all_accepted_reads 92538656 0 14549046 0 0 0 0 0 92538656 0 100.0 nan 77989610 0 38851567 0 39138043 0 72375502 0 92.8 nan 72375502 0 5614108 0 7.2 nan 0 0 0 0 92538656 G177REL15_M5_statistics_for_primary_reads 77989610 0 0 0 0 0 0 0 77989610 0 100.0 nan 77989610 0 38851567 0 39138043 0 72375502 0 92.8 nan 72375502 0 5614108 0 7.2 nan 0 0 0 0 77989610 G177REL15_M5_statistics_for_primary_unique_reads 69187386 0 0 0 0 0 0 0 69187386 0 100.0 nan 69187386 0 34520479 0 34666907 0 66871234 0 96.65 nan 66871234 0 2316152 0 3.35 nan 0 0 0 0 69187386 G177REL15_M6_statistics_for_all_accepted_reads 87664684 0 13055443 0 0 0 0 0 87664684 0 100.0 nan 74609241 0 37156710 0 37452531 0 69477584 0 93.12 nan 69477584 0 5131657 0 6.88 nan 0 0 0 0 87664684 G177REL15_M6_statistics_for_primary_reads 74609241 0 0 0 0 0 0 0 74609241 0 100.0 nan 74609241 0 37156710 0 37452531 0 69477584 0 93.12 nan 69477584 0 5131657 0 6.88 nan 0 0 0 0 74609241 G177REL15_M6_statistics_for_primary_unique_reads 66563651 0 0 0 0 0 0 0 66563651 0 100.0 nan 66563651 0 33201250 0 33362401 0 64438888 0 96.81 nan 64438888 0 2124763 0 3.19 nan 0 0 0 0 66563651 G177REL15_M7_statistics_for_all_accepted_reads 88429698 0 13020902 0 0 0 0 0 88429698 0 100.0 nan 75408796 0 37520794 0 37888002 0 69758256 0 92.51 nan 69758256 0 5650540 0 7.49 nan 0 0 0 0 88429698 G177REL15_M7_statistics_for_primary_reads 75408796 0 0 0 0 0 0 0 75408796 0 100.0 nan 75408796 0 37520794 0 37888002 0 69758256 0 92.51 nan 69758256 0 5650540 0 7.49 nan 0 0 0 0 75408796 G177REL15_M7_statistics_for_primary_unique_reads 67276257 0 0 0 0 0 0 0 67276257 0 100.0 nan 67276257 0 33573583 0 33702674 0 64924820 0 96.5 nan 64924820 0 2351437 0 3.5 nan 0 0 0 0 67276257 G177REL15_M8_statistics_for_all_accepted_reads 77151229 0 11050662 0 0 0 0 0 77151229 0 100.0 nan 66100567 0 32947782 0 33152785 0 61223650 0 92.62 nan 61223650 0 4876917 0 7.38 nan 0 0 0 0 77151229 G177REL15_M8_statistics_for_primary_reads 66100567 0 0 0 0 0 0 0 66100567 0 100.0 nan 66100567 0 32947782 0 33152785 0 61223650 0 92.62 nan 61223650 0 4876917 0 7.38 nan 0 0 0 0 66100567 G177REL15_M8_statistics_for_primary_unique_reads 59178601 0 0 0 0 0 0 0 59178601 0 100.0 nan 59178601 0 29560490 0 29618111 0 57263152 0 96.76 nan 57263152 0 1915449 0 3.24 nan 0 0 0 0 59178601 G177REL15_M9_statistics_for_all_accepted_reads 43488574 0 5600705 0 0 0 0 0 43488574 0 100.0 nan 37887869 0 18846055 0 19041814 0 35491344 0 93.67 nan 35491344 0 2396525 0 6.33 nan 0 0 0 0 43488574 G177REL15_M9_statistics_for_primary_reads 37887869 0 0 0 0 0 0 0 37887869 0 100.0 nan 37887869 0 18846055 0 19041814 0 35491344 0 93.67 nan 35491344 0 2396525 0 6.33 nan 0 0 0 0 37887869 G177REL15_M9_statistics_for_primary_unique_reads 34313946 0 0 0 0 0 0 0 34313946 0 100.0 nan 34313946 0 17095582 0 17218364 0 33243056 0 96.88 nan 33243056 0 1070890 0 3.12 nan 0 0 0 0 34313946