Sample fastp_mqc-generalstats-fastp-pct_duplication fastp_mqc-generalstats-fastp-after_filtering_q30_rate fastp_mqc-generalstats-fastp-after_filtering_q30_bases fastp_mqc-generalstats-fastp-after_filtering_gc_content fastp_mqc-generalstats-fastp-pct_surviving fastp_mqc-generalstats-fastp-pct_adapter FastQC_mqc-generalstats-fastqc-percent_duplicates FastQC_mqc-generalstats-fastqc-percent_gc FastQC_mqc-generalstats-fastqc-avg_sequence_length FastQC_mqc-generalstats-fastqc-percent_fails FastQC_mqc-generalstats-fastqc-total_sequences STAR_mqc-generalstats-star-uniquely_mapped_percent STAR_mqc-generalstats-star-uniquely_mapped Picard_mqc-generalstats-picard-PCT_RIBOSOMAL_BASES Picard_mqc-generalstats-picard-PCT_MRNA_BASES Picard_mqc-generalstats-picard-summed_median Picard_mqc-generalstats-picard-summed_mean featureCounts_mqc-generalstats-featurecounts-percent_assigned featureCounts_mqc-generalstats-featurecounts-Assigned Samtools_mqc-generalstats-samtools-flagstat_total Samtools_mqc-generalstats-samtools-mapped_passed G227_M01_CKDL240023967-1A_22NF25LT3_L5_1 15.5642 0.944795 5035994006.0 0.530978 98.53101992903854 73.80003879522744 55.26628718818326 54.0 150.0 27.27272727272727 25503137.0 G227_M01_CKDL240023967-1A_22NF25LT3_L5_2 54.1097221242571 53.0 150.0 36.36363636363637 25503137.0 G227_M01_G227_M01 60.78 15501644.0 G227_M01_primary_unique 26.3427 16.098100000000002 93 112.577068 G227_M01_sorted 36.21495887790998 5613914 G227_M01_statistics_for_all_accepted_reads 63282746 63282746 G227_M01_statistics_for_primary_reads 39731081 39731081 G227_M01_statistics_for_primary_unique_reads 29786447 29786447 G227_M02_CKDL240023967-1A_22NF25LT3_L5_1 36.4174 0.961871 4952868186.0 0.534519 98.79988746527374 32.88168450378359 62.58708705342558 53.0 150.0 18.181818181818183 18742659.0 G227_M02_CKDL240023967-1A_22NF25LT3_L5_2 61.32990873249428 53.0 150.0 36.36363636363637 18742659.0 G227_M02_G227_M02 82.15 15397038.0 G227_M02_primary_unique 39.3953 14.3327 172 184.41136599999996 G227_M02_sorted 59.9033658291939 9223344 G227_M02_statistics_for_all_accepted_reads 40395912 40395912 G227_M02_statistics_for_primary_reads 33845387 33845387 G227_M02_statistics_for_primary_unique_reads 29904952 29904952 G227_M03_CKDL240023967-1A_22NF25LT3_L5_1 31.643300000000004 0.957077 6342211308.0 0.550294 98.6863973366092 59.356404745523264 69.80777836295651 55.0 150.0 18.181818181818183 27237460.0 G227_M03_CKDL240023967-1A_22NF25LT3_L5_2 69.03354619887753 54.0 150.0 36.36363636363637 27237460.0 G227_M03_G227_M03 71.92 19590293.0 G227_M03_primary_unique 47.4113 14.5726 126 143.610261 G227_M03_sorted 50.98593471777069 9988294 G227_M03_statistics_for_all_accepted_reads 62081591 62081591 G227_M03_statistics_for_primary_reads 46179672 46179672 G227_M03_statistics_for_primary_unique_reads 37829068 37829068 G227_M04_CKDL240023967-1A_22NF25LT3_L5_1 18.1935 0.951683 5238872227.0 0.538853 98.33124874614889 70.49219273561161 57.7534017319291 54.0 150.0 27.27272727272727 25735711.0 G227_M04_CKDL240023967-1A_22NF25LT3_L5_2 57.02170785504045 54.0 150.0 36.36363636363637 25735711.0 G227_M04_G227_M04 67.92 17480441.0 G227_M04_primary_unique 35.4261 13.125200000000001 101 126.002399 G227_M04_sorted 47.7780165843642 8351808 G227_M04_statistics_for_all_accepted_reads 64340966 64340966 G227_M04_statistics_for_primary_reads 43222839 43222839 G227_M04_statistics_for_primary_unique_reads 33465877 33465877 G227_M05_CKDL240023967-1A_22NF25LT3_L5_1 15.822700000000001 0.957023 4947689379.0 0.520758 98.34825180900847 78.00677429550683 57.29066922590037 54.0 150.0 36.36363636363637 24700133.0 G227_M05_CKDL240023967-1A_22NF25LT3_L5_2 56.38359215520061 52.0 150.0 27.27272727272727 24700133.0 G227_M05_G227_M05 62.75 15498549.0 G227_M05_primary_unique 31.328699999999998 12.7949 92 107.935797 G227_M05_sorted 42.34300256107846 6562551 G227_M05_statistics_for_all_accepted_reads 56938830 56938830 G227_M05_statistics_for_primary_reads 38296434 38296434 G227_M05_statistics_for_primary_unique_reads 29689927 29689927 G227_M06_CKDL240023967-1A_22NF25LT3_L5_1 29.646 0.953713 5863616392.0 0.586007 98.53572377764002 68.26098142965677 71.61643397364058 57.0 150.0 27.27272727272727 26868701.0 G227_M06_CKDL240023967-1A_22NF25LT3_L5_2 70.9545051092983 57.0 150.0 45.45454545454545 26868701.0 G227_M06_G227_M06 72.02 19350411.0 G227_M06_primary_unique 46.1949 19.0112 104 118.156489 G227_M06_sorted 45.816892468072126 8865757 G227_M06_statistics_for_all_accepted_reads 64841062 64841062 G227_M06_statistics_for_primary_reads 46443220 46443220 G227_M06_statistics_for_primary_unique_reads 37349217 37349217 G227_M07_CKDL240023967-1A_22NF25LT3_L5_1 25.621899999999997 0.958969 5422877645.0 0.51016 98.66926032797481 58.736679859222384 59.629934524768004 51.0 150.0 27.27272727272727 23069576.0 G227_M07_CKDL240023967-1A_22NF25LT3_L5_2 58.702459949774976 51.0 150.0 36.36363636363637 23069576.0 G227_M07_G227_M07 66.58 15360627.0 G227_M07_primary_unique 35.8885 11.9743 129 147.778881 G227_M07_sorted 49.470415498013196 7598966 G227_M07_statistics_for_all_accepted_reads 50032833 50032833 G227_M07_statistics_for_primary_reads 36382633 36382633 G227_M07_statistics_for_primary_unique_reads 29631175 29631175 G227_M08_CKDL240023967-1A_22NF25LT3_L5_1 29.5252 0.959909 5132257264.0 0.510297 98.67008131535509 53.911476852284565 67.54379973401956 51.0 150.0 27.27272727272727 21323033.0 G227_M08_CKDL240023967-1A_22NF25LT3_L5_2 66.05381497786843 51.0 150.0 36.36363636363637 21323033.0 G227_M08_G227_M08 64.44 13741409.0 G227_M08_primary_unique 40.997699999999995 12.9421 145 162.486214 G227_M08_sorted 50.539700841449374 6944867 G227_M08_statistics_for_all_accepted_reads 44675113 44675113 G227_M08_statistics_for_primary_reads 32507892 32507892 G227_M08_statistics_for_primary_unique_reads 26562650 26562650 G227_M09_CKDL240023967-1A_22NF25LT3_L5_1 40.5533 0.953999 5345589368.0 0.594663 98.35361853671363 34.96202836471426 73.96010967346601 58.0 150.0 27.27272727272727 20605249.0 G227_M09_CKDL240023967-1A_22NF25LT3_L5_2 73.29681724991892 59.0 150.0 27.27272727272727 20605249.0 G227_M09_G227_M09 81.85 16865248.0 G227_M09_primary_unique 45.465 20.6179 152 158.425811 G227_M09_sorted 45.54023160525122 7680473 G227_M09_statistics_for_all_accepted_reads 44760532 44760532 G227_M09_statistics_for_primary_reads 37115018 37115018 G227_M09_statistics_for_primary_unique_reads 32404681 32404681 G227_M10_CKDL240023967-1A_22NF25LT3_L5_1 27.241 0.952145 4907733930.0 0.557753 98.21014449270059 58.13761703556655 61.982055683557846 56.0 150.0 18.181818181818183 21130756.0 G227_M10_CKDL240023967-1A_22NF25LT3_L5_2 61.46874772337225 55.0 150.0 18.181818181818183 21130756.0 G227_M10_G227_M10 73.93 15620961.0 G227_M10_primary_unique 39.1539 15.9193 121 137.653779 G227_M10_sorted 44.414495369395006 6937971 G227_M10_statistics_for_all_accepted_reads 47466051 47466051 G227_M10_statistics_for_primary_reads 35981778 35981778 G227_M10_statistics_for_primary_unique_reads 29990149 29990149 G227_M11_CKDL240023967-1A_22NF25LT3_L5_1 27.721899999999998 0.930826 4158957278.0 0.594888 98.38538391369681 53.58314944357239 62.499680919662495 58.0 150.0 45.45454545454545 18493870.0 G227_M11_CKDL240023967-1A_22NF25LT3_L5_2 61.56962987296893 59.0 150.0 45.45454545454545 18493870.0 G227_M11_G227_M11 67.92 12561528.0 G227_M11_primary_unique 32.8515 17.811799999999998 125 143.303111 G227_M11_sorted 51.27287858610832 6440657 G227_M11_statistics_for_all_accepted_reads 48403143 48403143 G227_M11_statistics_for_primary_reads 31546418 31546418 G227_M11_statistics_for_primary_unique_reads 24139051 24139051 G227_M12_CKDL240023967-1A_22NF25LT3_L5_1 36.2767 0.960538 5175191290.0 0.575795 98.76910818656638 52.800858201584624 68.35615716444174 57.0 150.0 27.27272727272727 21024431.0 G227_M12_CKDL240023967-1A_22NF25LT3_L5_2 67.82137633303111 57.0 150.0 36.36363636363637 21024431.0 G227_M12_G227_M12 80.79 16985862.0 G227_M12_primary_unique 41.0535 18.3058 133 143.513798 G227_M12_sorted 54.83596299086852 9314361 G227_M12_statistics_for_all_accepted_reads 47748724 47748724 G227_M12_statistics_for_primary_reads 38467674 38467674 G227_M12_statistics_for_primary_unique_reads 32865221 32865221 G227_M13_CKDL240023967-1A_22NF25LT3_L5_1 17.4257 0.954935 5155453664.0 0.527749 98.47386492004814 70.44604469236181 47.955158326253354 54.0 150.0 18.181818181818183 24689230.0 G227_M13_CKDL240023967-1A_22NF25LT3_L5_2 47.50634752700432 53.0 150.0 18.181818181818183 24689230.0 G227_M13_G227_M13 72.16 17814888.0 G227_M13_primary_unique 22.794 15.732199999999999 105 126.916582 G227_M13_sorted 46.71855360527666 8322858 G227_M13_statistics_for_all_accepted_reads 58669939 58669939 G227_M13_statistics_for_primary_reads 42221208 42221208 G227_M13_statistics_for_primary_unique_reads 34261348 34261348 G227_M14_CKDL240023967-1A_22NF25LT3_L5_1 26.433400000000002 0.953062 4866611826.0 0.548522 98.09500484272002 54.09051354664669 55.248971103786246 54.0 150.0 18.181818181818183 19970182.0 G227_M14_CKDL240023967-1A_22NF25LT3_L5_2 55.04381890595487 54.0 150.0 36.36363636363637 19970182.0 G227_M14_G227_M14 76.78 15334090.0 G227_M14_primary_unique 30.786799999999996 13.998099999999999 132 146.30001 G227_M14_sorted 44.66823919776133 6849468 G227_M14_statistics_for_all_accepted_reads 43887978 43887978 G227_M14_statistics_for_primary_reads 34714405 34714405 G227_M14_statistics_for_primary_unique_reads 29426152 29426152 G227_M15_CKDL240023967-1A_22NF25LT3_L5_1 18.212400000000002 0.958483 6183786920.0 0.511436 98.36700001025109 65.12896820383574 50.09825954548171 51.0 150.0 18.181818181818183 27704348.0 G227_M15_CKDL240023967-1A_22NF25LT3_L5_2 48.63850692914734 51.0 150.0 9.090909090909092 27704348.0 G227_M15_G227_M15 71.23 19733718.0 G227_M15_primary_unique 25.2353 13.7356 121 142.306317 G227_M15_sorted 49.673771561953004 9802482 G227_M15_statistics_for_all_accepted_reads 61508798 61508798 G227_M15_statistics_for_primary_reads 45823433 45823433 G227_M15_statistics_for_primary_unique_reads 37826325 37826325 G227_M16_CKDL240023967-1A_22NF25LT3_L5_1 35.525400000000005 0.954604 4857690615.0 0.576349 98.39970721814258 47.80098233631224 64.76726292502121 57.0 150.0 27.27272727272727 19405574.0 G227_M16_CKDL240023967-1A_22NF25LT3_L5_2 65.0991716555936 57.0 150.0 36.36363636363637 19405574.0 G227_M16_G227_M16 81.84 15881382.0 G227_M16_primary_unique 34.6192 22.4042 138 147.559059 G227_M16_sorted 51.43988728436858 8169365 G227_M16_statistics_for_all_accepted_reads 43019972 43019972 G227_M16_statistics_for_primary_reads 35332550 35332550 G227_M16_statistics_for_primary_unique_reads 30638066 30638066 G227_M17_CKDL240023967-1A_22NF25LT3_L5_1 20.150299999999998 0.947851 6254973273.0 0.524337 98.29163784161621 63.88076909582752 50.70797151181644 53.0 150.0 18.181818181818183 27789775.0 G227_M17_CKDL240023967-1A_22NF25LT3_L5_2 50.33334077827901 53.0 150.0 45.45454545454545 27789775.0 G227_M17_G227_M17 69.02 19179989.0 G227_M17_primary_unique 22.3489 15.0585 119 135.231165 G227_M17_sorted 42.46548837958145 8144876 G227_M17_statistics_for_all_accepted_reads 63822417 63822417 G227_M17_statistics_for_primary_reads 45467570 45467570 G227_M17_statistics_for_primary_unique_reads 36874565 36874565 G227_M18_CKDL240023967-1A_22NF25LT3_L5_1 24.5689 0.951874 5819188362.0 0.502918 98.2105385609943 49.613115703709695 51.4656741529027 50.0 150.0 18.181818181818183 23906243.0 G227_M18_CKDL240023967-1A_22NF25LT3_L5_2 51.46326455230257 50.0 150.0 36.36363636363637 23906243.0 G227_M18_G227_M18 71.04 16983480.0 G227_M18_primary_unique 27.638 11.0113 143 159.467401 G227_M18_sorted 42.106588284615405 7151164 G227_M18_statistics_for_all_accepted_reads 50305843 50305843 G227_M18_statistics_for_primary_reads 38822063 38822063 G227_M18_statistics_for_primary_unique_reads 32767945 32767945 G227_M19_CKDL240023967-1A_22NF25LT3_L5_1 23.1189 0.95669 6464972611.0 0.54325 98.38972181905416 64.74359491923394 56.44560489266803 54.0 150.0 27.27272727272727 29229608.0 G227_M19_CKDL240023967-1A_22NF25LT3_L5_2 55.46733840774724 54.0 150.0 27.27272727272727 29229608.0 G227_M19_G227_M19 73.91 21604805.0 G227_M19_primary_unique 31.0898 15.840599999999998 115 133.578078 G227_M19_sorted 47.11452382930557 10179001 G227_M19_statistics_for_all_accepted_reads 66500636 66500636 G227_M19_statistics_for_primary_reads 50218280 50218280 G227_M19_statistics_for_primary_unique_reads 41465662 41465662 G227_M20_CKDL240023967-1A_22NF25LT3_L5_1 16.426 0.956078 5733887250.0 0.492612 98.37040314766587 56.427094229211626 41.397391468577105 50.0 150.0 9.090909090909092 24655730.0 G227_M20_CKDL240023967-1A_22NF25LT3_L5_2 40.42275411575831 50.0 150.0 9.090909090909092 24655730.0 G227_M20_G227_M20 71.73 17685811.0 G227_M20_primary_unique 17.0136 9.7035 140 157.275584 G227_M20_sorted 45.78331748541246 8097151 G227_M20_statistics_for_all_accepted_reads 53572759 53572759 G227_M20_statistics_for_primary_reads 40549326 40549326 G227_M20_statistics_for_primary_unique_reads 34029860 34029860 G227_M21_CKDL240023967-1A_22NF25LT3_L5_1 20.000799999999998 0.947065 5937953706.0 0.50874 98.41301710875878 63.5456180097987 50.86031408619206 52.0 150.0 36.36363636363637 26183080.0 G227_M21_CKDL240023967-1A_22NF25LT3_L5_2 49.88985207079843 51.0 150.0 18.181818181818183 26183080.0 G227_M21_G227_M21 66.92 17522611.0 G227_M21_primary_unique 24.7026 12.6416 125 143.759294 G227_M21_sorted 44.21330816509024 7747326 G227_M21_statistics_for_all_accepted_reads 60125185 60125185 G227_M21_statistics_for_primary_reads 42027681 42027681 G227_M21_statistics_for_primary_unique_reads 33748980 33748980 G227_M22_CKDL240023967-1A_22NF25LT3_L5_1 18.116 0.949696 5484237310.0 0.508187 98.54977617070041 60.74267649299626 46.815107952762936 52.0 150.0 18.181818181818183 24648471.0 G227_M22_CKDL240023967-1A_22NF25LT3_L5_2 45.50286460274051 51.0 150.0 27.27272727272727 24648471.0 G227_M22_G227_M22 70.64 17412000.0 G227_M22_primary_unique 21.3154 13.2611 131 152.000415 G227_M22_sorted 52.28039857569492 9103063 G227_M22_statistics_for_all_accepted_reads 58031573 58031573 G227_M22_statistics_for_primary_reads 41287812 41287812 G227_M22_statistics_for_primary_unique_reads 33587783 33587783 G227_M23_CKDL240023967-1A_22NF25LT3_L5_1 19.334799999999998 0.941009 5619858953.0 0.551473 98.28476413345312 72.681234468139 57.89792698805317 55.0 150.0 27.27272727272727 28336511.0 G227_M23_CKDL240023967-1A_22NF25LT3_L5_2 57.41686010879079 55.0 150.0 36.36363636363637 28336511.0 G227_M23_G227_M23 64.99 18414621.0 G227_M23_primary_unique 33.6347 14.7502 95 111.885838 G227_M23_sorted 37.146889963143956 6840459 G227_M23_statistics_for_all_accepted_reads 71864017 71864017 G227_M23_statistics_for_primary_reads 46558215 46558215 G227_M23_statistics_for_primary_unique_reads 35321562 35321562 G227_M24_CKDL240023967-1A_22NF25LT3_L5_1 6.0378 0.946065 5115090560.0 0.472203 98.36394096305095 82.81812538379648 41.339406547959534 53.0 150.0 27.27272727272727 29833520.0 G227_M24_CKDL240023967-1A_22NF25LT3_L5_2 40.060036003177444 50.0 150.0 36.36363636363637 29833520.0 G227_M24_G227_M24 56.16 16754614.0 G227_M24_primary_unique 8.2288 5.8276 79 102.259855 G227_M24_sorted 36.992735254897546 6197990 G227_M24_statistics_for_all_accepted_reads 73479486 73479486 G227_M24_statistics_for_primary_reads 43921397 43921397 G227_M24_statistics_for_primary_unique_reads 32030654 32030654 G227_M25_CKDL240023967-1A_22NF25LT3_L5_1 10.8832 0.945739 6147983452.0 0.436232 98.04216281771345 50.41382798646493 41.15761100691453 44.0 150.0 27.27272727272727 26227564.0 G227_M25_CKDL240023967-1A_22NF25LT3_L5_2 41.004207197544616 45.0 150.0 27.27272727272727 26227564.0 G227_M25_G227_M25 58.54 15353616.0 G227_M25_primary_unique 4.2578 3.8047999999999997 149 176.070503 G227_M25_sorted 34.71032491629333 5329290 G227_M25_statistics_for_all_accepted_reads 50638109 50638109 G227_M25_statistics_for_primary_reads 35863533 35863533 G227_M25_statistics_for_primary_unique_reads 29527591 29527591 G227_M26_CKDL240023967-1A_22NF25LT3_L5_1 10.7274 0.938527 4441060649.0 0.484182 97.45064487777088 73.58451619333445 48.036192797082236 51.0 150.0 27.27272727272727 22313996.0 G227_M26_CKDL240023967-1A_22NF25LT3_L5_2 49.632035563859446 49.0 150.0 27.27272727272727 22313996.0 G227_M26_G227_M26 60.52 13504118.0 G227_M26_primary_unique 20.2068 7.0813 96 117.699848 G227_M26_sorted 32.6671316112611 4411408 G227_M26_statistics_for_all_accepted_reads 50957164 50957164 G227_M26_statistics_for_primary_reads 33409257 33409257 G227_M26_statistics_for_primary_unique_reads 25843246 25843246 G227_M27_CKDL240023967-1A_22NF25LT3_L5_1 18.0499 0.948811 5591528587.0 0.508062 98.40501983600399 61.783250866675424 44.68795371013214 52.0 150.0 18.181818181818183 24951094.0 G227_M27_CKDL240023967-1A_22NF25LT3_L5_2 43.867284104599115 51.0 150.0 18.181818181818183 24951094.0 G227_M27_G227_M27 71.19 17762853.0 G227_M27_primary_unique 22.5229 11.404200000000001 127 147.740334 G227_M27_sorted 44.90633908865879 7976647 G227_M27_statistics_for_all_accepted_reads 58941004 58941004 G227_M27_statistics_for_primary_reads 42098031 42098031 G227_M27_statistics_for_primary_unique_reads 34235228 34235228 G227_M28_CKDL240023967-1A_22NF25LT3_L5_1 6.53605 0.944565 4929174380.0 0.48221 97.9549212667554 79.02712964598196 36.48182019196581 52.0 150.0 18.181818181818183 27507694.0 G227_M28_CKDL240023967-1A_22NF25LT3_L5_2 36.66705622423025 50.0 150.0 18.181818181818183 27507694.0 G227_M28_G227_M28 64.0 17604980.0 G227_M28_primary_unique 9.105599999999999 6.820600000000001 86 112.96275 G227_M28_sorted 40.17944354381544 7073583 G227_M28_statistics_for_all_accepted_reads 67934420 67934420 G227_M28_statistics_for_primary_reads 43862989 43862989 G227_M28_statistics_for_primary_unique_reads 33700962 33700962 G227_M29_CKDL240023967-1A_22NF25LT3_L5_1 16.8225 0.957835 5896895401.0 0.472968 98.44026002449444 51.52679964539043 39.03174535238752 48.0 150.0 9.090909090909092 24275713.0 G227_M29_CKDL240023967-1A_22NF25LT3_L5_2 37.912503215809934 48.0 150.0 18.181818181818183 24275713.0 G227_M29_G227_M29 73.6 17865942.0 G227_M29_primary_unique 13.1993 10.352699999999999 153 168.947184 G227_M29_sorted 53.41456946406744 9543016 G227_M29_statistics_for_all_accepted_reads 52532762 52532762 G227_M29_statistics_for_primary_reads 40444536 40444536 G227_M29_statistics_for_primary_unique_reads 34576090 34576090 G227_M30_CKDL240023967-1A_22NF25LT3_L5_1 4.80784 0.946649 4691475375.0 0.443348 98.23627117834164 87.45489287350777 47.19979347717357 52.0 150.0 27.27272727272727 28126376.0 G227_M30_CKDL240023967-1A_22NF25LT3_L5_2 46.02658941368465 48.0 150.0 27.27272727272727 28126376.0 G227_M30_G227_M30 47.96 13489595.0 G227_M30_primary_unique 2.375 2.1433 76 93.585721 G227_M30_sorted 30.04069432773927 4052368 G227_M30_statistics_for_all_accepted_reads 67157836 67157836 G227_M30_statistics_for_primary_reads 37143710 37143710 G227_M30_statistics_for_primary_unique_reads 25872312 25872312