[2024-07-19 16:46:57,700] multiqc [DEBUG ] This is MultiQC v1.11 [2024-07-19 16:46:57,700] multiqc [DEBUG ] No MultiQC config found: /projectnb/wax-es/routines/condaenv/multiqc/lib/python3.9/site-packages/multiqc_config.yaml [2024-07-19 16:46:57,700] multiqc [DEBUG ] No MultiQC config found: /usr2/collab/mpyatkov/.multiqc_config.yaml [2024-07-19 16:46:57,701] multiqc [DEBUG ] No MultiQC config found: multiqc_config.yaml [2024-07-19 16:46:57,701] multiqc [DEBUG ] Loading config settings from: /projectnb2/wax-dk/max/G227/Scripts/14_final_summary/Scripts/multiqc_config.yaml [2024-07-19 16:46:57,701] multiqc [DEBUG ] New config 'table_columns_visible': {'FastQC': {'percent_duplicates': False}} [2024-07-19 16:46:57,702] multiqc [DEBUG ] Command used: /projectnb/wax-es/routines/condaenv/multiqc/bin/multiqc --no-ansi -c /projectnb2/wax-dk/max/G227/Scripts/14_final_summary/Scripts/multiqc_config.yaml /projectnb/wax-dk/max/G227/SAMPLES /projectnb2/wax-dk/max/G227/Scripts/03_FASTQC/ /projectnb2/wax-dk/max/G227/Scripts/06_CollectMetrics/ [2024-07-19 16:46:58,489] multiqc [WARNING] MultiQC Version v1.23 now available! [2024-07-19 16:46:58,489] multiqc [DEBUG ] Command : /projectnb/wax-es/routines/condaenv/multiqc/bin/multiqc --no-ansi -c /projectnb2/wax-dk/max/G227/Scripts/14_final_summary/Scripts/multiqc_config.yaml /projectnb/wax-dk/max/G227/SAMPLES /projectnb2/wax-dk/max/G227/Scripts/03_FASTQC/ /projectnb2/wax-dk/max/G227/Scripts/06_CollectMetrics/ [2024-07-19 16:46:58,489] multiqc [DEBUG ] Working dir : /projectnb/wax-dk/max/G227/Scripts/14_final_summary/G227_RELAXPARAMS_multiqc_report [2024-07-19 16:46:58,489] multiqc [DEBUG ] Template : default [2024-07-19 16:46:58,489] multiqc [DEBUG ] Running Python 3.9.6 | packaged by conda-forge | (default, Jul 11 2021, 03:39:48) [GCC 9.3.0] [2024-07-19 16:46:58,490] multiqc [DEBUG ] Analysing modules: custom_content, ccs, ngsderive, purple, conpair, lima, peddy, somalier, methylQA, mosdepth, phantompeakqualtools, qualimap, preseq, quast, qorts, rna_seqc, rockhopper, rsem, rseqc, busco, bustools, goleft_indexcov, gffcompare, disambiguate, supernova, deeptools, sargasso, verifybamid, mirtrace, happy, mirtop, sambamba, homer, hops, macs2, theta2, snpeff, gatk, htseq, bcftools, featureCounts, fgbio, dragen, dedup, damageprofiler, biobambam2, jcvi, mtnucratio, picard, vep, sentieon, prokka, qc3C, nanostat, samblaster, samtools, sexdeterrmine, eigenstratdatabasetools, bamtools, jellyfish, vcftools, longranger, stacks, varscan2, snippy, bbmap, bismark, biscuit, hicexplorer, hicup, hicpro, salmon, kallisto, slamdunk, star, hisat2, tophat, bowtie2, bowtie1, snpsplit, odgi, pangolin, kat, leehom, adapterRemoval, clipandmerge, cutadapt, flexbar, kaiju, kraken, malt, trimmomatic, sickle, skewer, sortmerna, biobloomtools, fastq_screen, afterqc, fastp, fastqc, pychopper, pycoqc, minionqc, multivcfanalyzer, clusterflow, bcl2fastq, bclconvert, interop, ivar, flash, seqyclean, optitype [2024-07-19 16:46:58,498] multiqc [DEBUG ] Using temporary directory for creating report: /scratch/tmp6y325es2 [2024-07-19 16:46:58,587] multiqc [INFO ] Search path : /projectnb/wax-dk/max/G227/SAMPLES [2024-07-19 16:46:58,587] multiqc [INFO ] Search path : /projectnb2/wax-dk/max/G227/Scripts/03_FASTQC [2024-07-19 16:46:58,587] multiqc [INFO ] Search path : /projectnb2/wax-dk/max/G227/Scripts/06_CollectMetrics [2024-07-19 16:46:59,167] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G227_M05_CKDL240023967-1A_22NF25LT3_L5_2.fq.gz [2024-07-19 16:46:59,167] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G227_M05_CKDL240023967-1A_22NF25LT3_L5_1.fq.gz [2024-07-19 16:46:59,199] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G227_M05_primary_unique.bam.bai [2024-07-19 16:46:59,236] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G227_M05_primary_unique.bam [2024-07-19 16:46:59,263] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G227_M05_metrics [2024-07-19 16:46:59,265] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G227_M05_metrics [2024-07-19 16:46:59,265] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G227_M05_metrics [2024-07-19 16:46:59,265] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G227_M05_metrics [2024-07-19 16:46:59,269] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G227_M05_metrics [2024-07-19 16:46:59,280] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G227_M05_hist.pdf [2024-07-19 16:46:59,339] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G227_M05_featureCounts.out [2024-07-19 16:46:59,341] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G227_M05_featureCounts.out [2024-07-19 16:46:59,342] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G227_M05_featureCounts.out [2024-07-19 16:46:59,342] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G227_M05_featureCounts.out [2024-07-19 16:46:59,346] multiqc [DEBUG ] File ignored by vep/vep_html because it exceeded search pattern filesize limit: G227_M05_featureCounts.out [2024-07-19 16:46:59,346] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G227_M05_featureCounts.out [2024-07-19 16:46:59,346] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G227_M05_featureCounts.out [2024-07-19 16:46:59,346] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: G227_M05_featureCounts.out [2024-07-19 16:46:59,346] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: G227_M05_featureCounts.out [2024-07-19 16:46:59,346] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: G227_M05_featureCounts.out [2024-07-19 16:46:59,346] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: G227_M05_featureCounts.out [2024-07-19 16:46:59,346] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: G227_M05_featureCounts.out [2024-07-19 16:46:59,366] multiqc [DEBUG ] File ignored by stacks/sumstats because it exceeded search pattern filesize limit: G227_M05_featureCounts.out [2024-07-19 16:47:00,244] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G227_M05_featureCounts.out [2024-07-19 16:47:00,246] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G227_M05_featureCounts.out [2024-07-19 16:47:00,247] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G227_M05_featureCounts.out [2024-07-19 16:47:00,247] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G227_M05_featureCounts.out [2024-07-19 16:47:00,251] multiqc [DEBUG ] File ignored by vep/vep_html because it exceeded search pattern filesize limit: G227_M05_featureCounts.out [2024-07-19 16:47:00,251] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G227_M05_featureCounts.out [2024-07-19 16:47:00,251] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G227_M05_featureCounts.out [2024-07-19 16:47:00,251] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: G227_M05_featureCounts.out [2024-07-19 16:47:00,251] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: G227_M05_featureCounts.out [2024-07-19 16:47:00,251] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: G227_M05_featureCounts.out [2024-07-19 16:47:00,252] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: G227_M05_featureCounts.out [2024-07-19 16:47:00,252] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: G227_M05_featureCounts.out [2024-07-19 16:47:00,272] multiqc [DEBUG ] File ignored by stacks/sumstats because it exceeded search pattern filesize limit: G227_M05_featureCounts.out [2024-07-19 16:47:01,137] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G227_M05_metrics [2024-07-19 16:47:01,139] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G227_M05_metrics [2024-07-19 16:47:01,142] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G227_M05_metrics [2024-07-19 16:47:01,180] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G227_M06_CKDL240023967-1A_22NF25LT3_L5_1.fq.gz [2024-07-19 16:47:01,180] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G227_M06_CKDL240023967-1A_22NF25LT3_L5_2.fq.gz [2024-07-19 16:47:01,194] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G227_M06_primary_unique.bam.bai [2024-07-19 16:47:01,258] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G227_M06_primary_unique.bam [2024-07-19 16:47:01,258] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G227_M06_hist.pdf [2024-07-19 16:47:01,275] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G227_M06_metrics [2024-07-19 16:47:01,277] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G227_M06_metrics [2024-07-19 16:47:01,277] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G227_M06_metrics [2024-07-19 16:47:01,277] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G227_M06_metrics [2024-07-19 16:47:01,281] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G227_M06_metrics [2024-07-19 16:47:01,320] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G227_M06_featureCounts.out [2024-07-19 16:47:01,322] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G227_M06_featureCounts.out [2024-07-19 16:47:01,323] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G227_M06_featureCounts.out [2024-07-19 16:47:01,323] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G227_M06_featureCounts.out [2024-07-19 16:47:01,326] multiqc [DEBUG ] File ignored by vep/vep_html because it exceeded search pattern filesize limit: G227_M06_featureCounts.out [2024-07-19 16:47:01,326] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G227_M06_featureCounts.out [2024-07-19 16:47:01,326] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G227_M06_featureCounts.out [2024-07-19 16:47:01,327] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: G227_M06_featureCounts.out [2024-07-19 16:47:01,327] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: G227_M06_featureCounts.out [2024-07-19 16:47:01,327] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: G227_M06_featureCounts.out [2024-07-19 16:47:01,327] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: G227_M06_featureCounts.out [2024-07-19 16:47:01,327] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: G227_M06_featureCounts.out [2024-07-19 16:47:01,345] multiqc [DEBUG ] File ignored by stacks/sumstats because it exceeded search pattern filesize limit: G227_M06_featureCounts.out [2024-07-19 16:47:02,214] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G227_M06_featureCounts.out [2024-07-19 16:47:02,216] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G227_M06_featureCounts.out [2024-07-19 16:47:02,216] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G227_M06_featureCounts.out [2024-07-19 16:47:02,216] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G227_M06_featureCounts.out [2024-07-19 16:47:02,220] multiqc [DEBUG ] File ignored by vep/vep_html because it exceeded search pattern filesize limit: G227_M06_featureCounts.out [2024-07-19 16:47:02,220] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G227_M06_featureCounts.out [2024-07-19 16:47:02,220] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G227_M06_featureCounts.out [2024-07-19 16:47:02,220] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: G227_M06_featureCounts.out [2024-07-19 16:47:02,220] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: G227_M06_featureCounts.out [2024-07-19 16:47:02,220] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: G227_M06_featureCounts.out [2024-07-19 16:47:02,220] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: G227_M06_featureCounts.out [2024-07-19 16:47:02,220] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: G227_M06_featureCounts.out [2024-07-19 16:47:02,240] multiqc [DEBUG ] File ignored by stacks/sumstats because it exceeded search pattern filesize limit: G227_M06_featureCounts.out [2024-07-19 16:47:03,093] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G227_M06_metrics [2024-07-19 16:47:03,095] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G227_M06_metrics [2024-07-19 16:47:03,097] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G227_M06_metrics [2024-07-19 16:47:03,123] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G227_M07_CKDL240023967-1A_22NF25LT3_L5_1.fq.gz [2024-07-19 16:47:03,123] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G227_M07_CKDL240023967-1A_22NF25LT3_L5_2.fq.gz [2024-07-19 16:47:03,135] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G227_M07_primary_unique.bam.bai [2024-07-19 16:47:03,186] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G227_M07_primary_unique.bam [2024-07-19 16:47:03,186] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G227_M07_hist.pdf [2024-07-19 16:47:03,189] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G227_M07_metrics [2024-07-19 16:47:03,190] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G227_M07_metrics [2024-07-19 16:47:03,191] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G227_M07_metrics [2024-07-19 16:47:03,191] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G227_M07_metrics [2024-07-19 16:47:03,193] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G227_M07_metrics [2024-07-19 16:47:03,224] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G227_M07_featureCounts.out [2024-07-19 16:47:03,226] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G227_M07_featureCounts.out [2024-07-19 16:47:03,226] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G227_M07_featureCounts.out [2024-07-19 16:47:03,226] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G227_M07_featureCounts.out [2024-07-19 16:47:03,229] multiqc [DEBUG ] File ignored by vep/vep_html because it exceeded search pattern filesize limit: G227_M07_featureCounts.out [2024-07-19 16:47:03,229] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G227_M07_featureCounts.out [2024-07-19 16:47:03,229] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G227_M07_featureCounts.out [2024-07-19 16:47:03,229] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: G227_M07_featureCounts.out [2024-07-19 16:47:03,229] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: G227_M07_featureCounts.out [2024-07-19 16:47:03,229] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: G227_M07_featureCounts.out [2024-07-19 16:47:03,229] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: G227_M07_featureCounts.out [2024-07-19 16:47:03,229] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: G227_M07_featureCounts.out [2024-07-19 16:47:03,250] multiqc [DEBUG ] File ignored by stacks/sumstats because it exceeded search pattern filesize limit: G227_M07_featureCounts.out [2024-07-19 16:47:04,128] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G227_M07_featureCounts.out [2024-07-19 16:47:04,131] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G227_M07_featureCounts.out [2024-07-19 16:47:04,131] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G227_M07_featureCounts.out [2024-07-19 16:47:04,131] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G227_M07_featureCounts.out [2024-07-19 16:47:04,136] multiqc [DEBUG ] File ignored by vep/vep_html because it exceeded search pattern filesize limit: G227_M07_featureCounts.out [2024-07-19 16:47:04,136] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G227_M07_featureCounts.out [2024-07-19 16:47:04,137] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G227_M07_featureCounts.out [2024-07-19 16:47:04,137] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: G227_M07_featureCounts.out [2024-07-19 16:47:04,137] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: G227_M07_featureCounts.out [2024-07-19 16:47:04,137] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: G227_M07_featureCounts.out [2024-07-19 16:47:04,137] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: G227_M07_featureCounts.out [2024-07-19 16:47:04,137] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: G227_M07_featureCounts.out [2024-07-19 16:47:04,158] multiqc [DEBUG ] File ignored by stacks/sumstats because it exceeded search pattern filesize limit: G227_M07_featureCounts.out [2024-07-19 16:47:05,016] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G227_M07_metrics [2024-07-19 16:47:05,019] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G227_M07_metrics [2024-07-19 16:47:05,023] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G227_M07_metrics [2024-07-19 16:47:05,070] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G227_M08_CKDL240023967-1A_22NF25LT3_L5_1.fq.gz [2024-07-19 16:47:05,072] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G227_M08_CKDL240023967-1A_22NF25LT3_L5_2.fq.gz [2024-07-19 16:47:05,124] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G227_M08_primary_unique.bam [2024-07-19 16:47:05,124] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G227_M08_primary_unique.bam.bai [2024-07-19 16:47:05,137] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G227_M08_hist.pdf [2024-07-19 16:47:05,140] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G227_M08_metrics [2024-07-19 16:47:05,141] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G227_M08_metrics [2024-07-19 16:47:05,142] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G227_M08_metrics [2024-07-19 16:47:05,142] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G227_M08_metrics [2024-07-19 16:47:05,144] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G227_M08_metrics [2024-07-19 16:47:05,189] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G227_M08_featureCounts.out [2024-07-19 16:47:05,191] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G227_M08_featureCounts.out [2024-07-19 16:47:05,191] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G227_M08_featureCounts.out [2024-07-19 16:47:05,191] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G227_M08_featureCounts.out [2024-07-19 16:47:05,194] multiqc [DEBUG ] File ignored by vep/vep_html because it exceeded search pattern filesize limit: G227_M08_featureCounts.out [2024-07-19 16:47:05,194] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G227_M08_featureCounts.out [2024-07-19 16:47:05,194] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G227_M08_featureCounts.out [2024-07-19 16:47:05,195] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: G227_M08_featureCounts.out [2024-07-19 16:47:05,195] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: G227_M08_featureCounts.out [2024-07-19 16:47:05,195] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: G227_M08_featureCounts.out [2024-07-19 16:47:05,195] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: G227_M08_featureCounts.out [2024-07-19 16:47:05,195] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: G227_M08_featureCounts.out [2024-07-19 16:47:05,213] multiqc [DEBUG ] File ignored by stacks/sumstats because it exceeded search pattern filesize limit: G227_M08_featureCounts.out [2024-07-19 16:47:06,137] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G227_M08_featureCounts.out [2024-07-19 16:47:06,139] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G227_M08_featureCounts.out [2024-07-19 16:47:06,139] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G227_M08_featureCounts.out [2024-07-19 16:47:06,139] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G227_M08_featureCounts.out [2024-07-19 16:47:06,144] multiqc [DEBUG ] File ignored by vep/vep_html because it exceeded search pattern filesize limit: G227_M08_featureCounts.out [2024-07-19 16:47:06,144] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G227_M08_featureCounts.out [2024-07-19 16:47:06,144] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G227_M08_featureCounts.out [2024-07-19 16:47:06,144] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: G227_M08_featureCounts.out [2024-07-19 16:47:06,144] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: G227_M08_featureCounts.out [2024-07-19 16:47:06,144] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: G227_M08_featureCounts.out [2024-07-19 16:47:06,144] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: G227_M08_featureCounts.out [2024-07-19 16:47:06,144] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: G227_M08_featureCounts.out [2024-07-19 16:47:06,175] multiqc [DEBUG ] File ignored by stacks/sumstats because it exceeded search pattern filesize limit: G227_M08_featureCounts.out [2024-07-19 16:47:07,031] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G227_M08_metrics [2024-07-19 16:47:07,034] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G227_M08_metrics [2024-07-19 16:47:07,041] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G227_M08_metrics [2024-07-19 16:47:07,078] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G227_M09_CKDL240023967-1A_22NF25LT3_L5_1.fq.gz [2024-07-19 16:47:07,080] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G227_M09_CKDL240023967-1A_22NF25LT3_L5_2.fq.gz [2024-07-19 16:47:07,117] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G227_M09_primary_unique.bam.bai [2024-07-19 16:47:07,171] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G227_M09_primary_unique.bam [2024-07-19 16:47:07,171] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G227_M09_hist.pdf [2024-07-19 16:47:07,194] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G227_M09_metrics [2024-07-19 16:47:07,197] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G227_M09_metrics [2024-07-19 16:47:07,197] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G227_M09_metrics [2024-07-19 16:47:07,197] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G227_M09_metrics [2024-07-19 16:47:07,203] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G227_M09_metrics [2024-07-19 16:47:07,267] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G227_M09_featureCounts.out [2024-07-19 16:47:07,270] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G227_M09_featureCounts.out [2024-07-19 16:47:07,270] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G227_M09_featureCounts.out [2024-07-19 16:47:07,271] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G227_M09_featureCounts.out [2024-07-19 16:47:07,276] multiqc [DEBUG ] File ignored by vep/vep_html because it exceeded search pattern filesize limit: G227_M09_featureCounts.out [2024-07-19 16:47:07,276] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G227_M09_featureCounts.out [2024-07-19 16:47:07,276] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G227_M09_featureCounts.out [2024-07-19 16:47:07,276] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: G227_M09_featureCounts.out [2024-07-19 16:47:07,276] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: G227_M09_featureCounts.out [2024-07-19 16:47:07,276] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: G227_M09_featureCounts.out [2024-07-19 16:47:07,276] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: G227_M09_featureCounts.out [2024-07-19 16:47:07,276] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: G227_M09_featureCounts.out [2024-07-19 16:47:07,296] multiqc [DEBUG ] File ignored by stacks/sumstats because it exceeded search pattern filesize limit: G227_M09_featureCounts.out [2024-07-19 16:47:08,165] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G227_M09_featureCounts.out [2024-07-19 16:47:08,168] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G227_M09_featureCounts.out [2024-07-19 16:47:08,168] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G227_M09_featureCounts.out [2024-07-19 16:47:08,168] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G227_M09_featureCounts.out [2024-07-19 16:47:08,174] multiqc [DEBUG ] File ignored by vep/vep_html because it exceeded search pattern filesize limit: G227_M09_featureCounts.out [2024-07-19 16:47:08,174] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G227_M09_featureCounts.out [2024-07-19 16:47:08,174] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G227_M09_featureCounts.out [2024-07-19 16:47:08,174] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: G227_M09_featureCounts.out [2024-07-19 16:47:08,174] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: G227_M09_featureCounts.out [2024-07-19 16:47:08,174] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: G227_M09_featureCounts.out [2024-07-19 16:47:08,174] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: G227_M09_featureCounts.out [2024-07-19 16:47:08,174] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: G227_M09_featureCounts.out [2024-07-19 16:47:08,195] multiqc [DEBUG ] File ignored by stacks/sumstats because it exceeded search pattern filesize limit: G227_M09_featureCounts.out [2024-07-19 16:47:09,024] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G227_M09_metrics [2024-07-19 16:47:09,026] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G227_M09_metrics [2024-07-19 16:47:09,031] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G227_M09_metrics [2024-07-19 16:47:09,076] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G227_M27_CKDL240023967-1A_22NF25LT3_L5_1.fq.gz [2024-07-19 16:47:09,078] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G227_M27_CKDL240023967-1A_22NF25LT3_L5_2.fq.gz [2024-07-19 16:47:09,114] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G227_M27_primary_unique.bam.bai [2024-07-19 16:47:09,135] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G227_M27_primary_unique.bam [2024-07-19 16:47:09,188] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G227_M27_metrics [2024-07-19 16:47:09,190] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G227_M27_metrics [2024-07-19 16:47:09,191] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G227_M27_metrics [2024-07-19 16:47:09,191] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G227_M27_metrics [2024-07-19 16:47:09,196] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G227_M27_metrics [2024-07-19 16:47:09,212] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G227_M27_hist.pdf [2024-07-19 16:47:09,236] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G227_M27_featureCounts.out [2024-07-19 16:47:09,238] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G227_M27_featureCounts.out [2024-07-19 16:47:09,239] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G227_M27_featureCounts.out [2024-07-19 16:47:09,239] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G227_M27_featureCounts.out [2024-07-19 16:47:09,243] multiqc [DEBUG ] File ignored by vep/vep_html because it exceeded search pattern filesize limit: G227_M27_featureCounts.out [2024-07-19 16:47:09,244] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G227_M27_featureCounts.out [2024-07-19 16:47:09,244] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G227_M27_featureCounts.out [2024-07-19 16:47:09,244] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: G227_M27_featureCounts.out [2024-07-19 16:47:09,244] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: G227_M27_featureCounts.out [2024-07-19 16:47:09,244] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: G227_M27_featureCounts.out [2024-07-19 16:47:09,244] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: G227_M27_featureCounts.out [2024-07-19 16:47:09,244] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: G227_M27_featureCounts.out [2024-07-19 16:47:09,263] multiqc [DEBUG ] File ignored by stacks/sumstats because it exceeded search pattern filesize limit: G227_M27_featureCounts.out [2024-07-19 16:47:10,119] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G227_M27_featureCounts.out [2024-07-19 16:47:10,122] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G227_M27_featureCounts.out [2024-07-19 16:47:10,122] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G227_M27_featureCounts.out [2024-07-19 16:47:10,122] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G227_M27_featureCounts.out [2024-07-19 16:47:10,127] multiqc [DEBUG ] File ignored by vep/vep_html because it exceeded search pattern filesize limit: G227_M27_featureCounts.out [2024-07-19 16:47:10,127] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G227_M27_featureCounts.out [2024-07-19 16:47:10,127] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G227_M27_featureCounts.out [2024-07-19 16:47:10,128] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: G227_M27_featureCounts.out [2024-07-19 16:47:10,128] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: G227_M27_featureCounts.out [2024-07-19 16:47:10,128] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: G227_M27_featureCounts.out [2024-07-19 16:47:10,128] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: G227_M27_featureCounts.out [2024-07-19 16:47:10,128] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: G227_M27_featureCounts.out [2024-07-19 16:47:10,149] multiqc [DEBUG ] File ignored by stacks/sumstats because it exceeded search pattern filesize limit: G227_M27_featureCounts.out [2024-07-19 16:47:10,999] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G227_M27_metrics [2024-07-19 16:47:11,001] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G227_M27_metrics [2024-07-19 16:47:11,006] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G227_M27_metrics [2024-07-19 16:47:11,041] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G227_M28_CKDL240023967-1A_22NF25LT3_L5_2.fq.gz [2024-07-19 16:47:11,044] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G227_M28_CKDL240023967-1A_22NF25LT3_L5_1.fq.gz [2024-07-19 16:47:11,123] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G227_M28_primary_unique.bam [2024-07-19 16:47:11,123] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G227_M28_primary_unique.bam.bai [2024-07-19 16:47:11,123] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G227_M28_hist.pdf [2024-07-19 16:47:11,142] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G227_M28_metrics [2024-07-19 16:47:11,143] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G227_M28_metrics [2024-07-19 16:47:11,144] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G227_M28_metrics [2024-07-19 16:47:11,144] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G227_M28_metrics [2024-07-19 16:47:11,147] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G227_M28_metrics [2024-07-19 16:47:11,176] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G227_M28_featureCounts.out [2024-07-19 16:47:11,178] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G227_M28_featureCounts.out [2024-07-19 16:47:11,178] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G227_M28_featureCounts.out [2024-07-19 16:47:11,179] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G227_M28_featureCounts.out [2024-07-19 16:47:11,183] multiqc [DEBUG ] File ignored by vep/vep_html because it exceeded search pattern filesize limit: G227_M28_featureCounts.out [2024-07-19 16:47:11,184] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G227_M28_featureCounts.out [2024-07-19 16:47:11,184] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G227_M28_featureCounts.out [2024-07-19 16:47:11,184] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: G227_M28_featureCounts.out [2024-07-19 16:47:11,184] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: G227_M28_featureCounts.out [2024-07-19 16:47:11,184] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: G227_M28_featureCounts.out [2024-07-19 16:47:11,184] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: G227_M28_featureCounts.out [2024-07-19 16:47:11,184] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: G227_M28_featureCounts.out [2024-07-19 16:47:11,207] multiqc [DEBUG ] File ignored by stacks/sumstats because it exceeded search pattern filesize limit: G227_M28_featureCounts.out [2024-07-19 16:47:12,078] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G227_M28_featureCounts.out [2024-07-19 16:47:12,081] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G227_M28_featureCounts.out [2024-07-19 16:47:12,081] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G227_M28_featureCounts.out [2024-07-19 16:47:12,081] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G227_M28_featureCounts.out [2024-07-19 16:47:12,085] multiqc [DEBUG ] File ignored by vep/vep_html because it exceeded search pattern filesize limit: G227_M28_featureCounts.out [2024-07-19 16:47:12,085] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G227_M28_featureCounts.out [2024-07-19 16:47:12,086] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G227_M28_featureCounts.out [2024-07-19 16:47:12,086] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: G227_M28_featureCounts.out [2024-07-19 16:47:12,086] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: G227_M28_featureCounts.out [2024-07-19 16:47:12,086] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: G227_M28_featureCounts.out [2024-07-19 16:47:12,086] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: G227_M28_featureCounts.out [2024-07-19 16:47:12,086] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: G227_M28_featureCounts.out [2024-07-19 16:47:12,105] multiqc [DEBUG ] File ignored by stacks/sumstats because it exceeded search pattern filesize limit: G227_M28_featureCounts.out [2024-07-19 16:47:12,990] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G227_M28_metrics [2024-07-19 16:47:12,992] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G227_M28_metrics [2024-07-19 16:47:12,994] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G227_M28_metrics [2024-07-19 16:47:13,024] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G227_M12_CKDL240023967-1A_22NF25LT3_L5_1.fq.gz [2024-07-19 16:47:13,027] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G227_M12_CKDL240023967-1A_22NF25LT3_L5_2.fq.gz [2024-07-19 16:47:13,103] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G227_M12_primary_unique.bam.bai [2024-07-19 16:47:13,103] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G227_M12_primary_unique.bam [2024-07-19 16:47:13,109] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G227_M12_metrics [2024-07-19 16:47:13,112] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G227_M12_metrics [2024-07-19 16:47:13,112] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G227_M12_metrics [2024-07-19 16:47:13,112] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G227_M12_metrics [2024-07-19 16:47:13,118] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G227_M12_metrics [2024-07-19 16:47:13,141] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G227_M12_hist.pdf [2024-07-19 16:47:13,181] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G227_M12_featureCounts.out [2024-07-19 16:47:13,184] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G227_M12_featureCounts.out [2024-07-19 16:47:13,184] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G227_M12_featureCounts.out [2024-07-19 16:47:13,184] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G227_M12_featureCounts.out [2024-07-19 16:47:13,188] multiqc [DEBUG ] File ignored by vep/vep_html because it exceeded search pattern filesize limit: G227_M12_featureCounts.out [2024-07-19 16:47:13,188] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G227_M12_featureCounts.out [2024-07-19 16:47:13,189] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G227_M12_featureCounts.out [2024-07-19 16:47:13,189] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: G227_M12_featureCounts.out [2024-07-19 16:47:13,189] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: G227_M12_featureCounts.out [2024-07-19 16:47:13,189] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: G227_M12_featureCounts.out [2024-07-19 16:47:13,189] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: G227_M12_featureCounts.out [2024-07-19 16:47:13,189] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: G227_M12_featureCounts.out [2024-07-19 16:47:13,209] multiqc [DEBUG ] File ignored by stacks/sumstats because it exceeded search pattern filesize limit: G227_M12_featureCounts.out [2024-07-19 16:47:14,146] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G227_M12_featureCounts.out [2024-07-19 16:47:14,149] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G227_M12_featureCounts.out [2024-07-19 16:47:14,166] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G227_M12_featureCounts.out [2024-07-19 16:47:14,166] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G227_M12_featureCounts.out [2024-07-19 16:47:14,171] multiqc [DEBUG ] File ignored by vep/vep_html because it exceeded search pattern filesize limit: G227_M12_featureCounts.out [2024-07-19 16:47:14,171] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G227_M12_featureCounts.out [2024-07-19 16:47:14,171] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G227_M12_featureCounts.out [2024-07-19 16:47:14,171] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: G227_M12_featureCounts.out [2024-07-19 16:47:14,171] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: G227_M12_featureCounts.out [2024-07-19 16:47:14,171] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: G227_M12_featureCounts.out [2024-07-19 16:47:14,171] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: G227_M12_featureCounts.out [2024-07-19 16:47:14,172] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: G227_M12_featureCounts.out [2024-07-19 16:47:14,195] multiqc [DEBUG ] File ignored by stacks/sumstats because it exceeded search pattern filesize limit: G227_M12_featureCounts.out [2024-07-19 16:47:15,028] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G227_M12_metrics [2024-07-19 16:47:15,030] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G227_M12_metrics [2024-07-19 16:47:15,033] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G227_M12_metrics [2024-07-19 16:47:15,072] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G227_M29_CKDL240023967-1A_22NF25LT3_L5_1.fq.gz [2024-07-19 16:47:15,075] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G227_M29_CKDL240023967-1A_22NF25LT3_L5_2.fq.gz [2024-07-19 16:47:15,115] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G227_M29_primary_unique.bam.bai [2024-07-19 16:47:15,141] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G227_M29_primary_unique.bam [2024-07-19 16:47:15,162] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G227_M29_metrics [2024-07-19 16:47:15,164] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G227_M29_metrics [2024-07-19 16:47:15,165] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G227_M29_metrics [2024-07-19 16:47:15,165] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G227_M29_metrics [2024-07-19 16:47:15,170] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G227_M29_metrics [2024-07-19 16:47:15,189] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G227_M29_hist.pdf [2024-07-19 16:47:15,220] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G227_M29_featureCounts.out [2024-07-19 16:47:15,221] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G227_M29_featureCounts.out [2024-07-19 16:47:15,222] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G227_M29_featureCounts.out [2024-07-19 16:47:15,222] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G227_M29_featureCounts.out [2024-07-19 16:47:15,225] multiqc [DEBUG ] File ignored by vep/vep_html because it exceeded search pattern filesize limit: G227_M29_featureCounts.out [2024-07-19 16:47:15,225] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G227_M29_featureCounts.out [2024-07-19 16:47:15,225] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G227_M29_featureCounts.out [2024-07-19 16:47:15,225] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: G227_M29_featureCounts.out [2024-07-19 16:47:15,225] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: G227_M29_featureCounts.out [2024-07-19 16:47:15,225] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: G227_M29_featureCounts.out [2024-07-19 16:47:15,225] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: G227_M29_featureCounts.out [2024-07-19 16:47:15,225] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: G227_M29_featureCounts.out [2024-07-19 16:47:15,245] multiqc [DEBUG ] File ignored by stacks/sumstats because it exceeded search pattern filesize limit: G227_M29_featureCounts.out [2024-07-19 16:47:16,149] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G227_M29_featureCounts.out [2024-07-19 16:47:16,151] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G227_M29_featureCounts.out [2024-07-19 16:47:16,152] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G227_M29_featureCounts.out [2024-07-19 16:47:16,152] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G227_M29_featureCounts.out [2024-07-19 16:47:16,156] multiqc [DEBUG ] File ignored by vep/vep_html because it exceeded search pattern filesize limit: G227_M29_featureCounts.out [2024-07-19 16:47:16,156] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G227_M29_featureCounts.out [2024-07-19 16:47:16,156] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G227_M29_featureCounts.out [2024-07-19 16:47:16,157] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: G227_M29_featureCounts.out [2024-07-19 16:47:16,157] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: G227_M29_featureCounts.out [2024-07-19 16:47:16,157] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: G227_M29_featureCounts.out [2024-07-19 16:47:16,157] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: G227_M29_featureCounts.out [2024-07-19 16:47:16,157] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: G227_M29_featureCounts.out [2024-07-19 16:47:16,177] multiqc [DEBUG ] File ignored by stacks/sumstats because it exceeded search pattern filesize limit: G227_M29_featureCounts.out [2024-07-19 16:47:17,047] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G227_M29_metrics [2024-07-19 16:47:17,049] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G227_M29_metrics [2024-07-19 16:47:17,054] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G227_M29_metrics [2024-07-19 16:47:17,097] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G227_M13_CKDL240023967-1A_22NF25LT3_L5_1.fq.gz [2024-07-19 16:47:17,100] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G227_M13_CKDL240023967-1A_22NF25LT3_L5_2.fq.gz [2024-07-19 16:47:17,113] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G227_M13_primary_unique.bam.bai [2024-07-19 16:47:17,168] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G227_M13_primary_unique.bam [2024-07-19 16:47:17,182] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G227_M13_hist.pdf [2024-07-19 16:47:17,199] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G227_M13_metrics [2024-07-19 16:47:17,201] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G227_M13_metrics [2024-07-19 16:47:17,201] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G227_M13_metrics [2024-07-19 16:47:17,201] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G227_M13_metrics [2024-07-19 16:47:17,204] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G227_M13_metrics [2024-07-19 16:47:17,247] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G227_M13_featureCounts.out [2024-07-19 16:47:17,249] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G227_M13_featureCounts.out [2024-07-19 16:47:17,249] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G227_M13_featureCounts.out [2024-07-19 16:47:17,249] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G227_M13_featureCounts.out [2024-07-19 16:47:17,253] multiqc [DEBUG ] File ignored by vep/vep_html because it exceeded search pattern filesize limit: G227_M13_featureCounts.out [2024-07-19 16:47:17,253] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G227_M13_featureCounts.out [2024-07-19 16:47:17,253] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G227_M13_featureCounts.out [2024-07-19 16:47:17,253] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: G227_M13_featureCounts.out [2024-07-19 16:47:17,253] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: G227_M13_featureCounts.out [2024-07-19 16:47:17,253] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: G227_M13_featureCounts.out [2024-07-19 16:47:17,253] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: G227_M13_featureCounts.out [2024-07-19 16:47:17,253] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: G227_M13_featureCounts.out [2024-07-19 16:47:17,272] multiqc [DEBUG ] File ignored by stacks/sumstats because it exceeded search pattern filesize limit: G227_M13_featureCounts.out [2024-07-19 16:47:18,163] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G227_M13_featureCounts.out [2024-07-19 16:47:18,165] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G227_M13_featureCounts.out [2024-07-19 16:47:18,166] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G227_M13_featureCounts.out [2024-07-19 16:47:18,166] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G227_M13_featureCounts.out [2024-07-19 16:47:18,170] multiqc [DEBUG ] File ignored by vep/vep_html because it exceeded search pattern filesize limit: G227_M13_featureCounts.out [2024-07-19 16:47:18,170] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G227_M13_featureCounts.out [2024-07-19 16:47:18,170] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G227_M13_featureCounts.out [2024-07-19 16:47:18,170] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: G227_M13_featureCounts.out [2024-07-19 16:47:18,170] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: G227_M13_featureCounts.out [2024-07-19 16:47:18,171] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: G227_M13_featureCounts.out [2024-07-19 16:47:18,171] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: G227_M13_featureCounts.out [2024-07-19 16:47:18,171] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: G227_M13_featureCounts.out [2024-07-19 16:47:18,191] multiqc [DEBUG ] File ignored by stacks/sumstats because it exceeded search pattern filesize limit: G227_M13_featureCounts.out [2024-07-19 16:47:19,070] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G227_M13_metrics [2024-07-19 16:47:19,072] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G227_M13_metrics [2024-07-19 16:47:19,075] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G227_M13_metrics [2024-07-19 16:47:19,101] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G227_M14_CKDL240023967-1A_22NF25LT3_L5_2.fq.gz [2024-07-19 16:47:19,104] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G227_M14_CKDL240023967-1A_22NF25LT3_L5_1.fq.gz [2024-07-19 16:47:19,115] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G227_M14_primary_unique.bam.bai [2024-07-19 16:47:19,140] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G227_M14_primary_unique.bam [2024-07-19 16:47:19,163] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G227_M14_hist.pdf [2024-07-19 16:47:19,186] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G227_M14_metrics [2024-07-19 16:47:19,189] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G227_M14_metrics [2024-07-19 16:47:19,189] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G227_M14_metrics [2024-07-19 16:47:19,189] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G227_M14_metrics [2024-07-19 16:47:19,194] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G227_M14_metrics [2024-07-19 16:47:19,249] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G227_M14_featureCounts.out [2024-07-19 16:47:19,252] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G227_M14_featureCounts.out [2024-07-19 16:47:19,252] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G227_M14_featureCounts.out [2024-07-19 16:47:19,252] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G227_M14_featureCounts.out [2024-07-19 16:47:19,257] multiqc [DEBUG ] File ignored by vep/vep_html because it exceeded search pattern filesize limit: G227_M14_featureCounts.out [2024-07-19 16:47:19,257] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G227_M14_featureCounts.out [2024-07-19 16:47:19,257] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G227_M14_featureCounts.out [2024-07-19 16:47:19,257] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: G227_M14_featureCounts.out [2024-07-19 16:47:19,258] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: G227_M14_featureCounts.out [2024-07-19 16:47:19,258] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: G227_M14_featureCounts.out [2024-07-19 16:47:19,258] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: G227_M14_featureCounts.out [2024-07-19 16:47:19,258] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: G227_M14_featureCounts.out [2024-07-19 16:47:19,278] multiqc [DEBUG ] File ignored by stacks/sumstats because it exceeded search pattern filesize limit: G227_M14_featureCounts.out [2024-07-19 16:47:20,166] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G227_M14_featureCounts.out [2024-07-19 16:47:20,169] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G227_M14_featureCounts.out [2024-07-19 16:47:20,169] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G227_M14_featureCounts.out [2024-07-19 16:47:20,169] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G227_M14_featureCounts.out [2024-07-19 16:47:20,174] multiqc [DEBUG ] File ignored by vep/vep_html because it exceeded search pattern filesize limit: G227_M14_featureCounts.out [2024-07-19 16:47:20,174] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G227_M14_featureCounts.out [2024-07-19 16:47:20,174] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G227_M14_featureCounts.out [2024-07-19 16:47:20,174] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: G227_M14_featureCounts.out [2024-07-19 16:47:20,175] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: G227_M14_featureCounts.out [2024-07-19 16:47:20,175] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: G227_M14_featureCounts.out [2024-07-19 16:47:20,175] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: G227_M14_featureCounts.out [2024-07-19 16:47:20,175] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: G227_M14_featureCounts.out [2024-07-19 16:47:20,196] multiqc [DEBUG ] File ignored by stacks/sumstats because it exceeded search pattern filesize limit: G227_M14_featureCounts.out [2024-07-19 16:47:21,052] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G227_M14_metrics [2024-07-19 16:47:21,054] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G227_M14_metrics [2024-07-19 16:47:21,057] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G227_M14_metrics [2024-07-19 16:47:21,094] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G227_M15_CKDL240023967-1A_22NF25LT3_L5_2.fq.gz [2024-07-19 16:47:21,097] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G227_M15_CKDL240023967-1A_22NF25LT3_L5_1.fq.gz [2024-07-19 16:47:21,147] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G227_M15_primary_unique.bam [2024-07-19 16:47:21,147] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G227_M15_primary_unique.bam.bai [2024-07-19 16:47:21,172] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G227_M15_hist.pdf [2024-07-19 16:47:21,195] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G227_M15_metrics [2024-07-19 16:47:21,197] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G227_M15_metrics [2024-07-19 16:47:21,197] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G227_M15_metrics [2024-07-19 16:47:21,197] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G227_M15_metrics [2024-07-19 16:47:21,201] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G227_M15_metrics [2024-07-19 16:47:21,238] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G227_M15_featureCounts.out [2024-07-19 16:47:21,239] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G227_M15_featureCounts.out [2024-07-19 16:47:21,240] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G227_M15_featureCounts.out [2024-07-19 16:47:21,240] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G227_M15_featureCounts.out [2024-07-19 16:47:21,244] multiqc [DEBUG ] File ignored by vep/vep_html because it exceeded search pattern filesize limit: G227_M15_featureCounts.out [2024-07-19 16:47:21,244] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G227_M15_featureCounts.out [2024-07-19 16:47:21,244] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G227_M15_featureCounts.out [2024-07-19 16:47:21,244] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: G227_M15_featureCounts.out [2024-07-19 16:47:21,245] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: G227_M15_featureCounts.out [2024-07-19 16:47:21,245] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: G227_M15_featureCounts.out [2024-07-19 16:47:21,245] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: G227_M15_featureCounts.out [2024-07-19 16:47:21,245] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: G227_M15_featureCounts.out [2024-07-19 16:47:21,269] multiqc [DEBUG ] File ignored by stacks/sumstats because it exceeded search pattern filesize limit: G227_M15_featureCounts.out [2024-07-19 16:47:22,175] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G227_M15_featureCounts.out [2024-07-19 16:47:22,177] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G227_M15_featureCounts.out [2024-07-19 16:47:22,177] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G227_M15_featureCounts.out [2024-07-19 16:47:22,177] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G227_M15_featureCounts.out [2024-07-19 16:47:22,181] multiqc [DEBUG ] File ignored by vep/vep_html because it exceeded search pattern filesize limit: G227_M15_featureCounts.out [2024-07-19 16:47:22,181] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G227_M15_featureCounts.out [2024-07-19 16:47:22,181] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G227_M15_featureCounts.out [2024-07-19 16:47:22,181] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: G227_M15_featureCounts.out [2024-07-19 16:47:22,181] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: G227_M15_featureCounts.out [2024-07-19 16:47:22,181] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: G227_M15_featureCounts.out [2024-07-19 16:47:22,181] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: G227_M15_featureCounts.out [2024-07-19 16:47:22,181] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: G227_M15_featureCounts.out [2024-07-19 16:47:22,202] multiqc [DEBUG ] File ignored by stacks/sumstats because it exceeded search pattern filesize limit: G227_M15_featureCounts.out [2024-07-19 16:47:23,095] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G227_M15_metrics [2024-07-19 16:47:23,098] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G227_M15_metrics [2024-07-19 16:47:23,103] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G227_M15_metrics [2024-07-19 16:47:23,139] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G227_M20_CKDL240023967-1A_22NF25LT3_L5_1.fq.gz [2024-07-19 16:47:23,142] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G227_M20_CKDL240023967-1A_22NF25LT3_L5_2.fq.gz [2024-07-19 16:47:23,179] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G227_M20_primary_unique.bam.bai [2024-07-19 16:47:23,197] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G227_M20_primary_unique.bam [2024-07-19 16:47:23,226] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G227_M20_metrics [2024-07-19 16:47:23,227] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G227_M20_metrics [2024-07-19 16:47:23,228] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G227_M20_metrics [2024-07-19 16:47:23,228] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G227_M20_metrics [2024-07-19 16:47:23,231] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G227_M20_metrics [2024-07-19 16:47:23,246] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G227_M20_hist.pdf [2024-07-19 16:47:23,276] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G227_M20_featureCounts.out [2024-07-19 16:47:23,279] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G227_M20_featureCounts.out [2024-07-19 16:47:23,279] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G227_M20_featureCounts.out [2024-07-19 16:47:23,279] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G227_M20_featureCounts.out [2024-07-19 16:47:23,285] multiqc [DEBUG ] File ignored by vep/vep_html because it exceeded search pattern filesize limit: G227_M20_featureCounts.out [2024-07-19 16:47:23,285] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G227_M20_featureCounts.out [2024-07-19 16:47:23,285] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G227_M20_featureCounts.out [2024-07-19 16:47:23,285] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: G227_M20_featureCounts.out [2024-07-19 16:47:23,285] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: G227_M20_featureCounts.out [2024-07-19 16:47:23,285] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: G227_M20_featureCounts.out [2024-07-19 16:47:23,285] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: G227_M20_featureCounts.out [2024-07-19 16:47:23,285] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: G227_M20_featureCounts.out [2024-07-19 16:47:23,308] multiqc [DEBUG ] File ignored by stacks/sumstats because it exceeded search pattern filesize limit: G227_M20_featureCounts.out [2024-07-19 16:47:24,212] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G227_M20_featureCounts.out [2024-07-19 16:47:24,214] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G227_M20_featureCounts.out [2024-07-19 16:47:24,230] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G227_M20_featureCounts.out [2024-07-19 16:47:24,230] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G227_M20_featureCounts.out [2024-07-19 16:47:24,235] multiqc [DEBUG ] File ignored by vep/vep_html because it exceeded search pattern filesize limit: G227_M20_featureCounts.out [2024-07-19 16:47:24,236] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G227_M20_featureCounts.out [2024-07-19 16:47:24,236] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G227_M20_featureCounts.out [2024-07-19 16:47:24,236] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: G227_M20_featureCounts.out [2024-07-19 16:47:24,236] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: G227_M20_featureCounts.out [2024-07-19 16:47:24,236] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: G227_M20_featureCounts.out [2024-07-19 16:47:24,236] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: G227_M20_featureCounts.out [2024-07-19 16:47:24,236] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: G227_M20_featureCounts.out [2024-07-19 16:47:24,259] multiqc [DEBUG ] File ignored by stacks/sumstats because it exceeded search pattern filesize limit: G227_M20_featureCounts.out [2024-07-19 16:47:25,127] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G227_M20_metrics [2024-07-19 16:47:25,129] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G227_M20_metrics [2024-07-19 16:47:25,132] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G227_M20_metrics [2024-07-19 16:47:25,162] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G227_M21_CKDL240023967-1A_22NF25LT3_L5_1.fq.gz [2024-07-19 16:47:25,165] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G227_M21_CKDL240023967-1A_22NF25LT3_L5_2.fq.gz [2024-07-19 16:47:25,212] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G227_M21_primary_unique.bam.bai [2024-07-19 16:47:25,212] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G227_M21_primary_unique.bam [2024-07-19 16:47:25,236] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G227_M21_hist.pdf [2024-07-19 16:47:25,252] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G227_M21_metrics [2024-07-19 16:47:25,254] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G227_M21_metrics [2024-07-19 16:47:25,254] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G227_M21_metrics [2024-07-19 16:47:25,254] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G227_M21_metrics [2024-07-19 16:47:25,258] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G227_M21_metrics [2024-07-19 16:47:25,310] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G227_M21_featureCounts.out [2024-07-19 16:47:25,312] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G227_M21_featureCounts.out [2024-07-19 16:47:25,312] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G227_M21_featureCounts.out [2024-07-19 16:47:25,313] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G227_M21_featureCounts.out [2024-07-19 16:47:25,317] multiqc [DEBUG ] File ignored by vep/vep_html because it exceeded search pattern filesize limit: G227_M21_featureCounts.out [2024-07-19 16:47:25,317] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G227_M21_featureCounts.out [2024-07-19 16:47:25,317] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G227_M21_featureCounts.out [2024-07-19 16:47:25,317] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: G227_M21_featureCounts.out [2024-07-19 16:47:25,317] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: G227_M21_featureCounts.out [2024-07-19 16:47:25,317] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: G227_M21_featureCounts.out [2024-07-19 16:47:25,317] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: G227_M21_featureCounts.out [2024-07-19 16:47:25,317] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: G227_M21_featureCounts.out [2024-07-19 16:47:25,338] multiqc [DEBUG ] File ignored by stacks/sumstats because it exceeded search pattern filesize limit: G227_M21_featureCounts.out [2024-07-19 16:47:26,237] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G227_M21_featureCounts.out [2024-07-19 16:47:26,239] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G227_M21_featureCounts.out [2024-07-19 16:47:26,239] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G227_M21_featureCounts.out [2024-07-19 16:47:26,239] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G227_M21_featureCounts.out [2024-07-19 16:47:26,243] multiqc [DEBUG ] File ignored by vep/vep_html because it exceeded search pattern filesize limit: G227_M21_featureCounts.out [2024-07-19 16:47:26,243] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G227_M21_featureCounts.out [2024-07-19 16:47:26,243] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G227_M21_featureCounts.out [2024-07-19 16:47:26,243] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: G227_M21_featureCounts.out [2024-07-19 16:47:26,243] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: G227_M21_featureCounts.out [2024-07-19 16:47:26,243] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: G227_M21_featureCounts.out [2024-07-19 16:47:26,243] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: G227_M21_featureCounts.out [2024-07-19 16:47:26,243] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: G227_M21_featureCounts.out [2024-07-19 16:47:26,263] multiqc [DEBUG ] File ignored by stacks/sumstats because it exceeded search pattern filesize limit: G227_M21_featureCounts.out [2024-07-19 16:47:27,135] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G227_M21_metrics [2024-07-19 16:47:27,137] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G227_M21_metrics [2024-07-19 16:47:27,140] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G227_M21_metrics [2024-07-19 16:47:27,169] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G227_M16_CKDL240023967-1A_22NF25LT3_L5_1.fq.gz [2024-07-19 16:47:27,172] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G227_M16_CKDL240023967-1A_22NF25LT3_L5_2.fq.gz [2024-07-19 16:47:27,233] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G227_M16_primary_unique.bam.bai [2024-07-19 16:47:27,233] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G227_M16_primary_unique.bam [2024-07-19 16:47:27,250] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G227_M16_metrics [2024-07-19 16:47:27,252] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G227_M16_metrics [2024-07-19 16:47:27,252] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G227_M16_metrics [2024-07-19 16:47:27,252] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G227_M16_metrics [2024-07-19 16:47:27,257] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G227_M16_metrics [2024-07-19 16:47:27,275] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G227_M16_hist.pdf [2024-07-19 16:47:27,303] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G227_M16_featureCounts.out [2024-07-19 16:47:27,305] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G227_M16_featureCounts.out [2024-07-19 16:47:27,306] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G227_M16_featureCounts.out [2024-07-19 16:47:27,306] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G227_M16_featureCounts.out [2024-07-19 16:47:27,309] multiqc [DEBUG ] File ignored by vep/vep_html because it exceeded search pattern filesize limit: G227_M16_featureCounts.out [2024-07-19 16:47:27,309] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G227_M16_featureCounts.out [2024-07-19 16:47:27,309] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G227_M16_featureCounts.out [2024-07-19 16:47:27,309] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: G227_M16_featureCounts.out [2024-07-19 16:47:27,309] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: G227_M16_featureCounts.out [2024-07-19 16:47:27,309] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: G227_M16_featureCounts.out [2024-07-19 16:47:27,309] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: G227_M16_featureCounts.out [2024-07-19 16:47:27,310] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: G227_M16_featureCounts.out [2024-07-19 16:47:27,328] multiqc [DEBUG ] File ignored by stacks/sumstats because it exceeded search pattern filesize limit: G227_M16_featureCounts.out [2024-07-19 16:47:28,231] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G227_M16_featureCounts.out [2024-07-19 16:47:28,233] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G227_M16_featureCounts.out [2024-07-19 16:47:28,234] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G227_M16_featureCounts.out [2024-07-19 16:47:28,234] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G227_M16_featureCounts.out [2024-07-19 16:47:28,237] multiqc [DEBUG ] File ignored by vep/vep_html because it exceeded search pattern filesize limit: G227_M16_featureCounts.out [2024-07-19 16:47:28,237] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G227_M16_featureCounts.out [2024-07-19 16:47:28,237] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G227_M16_featureCounts.out [2024-07-19 16:47:28,237] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: G227_M16_featureCounts.out [2024-07-19 16:47:28,237] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: G227_M16_featureCounts.out [2024-07-19 16:47:28,238] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: G227_M16_featureCounts.out [2024-07-19 16:47:28,238] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: G227_M16_featureCounts.out [2024-07-19 16:47:28,238] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: G227_M16_featureCounts.out [2024-07-19 16:47:28,256] multiqc [DEBUG ] File ignored by stacks/sumstats because it exceeded search pattern filesize limit: G227_M16_featureCounts.out [2024-07-19 16:47:29,121] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G227_M16_metrics [2024-07-19 16:47:29,122] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G227_M16_metrics [2024-07-19 16:47:29,125] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G227_M16_metrics [2024-07-19 16:47:29,164] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G227_M17_CKDL240023967-1A_22NF25LT3_L5_2.fq.gz [2024-07-19 16:47:29,166] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G227_M17_CKDL240023967-1A_22NF25LT3_L5_1.fq.gz [2024-07-19 16:47:29,203] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G227_M17_primary_unique.bam.bai [2024-07-19 16:47:29,215] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G227_M17_primary_unique.bam [2024-07-19 16:47:29,243] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G227_M17_hist.pdf [2024-07-19 16:47:29,263] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G227_M17_metrics [2024-07-19 16:47:29,266] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G227_M17_metrics [2024-07-19 16:47:29,266] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G227_M17_metrics [2024-07-19 16:47:29,267] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G227_M17_metrics [2024-07-19 16:47:29,271] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G227_M17_metrics [2024-07-19 16:47:29,320] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G227_M17_featureCounts.out [2024-07-19 16:47:29,323] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G227_M17_featureCounts.out [2024-07-19 16:47:29,323] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G227_M17_featureCounts.out [2024-07-19 16:47:29,323] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G227_M17_featureCounts.out [2024-07-19 16:47:29,328] multiqc [DEBUG ] File ignored by vep/vep_html because it exceeded search pattern filesize limit: G227_M17_featureCounts.out [2024-07-19 16:47:29,328] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G227_M17_featureCounts.out [2024-07-19 16:47:29,329] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G227_M17_featureCounts.out [2024-07-19 16:47:29,329] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: G227_M17_featureCounts.out [2024-07-19 16:47:29,329] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: G227_M17_featureCounts.out [2024-07-19 16:47:29,329] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: G227_M17_featureCounts.out [2024-07-19 16:47:29,329] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: G227_M17_featureCounts.out [2024-07-19 16:47:29,329] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: G227_M17_featureCounts.out [2024-07-19 16:47:29,351] multiqc [DEBUG ] File ignored by stacks/sumstats because it exceeded search pattern filesize limit: G227_M17_featureCounts.out [2024-07-19 16:47:30,223] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G227_M17_featureCounts.out [2024-07-19 16:47:30,226] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G227_M17_featureCounts.out [2024-07-19 16:47:30,227] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G227_M17_featureCounts.out [2024-07-19 16:47:30,227] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G227_M17_featureCounts.out [2024-07-19 16:47:30,231] multiqc [DEBUG ] File ignored by vep/vep_html because it exceeded search pattern filesize limit: G227_M17_featureCounts.out [2024-07-19 16:47:30,231] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G227_M17_featureCounts.out [2024-07-19 16:47:30,231] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G227_M17_featureCounts.out [2024-07-19 16:47:30,231] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: G227_M17_featureCounts.out [2024-07-19 16:47:30,231] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: G227_M17_featureCounts.out [2024-07-19 16:47:30,231] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: G227_M17_featureCounts.out [2024-07-19 16:47:30,231] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: G227_M17_featureCounts.out [2024-07-19 16:47:30,231] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: G227_M17_featureCounts.out [2024-07-19 16:47:30,251] multiqc [DEBUG ] File ignored by stacks/sumstats because it exceeded search pattern filesize limit: G227_M17_featureCounts.out [2024-07-19 16:47:31,103] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G227_M17_metrics [2024-07-19 16:47:31,105] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G227_M17_metrics [2024-07-19 16:47:31,108] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G227_M17_metrics [2024-07-19 16:47:31,147] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G227_M01_CKDL240023967-1A_22NF25LT3_L5_1.fq.gz [2024-07-19 16:47:31,150] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G227_M01_CKDL240023967-1A_22NF25LT3_L5_2.fq.gz [2024-07-19 16:47:31,181] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G227_M01_primary_unique.bam.bai [2024-07-19 16:47:31,220] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G227_M01_primary_unique.bam [2024-07-19 16:47:31,223] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G227_M01_metrics [2024-07-19 16:47:31,225] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G227_M01_metrics [2024-07-19 16:47:31,225] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G227_M01_metrics [2024-07-19 16:47:31,225] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G227_M01_metrics [2024-07-19 16:47:31,228] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G227_M01_metrics [2024-07-19 16:47:31,238] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G227_M01_hist.pdf [2024-07-19 16:47:31,252] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G227_M01_featureCounts.out [2024-07-19 16:47:31,254] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G227_M01_featureCounts.out [2024-07-19 16:47:31,254] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G227_M01_featureCounts.out [2024-07-19 16:47:31,254] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G227_M01_featureCounts.out [2024-07-19 16:47:31,257] multiqc [DEBUG ] File ignored by vep/vep_html because it exceeded search pattern filesize limit: G227_M01_featureCounts.out [2024-07-19 16:47:31,257] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G227_M01_featureCounts.out [2024-07-19 16:47:31,257] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G227_M01_featureCounts.out [2024-07-19 16:47:31,257] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: G227_M01_featureCounts.out [2024-07-19 16:47:31,257] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: G227_M01_featureCounts.out [2024-07-19 16:47:31,257] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: G227_M01_featureCounts.out [2024-07-19 16:47:31,257] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: G227_M01_featureCounts.out [2024-07-19 16:47:31,257] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: G227_M01_featureCounts.out [2024-07-19 16:47:31,273] multiqc [DEBUG ] File ignored by stacks/sumstats because it exceeded search pattern filesize limit: G227_M01_featureCounts.out [2024-07-19 16:47:32,143] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G227_M01_featureCounts.out [2024-07-19 16:47:32,146] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G227_M01_featureCounts.out [2024-07-19 16:47:32,147] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G227_M01_featureCounts.out [2024-07-19 16:47:32,147] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G227_M01_featureCounts.out [2024-07-19 16:47:32,151] multiqc [DEBUG ] File ignored by vep/vep_html because it exceeded search pattern filesize limit: G227_M01_featureCounts.out [2024-07-19 16:47:32,151] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G227_M01_featureCounts.out [2024-07-19 16:47:32,152] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G227_M01_featureCounts.out [2024-07-19 16:47:32,152] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: G227_M01_featureCounts.out [2024-07-19 16:47:32,152] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: G227_M01_featureCounts.out [2024-07-19 16:47:32,152] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: G227_M01_featureCounts.out [2024-07-19 16:47:32,152] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: G227_M01_featureCounts.out [2024-07-19 16:47:32,152] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: G227_M01_featureCounts.out [2024-07-19 16:47:32,174] multiqc [DEBUG ] File ignored by stacks/sumstats because it exceeded search pattern filesize limit: G227_M01_featureCounts.out [2024-07-19 16:47:33,036] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G227_M01_metrics [2024-07-19 16:47:33,038] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G227_M01_metrics [2024-07-19 16:47:33,041] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G227_M01_metrics [2024-07-19 16:47:33,075] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G227_M18_CKDL240023967-1A_22NF25LT3_L5_2.fq.gz [2024-07-19 16:47:33,078] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G227_M18_CKDL240023967-1A_22NF25LT3_L5_1.fq.gz [2024-07-19 16:47:33,092] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G227_M18_primary_unique.bam [2024-07-19 16:47:33,109] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G227_M18_primary_unique.bam.bai [2024-07-19 16:47:33,156] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G227_M18_hist.pdf [2024-07-19 16:47:33,159] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G227_M18_metrics [2024-07-19 16:47:33,160] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G227_M18_metrics [2024-07-19 16:47:33,160] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G227_M18_metrics [2024-07-19 16:47:33,160] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G227_M18_metrics [2024-07-19 16:47:33,163] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G227_M18_metrics [2024-07-19 16:47:33,183] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G227_M18_featureCounts.out [2024-07-19 16:47:33,185] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G227_M18_featureCounts.out [2024-07-19 16:47:33,185] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G227_M18_featureCounts.out [2024-07-19 16:47:33,186] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G227_M18_featureCounts.out [2024-07-19 16:47:33,188] multiqc [DEBUG ] File ignored by vep/vep_html because it exceeded search pattern filesize limit: G227_M18_featureCounts.out [2024-07-19 16:47:33,188] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G227_M18_featureCounts.out [2024-07-19 16:47:33,188] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G227_M18_featureCounts.out [2024-07-19 16:47:33,188] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: G227_M18_featureCounts.out [2024-07-19 16:47:33,188] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: G227_M18_featureCounts.out [2024-07-19 16:47:33,188] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: G227_M18_featureCounts.out [2024-07-19 16:47:33,188] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: G227_M18_featureCounts.out [2024-07-19 16:47:33,188] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: G227_M18_featureCounts.out [2024-07-19 16:47:33,205] multiqc [DEBUG ] File ignored by stacks/sumstats because it exceeded search pattern filesize limit: G227_M18_featureCounts.out [2024-07-19 16:47:34,079] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G227_M18_featureCounts.out [2024-07-19 16:47:34,081] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G227_M18_featureCounts.out [2024-07-19 16:47:34,081] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G227_M18_featureCounts.out [2024-07-19 16:47:34,081] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G227_M18_featureCounts.out [2024-07-19 16:47:34,083] multiqc [DEBUG ] File ignored by vep/vep_html because it exceeded search pattern filesize limit: G227_M18_featureCounts.out [2024-07-19 16:47:34,083] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G227_M18_featureCounts.out [2024-07-19 16:47:34,083] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G227_M18_featureCounts.out [2024-07-19 16:47:34,083] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: G227_M18_featureCounts.out [2024-07-19 16:47:34,083] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: G227_M18_featureCounts.out [2024-07-19 16:47:34,083] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: G227_M18_featureCounts.out [2024-07-19 16:47:34,084] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: G227_M18_featureCounts.out [2024-07-19 16:47:34,084] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: G227_M18_featureCounts.out [2024-07-19 16:47:34,105] multiqc [DEBUG ] File ignored by stacks/sumstats because it exceeded search pattern filesize limit: G227_M18_featureCounts.out [2024-07-19 16:47:34,974] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G227_M18_metrics [2024-07-19 16:47:34,976] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G227_M18_metrics [2024-07-19 16:47:34,980] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G227_M18_metrics [2024-07-19 16:47:35,014] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G227_M02_CKDL240023967-1A_22NF25LT3_L5_1.fq.gz [2024-07-19 16:47:35,016] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G227_M02_CKDL240023967-1A_22NF25LT3_L5_2.fq.gz [2024-07-19 16:47:35,042] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G227_M02_primary_unique.bam [2024-07-19 16:47:35,042] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G227_M02_primary_unique.bam.bai [2024-07-19 16:47:35,078] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G227_M02_hist.pdf [2024-07-19 16:47:35,081] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G227_M02_metrics [2024-07-19 16:47:35,083] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G227_M02_metrics [2024-07-19 16:47:35,083] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G227_M02_metrics [2024-07-19 16:47:35,083] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G227_M02_metrics [2024-07-19 16:47:35,086] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G227_M02_metrics [2024-07-19 16:47:35,114] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G227_M02_featureCounts.out [2024-07-19 16:47:35,116] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G227_M02_featureCounts.out [2024-07-19 16:47:35,116] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G227_M02_featureCounts.out [2024-07-19 16:47:35,116] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G227_M02_featureCounts.out [2024-07-19 16:47:35,119] multiqc [DEBUG ] File ignored by vep/vep_html because it exceeded search pattern filesize limit: G227_M02_featureCounts.out [2024-07-19 16:47:35,119] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G227_M02_featureCounts.out [2024-07-19 16:47:35,119] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G227_M02_featureCounts.out [2024-07-19 16:47:35,119] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: G227_M02_featureCounts.out [2024-07-19 16:47:35,119] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: G227_M02_featureCounts.out [2024-07-19 16:47:35,119] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: G227_M02_featureCounts.out [2024-07-19 16:47:35,119] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: G227_M02_featureCounts.out [2024-07-19 16:47:35,119] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: G227_M02_featureCounts.out [2024-07-19 16:47:35,135] multiqc [DEBUG ] File ignored by stacks/sumstats because it exceeded search pattern filesize limit: G227_M02_featureCounts.out [2024-07-19 16:47:36,022] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G227_M02_featureCounts.out [2024-07-19 16:47:36,023] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G227_M02_featureCounts.out [2024-07-19 16:47:36,024] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G227_M02_featureCounts.out [2024-07-19 16:47:36,024] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G227_M02_featureCounts.out [2024-07-19 16:47:36,028] multiqc [DEBUG ] File ignored by vep/vep_html because it exceeded search pattern filesize limit: G227_M02_featureCounts.out [2024-07-19 16:47:36,028] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G227_M02_featureCounts.out [2024-07-19 16:47:36,029] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G227_M02_featureCounts.out [2024-07-19 16:47:36,029] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: G227_M02_featureCounts.out [2024-07-19 16:47:36,029] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: G227_M02_featureCounts.out [2024-07-19 16:47:36,029] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: G227_M02_featureCounts.out [2024-07-19 16:47:36,029] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: G227_M02_featureCounts.out [2024-07-19 16:47:36,029] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: G227_M02_featureCounts.out [2024-07-19 16:47:36,055] multiqc [DEBUG ] File ignored by stacks/sumstats because it exceeded search pattern filesize limit: G227_M02_featureCounts.out [2024-07-19 16:47:36,883] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G227_M02_metrics [2024-07-19 16:47:36,885] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G227_M02_metrics [2024-07-19 16:47:36,889] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G227_M02_metrics [2024-07-19 16:47:36,932] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G227_M19_CKDL240023967-1A_22NF25LT3_L5_1.fq.gz [2024-07-19 16:47:36,935] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G227_M19_CKDL240023967-1A_22NF25LT3_L5_2.fq.gz [2024-07-19 16:47:36,957] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G227_M19_primary_unique.bam [2024-07-19 16:47:36,971] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G227_M19_primary_unique.bam.bai [2024-07-19 16:47:37,021] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G227_M19_metrics [2024-07-19 16:47:37,023] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G227_M19_metrics [2024-07-19 16:47:37,023] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G227_M19_metrics [2024-07-19 16:47:37,023] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G227_M19_metrics [2024-07-19 16:47:37,028] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G227_M19_metrics [2024-07-19 16:47:37,043] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G227_M19_hist.pdf [2024-07-19 16:47:37,046] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G227_M19_featureCounts.out [2024-07-19 16:47:37,048] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G227_M19_featureCounts.out [2024-07-19 16:47:37,048] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G227_M19_featureCounts.out [2024-07-19 16:47:37,048] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G227_M19_featureCounts.out [2024-07-19 16:47:37,051] multiqc [DEBUG ] File ignored by vep/vep_html because it exceeded search pattern filesize limit: G227_M19_featureCounts.out [2024-07-19 16:47:37,051] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G227_M19_featureCounts.out [2024-07-19 16:47:37,051] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G227_M19_featureCounts.out [2024-07-19 16:47:37,052] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: G227_M19_featureCounts.out [2024-07-19 16:47:37,052] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: G227_M19_featureCounts.out [2024-07-19 16:47:37,052] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: G227_M19_featureCounts.out [2024-07-19 16:47:37,052] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: G227_M19_featureCounts.out [2024-07-19 16:47:37,052] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: G227_M19_featureCounts.out [2024-07-19 16:47:37,068] multiqc [DEBUG ] File ignored by stacks/sumstats because it exceeded search pattern filesize limit: G227_M19_featureCounts.out [2024-07-19 16:47:37,906] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G227_M19_featureCounts.out [2024-07-19 16:47:37,908] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G227_M19_featureCounts.out [2024-07-19 16:47:37,908] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G227_M19_featureCounts.out [2024-07-19 16:47:37,908] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G227_M19_featureCounts.out [2024-07-19 16:47:37,911] multiqc [DEBUG ] File ignored by vep/vep_html because it exceeded search pattern filesize limit: G227_M19_featureCounts.out [2024-07-19 16:47:37,911] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G227_M19_featureCounts.out [2024-07-19 16:47:37,911] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G227_M19_featureCounts.out [2024-07-19 16:47:37,911] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: G227_M19_featureCounts.out [2024-07-19 16:47:37,911] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: G227_M19_featureCounts.out [2024-07-19 16:47:37,911] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: G227_M19_featureCounts.out [2024-07-19 16:47:37,911] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: G227_M19_featureCounts.out [2024-07-19 16:47:37,911] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: G227_M19_featureCounts.out [2024-07-19 16:47:37,927] multiqc [DEBUG ] File ignored by stacks/sumstats because it exceeded search pattern filesize limit: G227_M19_featureCounts.out [2024-07-19 16:47:38,773] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G227_M19_metrics [2024-07-19 16:47:38,776] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G227_M19_metrics [2024-07-19 16:47:38,780] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G227_M19_metrics [2024-07-19 16:47:38,822] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G227_M03_CKDL240023967-1A_22NF25LT3_L5_1.fq.gz [2024-07-19 16:47:38,824] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G227_M03_CKDL240023967-1A_22NF25LT3_L5_2.fq.gz [2024-07-19 16:47:38,867] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G227_M03_primary_unique.bam [2024-07-19 16:47:38,888] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G227_M03_primary_unique.bam.bai [2024-07-19 16:47:38,922] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G227_M03_metrics [2024-07-19 16:47:38,924] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G227_M03_metrics [2024-07-19 16:47:38,924] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G227_M03_metrics [2024-07-19 16:47:38,924] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G227_M03_metrics [2024-07-19 16:47:38,928] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G227_M03_metrics [2024-07-19 16:47:38,945] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G227_M03_hist.pdf [2024-07-19 16:47:38,949] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G227_M03_featureCounts.out [2024-07-19 16:47:38,952] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G227_M03_featureCounts.out [2024-07-19 16:47:38,952] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G227_M03_featureCounts.out [2024-07-19 16:47:38,953] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G227_M03_featureCounts.out [2024-07-19 16:47:38,956] multiqc [DEBUG ] File ignored by vep/vep_html because it exceeded search pattern filesize limit: G227_M03_featureCounts.out [2024-07-19 16:47:38,956] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G227_M03_featureCounts.out [2024-07-19 16:47:38,956] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G227_M03_featureCounts.out [2024-07-19 16:47:38,956] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: G227_M03_featureCounts.out [2024-07-19 16:47:38,956] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: G227_M03_featureCounts.out [2024-07-19 16:47:38,956] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: G227_M03_featureCounts.out [2024-07-19 16:47:38,956] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: G227_M03_featureCounts.out [2024-07-19 16:47:38,956] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: G227_M03_featureCounts.out [2024-07-19 16:47:38,972] multiqc [DEBUG ] File ignored by stacks/sumstats because it exceeded search pattern filesize limit: G227_M03_featureCounts.out [2024-07-19 16:47:39,811] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G227_M03_featureCounts.out [2024-07-19 16:47:39,812] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G227_M03_featureCounts.out [2024-07-19 16:47:39,813] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G227_M03_featureCounts.out [2024-07-19 16:47:39,813] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G227_M03_featureCounts.out [2024-07-19 16:47:39,816] multiqc [DEBUG ] File ignored by vep/vep_html because it exceeded search pattern filesize limit: G227_M03_featureCounts.out [2024-07-19 16:47:39,816] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G227_M03_featureCounts.out [2024-07-19 16:47:39,816] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G227_M03_featureCounts.out [2024-07-19 16:47:39,817] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: G227_M03_featureCounts.out [2024-07-19 16:47:39,817] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: G227_M03_featureCounts.out [2024-07-19 16:47:39,817] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: G227_M03_featureCounts.out [2024-07-19 16:47:39,817] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: G227_M03_featureCounts.out [2024-07-19 16:47:39,817] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: G227_M03_featureCounts.out [2024-07-19 16:47:39,837] multiqc [DEBUG ] File ignored by stacks/sumstats because it exceeded search pattern filesize limit: G227_M03_featureCounts.out [2024-07-19 16:47:40,674] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G227_M03_metrics [2024-07-19 16:47:40,676] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G227_M03_metrics [2024-07-19 16:47:40,678] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G227_M03_metrics [2024-07-19 16:47:40,716] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G227_M04_CKDL240023967-1A_22NF25LT3_L5_1.fq.gz [2024-07-19 16:47:40,719] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G227_M04_CKDL240023967-1A_22NF25LT3_L5_2.fq.gz [2024-07-19 16:47:40,736] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G227_M04_primary_unique.bam [2024-07-19 16:47:40,771] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G227_M04_primary_unique.bam.bai [2024-07-19 16:47:40,786] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G227_M04_metrics [2024-07-19 16:47:40,787] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G227_M04_metrics [2024-07-19 16:47:40,787] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G227_M04_metrics [2024-07-19 16:47:40,787] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G227_M04_metrics [2024-07-19 16:47:40,790] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G227_M04_metrics [2024-07-19 16:47:40,801] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G227_M04_hist.pdf [2024-07-19 16:47:40,816] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G227_M04_featureCounts.out [2024-07-19 16:47:40,817] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G227_M04_featureCounts.out [2024-07-19 16:47:40,817] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G227_M04_featureCounts.out [2024-07-19 16:47:40,817] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G227_M04_featureCounts.out [2024-07-19 16:47:40,820] multiqc [DEBUG ] File ignored by vep/vep_html because it exceeded search pattern filesize limit: G227_M04_featureCounts.out [2024-07-19 16:47:40,820] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G227_M04_featureCounts.out [2024-07-19 16:47:40,820] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G227_M04_featureCounts.out [2024-07-19 16:47:40,820] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: G227_M04_featureCounts.out [2024-07-19 16:47:40,820] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: G227_M04_featureCounts.out [2024-07-19 16:47:40,820] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: G227_M04_featureCounts.out [2024-07-19 16:47:40,820] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: G227_M04_featureCounts.out [2024-07-19 16:47:40,820] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: G227_M04_featureCounts.out [2024-07-19 16:47:40,837] multiqc [DEBUG ] File ignored by stacks/sumstats because it exceeded search pattern filesize limit: G227_M04_featureCounts.out [2024-07-19 16:47:41,716] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G227_M04_featureCounts.out [2024-07-19 16:47:41,718] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G227_M04_featureCounts.out [2024-07-19 16:47:41,718] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G227_M04_featureCounts.out [2024-07-19 16:47:41,718] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G227_M04_featureCounts.out [2024-07-19 16:47:41,721] multiqc [DEBUG ] File ignored by vep/vep_html because it exceeded search pattern filesize limit: G227_M04_featureCounts.out [2024-07-19 16:47:41,721] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G227_M04_featureCounts.out [2024-07-19 16:47:41,721] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G227_M04_featureCounts.out [2024-07-19 16:47:41,721] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: G227_M04_featureCounts.out [2024-07-19 16:47:41,721] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: G227_M04_featureCounts.out [2024-07-19 16:47:41,721] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: G227_M04_featureCounts.out [2024-07-19 16:47:41,721] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: G227_M04_featureCounts.out [2024-07-19 16:47:41,721] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: G227_M04_featureCounts.out [2024-07-19 16:47:41,738] multiqc [DEBUG ] File ignored by stacks/sumstats because it exceeded search pattern filesize limit: G227_M04_featureCounts.out [2024-07-19 16:47:42,607] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G227_M04_metrics [2024-07-19 16:47:42,610] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G227_M04_metrics [2024-07-19 16:47:42,615] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G227_M04_metrics [2024-07-19 16:47:42,660] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G227_M22_CKDL240023967-1A_22NF25LT3_L5_2.fq.gz [2024-07-19 16:47:42,663] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G227_M22_CKDL240023967-1A_22NF25LT3_L5_1.fq.gz [2024-07-19 16:47:42,663] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G227_M22_primary_unique.bam.bai [2024-07-19 16:47:42,740] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G227_M22_primary_unique.bam [2024-07-19 16:47:42,762] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G227_M22_metrics [2024-07-19 16:47:42,763] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G227_M22_metrics [2024-07-19 16:47:42,764] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G227_M22_metrics [2024-07-19 16:47:42,764] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G227_M22_metrics [2024-07-19 16:47:42,767] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G227_M22_metrics [2024-07-19 16:47:42,784] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G227_M22_hist.pdf [2024-07-19 16:47:42,789] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G227_M22_featureCounts.out [2024-07-19 16:47:42,791] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G227_M22_featureCounts.out [2024-07-19 16:47:42,791] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G227_M22_featureCounts.out [2024-07-19 16:47:42,791] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G227_M22_featureCounts.out [2024-07-19 16:47:42,795] multiqc [DEBUG ] File ignored by vep/vep_html because it exceeded search pattern filesize limit: G227_M22_featureCounts.out [2024-07-19 16:47:42,795] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G227_M22_featureCounts.out [2024-07-19 16:47:42,795] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G227_M22_featureCounts.out [2024-07-19 16:47:42,795] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: G227_M22_featureCounts.out [2024-07-19 16:47:42,795] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: G227_M22_featureCounts.out [2024-07-19 16:47:42,795] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: G227_M22_featureCounts.out [2024-07-19 16:47:42,795] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: G227_M22_featureCounts.out [2024-07-19 16:47:42,796] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: G227_M22_featureCounts.out [2024-07-19 16:47:42,814] multiqc [DEBUG ] File ignored by stacks/sumstats because it exceeded search pattern filesize limit: G227_M22_featureCounts.out [2024-07-19 16:47:43,692] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G227_M22_featureCounts.out [2024-07-19 16:47:43,695] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G227_M22_featureCounts.out [2024-07-19 16:47:43,696] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G227_M22_featureCounts.out [2024-07-19 16:47:43,696] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G227_M22_featureCounts.out [2024-07-19 16:47:43,701] multiqc [DEBUG ] File ignored by vep/vep_html because it exceeded search pattern filesize limit: G227_M22_featureCounts.out [2024-07-19 16:47:43,701] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G227_M22_featureCounts.out [2024-07-19 16:47:43,701] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G227_M22_featureCounts.out [2024-07-19 16:47:43,701] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: G227_M22_featureCounts.out [2024-07-19 16:47:43,702] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: G227_M22_featureCounts.out [2024-07-19 16:47:43,702] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: G227_M22_featureCounts.out [2024-07-19 16:47:43,702] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: G227_M22_featureCounts.out [2024-07-19 16:47:43,702] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: G227_M22_featureCounts.out [2024-07-19 16:47:43,721] multiqc [DEBUG ] File ignored by stacks/sumstats because it exceeded search pattern filesize limit: G227_M22_featureCounts.out [2024-07-19 16:47:44,563] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G227_M22_metrics [2024-07-19 16:47:44,566] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G227_M22_metrics [2024-07-19 16:47:44,570] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G227_M22_metrics [2024-07-19 16:47:44,614] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G227_M23_CKDL240023967-1A_22NF25LT3_L5_1.fq.gz [2024-07-19 16:47:44,617] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G227_M23_CKDL240023967-1A_22NF25LT3_L5_2.fq.gz [2024-07-19 16:47:44,677] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G227_M23_primary_unique.bam.bai [2024-07-19 16:47:44,677] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G227_M23_primary_unique.bam [2024-07-19 16:47:44,710] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G227_M23_metrics [2024-07-19 16:47:44,712] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G227_M23_metrics [2024-07-19 16:47:44,712] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G227_M23_metrics [2024-07-19 16:47:44,712] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G227_M23_metrics [2024-07-19 16:47:44,717] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G227_M23_metrics [2024-07-19 16:47:44,731] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G227_M23_hist.pdf [2024-07-19 16:47:44,756] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G227_M23_featureCounts.out [2024-07-19 16:47:44,759] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G227_M23_featureCounts.out [2024-07-19 16:47:44,759] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G227_M23_featureCounts.out [2024-07-19 16:47:44,759] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G227_M23_featureCounts.out [2024-07-19 16:47:44,763] multiqc [DEBUG ] File ignored by vep/vep_html because it exceeded search pattern filesize limit: G227_M23_featureCounts.out [2024-07-19 16:47:44,763] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G227_M23_featureCounts.out [2024-07-19 16:47:44,763] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G227_M23_featureCounts.out [2024-07-19 16:47:44,763] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: G227_M23_featureCounts.out [2024-07-19 16:47:44,763] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: G227_M23_featureCounts.out [2024-07-19 16:47:44,763] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: G227_M23_featureCounts.out [2024-07-19 16:47:44,763] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: G227_M23_featureCounts.out [2024-07-19 16:47:44,763] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: G227_M23_featureCounts.out [2024-07-19 16:47:44,779] multiqc [DEBUG ] File ignored by stacks/sumstats because it exceeded search pattern filesize limit: G227_M23_featureCounts.out [2024-07-19 16:47:45,619] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G227_M23_featureCounts.out [2024-07-19 16:47:45,621] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G227_M23_featureCounts.out [2024-07-19 16:47:45,621] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G227_M23_featureCounts.out [2024-07-19 16:47:45,621] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G227_M23_featureCounts.out [2024-07-19 16:47:45,624] multiqc [DEBUG ] File ignored by vep/vep_html because it exceeded search pattern filesize limit: G227_M23_featureCounts.out [2024-07-19 16:47:45,624] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G227_M23_featureCounts.out [2024-07-19 16:47:45,624] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G227_M23_featureCounts.out [2024-07-19 16:47:45,624] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: G227_M23_featureCounts.out [2024-07-19 16:47:45,624] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: G227_M23_featureCounts.out [2024-07-19 16:47:45,624] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: G227_M23_featureCounts.out [2024-07-19 16:47:45,624] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: G227_M23_featureCounts.out [2024-07-19 16:47:45,624] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: G227_M23_featureCounts.out [2024-07-19 16:47:45,651] multiqc [DEBUG ] File ignored by stacks/sumstats because it exceeded search pattern filesize limit: G227_M23_featureCounts.out [2024-07-19 16:47:46,485] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G227_M23_metrics [2024-07-19 16:47:46,488] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G227_M23_metrics [2024-07-19 16:47:46,492] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G227_M23_metrics [2024-07-19 16:47:46,531] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G227_M24_CKDL240023967-1A_22NF25LT3_L5_2.fq.gz [2024-07-19 16:47:46,533] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G227_M24_CKDL240023967-1A_22NF25LT3_L5_1.fq.gz [2024-07-19 16:47:46,534] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G227_M24_primary_unique.bam.bai [2024-07-19 16:47:46,592] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G227_M24_primary_unique.bam [2024-07-19 16:47:46,628] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G227_M24_metrics [2024-07-19 16:47:46,630] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G227_M24_metrics [2024-07-19 16:47:46,630] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G227_M24_metrics [2024-07-19 16:47:46,630] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G227_M24_metrics [2024-07-19 16:47:46,633] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G227_M24_metrics [2024-07-19 16:47:46,653] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G227_M24_hist.pdf [2024-07-19 16:47:46,677] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G227_M24_featureCounts.out [2024-07-19 16:47:46,680] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G227_M24_featureCounts.out [2024-07-19 16:47:46,681] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G227_M24_featureCounts.out [2024-07-19 16:47:46,681] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G227_M24_featureCounts.out [2024-07-19 16:47:46,686] multiqc [DEBUG ] File ignored by vep/vep_html because it exceeded search pattern filesize limit: G227_M24_featureCounts.out [2024-07-19 16:47:46,686] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G227_M24_featureCounts.out [2024-07-19 16:47:46,686] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G227_M24_featureCounts.out [2024-07-19 16:47:46,686] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: G227_M24_featureCounts.out [2024-07-19 16:47:46,686] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: G227_M24_featureCounts.out [2024-07-19 16:47:46,687] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: G227_M24_featureCounts.out [2024-07-19 16:47:46,687] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: G227_M24_featureCounts.out [2024-07-19 16:47:46,687] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: G227_M24_featureCounts.out [2024-07-19 16:47:46,706] multiqc [DEBUG ] File ignored by stacks/sumstats because it exceeded search pattern filesize limit: G227_M24_featureCounts.out [2024-07-19 16:47:47,554] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G227_M24_featureCounts.out [2024-07-19 16:47:47,557] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G227_M24_featureCounts.out [2024-07-19 16:47:47,557] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G227_M24_featureCounts.out [2024-07-19 16:47:47,557] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G227_M24_featureCounts.out [2024-07-19 16:47:47,561] multiqc [DEBUG ] File ignored by vep/vep_html because it exceeded search pattern filesize limit: G227_M24_featureCounts.out [2024-07-19 16:47:47,561] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G227_M24_featureCounts.out [2024-07-19 16:47:47,561] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G227_M24_featureCounts.out [2024-07-19 16:47:47,561] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: G227_M24_featureCounts.out [2024-07-19 16:47:47,561] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: G227_M24_featureCounts.out [2024-07-19 16:47:47,561] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: G227_M24_featureCounts.out [2024-07-19 16:47:47,561] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: G227_M24_featureCounts.out [2024-07-19 16:47:47,562] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: G227_M24_featureCounts.out [2024-07-19 16:47:47,579] multiqc [DEBUG ] File ignored by stacks/sumstats because it exceeded search pattern filesize limit: G227_M24_featureCounts.out [2024-07-19 16:47:48,434] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G227_M24_metrics [2024-07-19 16:47:48,437] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G227_M24_metrics [2024-07-19 16:47:48,442] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G227_M24_metrics [2024-07-19 16:47:48,483] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G227_M25_CKDL240023967-1A_22NF25LT3_L5_2.fq.gz [2024-07-19 16:47:48,486] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G227_M25_CKDL240023967-1A_22NF25LT3_L5_1.fq.gz [2024-07-19 16:47:48,535] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G227_M25_primary_unique.bam.bai [2024-07-19 16:47:48,566] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G227_M25_primary_unique.bam [2024-07-19 16:47:48,572] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G227_M25_metrics [2024-07-19 16:47:48,574] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G227_M25_metrics [2024-07-19 16:47:48,574] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G227_M25_metrics [2024-07-19 16:47:48,574] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G227_M25_metrics [2024-07-19 16:47:48,578] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G227_M25_metrics [2024-07-19 16:47:48,604] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G227_M25_hist.pdf [2024-07-19 16:47:48,624] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G227_M25_featureCounts.out [2024-07-19 16:47:48,626] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G227_M25_featureCounts.out [2024-07-19 16:47:48,626] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G227_M25_featureCounts.out [2024-07-19 16:47:48,626] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G227_M25_featureCounts.out [2024-07-19 16:47:48,629] multiqc [DEBUG ] File ignored by vep/vep_html because it exceeded search pattern filesize limit: G227_M25_featureCounts.out [2024-07-19 16:47:48,629] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G227_M25_featureCounts.out [2024-07-19 16:47:48,629] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G227_M25_featureCounts.out [2024-07-19 16:47:48,629] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: G227_M25_featureCounts.out [2024-07-19 16:47:48,629] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: G227_M25_featureCounts.out [2024-07-19 16:47:48,629] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: G227_M25_featureCounts.out [2024-07-19 16:47:48,629] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: G227_M25_featureCounts.out [2024-07-19 16:47:48,629] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: G227_M25_featureCounts.out [2024-07-19 16:47:48,645] multiqc [DEBUG ] File ignored by stacks/sumstats because it exceeded search pattern filesize limit: G227_M25_featureCounts.out [2024-07-19 16:47:49,485] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G227_M25_featureCounts.out [2024-07-19 16:47:49,487] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G227_M25_featureCounts.out [2024-07-19 16:47:49,488] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G227_M25_featureCounts.out [2024-07-19 16:47:49,488] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G227_M25_featureCounts.out [2024-07-19 16:47:49,491] multiqc [DEBUG ] File ignored by vep/vep_html because it exceeded search pattern filesize limit: G227_M25_featureCounts.out [2024-07-19 16:47:49,491] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G227_M25_featureCounts.out [2024-07-19 16:47:49,491] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G227_M25_featureCounts.out [2024-07-19 16:47:49,491] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: G227_M25_featureCounts.out [2024-07-19 16:47:49,491] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: G227_M25_featureCounts.out [2024-07-19 16:47:49,491] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: G227_M25_featureCounts.out [2024-07-19 16:47:49,491] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: G227_M25_featureCounts.out [2024-07-19 16:47:49,491] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: G227_M25_featureCounts.out [2024-07-19 16:47:49,507] multiqc [DEBUG ] File ignored by stacks/sumstats because it exceeded search pattern filesize limit: G227_M25_featureCounts.out [2024-07-19 16:47:50,345] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G227_M25_metrics [2024-07-19 16:47:50,347] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G227_M25_metrics [2024-07-19 16:47:50,352] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G227_M25_metrics [2024-07-19 16:47:50,405] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G227_M26_CKDL240023967-1A_22NF25LT3_L5_2.fq.gz [2024-07-19 16:47:50,408] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G227_M26_CKDL240023967-1A_22NF25LT3_L5_1.fq.gz [2024-07-19 16:47:50,466] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G227_M26_primary_unique.bam [2024-07-19 16:47:50,466] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G227_M26_primary_unique.bam.bai [2024-07-19 16:47:50,507] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G227_M26_metrics [2024-07-19 16:47:50,509] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G227_M26_metrics [2024-07-19 16:47:50,509] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G227_M26_metrics [2024-07-19 16:47:50,509] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G227_M26_metrics [2024-07-19 16:47:50,513] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G227_M26_metrics [2024-07-19 16:47:50,525] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G227_M26_hist.pdf [2024-07-19 16:47:50,546] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G227_M26_featureCounts.out [2024-07-19 16:47:50,548] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G227_M26_featureCounts.out [2024-07-19 16:47:50,548] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G227_M26_featureCounts.out [2024-07-19 16:47:50,548] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G227_M26_featureCounts.out [2024-07-19 16:47:50,552] multiqc [DEBUG ] File ignored by vep/vep_html because it exceeded search pattern filesize limit: G227_M26_featureCounts.out [2024-07-19 16:47:50,552] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G227_M26_featureCounts.out [2024-07-19 16:47:50,552] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G227_M26_featureCounts.out [2024-07-19 16:47:50,552] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: G227_M26_featureCounts.out [2024-07-19 16:47:50,552] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: G227_M26_featureCounts.out [2024-07-19 16:47:50,552] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: G227_M26_featureCounts.out [2024-07-19 16:47:50,552] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: G227_M26_featureCounts.out [2024-07-19 16:47:50,553] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: G227_M26_featureCounts.out [2024-07-19 16:47:50,569] multiqc [DEBUG ] File ignored by stacks/sumstats because it exceeded search pattern filesize limit: G227_M26_featureCounts.out [2024-07-19 16:47:51,436] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G227_M26_featureCounts.out [2024-07-19 16:47:51,438] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G227_M26_featureCounts.out [2024-07-19 16:47:51,438] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G227_M26_featureCounts.out [2024-07-19 16:47:51,438] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G227_M26_featureCounts.out [2024-07-19 16:47:51,442] multiqc [DEBUG ] File ignored by vep/vep_html because it exceeded search pattern filesize limit: G227_M26_featureCounts.out [2024-07-19 16:47:51,442] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G227_M26_featureCounts.out [2024-07-19 16:47:51,442] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G227_M26_featureCounts.out [2024-07-19 16:47:51,442] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: G227_M26_featureCounts.out [2024-07-19 16:47:51,442] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: G227_M26_featureCounts.out [2024-07-19 16:47:51,442] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: G227_M26_featureCounts.out [2024-07-19 16:47:51,442] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: G227_M26_featureCounts.out [2024-07-19 16:47:51,442] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: G227_M26_featureCounts.out [2024-07-19 16:47:51,458] multiqc [DEBUG ] File ignored by stacks/sumstats because it exceeded search pattern filesize limit: G227_M26_featureCounts.out [2024-07-19 16:47:52,299] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G227_M26_metrics [2024-07-19 16:47:52,301] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G227_M26_metrics [2024-07-19 16:47:52,304] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G227_M26_metrics [2024-07-19 16:47:52,348] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G227_M10_CKDL240023967-1A_22NF25LT3_L5_2.fq.gz [2024-07-19 16:47:52,350] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G227_M10_CKDL240023967-1A_22NF25LT3_L5_1.fq.gz [2024-07-19 16:47:52,402] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G227_M10_primary_unique.bam.bai [2024-07-19 16:47:52,415] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G227_M10_primary_unique.bam [2024-07-19 16:47:52,430] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G227_M10_metrics [2024-07-19 16:47:52,431] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G227_M10_metrics [2024-07-19 16:47:52,431] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G227_M10_metrics [2024-07-19 16:47:52,431] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G227_M10_metrics [2024-07-19 16:47:52,436] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G227_M10_metrics [2024-07-19 16:47:52,456] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G227_M10_hist.pdf [2024-07-19 16:47:52,459] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G227_M10_featureCounts.out [2024-07-19 16:47:52,460] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G227_M10_featureCounts.out [2024-07-19 16:47:52,460] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G227_M10_featureCounts.out [2024-07-19 16:47:52,460] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G227_M10_featureCounts.out [2024-07-19 16:47:52,463] multiqc [DEBUG ] File ignored by vep/vep_html because it exceeded search pattern filesize limit: G227_M10_featureCounts.out [2024-07-19 16:47:52,463] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G227_M10_featureCounts.out [2024-07-19 16:47:52,463] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G227_M10_featureCounts.out [2024-07-19 16:47:52,463] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: G227_M10_featureCounts.out [2024-07-19 16:47:52,463] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: G227_M10_featureCounts.out [2024-07-19 16:47:52,463] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: G227_M10_featureCounts.out [2024-07-19 16:47:52,463] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: G227_M10_featureCounts.out [2024-07-19 16:47:52,463] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: G227_M10_featureCounts.out [2024-07-19 16:47:52,480] multiqc [DEBUG ] File ignored by stacks/sumstats because it exceeded search pattern filesize limit: G227_M10_featureCounts.out [2024-07-19 16:47:53,376] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G227_M10_featureCounts.out [2024-07-19 16:47:53,378] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G227_M10_featureCounts.out [2024-07-19 16:47:53,378] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G227_M10_featureCounts.out [2024-07-19 16:47:53,378] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G227_M10_featureCounts.out [2024-07-19 16:47:53,381] multiqc [DEBUG ] File ignored by vep/vep_html because it exceeded search pattern filesize limit: G227_M10_featureCounts.out [2024-07-19 16:47:53,381] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G227_M10_featureCounts.out [2024-07-19 16:47:53,381] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G227_M10_featureCounts.out [2024-07-19 16:47:53,381] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: G227_M10_featureCounts.out [2024-07-19 16:47:53,381] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: G227_M10_featureCounts.out [2024-07-19 16:47:53,381] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: G227_M10_featureCounts.out [2024-07-19 16:47:53,381] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: G227_M10_featureCounts.out [2024-07-19 16:47:53,381] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: G227_M10_featureCounts.out [2024-07-19 16:47:53,407] multiqc [DEBUG ] File ignored by stacks/sumstats because it exceeded search pattern filesize limit: G227_M10_featureCounts.out [2024-07-19 16:47:54,262] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G227_M10_metrics [2024-07-19 16:47:54,264] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G227_M10_metrics [2024-07-19 16:47:54,267] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G227_M10_metrics [2024-07-19 16:47:54,306] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G227_M11_CKDL240023967-1A_22NF25LT3_L5_2.fq.gz [2024-07-19 16:47:54,309] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G227_M11_CKDL240023967-1A_22NF25LT3_L5_1.fq.gz [2024-07-19 16:47:54,389] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G227_M11_primary_unique.bam.bai [2024-07-19 16:47:54,389] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G227_M11_primary_unique.bam [2024-07-19 16:47:54,390] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G227_M11_hist.pdf [2024-07-19 16:47:54,394] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G227_M11_metrics [2024-07-19 16:47:54,396] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G227_M11_metrics [2024-07-19 16:47:54,396] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G227_M11_metrics [2024-07-19 16:47:54,396] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G227_M11_metrics [2024-07-19 16:47:54,400] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G227_M11_metrics [2024-07-19 16:47:54,420] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G227_M11_featureCounts.out [2024-07-19 16:47:54,423] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G227_M11_featureCounts.out [2024-07-19 16:47:54,424] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G227_M11_featureCounts.out [2024-07-19 16:47:54,424] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G227_M11_featureCounts.out [2024-07-19 16:47:54,427] multiqc [DEBUG ] File ignored by vep/vep_html because it exceeded search pattern filesize limit: G227_M11_featureCounts.out [2024-07-19 16:47:54,427] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G227_M11_featureCounts.out [2024-07-19 16:47:54,428] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G227_M11_featureCounts.out [2024-07-19 16:47:54,428] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: G227_M11_featureCounts.out [2024-07-19 16:47:54,428] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: G227_M11_featureCounts.out [2024-07-19 16:47:54,428] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: G227_M11_featureCounts.out [2024-07-19 16:47:54,428] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: G227_M11_featureCounts.out [2024-07-19 16:47:54,428] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: G227_M11_featureCounts.out [2024-07-19 16:47:54,446] multiqc [DEBUG ] File ignored by stacks/sumstats because it exceeded search pattern filesize limit: G227_M11_featureCounts.out [2024-07-19 16:47:55,316] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G227_M11_featureCounts.out [2024-07-19 16:47:55,318] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G227_M11_featureCounts.out [2024-07-19 16:47:55,319] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G227_M11_featureCounts.out [2024-07-19 16:47:55,319] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G227_M11_featureCounts.out [2024-07-19 16:47:55,323] multiqc [DEBUG ] File ignored by vep/vep_html because it exceeded search pattern filesize limit: G227_M11_featureCounts.out [2024-07-19 16:47:55,323] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G227_M11_featureCounts.out [2024-07-19 16:47:55,323] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G227_M11_featureCounts.out [2024-07-19 16:47:55,323] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: G227_M11_featureCounts.out [2024-07-19 16:47:55,323] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: G227_M11_featureCounts.out [2024-07-19 16:47:55,323] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: G227_M11_featureCounts.out [2024-07-19 16:47:55,323] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: G227_M11_featureCounts.out [2024-07-19 16:47:55,323] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: G227_M11_featureCounts.out [2024-07-19 16:47:55,342] multiqc [DEBUG ] File ignored by stacks/sumstats because it exceeded search pattern filesize limit: G227_M11_featureCounts.out [2024-07-19 16:47:56,193] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G227_M11_metrics [2024-07-19 16:47:56,195] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G227_M11_metrics [2024-07-19 16:47:56,198] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G227_M11_metrics [2024-07-19 16:47:56,234] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G227_M30_CKDL240023967-1A_22NF25LT3_L5_2.fq.gz [2024-07-19 16:47:56,236] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G227_M30_CKDL240023967-1A_22NF25LT3_L5_1.fq.gz [2024-07-19 16:47:56,237] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G227_M30_primary_unique.bam [2024-07-19 16:47:56,340] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G227_M30_primary_unique.bam.bai [2024-07-19 16:47:56,340] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G227_M30_hist.pdf [2024-07-19 16:47:56,345] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G227_M30_metrics [2024-07-19 16:47:56,348] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G227_M30_metrics [2024-07-19 16:47:56,348] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G227_M30_metrics [2024-07-19 16:47:56,348] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G227_M30_metrics [2024-07-19 16:47:56,353] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G227_M30_metrics [2024-07-19 16:47:56,372] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G227_M30_featureCounts.out [2024-07-19 16:47:56,374] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G227_M30_featureCounts.out [2024-07-19 16:47:56,374] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G227_M30_featureCounts.out [2024-07-19 16:47:56,374] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G227_M30_featureCounts.out [2024-07-19 16:47:56,378] multiqc [DEBUG ] File ignored by vep/vep_html because it exceeded search pattern filesize limit: G227_M30_featureCounts.out [2024-07-19 16:47:56,379] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G227_M30_featureCounts.out [2024-07-19 16:47:56,379] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G227_M30_featureCounts.out [2024-07-19 16:47:56,379] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: G227_M30_featureCounts.out [2024-07-19 16:47:56,379] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: G227_M30_featureCounts.out [2024-07-19 16:47:56,379] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: G227_M30_featureCounts.out [2024-07-19 16:47:56,379] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: G227_M30_featureCounts.out [2024-07-19 16:47:56,379] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: G227_M30_featureCounts.out [2024-07-19 16:47:56,399] multiqc [DEBUG ] File ignored by stacks/sumstats because it exceeded search pattern filesize limit: G227_M30_featureCounts.out [2024-07-19 16:47:57,252] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G227_M30_featureCounts.out [2024-07-19 16:47:57,255] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G227_M30_featureCounts.out [2024-07-19 16:47:57,256] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G227_M30_featureCounts.out [2024-07-19 16:47:57,256] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G227_M30_featureCounts.out [2024-07-19 16:47:57,260] multiqc [DEBUG ] File ignored by vep/vep_html because it exceeded search pattern filesize limit: G227_M30_featureCounts.out [2024-07-19 16:47:57,260] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G227_M30_featureCounts.out [2024-07-19 16:47:57,260] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G227_M30_featureCounts.out [2024-07-19 16:47:57,260] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: G227_M30_featureCounts.out [2024-07-19 16:47:57,260] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: G227_M30_featureCounts.out [2024-07-19 16:47:57,260] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: G227_M30_featureCounts.out [2024-07-19 16:47:57,260] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: G227_M30_featureCounts.out [2024-07-19 16:47:57,260] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: G227_M30_featureCounts.out [2024-07-19 16:47:57,278] multiqc [DEBUG ] File ignored by stacks/sumstats because it exceeded search pattern filesize limit: G227_M30_featureCounts.out [2024-07-19 16:47:58,161] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G227_M30_metrics [2024-07-19 16:47:58,164] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G227_M30_metrics [2024-07-19 16:47:58,167] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G227_M30_metrics [2024-07-19 16:47:58,203] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Summarize_Jobs.sh [2024-07-19 16:47:58,206] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Summarize_Jobs.sh [2024-07-19 16:47:58,211] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Summarize_Jobs.sh [2024-07-19 16:47:58,223] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Parameter_Descriptions.txt [2024-07-19 16:47:58,226] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Parameter_Descriptions.txt [2024-07-19 16:47:58,230] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Parameter_Descriptions.txt [2024-07-19 16:47:58,241] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Run_Jobs.sh [2024-07-19 16:47:58,243] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Run_Jobs.sh [2024-07-19 16:47:58,261] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: FASTQC.qsub [2024-07-19 16:47:58,264] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: FASTQC.qsub [2024-07-19 16:47:58,264] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: FASTQC.qsub [2024-07-19 16:47:58,264] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: FASTQC.qsub [2024-07-19 16:47:58,268] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: FASTQC.qsub [2024-07-19 16:47:58,281] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: fastq_reads.qsub [2024-07-19 16:47:58,283] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: fastq_reads.qsub [2024-07-19 16:47:58,298] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_03_G227_G227_M12.o8768233 [2024-07-19 16:47:58,300] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_03_G227_G227_M12.o8768233 [2024-07-19 16:47:58,300] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_03_G227_G227_M12.o8768233 [2024-07-19 16:47:58,300] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_03_G227_G227_M12.o8768233 [2024-07-19 16:47:58,303] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_03_G227_G227_M12.o8768233 [2024-07-19 16:47:58,315] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_03_G227_G227_M26.o8768247 [2024-07-19 16:47:58,317] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_03_G227_G227_M26.o8768247 [2024-07-19 16:47:58,317] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_03_G227_G227_M26.o8768247 [2024-07-19 16:47:58,317] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_03_G227_G227_M26.o8768247 [2024-07-19 16:47:58,321] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_03_G227_G227_M26.o8768247 [2024-07-19 16:47:58,331] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_03_G227_G227_M13.o8768234 [2024-07-19 16:47:58,333] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_03_G227_G227_M13.o8768234 [2024-07-19 16:47:58,333] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_03_G227_G227_M13.o8768234 [2024-07-19 16:47:58,333] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_03_G227_G227_M13.o8768234 [2024-07-19 16:47:58,338] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_03_G227_G227_M13.o8768234 [2024-07-19 16:47:58,359] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_03_G227_G227_M01.o8768221 [2024-07-19 16:47:58,362] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_03_G227_G227_M01.o8768221 [2024-07-19 16:47:58,362] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_03_G227_G227_M01.o8768221 [2024-07-19 16:47:58,362] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_03_G227_G227_M01.o8768221 [2024-07-19 16:47:58,366] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_03_G227_G227_M01.o8768221 [2024-07-19 16:47:58,378] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_03_G227_G227_M02.o8768222 [2024-07-19 16:47:58,380] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_03_G227_G227_M02.o8768222 [2024-07-19 16:47:58,380] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_03_G227_G227_M02.o8768222 [2024-07-19 16:47:58,380] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_03_G227_G227_M02.o8768222 [2024-07-19 16:47:58,383] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_03_G227_G227_M02.o8768222 [2024-07-19 16:47:58,393] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_03_G227_G227_M04.o8768224 [2024-07-19 16:47:58,394] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_03_G227_G227_M04.o8768224 [2024-07-19 16:47:58,395] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_03_G227_G227_M04.o8768224 [2024-07-19 16:47:58,395] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_03_G227_G227_M04.o8768224 [2024-07-19 16:47:58,397] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_03_G227_G227_M04.o8768224 [2024-07-19 16:47:58,410] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_03_G227_G227_M24.o8768245 [2024-07-19 16:47:58,411] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_03_G227_G227_M24.o8768245 [2024-07-19 16:47:58,411] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_03_G227_G227_M24.o8768245 [2024-07-19 16:47:58,411] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_03_G227_G227_M24.o8768245 [2024-07-19 16:47:58,414] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_03_G227_G227_M24.o8768245 [2024-07-19 16:47:58,424] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_03_G227_G227_M19.o8768240 [2024-07-19 16:47:58,426] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_03_G227_G227_M19.o8768240 [2024-07-19 16:47:58,426] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_03_G227_G227_M19.o8768240 [2024-07-19 16:47:58,426] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_03_G227_G227_M19.o8768240 [2024-07-19 16:47:58,429] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_03_G227_G227_M19.o8768240 [2024-07-19 16:47:58,447] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_03_G227_G227_M25.o8768246 [2024-07-19 16:47:58,448] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_03_G227_G227_M25.o8768246 [2024-07-19 16:47:58,448] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_03_G227_G227_M25.o8768246 [2024-07-19 16:47:58,449] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_03_G227_G227_M25.o8768246 [2024-07-19 16:47:58,452] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_03_G227_G227_M25.o8768246 [2024-07-19 16:47:58,475] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_03_G227_G227_M10.o8768231 [2024-07-19 16:47:58,478] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_03_G227_G227_M10.o8768231 [2024-07-19 16:47:58,478] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_03_G227_G227_M10.o8768231 [2024-07-19 16:47:58,478] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_03_G227_G227_M10.o8768231 [2024-07-19 16:47:58,484] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_03_G227_G227_M10.o8768231 [2024-07-19 16:47:58,499] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_03_G227_G227_M21.o8768242 [2024-07-19 16:47:58,500] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_03_G227_G227_M21.o8768242 [2024-07-19 16:47:58,501] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_03_G227_G227_M21.o8768242 [2024-07-19 16:47:58,501] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_03_G227_G227_M21.o8768242 [2024-07-19 16:47:58,504] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_03_G227_G227_M21.o8768242 [2024-07-19 16:47:58,514] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_03_G227_G227_M22.o8768243 [2024-07-19 16:47:58,516] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_03_G227_G227_M22.o8768243 [2024-07-19 16:47:58,516] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_03_G227_G227_M22.o8768243 [2024-07-19 16:47:58,516] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_03_G227_G227_M22.o8768243 [2024-07-19 16:47:58,519] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_03_G227_G227_M22.o8768243 [2024-07-19 16:47:58,532] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_03_G227_G227_M07.o8768227 [2024-07-19 16:47:58,534] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_03_G227_G227_M07.o8768227 [2024-07-19 16:47:58,534] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_03_G227_G227_M07.o8768227 [2024-07-19 16:47:58,534] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_03_G227_G227_M07.o8768227 [2024-07-19 16:47:58,537] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_03_G227_G227_M07.o8768227 [2024-07-19 16:47:58,554] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_03_G227_G227_M29.o8768250 [2024-07-19 16:47:58,557] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_03_G227_G227_M29.o8768250 [2024-07-19 16:47:58,557] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_03_G227_G227_M29.o8768250 [2024-07-19 16:47:58,557] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_03_G227_G227_M29.o8768250 [2024-07-19 16:47:58,562] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_03_G227_G227_M29.o8768250 [2024-07-19 16:47:58,576] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_03_G227_G227_M17.o8768238 [2024-07-19 16:47:58,579] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_03_G227_G227_M17.o8768238 [2024-07-19 16:47:58,579] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_03_G227_G227_M17.o8768238 [2024-07-19 16:47:58,579] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_03_G227_G227_M17.o8768238 [2024-07-19 16:47:58,583] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_03_G227_G227_M17.o8768238 [2024-07-19 16:47:58,599] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_03_G227_G227_M23.o8768244 [2024-07-19 16:47:58,602] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_03_G227_G227_M23.o8768244 [2024-07-19 16:47:58,602] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_03_G227_G227_M23.o8768244 [2024-07-19 16:47:58,602] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_03_G227_G227_M23.o8768244 [2024-07-19 16:47:58,607] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_03_G227_G227_M23.o8768244 [2024-07-19 16:47:58,623] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_03_G227_G227_M08.o8768228 [2024-07-19 16:47:58,625] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_03_G227_G227_M08.o8768228 [2024-07-19 16:47:58,625] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_03_G227_G227_M08.o8768228 [2024-07-19 16:47:58,626] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_03_G227_G227_M08.o8768228 [2024-07-19 16:47:58,630] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_03_G227_G227_M08.o8768228 [2024-07-19 16:47:58,645] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_03_G227_G227_M20.o8768241 [2024-07-19 16:47:58,647] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_03_G227_G227_M20.o8768241 [2024-07-19 16:47:58,647] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_03_G227_G227_M20.o8768241 [2024-07-19 16:47:58,647] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_03_G227_G227_M20.o8768241 [2024-07-19 16:47:58,651] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_03_G227_G227_M20.o8768241 [2024-07-19 16:47:58,664] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_03_G227_G227_M09.o8768229 [2024-07-19 16:47:58,666] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_03_G227_G227_M09.o8768229 [2024-07-19 16:47:58,667] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_03_G227_G227_M09.o8768229 [2024-07-19 16:47:58,667] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_03_G227_G227_M09.o8768229 [2024-07-19 16:47:58,670] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_03_G227_G227_M09.o8768229 [2024-07-19 16:47:58,682] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_03_G227_G227_M06.o8768226 [2024-07-19 16:47:58,684] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_03_G227_G227_M06.o8768226 [2024-07-19 16:47:58,684] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_03_G227_G227_M06.o8768226 [2024-07-19 16:47:58,684] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_03_G227_G227_M06.o8768226 [2024-07-19 16:47:58,688] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_03_G227_G227_M06.o8768226 [2024-07-19 16:47:58,700] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_03_G227_G227_M11.o8768232 [2024-07-19 16:47:58,703] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_03_G227_G227_M11.o8768232 [2024-07-19 16:47:58,703] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_03_G227_G227_M11.o8768232 [2024-07-19 16:47:58,703] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_03_G227_G227_M11.o8768232 [2024-07-19 16:47:58,708] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_03_G227_G227_M11.o8768232 [2024-07-19 16:47:58,720] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_03_G227_G227_M15.o8768236 [2024-07-19 16:47:58,722] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_03_G227_G227_M15.o8768236 [2024-07-19 16:47:58,722] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_03_G227_G227_M15.o8768236 [2024-07-19 16:47:58,722] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_03_G227_G227_M15.o8768236 [2024-07-19 16:47:58,726] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_03_G227_G227_M15.o8768236 [2024-07-19 16:47:58,738] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_03_G227_G227_M30.o8768251 [2024-07-19 16:47:58,739] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_03_G227_G227_M30.o8768251 [2024-07-19 16:47:58,740] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_03_G227_G227_M30.o8768251 [2024-07-19 16:47:58,740] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_03_G227_G227_M30.o8768251 [2024-07-19 16:47:58,743] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_03_G227_G227_M30.o8768251 [2024-07-19 16:47:58,754] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_03_G227_G227_M03.o8768223 [2024-07-19 16:47:58,756] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_03_G227_G227_M03.o8768223 [2024-07-19 16:47:58,756] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_03_G227_G227_M03.o8768223 [2024-07-19 16:47:58,756] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_03_G227_G227_M03.o8768223 [2024-07-19 16:47:58,759] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_03_G227_G227_M03.o8768223 [2024-07-19 16:47:58,773] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_03_G227_G227_M27.o8768248 [2024-07-19 16:47:58,776] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_03_G227_G227_M27.o8768248 [2024-07-19 16:47:58,776] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_03_G227_G227_M27.o8768248 [2024-07-19 16:47:58,776] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_03_G227_G227_M27.o8768248 [2024-07-19 16:47:58,781] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_03_G227_G227_M27.o8768248 [2024-07-19 16:47:58,797] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_03_G227_G227_M05.o8768225 [2024-07-19 16:47:58,800] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_03_G227_G227_M05.o8768225 [2024-07-19 16:47:58,800] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_03_G227_G227_M05.o8768225 [2024-07-19 16:47:58,800] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: 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[DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_03_G227_G227_M14.o8768235 [2024-07-19 16:47:58,860] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_03_G227_G227_M14.o8768235 [2024-07-19 16:47:58,861] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_03_G227_G227_M14.o8768235 [2024-07-19 16:47:58,861] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_03_G227_G227_M14.o8768235 [2024-07-19 16:47:58,865] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_03_G227_G227_M14.o8768235 [2024-07-19 16:47:58,877] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_03_G227_G227_M16.o8768237 [2024-07-19 16:47:58,879] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_03_G227_G227_M16.o8768237 [2024-07-19 16:47:58,879] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_03_G227_G227_M16.o8768237 [2024-07-19 16:47:58,880] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_03_G227_G227_M16.o8768237 [2024-07-19 16:47:58,884] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_03_G227_G227_M16.o8768237 [2024-07-19 16:47:58,898] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_03_G227_G227_M28.o8768249 [2024-07-19 16:47:58,901] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_03_G227_G227_M28.o8768249 [2024-07-19 16:47:58,901] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_03_G227_G227_M28.o8768249 [2024-07-19 16:47:58,901] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_03_G227_G227_M28.o8768249 [2024-07-19 16:47:58,906] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_03_G227_G227_M28.o8768249 [2024-07-19 16:47:59,366] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: number_of_unique_reads.csv [2024-07-19 16:47:59,369] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: number_of_unique_reads.csv [2024-07-19 16:47:59,369] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: number_of_unique_reads.csv [2024-07-19 16:47:59,369] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: number_of_unique_reads.csv [2024-07-19 16:47:59,374] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: number_of_unique_reads.csv [2024-07-19 16:47:59,449] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: fastp.html [2024-07-19 16:47:59,452] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: fastp.html [2024-07-19 16:47:59,452] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: fastp.html [2024-07-19 16:47:59,452] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: fastp.html [2024-07-19 16:47:59,457] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: fastp.html [2024-07-19 16:47:59,457] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: fastp.html [2024-07-19 16:47:59,559] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G227_M23_CKDL240023967-1A_22NF25LT3_L5_1_fastqc.html [2024-07-19 16:47:59,562] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G227_M23_CKDL240023967-1A_22NF25LT3_L5_1_fastqc.html [2024-07-19 16:47:59,562] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G227_M23_CKDL240023967-1A_22NF25LT3_L5_1_fastqc.html [2024-07-19 16:47:59,563] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G227_M23_CKDL240023967-1A_22NF25LT3_L5_1_fastqc.html [2024-07-19 16:47:59,567] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G227_M23_CKDL240023967-1A_22NF25LT3_L5_1_fastqc.html [2024-07-19 16:47:59,567] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G227_M23_CKDL240023967-1A_22NF25LT3_L5_1_fastqc.html [2024-07-19 16:47:59,567] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: G227_M23_CKDL240023967-1A_22NF25LT3_L5_1_fastqc.html [2024-07-19 16:47:59,567] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: G227_M23_CKDL240023967-1A_22NF25LT3_L5_1_fastqc.html [2024-07-19 16:47:59,567] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: G227_M23_CKDL240023967-1A_22NF25LT3_L5_1_fastqc.html [2024-07-19 16:47:59,567] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: G227_M23_CKDL240023967-1A_22NF25LT3_L5_1_fastqc.html [2024-07-19 16:47:59,567] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: G227_M23_CKDL240023967-1A_22NF25LT3_L5_1_fastqc.html [2024-07-19 16:47:59,641] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G227_M23_CKDL240023967-1A_22NF25LT3_L5_2_fastqc.html [2024-07-19 16:47:59,643] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G227_M23_CKDL240023967-1A_22NF25LT3_L5_2_fastqc.html [2024-07-19 16:47:59,643] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G227_M23_CKDL240023967-1A_22NF25LT3_L5_2_fastqc.html [2024-07-19 16:47:59,643] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G227_M23_CKDL240023967-1A_22NF25LT3_L5_2_fastqc.html [2024-07-19 16:47:59,647] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G227_M23_CKDL240023967-1A_22NF25LT3_L5_2_fastqc.html [2024-07-19 16:47:59,647] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G227_M23_CKDL240023967-1A_22NF25LT3_L5_2_fastqc.html [2024-07-19 16:47:59,647] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: 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16:48:07,598] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_06_G227_RELAXPARAMS_G227_M14.o8780423 [2024-07-19 16:48:07,598] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_06_G227_RELAXPARAMS_G227_M14.o8780423 [2024-07-19 16:48:07,598] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_06_G227_RELAXPARAMS_G227_M14.o8780423 [2024-07-19 16:48:07,603] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_06_G227_RELAXPARAMS_G227_M14.o8780423 [2024-07-19 16:48:07,616] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_06_G227_RELAXPARAMS_G227_M22.o8780431 [2024-07-19 16:48:07,618] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_06_G227_RELAXPARAMS_G227_M22.o8780431 [2024-07-19 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16:48:07,639] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_06_G227_RELAXPARAMS_G227_M09.o8780418 [2024-07-19 16:48:07,642] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_06_G227_RELAXPARAMS_G227_M09.o8780418 [2024-07-19 16:48:07,654] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_06_G227_RELAXPARAMS_G227_M04.o8780413 [2024-07-19 16:48:07,655] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_06_G227_RELAXPARAMS_G227_M04.o8780413 [2024-07-19 16:48:07,655] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_06_G227_RELAXPARAMS_G227_M04.o8780413 [2024-07-19 16:48:07,656] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_06_G227_RELAXPARAMS_G227_M04.o8780413 [2024-07-19 16:48:07,660] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_06_G227_RELAXPARAMS_G227_M04.o8780413 [2024-07-19 16:48:07,671] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_06_G227_RELAXPARAMS_G227_M24.o8780433 [2024-07-19 16:48:07,672] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_06_G227_RELAXPARAMS_G227_M24.o8780433 [2024-07-19 16:48:07,673] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_06_G227_RELAXPARAMS_G227_M24.o8780433 [2024-07-19 16:48:07,673] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_06_G227_RELAXPARAMS_G227_M24.o8780433 [2024-07-19 16:48:07,676] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_06_G227_RELAXPARAMS_G227_M24.o8780433 [2024-07-19 16:48:07,688] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_06_G227_RELAXPARAMS_G227_M30.o8780439 [2024-07-19 16:48:07,690] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_06_G227_RELAXPARAMS_G227_M30.o8780439 [2024-07-19 16:48:07,690] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_06_G227_RELAXPARAMS_G227_M30.o8780439 [2024-07-19 16:48:07,690] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_06_G227_RELAXPARAMS_G227_M30.o8780439 [2024-07-19 16:48:07,694] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_06_G227_RELAXPARAMS_G227_M30.o8780439 [2024-07-19 16:48:07,726] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_06_G227_RELAXPARAMS_G227_M17.o8780426 [2024-07-19 16:48:07,729] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_06_G227_RELAXPARAMS_G227_M17.o8780426 [2024-07-19 16:48:07,729] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_06_G227_RELAXPARAMS_G227_M17.o8780426 [2024-07-19 16:48:07,729] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_06_G227_RELAXPARAMS_G227_M17.o8780426 [2024-07-19 16:48:07,735] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_06_G227_RELAXPARAMS_G227_M17.o8780426 [2024-07-19 16:48:07,749] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_06_G227_RELAXPARAMS_G227_M29.o8780438 [2024-07-19 16:48:07,751] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_06_G227_RELAXPARAMS_G227_M29.o8780438 [2024-07-19 16:48:07,751] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_06_G227_RELAXPARAMS_G227_M29.o8780438 [2024-07-19 16:48:07,751] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_06_G227_RELAXPARAMS_G227_M29.o8780438 [2024-07-19 16:48:07,755] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_06_G227_RELAXPARAMS_G227_M29.o8780438 [2024-07-19 16:48:07,769] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_06_G227_RELAXPARAMS_G227_M26.o8780435 [2024-07-19 16:48:07,770] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_06_G227_RELAXPARAMS_G227_M26.o8780435 [2024-07-19 16:48:07,771] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_06_G227_RELAXPARAMS_G227_M26.o8780435 [2024-07-19 16:48:07,771] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_06_G227_RELAXPARAMS_G227_M26.o8780435 [2024-07-19 16:48:07,774] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_06_G227_RELAXPARAMS_G227_M26.o8780435 [2024-07-19 16:48:07,789] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_06_G227_RELAXPARAMS_G227_M03.o8780412 [2024-07-19 16:48:07,791] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_06_G227_RELAXPARAMS_G227_M03.o8780412 [2024-07-19 16:48:07,791] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_06_G227_RELAXPARAMS_G227_M03.o8780412 [2024-07-19 16:48:07,791] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_06_G227_RELAXPARAMS_G227_M03.o8780412 [2024-07-19 16:48:07,797] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_06_G227_RELAXPARAMS_G227_M03.o8780412 [2024-07-19 16:48:07,833] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_06_G227_RELAXPARAMS_G227_M13.o8780422 [2024-07-19 16:48:07,836] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_06_G227_RELAXPARAMS_G227_M13.o8780422 [2024-07-19 16:48:07,836] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_06_G227_RELAXPARAMS_G227_M13.o8780422 [2024-07-19 16:48:07,836] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_06_G227_RELAXPARAMS_G227_M13.o8780422 [2024-07-19 16:48:07,842] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_06_G227_RELAXPARAMS_G227_M13.o8780422 [2024-07-19 16:48:07,859] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_06_G227_RELAXPARAMS_G227_M16.o8780425 [2024-07-19 16:48:07,860] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_06_G227_RELAXPARAMS_G227_M16.o8780425 [2024-07-19 16:48:07,861] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_06_G227_RELAXPARAMS_G227_M16.o8780425 [2024-07-19 16:48:07,861] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_06_G227_RELAXPARAMS_G227_M16.o8780425 [2024-07-19 16:48:07,865] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_06_G227_RELAXPARAMS_G227_M16.o8780425 [2024-07-19 16:48:07,900] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_06_G227_RELAXPARAMS_G227_M07.o8780416 [2024-07-19 16:48:07,903] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_06_G227_RELAXPARAMS_G227_M07.o8780416 [2024-07-19 16:48:07,903] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_06_G227_RELAXPARAMS_G227_M07.o8780416 [2024-07-19 16:48:07,903] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_06_G227_RELAXPARAMS_G227_M07.o8780416 [2024-07-19 16:48:07,908] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_06_G227_RELAXPARAMS_G227_M07.o8780416 [2024-07-19 16:48:07,922] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_06_G227_RELAXPARAMS_G227_M18.o8780427 [2024-07-19 16:48:07,923] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_06_G227_RELAXPARAMS_G227_M18.o8780427 [2024-07-19 16:48:07,924] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_06_G227_RELAXPARAMS_G227_M18.o8780427 [2024-07-19 16:48:07,924] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_06_G227_RELAXPARAMS_G227_M18.o8780427 [2024-07-19 16:48:07,928] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_06_G227_RELAXPARAMS_G227_M18.o8780427 [2024-07-19 16:48:07,941] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_06_G227_RELAXPARAMS_G227_M11.o8780420 [2024-07-19 16:48:07,943] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_06_G227_RELAXPARAMS_G227_M11.o8780420 [2024-07-19 16:48:07,943] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_06_G227_RELAXPARAMS_G227_M11.o8780420 [2024-07-19 16:48:07,943] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_06_G227_RELAXPARAMS_G227_M11.o8780420 [2024-07-19 16:48:07,947] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_06_G227_RELAXPARAMS_G227_M11.o8780420 [2024-07-19 16:48:07,976] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_06_G227_RELAXPARAMS_G227_M15.o8780424 [2024-07-19 16:48:07,979] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_06_G227_RELAXPARAMS_G227_M15.o8780424 [2024-07-19 16:48:07,980] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_06_G227_RELAXPARAMS_G227_M15.o8780424 [2024-07-19 16:48:07,980] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_06_G227_RELAXPARAMS_G227_M15.o8780424 [2024-07-19 16:48:07,985] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_06_G227_RELAXPARAMS_G227_M15.o8780424 [2024-07-19 16:48:08,001] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_06_G227_RELAXPARAMS_G227_M01.o8780410 [2024-07-19 16:48:08,003] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_06_G227_RELAXPARAMS_G227_M01.o8780410 [2024-07-19 16:48:08,003] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_06_G227_RELAXPARAMS_G227_M01.o8780410 [2024-07-19 16:48:08,003] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_06_G227_RELAXPARAMS_G227_M01.o8780410 [2024-07-19 16:48:08,008] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_06_G227_RELAXPARAMS_G227_M01.o8780410 [2024-07-19 16:48:08,022] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_06_G227_RELAXPARAMS_G227_M12.o8780421 [2024-07-19 16:48:08,025] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_06_G227_RELAXPARAMS_G227_M12.o8780421 [2024-07-19 16:48:08,026] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_06_G227_RELAXPARAMS_G227_M12.o8780421 [2024-07-19 16:48:08,026] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_06_G227_RELAXPARAMS_G227_M12.o8780421 [2024-07-19 16:48:08,032] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_06_G227_RELAXPARAMS_G227_M12.o8780421 [2024-07-19 16:48:08,050] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_06_G227_RELAXPARAMS_G227_M05.o8780414 [2024-07-19 16:48:08,053] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_06_G227_RELAXPARAMS_G227_M05.o8780414 [2024-07-19 16:48:08,053] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_06_G227_RELAXPARAMS_G227_M05.o8780414 [2024-07-19 16:48:08,053] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_06_G227_RELAXPARAMS_G227_M05.o8780414 [2024-07-19 16:48:08,060] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_06_G227_RELAXPARAMS_G227_M05.o8780414 [2024-07-19 16:48:08,078] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_06_G227_RELAXPARAMS_G227_M06.o8780415 [2024-07-19 16:48:08,080] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_06_G227_RELAXPARAMS_G227_M06.o8780415 [2024-07-19 16:48:08,080] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_06_G227_RELAXPARAMS_G227_M06.o8780415 [2024-07-19 16:48:08,080] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_06_G227_RELAXPARAMS_G227_M06.o8780415 [2024-07-19 16:48:08,084] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_06_G227_RELAXPARAMS_G227_M06.o8780415 [2024-07-19 16:48:08,098] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_06_G227_RELAXPARAMS_G227_M25.o8780434 [2024-07-19 16:48:08,101] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_06_G227_RELAXPARAMS_G227_M25.o8780434 [2024-07-19 16:48:08,101] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_06_G227_RELAXPARAMS_G227_M25.o8780434 [2024-07-19 16:48:08,101] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_06_G227_RELAXPARAMS_G227_M25.o8780434 [2024-07-19 16:48:08,105] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_06_G227_RELAXPARAMS_G227_M25.o8780434 [2024-07-19 16:48:08,118] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_06_G227_RELAXPARAMS_G227_M02.o8780411 [2024-07-19 16:48:08,120] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_06_G227_RELAXPARAMS_G227_M02.o8780411 [2024-07-19 16:48:08,121] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_06_G227_RELAXPARAMS_G227_M02.o8780411 [2024-07-19 16:48:08,121] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_06_G227_RELAXPARAMS_G227_M02.o8780411 [2024-07-19 16:48:08,125] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_06_G227_RELAXPARAMS_G227_M02.o8780411 [2024-07-19 16:48:08,137] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_06_G227_RELAXPARAMS_G227_M19.o8780428 [2024-07-19 16:48:08,140] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_06_G227_RELAXPARAMS_G227_M19.o8780428 [2024-07-19 16:48:08,140] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_06_G227_RELAXPARAMS_G227_M19.o8780428 [2024-07-19 16:48:08,140] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_06_G227_RELAXPARAMS_G227_M19.o8780428 [2024-07-19 16:48:08,145] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_06_G227_RELAXPARAMS_G227_M19.o8780428 [2024-07-19 16:48:08,161] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: CollectInsertSizeMetrics_Stats.txt [2024-07-19 16:48:08,164] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: CollectInsertSizeMetrics_Stats.txt [2024-07-19 16:48:08,169] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: CollectInsertSizeMetrics_Stats.txt [2024-07-19 16:48:08,180] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: CollectRnaSeqMetrics_Stats.txt [2024-07-19 16:48:08,183] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: CollectRnaSeqMetrics_Stats.txt [2024-07-19 16:48:08,188] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: CollectRnaSeqMetrics_Stats.txt [2024-07-19 16:48:08,198] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: CollectInsertSizeMetrics_Plots.pdf [2024-07-19 16:48:08,205] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: genes_refFlat [2024-07-19 16:48:08,208] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: genes_refFlat [2024-07-19 16:48:08,208] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: genes_refFlat [2024-07-19 16:48:08,208] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: genes_refFlat [2024-07-19 16:48:08,214] multiqc [DEBUG ] File ignored by vep/vep_html because it exceeded search pattern filesize limit: genes_refFlat [2024-07-19 16:48:08,214] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: genes_refFlat [2024-07-19 16:48:08,214] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: genes_refFlat [2024-07-19 16:48:08,214] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: genes_refFlat [2024-07-19 16:48:08,215] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: genes_refFlat [2024-07-19 16:48:08,215] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: genes_refFlat [2024-07-19 16:48:08,215] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: genes_refFlat [2024-07-19 16:48:08,215] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: genes_refFlat [2024-07-19 16:48:08,215] multiqc [DEBUG ] File ignored by snpeff because it exceeded search pattern filesize limit: genes_refFlat [2024-07-19 16:48:08,215] multiqc [DEBUG ] File ignored by stacks/sumstats because it exceeded search pattern filesize limit: genes_refFlat [2024-07-19 16:48:08,921] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: rRNA_intervalList_sorted.TOPHAT [2024-07-19 16:48:08,924] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: rRNA_intervalList_sorted.TOPHAT [2024-07-19 16:48:08,925] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: rRNA_intervalList_sorted.TOPHAT [2024-07-19 16:48:08,925] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: rRNA_intervalList_sorted.TOPHAT [2024-07-19 16:48:08,929] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: rRNA_intervalList_sorted.TOPHAT [2024-07-19 16:48:08,961] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: rRNA_intervalList_sorted.STAR [2024-07-19 16:48:08,963] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: rRNA_intervalList_sorted.STAR [2024-07-19 16:48:08,963] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: rRNA_intervalList_sorted.STAR [2024-07-19 16:48:08,963] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: rRNA_intervalList_sorted.STAR [2024-07-19 16:48:08,966] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: rRNA_intervalList_sorted.STAR [2024-07-19 16:48:09,490] multiqc.plots.bargraph [DEBUG ] Using matplotlib version 3.4.3 [2024-07-19 16:48:09,492] multiqc.plots.linegraph [DEBUG ] Using matplotlib version 3.4.3 [2024-07-19 16:48:09,495] multiqc [DEBUG ] No samples found: custom_content [2024-07-19 16:48:09,501] multiqc [DEBUG ] No samples found: ccs [2024-07-19 16:48:09,507] multiqc [DEBUG ] No samples found: ngsderive [2024-07-19 16:48:09,513] multiqc [DEBUG ] No samples found: purple [2024-07-19 16:48:09,517] multiqc [DEBUG ] No samples found: conpair [2024-07-19 16:48:09,522] multiqc [DEBUG ] No samples found: lima [2024-07-19 16:48:09,530] multiqc [DEBUG ] No samples found: peddy [2024-07-19 16:48:09,537] multiqc [DEBUG ] No samples found: somalier [2024-07-19 16:48:09,543] multiqc [DEBUG ] No samples found: methylQA [2024-07-19 16:48:09,552] multiqc.modules.mosdepth.mosdepth [DEBUG ] include_contigs: [] [2024-07-19 16:48:09,552] multiqc.modules.mosdepth.mosdepth [DEBUG ] exclude_contigs: [] [2024-07-19 16:48:09,552] multiqc [DEBUG ] No samples found: mosdepth [2024-07-19 16:48:09,559] multiqc [DEBUG ] No samples found: phantompeakqualtools [2024-07-19 16:48:09,564] multiqc [DEBUG ] No samples found: qualimap [2024-07-19 16:48:09,570] multiqc [DEBUG ] No samples found: preseq [2024-07-19 16:48:09,575] multiqc [DEBUG ] No samples found: quast [2024-07-19 16:48:09,579] multiqc [DEBUG ] No samples found: qorts [2024-07-19 16:48:09,586] multiqc [DEBUG ] No samples found: rna_seqc [2024-07-19 16:48:09,593] multiqc [DEBUG ] No samples found: rockhopper [2024-07-19 16:48:09,599] multiqc [DEBUG ] No samples found: rsem [2024-07-19 16:48:09,639] multiqc.modules.rseqc.rseqc [INFO ] Found 30 infer_experiment reports [2024-07-19 16:48:09,648] multiqc [DEBUG ] No samples found: busco [2024-07-19 16:48:09,654] multiqc [DEBUG ] No samples found: bustools [2024-07-19 16:48:09,659] multiqc [DEBUG ] No samples found: goleft_indexcov [2024-07-19 16:48:09,664] multiqc [DEBUG ] No samples found: gffcompare [2024-07-19 16:48:09,669] multiqc [DEBUG ] No samples found: disambiguate [2024-07-19 16:48:09,674] multiqc [DEBUG ] No samples found: supernova [2024-07-19 16:48:09,689] multiqc [DEBUG ] No samples found: deeptools [2024-07-19 16:48:09,695] multiqc [DEBUG ] No samples found: sargasso [2024-07-19 16:48:09,701] multiqc [DEBUG ] No samples found: verifybamid [2024-07-19 16:48:09,708] multiqc [DEBUG ] No samples found: mirtrace [2024-07-19 16:48:09,714] multiqc [DEBUG ] No samples found: happy [2024-07-19 16:48:09,719] multiqc [DEBUG ] No samples found: mirtop [2024-07-19 16:48:09,725] multiqc [DEBUG ] No samples found: sambamba [2024-07-19 16:48:09,731] multiqc [DEBUG ] No samples found: homer [2024-07-19 16:48:09,739] multiqc [DEBUG ] No samples found: hops [2024-07-19 16:48:09,745] multiqc [DEBUG ] No samples found: macs2 [2024-07-19 16:48:09,751] multiqc [DEBUG ] No samples found: theta2 [2024-07-19 16:48:09,756] multiqc [DEBUG ] No samples found: snpeff [2024-07-19 16:48:09,765] multiqc [DEBUG ] No samples found: gatk [2024-07-19 16:48:09,771] multiqc [DEBUG ] No samples found: htseq [2024-07-19 16:48:09,777] multiqc [DEBUG ] No samples found: bcftools [2024-07-19 16:48:09,784] multiqc.modules.featureCounts.feature_counts [DEBUG ] Duplicate sample name found! Overwriting: G227_M05_sorted [2024-07-19 16:48:09,786] multiqc.modules.featureCounts.feature_counts [DEBUG ] Duplicate sample name found! Overwriting: G227_M06_sorted [2024-07-19 16:48:09,789] multiqc.modules.featureCounts.feature_counts [DEBUG ] Duplicate sample name found! Overwriting: G227_M07_sorted [2024-07-19 16:48:09,791] multiqc.modules.featureCounts.feature_counts [DEBUG ] Duplicate sample name found! Overwriting: G227_M08_sorted [2024-07-19 16:48:09,793] multiqc.modules.featureCounts.feature_counts [DEBUG ] Duplicate sample name found! Overwriting: G227_M09_sorted [2024-07-19 16:48:09,794] multiqc.modules.featureCounts.feature_counts [DEBUG ] Duplicate sample name found! Overwriting: G227_M27_sorted [2024-07-19 16:48:09,796] multiqc.modules.featureCounts.feature_counts [DEBUG ] Duplicate sample name found! Overwriting: G227_M28_sorted [2024-07-19 16:48:09,798] multiqc.modules.featureCounts.feature_counts [DEBUG ] Duplicate sample name found! Overwriting: G227_M12_sorted [2024-07-19 16:48:09,799] multiqc.modules.featureCounts.feature_counts [DEBUG ] Duplicate sample name found! Overwriting: G227_M29_sorted [2024-07-19 16:48:09,801] multiqc.modules.featureCounts.feature_counts [DEBUG ] Duplicate sample name found! Overwriting: G227_M13_sorted [2024-07-19 16:48:09,803] multiqc.modules.featureCounts.feature_counts [DEBUG ] Duplicate sample name found! Overwriting: G227_M14_sorted [2024-07-19 16:48:09,804] multiqc.modules.featureCounts.feature_counts [DEBUG ] Duplicate sample name found! Overwriting: G227_M15_sorted [2024-07-19 16:48:09,806] multiqc.modules.featureCounts.feature_counts [DEBUG ] Duplicate sample name found! Overwriting: G227_M20_sorted [2024-07-19 16:48:09,808] multiqc.modules.featureCounts.feature_counts [DEBUG ] Duplicate sample name found! Overwriting: G227_M21_sorted [2024-07-19 16:48:09,811] multiqc.modules.featureCounts.feature_counts [DEBUG ] Duplicate sample name found! Overwriting: G227_M16_sorted [2024-07-19 16:48:09,812] multiqc.modules.featureCounts.feature_counts [DEBUG ] Duplicate sample name found! Overwriting: G227_M17_sorted [2024-07-19 16:48:09,814] multiqc.modules.featureCounts.feature_counts [DEBUG ] Duplicate sample name found! Overwriting: G227_M01_sorted [2024-07-19 16:48:09,816] multiqc.modules.featureCounts.feature_counts [DEBUG ] Duplicate sample name found! Overwriting: G227_M18_sorted [2024-07-19 16:48:09,818] multiqc.modules.featureCounts.feature_counts [DEBUG ] Duplicate sample name found! Overwriting: G227_M02_sorted [2024-07-19 16:48:09,820] multiqc.modules.featureCounts.feature_counts [DEBUG ] Duplicate sample name found! Overwriting: G227_M19_sorted [2024-07-19 16:48:09,821] multiqc.modules.featureCounts.feature_counts [DEBUG ] Duplicate sample name found! Overwriting: G227_M03_sorted [2024-07-19 16:48:09,823] multiqc.modules.featureCounts.feature_counts [DEBUG ] Duplicate sample name found! Overwriting: G227_M04_sorted [2024-07-19 16:48:09,824] multiqc.modules.featureCounts.feature_counts [DEBUG ] Duplicate sample name found! Overwriting: G227_M22_sorted [2024-07-19 16:48:09,826] multiqc.modules.featureCounts.feature_counts [DEBUG ] Duplicate sample name found! Overwriting: G227_M23_sorted [2024-07-19 16:48:09,828] multiqc.modules.featureCounts.feature_counts [DEBUG ] Duplicate sample name found! Overwriting: G227_M24_sorted [2024-07-19 16:48:09,830] multiqc.modules.featureCounts.feature_counts [DEBUG ] Duplicate sample name found! Overwriting: G227_M25_sorted [2024-07-19 16:48:09,831] multiqc.modules.featureCounts.feature_counts [DEBUG ] Duplicate sample name found! Overwriting: G227_M26_sorted [2024-07-19 16:48:09,832] multiqc.modules.featureCounts.feature_counts [DEBUG ] Duplicate sample name found! Overwriting: G227_M10_sorted [2024-07-19 16:48:09,833] multiqc.modules.featureCounts.feature_counts [DEBUG ] Duplicate sample name found! Overwriting: G227_M11_sorted [2024-07-19 16:48:09,834] multiqc.modules.featureCounts.feature_counts [DEBUG ] Duplicate sample name found! Overwriting: G227_M30_sorted [2024-07-19 16:48:09,834] multiqc.modules.featureCounts.feature_counts [INFO ] Found 30 reports [2024-07-19 16:48:09,848] multiqc [DEBUG ] No samples found: fgbio [2024-07-19 16:48:09,863] multiqc [DEBUG ] No samples found: dragen [2024-07-19 16:48:09,869] multiqc [DEBUG ] No samples found: dedup [2024-07-19 16:48:09,875] multiqc [DEBUG ] No samples found: damageprofiler [2024-07-19 16:48:09,908] multiqc [DEBUG ] No samples found: biobambam2 [2024-07-19 16:48:09,915] multiqc [DEBUG ] No samples found: jcvi [2024-07-19 16:48:09,921] multiqc [DEBUG ] No samples found: mtnucratio [2024-07-19 16:48:10,121] multiqc.modules.picard.picard [INFO ] Found 30 InsertSizeMetrics reports [2024-07-19 16:48:10,160] multiqc.modules.picard.picard [INFO ] Found 30 RnaSeqMetrics reports [2024-07-19 16:48:10,165] multiqc [DEBUG ] No samples found: vep [2024-07-19 16:48:10,177] multiqc [DEBUG ] No samples found: sentieon [2024-07-19 16:48:10,184] multiqc [DEBUG ] No samples found: prokka [2024-07-19 16:48:10,190] multiqc [DEBUG ] No samples found: qc3C [2024-07-19 16:48:10,196] multiqc [DEBUG ] No samples found: nanostat [2024-07-19 16:48:10,202] multiqc [DEBUG ] No samples found: samblaster [2024-07-19 16:48:10,269] multiqc.modules.samtools.samtools [INFO ] Found 90 flagstat reports [2024-07-19 16:48:10,274] multiqc [DEBUG ] No samples found: sexdeterrmine [2024-07-19 16:48:10,279] multiqc [DEBUG ] No samples found: eigenstratdatabasetools [2024-07-19 16:48:10,285] multiqc [DEBUG ] No samples found: bamtools [2024-07-19 16:48:10,290] multiqc [DEBUG ] No samples found: jellyfish [2024-07-19 16:48:10,299] multiqc [DEBUG ] No samples found: vcftools [2024-07-19 16:48:10,306] multiqc [DEBUG ] No samples found: longranger [2024-07-19 16:48:10,311] multiqc [DEBUG ] No samples found: stacks [2024-07-19 16:48:10,317] multiqc [DEBUG ] No samples found: varscan2 [2024-07-19 16:48:10,323] multiqc [DEBUG ] No samples found: snippy [2024-07-19 16:48:10,342] multiqc [DEBUG ] No samples found: bbmap [2024-07-19 16:48:10,349] multiqc [DEBUG ] No samples found: bismark [2024-07-19 16:48:10,356] multiqc [DEBUG ] No samples found: biscuit [2024-07-19 16:48:10,362] multiqc [DEBUG ] No samples found: hicexplorer [2024-07-19 16:48:10,367] multiqc [DEBUG ] No samples found: hicup [2024-07-19 16:48:10,375] multiqc [DEBUG ] No samples found: hicpro [2024-07-19 16:48:10,380] multiqc [DEBUG ] No samples found: salmon [2024-07-19 16:48:10,385] multiqc [DEBUG ] No samples found: kallisto [2024-07-19 16:48:10,390] multiqc [DEBUG ] No samples found: slamdunk [2024-07-19 16:48:10,419] multiqc.modules.star.star [INFO ] Found 30 reports [2024-07-19 16:48:10,428] multiqc [DEBUG ] No samples found: hisat2 [2024-07-19 16:48:10,434] multiqc [DEBUG ] No samples found: tophat [2024-07-19 16:48:10,440] multiqc [DEBUG ] No samples found: bowtie2 [2024-07-19 16:48:10,444] multiqc [DEBUG ] No samples found: bowtie1 [2024-07-19 16:48:10,449] multiqc [DEBUG ] No samples found: snpsplit [2024-07-19 16:48:10,456] multiqc [DEBUG ] No samples found: odgi [2024-07-19 16:48:10,462] multiqc [DEBUG ] No samples found: pangolin [2024-07-19 16:48:10,467] multiqc [DEBUG ] No samples found: kat [2024-07-19 16:48:10,473] multiqc [DEBUG ] No samples found: leehom [2024-07-19 16:48:10,479] multiqc [DEBUG ] No samples found: adapterRemoval [2024-07-19 16:48:10,484] multiqc [DEBUG ] No samples found: clipandmerge [2024-07-19 16:48:10,493] multiqc [DEBUG ] No samples found: cutadapt [2024-07-19 16:48:10,501] multiqc [DEBUG ] No samples found: flexbar [2024-07-19 16:48:10,507] multiqc [DEBUG ] No samples found: kaiju [2024-07-19 16:48:10,512] multiqc [DEBUG ] No samples found: kraken [2024-07-19 16:48:10,517] multiqc [DEBUG ] No samples found: malt [2024-07-19 16:48:10,522] multiqc [DEBUG ] No samples found: trimmomatic [2024-07-19 16:48:10,527] multiqc [DEBUG ] No samples found: sickle [2024-07-19 16:48:10,533] multiqc [DEBUG ] No samples found: skewer [2024-07-19 16:48:10,538] multiqc [DEBUG ] No samples found: sortmerna [2024-07-19 16:48:10,546] multiqc [DEBUG ] No samples found: biobloomtools [2024-07-19 16:48:10,553] multiqc [DEBUG ] No samples found: fastq_screen [2024-07-19 16:48:10,559] multiqc [DEBUG ] No samples found: afterqc [2024-07-19 16:48:10,569] multiqc.modules.fastp.fastp [DEBUG ] No duplication rate plot data: fastp.json [2024-07-19 16:48:10,571] multiqc.modules.fastp.fastp [DEBUG ] No duplication rate plot data: fastp.json [2024-07-19 16:48:10,574] multiqc.modules.fastp.fastp [DEBUG ] No duplication rate plot data: fastp.json [2024-07-19 16:48:10,577] multiqc.modules.fastp.fastp [DEBUG ] No duplication rate plot data: fastp.json [2024-07-19 16:48:10,580] multiqc.modules.fastp.fastp [DEBUG ] No duplication rate plot data: fastp.json [2024-07-19 16:48:10,583] multiqc.modules.fastp.fastp [DEBUG ] No duplication rate plot data: fastp.json [2024-07-19 16:48:10,587] multiqc.modules.fastp.fastp [DEBUG ] No duplication rate plot data: fastp.json [2024-07-19 16:48:10,589] multiqc.modules.fastp.fastp [DEBUG ] No duplication rate plot data: fastp.json [2024-07-19 16:48:10,592] multiqc.modules.fastp.fastp [DEBUG ] No duplication rate plot data: fastp.json [2024-07-19 16:48:10,595] multiqc.modules.fastp.fastp [DEBUG ] No duplication rate plot data: fastp.json [2024-07-19 16:48:10,598] multiqc.modules.fastp.fastp [DEBUG ] No duplication rate plot data: fastp.json [2024-07-19 16:48:10,600] multiqc.modules.fastp.fastp [DEBUG ] No duplication rate plot data: fastp.json [2024-07-19 16:48:10,603] multiqc.modules.fastp.fastp [DEBUG ] No duplication rate plot data: fastp.json [2024-07-19 16:48:10,607] multiqc.modules.fastp.fastp [DEBUG ] No duplication rate plot data: fastp.json [2024-07-19 16:48:10,610] multiqc.modules.fastp.fastp [DEBUG ] No duplication rate plot data: fastp.json [2024-07-19 16:48:10,614] multiqc.modules.fastp.fastp [DEBUG ] No duplication rate plot data: fastp.json [2024-07-19 16:48:10,618] multiqc.modules.fastp.fastp [DEBUG ] No duplication rate plot data: fastp.json [2024-07-19 16:48:10,622] multiqc.modules.fastp.fastp [DEBUG ] No duplication rate plot data: fastp.json [2024-07-19 16:48:10,625] multiqc.modules.fastp.fastp [DEBUG ] No duplication rate plot data: fastp.json [2024-07-19 16:48:10,629] multiqc.modules.fastp.fastp [DEBUG ] No duplication rate plot data: fastp.json [2024-07-19 16:48:10,632] multiqc.modules.fastp.fastp [DEBUG ] No duplication rate plot data: fastp.json [2024-07-19 16:48:10,635] multiqc.modules.fastp.fastp [DEBUG ] No duplication rate plot data: fastp.json [2024-07-19 16:48:10,638] multiqc.modules.fastp.fastp [DEBUG ] No duplication rate plot data: fastp.json [2024-07-19 16:48:10,641] multiqc.modules.fastp.fastp [DEBUG ] No duplication rate plot data: fastp.json [2024-07-19 16:48:10,644] multiqc.modules.fastp.fastp [DEBUG ] No duplication rate plot data: fastp.json [2024-07-19 16:48:10,647] multiqc.modules.fastp.fastp [DEBUG ] No duplication rate plot data: fastp.json [2024-07-19 16:48:10,650] multiqc.modules.fastp.fastp [DEBUG ] No duplication rate plot data: fastp.json [2024-07-19 16:48:10,652] multiqc.modules.fastp.fastp [DEBUG ] No duplication rate plot data: fastp.json [2024-07-19 16:48:10,655] multiqc.modules.fastp.fastp [DEBUG ] No duplication rate plot data: fastp.json [2024-07-19 16:48:10,658] multiqc.modules.fastp.fastp [DEBUG ] No duplication rate plot data: fastp.json [2024-07-19 16:48:10,659] multiqc.modules.fastp.fastp [INFO ] Found 30 reports [2024-07-19 16:48:12,987] multiqc.modules.fastqc.fastqc [INFO ] Found 60 reports [2024-07-19 16:48:13,863] multiqc [DEBUG ] No samples found: pychopper [2024-07-19 16:48:13,868] multiqc [DEBUG ] No samples found: pycoqc [2024-07-19 16:48:13,875] multiqc [DEBUG ] No samples found: minionqc [2024-07-19 16:48:13,881] multiqc [DEBUG ] No samples found: multivcfanalyzer [2024-07-19 16:48:13,886] multiqc [DEBUG ] No samples found: clusterflow [2024-07-19 16:48:13,891] multiqc [DEBUG ] No samples found: bcl2fastq [2024-07-19 16:48:13,896] multiqc [DEBUG ] No samples found: bclconvert [2024-07-19 16:48:13,901] multiqc [DEBUG ] No samples found: interop [2024-07-19 16:48:13,906] multiqc [DEBUG ] No samples found: ivar [2024-07-19 16:48:13,910] multiqc [DEBUG ] No samples found: flash [2024-07-19 16:48:13,914] multiqc [DEBUG ] No samples found: seqyclean [2024-07-19 16:48:13,918] multiqc [DEBUG ] No samples found: optitype [2024-07-19 16:48:14,055] multiqc [INFO ] Compressing plot data [2024-07-19 16:48:17,363] multiqc [INFO ] Report : multiqc_report.html [2024-07-19 16:48:17,363] multiqc [INFO ] Data : multiqc_data [2024-07-19 16:48:17,363] multiqc [DEBUG ] Moving data file from '/scratch/tmp6y325es2/multiqc_data' to '/projectnb/wax-dk/max/G227/Scripts/14_final_summary/G227_RELAXPARAMS_multiqc_report/multiqc_data' [2024-07-19 16:48:17,521] multiqc [INFO ] MultiQC complete