Sample STAR_mqc-generalstats-star-uniquely_mapped_percent STAR_mqc-generalstats-star-uniquely_mapped Picard_mqc-generalstats-picard-PCT_RIBOSOMAL_BASES Picard_mqc-generalstats-picard-PCT_MRNA_BASES Picard_mqc-generalstats-picard-summed_median Picard_mqc-generalstats-picard-summed_mean featureCounts_mqc-generalstats-featurecounts-percent_assigned featureCounts_mqc-generalstats-featurecounts-Assigned Samtools_mqc-generalstats-samtools-flagstat_total Samtools_mqc-generalstats-samtools-mapped_passed fastp_mqc-generalstats-fastp-pct_duplication fastp_mqc-generalstats-fastp-after_filtering_q30_rate fastp_mqc-generalstats-fastp-after_filtering_q30_bases fastp_mqc-generalstats-fastp-after_filtering_gc_content fastp_mqc-generalstats-fastp-pct_surviving fastp_mqc-generalstats-fastp-pct_adapter FastQC_mqc-generalstats-fastqc-percent_duplicates FastQC_mqc-generalstats-fastqc-percent_gc FastQC_mqc-generalstats-fastqc-avg_sequence_length FastQC_mqc-generalstats-fastqc-percent_fails FastQC_mqc-generalstats-fastqc-total_sequences G224_M01_G224_M01 39.33 4010217.0 G224_M01_primary_unique 0.7412 90.0003 273 571.050546 G224_M01_sorted 92.91803015915636 5263510 G224_M01_statistics_for_all_accepted_reads 11959214 11959214 G224_M01_statistics_for_primary_reads 9349754 9349754 G224_M01_statistics_for_primary_unique_reads 8020434 8020434 G224_M02Dup_G224_M02Dup 61.61 5664681.0 G224_M02Dup_sorted 92.91803015915636 5263510 G224_M02Dup_statistics_for_all_accepted_reads 16031782 16031782 G224_M02Dup_statistics_for_primary_reads 12955898 12955898 G224_M02Dup_statistics_for_primary_unique_reads 11329362 11329362 G224_M02_CKDL240018118-1A_HH7TVDSXC_L2_1 27.1376 0.929777 2379022302.0 0.477256 96.82346549724204 21.52924676415135 74.94300866039548 48.0 150.0 18.181818181818183 9194265.0 G224_M02_CKDL240018118-1A_HH7TVDSXC_L2_2 74.36698046769844 48.0 150.0 27.27272727272727 9194265.0 G224_M02_G224_M02 61.61 5664681.0 G224_M02_primary_unique 0.7412 90.0003 273 571.050546 G224_M02_sorted 92.91803015915636 5263510 G224_M02_statistics_for_all_accepted_reads 16031782 16031782 G224_M02_statistics_for_primary_reads 12955898 12955898 G224_M02_statistics_for_primary_unique_reads 11329362 11329362 G224_M03_CKDL240018118-1A_HH7TVDSXC_L2_1 23.358400000000003 0.92446 1965435073.0 0.460205 97.1217948988057 35.1879056394101 71.3378310603612 46.0 150.0 27.27272727272727 7831617.0 G224_M03_CKDL240018118-1A_HH7TVDSXC_L2_2 72.22767469367373 46.0 150.0 27.27272727272727 7831617.0 G224_M03_G224_M03 64.98 5089370.0 G224_M03_primary_unique 0.44320000000000004 83.4646 195 277.004791 G224_M03_sorted 87.28538109824989 4442276 G224_M03_statistics_for_all_accepted_reads 14640106 14640106 G224_M03_statistics_for_primary_reads 12054464 12054464 G224_M03_statistics_for_primary_unique_reads 10178740 10178740 G224_M04_CKDL240018118-1A_HH7TVDSXC_L2_1 27.0227 0.927631 1987268061.0 0.460016 97.3071541118604 33.77684405306385 73.947015475539 46.0 150.0 27.27272727272727 7825290.0 G224_M04_CKDL240018118-1A_HH7TVDSXC_L2_2 74.59594057839675 46.0 150.0 27.27272727272727 7825290.0 G224_M04_G224_M04 62.78 4912545.0 G224_M04_primary_unique 0.6066 84.5513 205 327.866304 G224_M04_sorted 87.78217807674027 4312339 G224_M04_statistics_for_all_accepted_reads 14436634 14436634 G224_M04_statistics_for_primary_reads 11621192 11621192 G224_M04_statistics_for_primary_unique_reads 9825090 9825090 G224_M05_CKDL240018118-1A_HH7TVDSXC_L2_1 11.1432 0.917195 1889141868.0 0.447213 96.3889017633736 41.335137273319376 44.26318082965383 45.0 150.0 9.090909090909092 7788877.0 G224_M05_CKDL240018118-1A_HH7TVDSXC_L2_2 44.93932358952265 45.0 150.0 18.181818181818183 7788877.0 G224_M05_G224_M05 67.12 5228024.0 G224_M05_primary_unique 1.2083 59.2617 180 209.976015 G224_M05_sorted 91.20378942407304 4768156 G224_M05_statistics_for_all_accepted_reads 12208306 12208306 G224_M05_statistics_for_primary_reads 11011552 11011552 G224_M05_statistics_for_primary_unique_reads 10456048 10456048 G224_M06_CKDL240018118-1A_HH7TVDSXC_L2_1 16.8276 0.920397 3707800745.0 0.446112 97.01193584212848 36.5232497599614 56.747684902803904 45.0 150.0 18.181818181818183 14889272.0 G224_M06_CKDL240018118-1A_HH7TVDSXC_L2_2 57.24060139832313 45.0 150.0 27.27272727272727 14889272.0 G224_M06_G224_M06 66.27 9866417.0 G224_M06_primary_unique 1.3844 68.2927 187 225.82986100000002 G224_M06_sorted 91.69794870822913 9047302 G224_M06_statistics_for_all_accepted_reads 24784322 24784322 G224_M06_statistics_for_primary_reads 21199782 21199782 G224_M06_statistics_for_primary_unique_reads 19732834 19732834 G224_M07_CKDL240018118-1A_HH7TVDSXC_L2_1 8.89668 0.909362 2201162868.0 0.425215 93.22247138199631 38.17674291406615 44.3635461398842 44.0 150.0 18.181818181818183 9463361.0 G224_M07_CKDL240018118-1A_HH7TVDSXC_L2_2 42.80327335337171 44.0 150.0 9.090909090909092 9463361.0 G224_M07_G224_M07 66.06 6251738.0 G224_M07_primary_unique 0.6348 49.774499999999996 179 201.22474400000002 G224_M07_sorted 91.47908949479329 5719033 G224_M07_statistics_for_all_accepted_reads 14141824 14141824 G224_M07_statistics_for_primary_reads 13051900 13051900 G224_M07_statistics_for_primary_unique_reads 12503476 12503476 G224_M08_CKDL240018118-1A_HH7TVDSXC_L2_1 10.0594 0.916047 3092129229.0 0.446681 96.64201022491461 39.87778057568303 47.94182029118639 45.0 150.0 9.090909090909092 12711891.0 G224_M08_CKDL240018118-1A_HH7TVDSXC_L2_2 47.19788247891289 45.0 150.0 18.181818181818183 12711891.0 G224_M08_G224_M08 68.94 8763943.0 G224_M08_primary_unique 0.7178 62.8186 182 215.13814 G224_M08_sorted 92.09182442195254 8070875 G224_M08_statistics_for_all_accepted_reads 20240428 20240428 G224_M08_statistics_for_primary_reads 18403652 18403652 G224_M08_statistics_for_primary_unique_reads 17527886 17527886 G224_M09_CKDL240018118-1A_HH7TVDSXC_L2_1 14.133000000000001 0.900038 1420183733.0 0.523792 85.72552061065034 43.18084192286253 54.341172865652105 54.0 150.0 36.36363636363637 6990973.0 G224_M09_CKDL240018118-1A_HH7TVDSXC_L2_2 47.41833438928803 55.0 150.0 18.181818181818183 6990973.0 G224_M09_G224_M09 46.05 3219056.0 G224_M09_primary_unique 19.8028 29.5787 165 181.992431 G224_M09_sorted 61.32841429288587 1974196 G224_M09_statistics_for_all_accepted_reads 7626418 7626418 G224_M09_statistics_for_primary_reads 6867198 6867198 G224_M09_statistics_for_primary_unique_reads 6438112 6438112 G224_M10_CKDL240018118-1A_HH7TVDSXC_L2_1 8.792819999999999 0.888922 1739916548.0 0.436117 87.98330001584634 47.33121552520448 38.643852202881 46.0 150.0 18.181818181818183 8462523.0 G224_M10_CKDL240018118-1A_HH7TVDSXC_L2_2 37.444152991045776 46.0 150.0 27.27272727272727 8462523.0 G224_M10_G224_M10 50.89 4306634.0 G224_M10_primary_unique 2.7566 24.2009 163 178.798174 G224_M10_sorted 78.89463093450709 3397703 G224_M10_statistics_for_all_accepted_reads 9840586 9840586 G224_M10_statistics_for_primary_reads 9008450 9008450 G224_M10_statistics_for_primary_unique_reads 8613268 8613268 G224_M11Dup_G224_M11Dup 69.67 3971734.0 G224_M11Dup_sorted 65.21018275644845 2589975 G224_M11Dup_statistics_for_all_accepted_reads 8850080 8850080 G224_M11Dup_statistics_for_primary_reads 8271504 8271504 G224_M11Dup_statistics_for_primary_unique_reads 7943468 7943468 G224_M11_CKDL240018118-1A_HH7TVDSXC_L2_1 8.49124 0.881432 1316243617.0 0.436367 91.00928168875477 20.121956032887187 32.86326975429367 45.0 150.0 18.181818181818183 5700579.0 G224_M11_CKDL240018118-1A_HH7TVDSXC_L2_2 32.56761111584434 44.0 150.0 36.36363636363637 5700579.0 G224_M11_G224_M11 69.67 3971734.0 G224_M11_primary_unique 1.6389 23.4867 222 255.353348 G224_M11_sorted 65.21018275644845 2589975 G224_M11_statistics_for_all_accepted_reads 8850080 8850080 G224_M11_statistics_for_primary_reads 8271504 8271504 G224_M11_statistics_for_primary_unique_reads 7943468 7943468 G224_M12_G224_M12 45.2 3883291.0 G224_M12_primary_unique 1.6389 23.4867 222 255.353348 G224_M12_sorted 65.21018275644845 2589975 G224_M12_statistics_for_all_accepted_reads 8738320 8738320 G224_M12_statistics_for_primary_reads 8090240 8090240 G224_M12_statistics_for_primary_unique_reads 7766582 7766582 G224_M13Dup_G224_M13Dup 66.73 4038678.0 G224_M13Dup_sorted 90.3751425590255 3649961 G224_M13Dup_statistics_for_all_accepted_reads 7365830 7365830 G224_M13Dup_statistics_for_primary_reads 5051074 5051074 G224_M13Dup_statistics_for_primary_unique_reads 4038678 4038678 G224_M13_CKDL240018118-1A_HH7TVDSXC_L2_1 22.6631 0.928826 1494674095.0 0.467103 98.31803904936923 44.967193963286114 69.4186513013444 47.0 150.0 18.181818181818183 6052697.0 G224_M13_CKDL240018118-1A_HH7TVDSXC_L2_2 70.60676416549805 47.0 150.0 27.27272727272727 6052697.0 G224_M13_G224_M13 57.63 3487995.0 G224_M13_primary_unique 0.6204000000000001 85.578 197 318.58018 G224_M13_sorted 89.27687683038536 3113973 G224_M13_statistics_for_all_accepted_reads 10151090 10151090 G224_M13_statistics_for_primary_reads 8094054 8094054 G224_M13_statistics_for_primary_unique_reads 6975990 6975990 G224_M14Dup_G224_M14Dup 62.46 4470182.0 G224_M14Dup_sorted 87.02334714783426 3890102 G224_M14Dup_statistics_for_all_accepted_reads 12531710 12531710 G224_M14Dup_statistics_for_primary_reads 10418624 10418624 G224_M14Dup_statistics_for_primary_unique_reads 8940364 8940364 G224_M14_CKDL240018118-1A_HH7TVDSXC_L2_1 21.1888 0.926558 1776276876.0 0.464247 98.48638286694722 43.665895411028956 68.6807641822736 46.0 150.0 18.181818181818183 7157160.0 G224_M14_CKDL240018118-1A_HH7TVDSXC_L2_2 70.07945622396522 47.0 150.0 18.181818181818183 7157160.0 G224_M14_G224_M14 62.46 4470182.0 G224_M14_primary_unique 0.6446000000000001 86.9537 188 272.164064 G224_M14_sorted 90.3751425590255 3649961 G224_M14_statistics_for_all_accepted_reads 12531710 12531710 G224_M14_statistics_for_primary_reads 10418624 10418624 G224_M14_statistics_for_primary_unique_reads 8940364 8940364 G224_M15_G224_M15 62.46 4470182.0 G224_M15_primary_unique 0.41900000000000004 83.1733 188 272.164064 G224_M15_sorted 87.02334714783426 3890102 G224_M15_statistics_for_all_accepted_reads 12531710 12531710 G224_M15_statistics_for_primary_reads 10418624 10418624 G224_M15_statistics_for_primary_unique_reads 8940364 8940364 G224_M16_G224_M16 62.46 4470182.0 G224_M16_primary_unique 0.41900000000000004 83.1733 188 272.164064 G224_M16_sorted 87.02334714783426 3890102 G224_M16_statistics_for_all_accepted_reads 12531710 12531710 G224_M16_statistics_for_primary_reads 10418624 10418624 G224_M16_statistics_for_primary_unique_reads 8940364 8940364 statistics_for_primary_unique_reads 8940364 8940364