Module Section Sample Name Source RSeQC infer_experiment G227_M05_Read_Strandness /projectnb/wax-dk/max/G227/SAMPLES/G227_M05/Read_Strandness/G227_M05_Read_Strandness.txt RSeQC infer_experiment G227_M06_Read_Strandness /projectnb/wax-dk/max/G227/SAMPLES/G227_M06/Read_Strandness/G227_M06_Read_Strandness.txt RSeQC infer_experiment G227_M07_Read_Strandness /projectnb/wax-dk/max/G227/SAMPLES/G227_M07/Read_Strandness/G227_M07_Read_Strandness.txt RSeQC infer_experiment G227_M08_Read_Strandness /projectnb/wax-dk/max/G227/SAMPLES/G227_M08/Read_Strandness/G227_M08_Read_Strandness.txt RSeQC infer_experiment G227_M09_Read_Strandness /projectnb/wax-dk/max/G227/SAMPLES/G227_M09/Read_Strandness/G227_M09_Read_Strandness.txt RSeQC infer_experiment G227_M27_Read_Strandness /projectnb/wax-dk/max/G227/SAMPLES/G227_M27/Read_Strandness/G227_M27_Read_Strandness.txt RSeQC infer_experiment G227_M28_Read_Strandness /projectnb/wax-dk/max/G227/SAMPLES/G227_M28/Read_Strandness/G227_M28_Read_Strandness.txt RSeQC infer_experiment G227_M12_Read_Strandness /projectnb/wax-dk/max/G227/SAMPLES/G227_M12/Read_Strandness/G227_M12_Read_Strandness.txt RSeQC infer_experiment G227_M29_Read_Strandness /projectnb/wax-dk/max/G227/SAMPLES/G227_M29/Read_Strandness/G227_M29_Read_Strandness.txt RSeQC infer_experiment G227_M13_Read_Strandness /projectnb/wax-dk/max/G227/SAMPLES/G227_M13/Read_Strandness/G227_M13_Read_Strandness.txt RSeQC infer_experiment G227_M14_Read_Strandness /projectnb/wax-dk/max/G227/SAMPLES/G227_M14/Read_Strandness/G227_M14_Read_Strandness.txt RSeQC infer_experiment G227_M15_Read_Strandness /projectnb/wax-dk/max/G227/SAMPLES/G227_M15/Read_Strandness/G227_M15_Read_Strandness.txt RSeQC infer_experiment G227_M20_Read_Strandness /projectnb/wax-dk/max/G227/SAMPLES/G227_M20/Read_Strandness/G227_M20_Read_Strandness.txt RSeQC infer_experiment G227_M21_Read_Strandness /projectnb/wax-dk/max/G227/SAMPLES/G227_M21/Read_Strandness/G227_M21_Read_Strandness.txt RSeQC infer_experiment G227_M16_Read_Strandness /projectnb/wax-dk/max/G227/SAMPLES/G227_M16/Read_Strandness/G227_M16_Read_Strandness.txt RSeQC infer_experiment G227_M17_Read_Strandness /projectnb/wax-dk/max/G227/SAMPLES/G227_M17/Read_Strandness/G227_M17_Read_Strandness.txt RSeQC infer_experiment G227_M01_Read_Strandness /projectnb/wax-dk/max/G227/SAMPLES/G227_M01/Read_Strandness/G227_M01_Read_Strandness.txt RSeQC infer_experiment G227_M18_Read_Strandness /projectnb/wax-dk/max/G227/SAMPLES/G227_M18/Read_Strandness/G227_M18_Read_Strandness.txt RSeQC infer_experiment G227_M02_Read_Strandness /projectnb/wax-dk/max/G227/SAMPLES/G227_M02/Read_Strandness/G227_M02_Read_Strandness.txt RSeQC infer_experiment G227_M19_Read_Strandness /projectnb/wax-dk/max/G227/SAMPLES/G227_M19/Read_Strandness/G227_M19_Read_Strandness.txt RSeQC infer_experiment G227_M03_Read_Strandness /projectnb/wax-dk/max/G227/SAMPLES/G227_M03/Read_Strandness/G227_M03_Read_Strandness.txt RSeQC infer_experiment G227_M04_Read_Strandness /projectnb/wax-dk/max/G227/SAMPLES/G227_M04/Read_Strandness/G227_M04_Read_Strandness.txt RSeQC infer_experiment G227_M22_Read_Strandness /projectnb/wax-dk/max/G227/SAMPLES/G227_M22/Read_Strandness/G227_M22_Read_Strandness.txt RSeQC infer_experiment G227_M23_Read_Strandness /projectnb/wax-dk/max/G227/SAMPLES/G227_M23/Read_Strandness/G227_M23_Read_Strandness.txt RSeQC infer_experiment G227_M24_Read_Strandness /projectnb/wax-dk/max/G227/SAMPLES/G227_M24/Read_Strandness/G227_M24_Read_Strandness.txt RSeQC infer_experiment G227_M25_Read_Strandness /projectnb/wax-dk/max/G227/SAMPLES/G227_M25/Read_Strandness/G227_M25_Read_Strandness.txt RSeQC infer_experiment G227_M26_Read_Strandness /projectnb/wax-dk/max/G227/SAMPLES/G227_M26/Read_Strandness/G227_M26_Read_Strandness.txt RSeQC infer_experiment G227_M10_Read_Strandness /projectnb/wax-dk/max/G227/SAMPLES/G227_M10/Read_Strandness/G227_M10_Read_Strandness.txt RSeQC infer_experiment G227_M11_Read_Strandness /projectnb/wax-dk/max/G227/SAMPLES/G227_M11/Read_Strandness/G227_M11_Read_Strandness.txt RSeQC infer_experiment G227_M30_Read_Strandness /projectnb/wax-dk/max/G227/SAMPLES/G227_M30/Read_Strandness/G227_M30_Read_Strandness.txt featureCounts all_sections G227_M05_sorted /projectnb/wax-dk/max/G227/SAMPLES/G227_M05/featureCounts/RefSeqLncRNA76k_FullGeneBody_GTF/G227_M05_featureCounts.out.summary featureCounts all_sections G227_M06_sorted /projectnb/wax-dk/max/G227/SAMPLES/G227_M06/featureCounts/RefSeqLncRNA76k_FullGeneBody_GTF/G227_M06_featureCounts.out.summary featureCounts all_sections G227_M07_sorted /projectnb/wax-dk/max/G227/SAMPLES/G227_M07/featureCounts/RefSeqLncRNA76k_FullGeneBody_GTF/G227_M07_featureCounts.out.summary featureCounts all_sections G227_M08_sorted /projectnb/wax-dk/max/G227/SAMPLES/G227_M08/featureCounts/RefSeqLncRNA76k_FullGeneBody_GTF/G227_M08_featureCounts.out.summary featureCounts all_sections G227_M09_sorted /projectnb/wax-dk/max/G227/SAMPLES/G227_M09/featureCounts/RefSeqLncRNA76k_FullGeneBody_GTF/G227_M09_featureCounts.out.summary featureCounts all_sections G227_M27_sorted /projectnb/wax-dk/max/G227/SAMPLES/G227_M27/featureCounts/RefSeqLncRNA76k_FullGeneBody_GTF/G227_M27_featureCounts.out.summary featureCounts all_sections G227_M28_sorted /projectnb/wax-dk/max/G227/SAMPLES/G227_M28/featureCounts/RefSeqLncRNA76k_FullGeneBody_GTF/G227_M28_featureCounts.out.summary featureCounts all_sections G227_M12_sorted /projectnb/wax-dk/max/G227/SAMPLES/G227_M12/featureCounts/RefSeqLncRNA76k_FullGeneBody_GTF/G227_M12_featureCounts.out.summary featureCounts all_sections G227_M29_sorted /projectnb/wax-dk/max/G227/SAMPLES/G227_M29/featureCounts/RefSeqLncRNA76k_FullGeneBody_GTF/G227_M29_featureCounts.out.summary featureCounts all_sections G227_M13_sorted /projectnb/wax-dk/max/G227/SAMPLES/G227_M13/featureCounts/RefSeqLncRNA76k_FullGeneBody_GTF/G227_M13_featureCounts.out.summary featureCounts all_sections G227_M14_sorted /projectnb/wax-dk/max/G227/SAMPLES/G227_M14/featureCounts/RefSeqLncRNA76k_FullGeneBody_GTF/G227_M14_featureCounts.out.summary featureCounts all_sections G227_M15_sorted /projectnb/wax-dk/max/G227/SAMPLES/G227_M15/featureCounts/RefSeqLncRNA76k_FullGeneBody_GTF/G227_M15_featureCounts.out.summary featureCounts all_sections G227_M20_sorted /projectnb/wax-dk/max/G227/SAMPLES/G227_M20/featureCounts/RefSeqLncRNA76k_FullGeneBody_GTF/G227_M20_featureCounts.out.summary featureCounts all_sections G227_M21_sorted /projectnb/wax-dk/max/G227/SAMPLES/G227_M21/featureCounts/RefSeqLncRNA76k_FullGeneBody_GTF/G227_M21_featureCounts.out.summary featureCounts all_sections G227_M16_sorted /projectnb/wax-dk/max/G227/SAMPLES/G227_M16/featureCounts/RefSeqLncRNA76k_FullGeneBody_GTF/G227_M16_featureCounts.out.summary featureCounts all_sections G227_M17_sorted /projectnb/wax-dk/max/G227/SAMPLES/G227_M17/featureCounts/RefSeqLncRNA76k_FullGeneBody_GTF/G227_M17_featureCounts.out.summary featureCounts all_sections G227_M01_sorted /projectnb/wax-dk/max/G227/SAMPLES/G227_M01/featureCounts/RefSeqLncRNA76k_FullGeneBody_GTF/G227_M01_featureCounts.out.summary featureCounts all_sections G227_M18_sorted /projectnb/wax-dk/max/G227/SAMPLES/G227_M18/featureCounts/RefSeqLncRNA76k_FullGeneBody_GTF/G227_M18_featureCounts.out.summary featureCounts all_sections G227_M02_sorted /projectnb/wax-dk/max/G227/SAMPLES/G227_M02/featureCounts/RefSeqLncRNA76k_FullGeneBody_GTF/G227_M02_featureCounts.out.summary featureCounts all_sections G227_M19_sorted /projectnb/wax-dk/max/G227/SAMPLES/G227_M19/featureCounts/RefSeqLncRNA76k_FullGeneBody_GTF/G227_M19_featureCounts.out.summary featureCounts all_sections G227_M03_sorted /projectnb/wax-dk/max/G227/SAMPLES/G227_M03/featureCounts/RefSeqLncRNA76k_FullGeneBody_GTF/G227_M03_featureCounts.out.summary featureCounts all_sections G227_M04_sorted /projectnb/wax-dk/max/G227/SAMPLES/G227_M04/featureCounts/RefSeqLncRNA76k_FullGeneBody_GTF/G227_M04_featureCounts.out.summary featureCounts all_sections G227_M22_sorted /projectnb/wax-dk/max/G227/SAMPLES/G227_M22/featureCounts/RefSeqLncRNA76k_FullGeneBody_GTF/G227_M22_featureCounts.out.summary featureCounts all_sections G227_M23_sorted /projectnb/wax-dk/max/G227/SAMPLES/G227_M23/featureCounts/RefSeqLncRNA76k_FullGeneBody_GTF/G227_M23_featureCounts.out.summary featureCounts all_sections G227_M24_sorted /projectnb/wax-dk/max/G227/SAMPLES/G227_M24/featureCounts/RefSeqLncRNA76k_FullGeneBody_GTF/G227_M24_featureCounts.out.summary featureCounts all_sections G227_M25_sorted /projectnb/wax-dk/max/G227/SAMPLES/G227_M25/featureCounts/RefSeqLncRNA76k_FullGeneBody_GTF/G227_M25_featureCounts.out.summary featureCounts all_sections G227_M26_sorted /projectnb/wax-dk/max/G227/SAMPLES/G227_M26/featureCounts/RefSeqLncRNA76k_FullGeneBody_GTF/G227_M26_featureCounts.out.summary featureCounts all_sections G227_M10_sorted /projectnb/wax-dk/max/G227/SAMPLES/G227_M10/featureCounts/RefSeqLncRNA76k_FullGeneBody_GTF/G227_M10_featureCounts.out.summary featureCounts all_sections G227_M11_sorted /projectnb/wax-dk/max/G227/SAMPLES/G227_M11/featureCounts/RefSeqLncRNA76k_FullGeneBody_GTF/G227_M11_featureCounts.out.summary featureCounts all_sections G227_M30_sorted /projectnb/wax-dk/max/G227/SAMPLES/G227_M30/featureCounts/RefSeqLncRNA76k_FullGeneBody_GTF/G227_M30_featureCounts.out.summary Picard InsertSizeMetrics G227_M05_primary_unique /projectnb/wax-dk/max/G227/SAMPLES/G227_M05/CollectInsertSizeMetrics/G227_M05_metrics Picard InsertSizeMetrics G227_M06_primary_unique /projectnb/wax-dk/max/G227/SAMPLES/G227_M06/CollectInsertSizeMetrics/G227_M06_metrics Picard InsertSizeMetrics G227_M07_primary_unique /projectnb/wax-dk/max/G227/SAMPLES/G227_M07/CollectInsertSizeMetrics/G227_M07_metrics Picard InsertSizeMetrics G227_M08_primary_unique /projectnb/wax-dk/max/G227/SAMPLES/G227_M08/CollectInsertSizeMetrics/G227_M08_metrics Picard InsertSizeMetrics G227_M09_primary_unique /projectnb/wax-dk/max/G227/SAMPLES/G227_M09/CollectInsertSizeMetrics/G227_M09_metrics Picard InsertSizeMetrics G227_M27_primary_unique /projectnb/wax-dk/max/G227/SAMPLES/G227_M27/CollectInsertSizeMetrics/G227_M27_metrics Picard InsertSizeMetrics G227_M28_primary_unique /projectnb/wax-dk/max/G227/SAMPLES/G227_M28/CollectInsertSizeMetrics/G227_M28_metrics Picard InsertSizeMetrics G227_M12_primary_unique /projectnb/wax-dk/max/G227/SAMPLES/G227_M12/CollectInsertSizeMetrics/G227_M12_metrics Picard InsertSizeMetrics G227_M29_primary_unique /projectnb/wax-dk/max/G227/SAMPLES/G227_M29/CollectInsertSizeMetrics/G227_M29_metrics Picard InsertSizeMetrics G227_M13_primary_unique /projectnb/wax-dk/max/G227/SAMPLES/G227_M13/CollectInsertSizeMetrics/G227_M13_metrics Picard InsertSizeMetrics G227_M14_primary_unique /projectnb/wax-dk/max/G227/SAMPLES/G227_M14/CollectInsertSizeMetrics/G227_M14_metrics Picard InsertSizeMetrics G227_M15_primary_unique /projectnb/wax-dk/max/G227/SAMPLES/G227_M15/CollectInsertSizeMetrics/G227_M15_metrics Picard InsertSizeMetrics G227_M20_primary_unique /projectnb/wax-dk/max/G227/SAMPLES/G227_M20/CollectInsertSizeMetrics/G227_M20_metrics Picard InsertSizeMetrics G227_M21_primary_unique /projectnb/wax-dk/max/G227/SAMPLES/G227_M21/CollectInsertSizeMetrics/G227_M21_metrics Picard InsertSizeMetrics G227_M16_primary_unique /projectnb/wax-dk/max/G227/SAMPLES/G227_M16/CollectInsertSizeMetrics/G227_M16_metrics Picard InsertSizeMetrics G227_M17_primary_unique /projectnb/wax-dk/max/G227/SAMPLES/G227_M17/CollectInsertSizeMetrics/G227_M17_metrics Picard InsertSizeMetrics G227_M01_primary_unique /projectnb/wax-dk/max/G227/SAMPLES/G227_M01/CollectInsertSizeMetrics/G227_M01_metrics Picard InsertSizeMetrics G227_M18_primary_unique /projectnb/wax-dk/max/G227/SAMPLES/G227_M18/CollectInsertSizeMetrics/G227_M18_metrics Picard InsertSizeMetrics G227_M02_primary_unique /projectnb/wax-dk/max/G227/SAMPLES/G227_M02/CollectInsertSizeMetrics/G227_M02_metrics Picard InsertSizeMetrics G227_M19_primary_unique /projectnb/wax-dk/max/G227/SAMPLES/G227_M19/CollectInsertSizeMetrics/G227_M19_metrics Picard InsertSizeMetrics G227_M03_primary_unique /projectnb/wax-dk/max/G227/SAMPLES/G227_M03/CollectInsertSizeMetrics/G227_M03_metrics Picard InsertSizeMetrics G227_M04_primary_unique /projectnb/wax-dk/max/G227/SAMPLES/G227_M04/CollectInsertSizeMetrics/G227_M04_metrics Picard InsertSizeMetrics G227_M22_primary_unique /projectnb/wax-dk/max/G227/SAMPLES/G227_M22/CollectInsertSizeMetrics/G227_M22_metrics Picard InsertSizeMetrics G227_M23_primary_unique /projectnb/wax-dk/max/G227/SAMPLES/G227_M23/CollectInsertSizeMetrics/G227_M23_metrics Picard InsertSizeMetrics G227_M24_primary_unique /projectnb/wax-dk/max/G227/SAMPLES/G227_M24/CollectInsertSizeMetrics/G227_M24_metrics Picard InsertSizeMetrics G227_M25_primary_unique /projectnb/wax-dk/max/G227/SAMPLES/G227_M25/CollectInsertSizeMetrics/G227_M25_metrics Picard InsertSizeMetrics G227_M26_primary_unique /projectnb/wax-dk/max/G227/SAMPLES/G227_M26/CollectInsertSizeMetrics/G227_M26_metrics Picard InsertSizeMetrics G227_M10_primary_unique /projectnb/wax-dk/max/G227/SAMPLES/G227_M10/CollectInsertSizeMetrics/G227_M10_metrics Picard InsertSizeMetrics G227_M11_primary_unique /projectnb/wax-dk/max/G227/SAMPLES/G227_M11/CollectInsertSizeMetrics/G227_M11_metrics Picard InsertSizeMetrics G227_M30_primary_unique /projectnb/wax-dk/max/G227/SAMPLES/G227_M30/CollectInsertSizeMetrics/G227_M30_metrics Picard RnaSeqMetrics G227_M05_primary_unique /projectnb/wax-dk/max/G227/SAMPLES/G227_M05/CollectRnaSeqMetrics/G227_M05_metrics Picard RnaSeqMetrics G227_M06_primary_unique /projectnb/wax-dk/max/G227/SAMPLES/G227_M06/CollectRnaSeqMetrics/G227_M06_metrics Picard RnaSeqMetrics G227_M07_primary_unique /projectnb/wax-dk/max/G227/SAMPLES/G227_M07/CollectRnaSeqMetrics/G227_M07_metrics Picard RnaSeqMetrics G227_M08_primary_unique /projectnb/wax-dk/max/G227/SAMPLES/G227_M08/CollectRnaSeqMetrics/G227_M08_metrics Picard RnaSeqMetrics G227_M09_primary_unique /projectnb/wax-dk/max/G227/SAMPLES/G227_M09/CollectRnaSeqMetrics/G227_M09_metrics Picard RnaSeqMetrics G227_M27_primary_unique /projectnb/wax-dk/max/G227/SAMPLES/G227_M27/CollectRnaSeqMetrics/G227_M27_metrics Picard RnaSeqMetrics G227_M28_primary_unique /projectnb/wax-dk/max/G227/SAMPLES/G227_M28/CollectRnaSeqMetrics/G227_M28_metrics Picard RnaSeqMetrics G227_M12_primary_unique /projectnb/wax-dk/max/G227/SAMPLES/G227_M12/CollectRnaSeqMetrics/G227_M12_metrics Picard RnaSeqMetrics G227_M29_primary_unique /projectnb/wax-dk/max/G227/SAMPLES/G227_M29/CollectRnaSeqMetrics/G227_M29_metrics Picard RnaSeqMetrics G227_M13_primary_unique /projectnb/wax-dk/max/G227/SAMPLES/G227_M13/CollectRnaSeqMetrics/G227_M13_metrics Picard RnaSeqMetrics G227_M14_primary_unique /projectnb/wax-dk/max/G227/SAMPLES/G227_M14/CollectRnaSeqMetrics/G227_M14_metrics Picard RnaSeqMetrics G227_M15_primary_unique /projectnb/wax-dk/max/G227/SAMPLES/G227_M15/CollectRnaSeqMetrics/G227_M15_metrics Picard RnaSeqMetrics G227_M20_primary_unique /projectnb/wax-dk/max/G227/SAMPLES/G227_M20/CollectRnaSeqMetrics/G227_M20_metrics Picard RnaSeqMetrics G227_M21_primary_unique /projectnb/wax-dk/max/G227/SAMPLES/G227_M21/CollectRnaSeqMetrics/G227_M21_metrics Picard RnaSeqMetrics G227_M16_primary_unique /projectnb/wax-dk/max/G227/SAMPLES/G227_M16/CollectRnaSeqMetrics/G227_M16_metrics Picard RnaSeqMetrics G227_M17_primary_unique /projectnb/wax-dk/max/G227/SAMPLES/G227_M17/CollectRnaSeqMetrics/G227_M17_metrics Picard RnaSeqMetrics G227_M01_primary_unique /projectnb/wax-dk/max/G227/SAMPLES/G227_M01/CollectRnaSeqMetrics/G227_M01_metrics Picard RnaSeqMetrics G227_M18_primary_unique /projectnb/wax-dk/max/G227/SAMPLES/G227_M18/CollectRnaSeqMetrics/G227_M18_metrics Picard RnaSeqMetrics G227_M02_primary_unique /projectnb/wax-dk/max/G227/SAMPLES/G227_M02/CollectRnaSeqMetrics/G227_M02_metrics Picard RnaSeqMetrics G227_M19_primary_unique /projectnb/wax-dk/max/G227/SAMPLES/G227_M19/CollectRnaSeqMetrics/G227_M19_metrics Picard RnaSeqMetrics G227_M03_primary_unique /projectnb/wax-dk/max/G227/SAMPLES/G227_M03/CollectRnaSeqMetrics/G227_M03_metrics Picard RnaSeqMetrics G227_M04_primary_unique /projectnb/wax-dk/max/G227/SAMPLES/G227_M04/CollectRnaSeqMetrics/G227_M04_metrics Picard RnaSeqMetrics G227_M22_primary_unique /projectnb/wax-dk/max/G227/SAMPLES/G227_M22/CollectRnaSeqMetrics/G227_M22_metrics Picard RnaSeqMetrics G227_M23_primary_unique /projectnb/wax-dk/max/G227/SAMPLES/G227_M23/CollectRnaSeqMetrics/G227_M23_metrics Picard RnaSeqMetrics G227_M24_primary_unique /projectnb/wax-dk/max/G227/SAMPLES/G227_M24/CollectRnaSeqMetrics/G227_M24_metrics Picard RnaSeqMetrics G227_M25_primary_unique /projectnb/wax-dk/max/G227/SAMPLES/G227_M25/CollectRnaSeqMetrics/G227_M25_metrics Picard RnaSeqMetrics G227_M26_primary_unique /projectnb/wax-dk/max/G227/SAMPLES/G227_M26/CollectRnaSeqMetrics/G227_M26_metrics Picard RnaSeqMetrics G227_M10_primary_unique /projectnb/wax-dk/max/G227/SAMPLES/G227_M10/CollectRnaSeqMetrics/G227_M10_metrics Picard RnaSeqMetrics G227_M11_primary_unique /projectnb/wax-dk/max/G227/SAMPLES/G227_M11/CollectRnaSeqMetrics/G227_M11_metrics Picard RnaSeqMetrics G227_M30_primary_unique /projectnb/wax-dk/max/G227/SAMPLES/G227_M30/CollectRnaSeqMetrics/G227_M30_metrics Samtools flagstat G227_M05_statistics_for_primary_unique_reads /projectnb/wax-dk/max/G227/SAMPLES/G227_M05/aligner/G227_M05_statistics_for_primary_unique_reads.txt Samtools flagstat G227_M05_statistics_for_primary_reads /projectnb/wax-dk/max/G227/SAMPLES/G227_M05/aligner/G227_M05_statistics_for_primary_reads.txt Samtools flagstat G227_M05_statistics_for_all_accepted_reads /projectnb/wax-dk/max/G227/SAMPLES/G227_M05/aligner/G227_M05_statistics_for_all_accepted_reads.txt Samtools flagstat G227_M06_statistics_for_all_accepted_reads /projectnb/wax-dk/max/G227/SAMPLES/G227_M06/aligner/G227_M06_statistics_for_all_accepted_reads.txt Samtools flagstat G227_M06_statistics_for_primary_reads /projectnb/wax-dk/max/G227/SAMPLES/G227_M06/aligner/G227_M06_statistics_for_primary_reads.txt Samtools flagstat G227_M06_statistics_for_primary_unique_reads /projectnb/wax-dk/max/G227/SAMPLES/G227_M06/aligner/G227_M06_statistics_for_primary_unique_reads.txt Samtools flagstat G227_M07_statistics_for_primary_unique_reads /projectnb/wax-dk/max/G227/SAMPLES/G227_M07/aligner/G227_M07_statistics_for_primary_unique_reads.txt Samtools flagstat G227_M07_statistics_for_all_accepted_reads /projectnb/wax-dk/max/G227/SAMPLES/G227_M07/aligner/G227_M07_statistics_for_all_accepted_reads.txt Samtools flagstat G227_M07_statistics_for_primary_reads /projectnb/wax-dk/max/G227/SAMPLES/G227_M07/aligner/G227_M07_statistics_for_primary_reads.txt Samtools flagstat G227_M08_statistics_for_primary_reads /projectnb/wax-dk/max/G227/SAMPLES/G227_M08/aligner/G227_M08_statistics_for_primary_reads.txt Samtools flagstat G227_M08_statistics_for_all_accepted_reads /projectnb/wax-dk/max/G227/SAMPLES/G227_M08/aligner/G227_M08_statistics_for_all_accepted_reads.txt Samtools flagstat G227_M08_statistics_for_primary_unique_reads /projectnb/wax-dk/max/G227/SAMPLES/G227_M08/aligner/G227_M08_statistics_for_primary_unique_reads.txt Samtools flagstat G227_M09_statistics_for_all_accepted_reads /projectnb/wax-dk/max/G227/SAMPLES/G227_M09/aligner/G227_M09_statistics_for_all_accepted_reads.txt Samtools flagstat G227_M09_statistics_for_primary_unique_reads /projectnb/wax-dk/max/G227/SAMPLES/G227_M09/aligner/G227_M09_statistics_for_primary_unique_reads.txt Samtools flagstat G227_M09_statistics_for_primary_reads /projectnb/wax-dk/max/G227/SAMPLES/G227_M09/aligner/G227_M09_statistics_for_primary_reads.txt Samtools flagstat G227_M27_statistics_for_primary_unique_reads /projectnb/wax-dk/max/G227/SAMPLES/G227_M27/aligner/G227_M27_statistics_for_primary_unique_reads.txt Samtools flagstat G227_M27_statistics_for_all_accepted_reads /projectnb/wax-dk/max/G227/SAMPLES/G227_M27/aligner/G227_M27_statistics_for_all_accepted_reads.txt Samtools flagstat G227_M27_statistics_for_primary_reads /projectnb/wax-dk/max/G227/SAMPLES/G227_M27/aligner/G227_M27_statistics_for_primary_reads.txt Samtools flagstat G227_M28_statistics_for_all_accepted_reads /projectnb/wax-dk/max/G227/SAMPLES/G227_M28/aligner/G227_M28_statistics_for_all_accepted_reads.txt Samtools flagstat G227_M28_statistics_for_primary_reads /projectnb/wax-dk/max/G227/SAMPLES/G227_M28/aligner/G227_M28_statistics_for_primary_reads.txt Samtools flagstat G227_M28_statistics_for_primary_unique_reads /projectnb/wax-dk/max/G227/SAMPLES/G227_M28/aligner/G227_M28_statistics_for_primary_unique_reads.txt Samtools flagstat G227_M12_statistics_for_primary_unique_reads /projectnb/wax-dk/max/G227/SAMPLES/G227_M12/aligner/G227_M12_statistics_for_primary_unique_reads.txt Samtools flagstat G227_M12_statistics_for_primary_reads /projectnb/wax-dk/max/G227/SAMPLES/G227_M12/aligner/G227_M12_statistics_for_primary_reads.txt Samtools flagstat G227_M12_statistics_for_all_accepted_reads /projectnb/wax-dk/max/G227/SAMPLES/G227_M12/aligner/G227_M12_statistics_for_all_accepted_reads.txt Samtools flagstat G227_M29_statistics_for_primary_unique_reads /projectnb/wax-dk/max/G227/SAMPLES/G227_M29/aligner/G227_M29_statistics_for_primary_unique_reads.txt Samtools flagstat G227_M29_statistics_for_all_accepted_reads /projectnb/wax-dk/max/G227/SAMPLES/G227_M29/aligner/G227_M29_statistics_for_all_accepted_reads.txt Samtools flagstat G227_M29_statistics_for_primary_reads /projectnb/wax-dk/max/G227/SAMPLES/G227_M29/aligner/G227_M29_statistics_for_primary_reads.txt Samtools flagstat G227_M13_statistics_for_all_accepted_reads /projectnb/wax-dk/max/G227/SAMPLES/G227_M13/aligner/G227_M13_statistics_for_all_accepted_reads.txt Samtools flagstat G227_M13_statistics_for_primary_unique_reads /projectnb/wax-dk/max/G227/SAMPLES/G227_M13/aligner/G227_M13_statistics_for_primary_unique_reads.txt Samtools flagstat G227_M13_statistics_for_primary_reads /projectnb/wax-dk/max/G227/SAMPLES/G227_M13/aligner/G227_M13_statistics_for_primary_reads.txt Samtools flagstat G227_M14_statistics_for_primary_unique_reads /projectnb/wax-dk/max/G227/SAMPLES/G227_M14/aligner/G227_M14_statistics_for_primary_unique_reads.txt Samtools flagstat G227_M14_statistics_for_all_accepted_reads /projectnb/wax-dk/max/G227/SAMPLES/G227_M14/aligner/G227_M14_statistics_for_all_accepted_reads.txt Samtools flagstat G227_M14_statistics_for_primary_reads /projectnb/wax-dk/max/G227/SAMPLES/G227_M14/aligner/G227_M14_statistics_for_primary_reads.txt Samtools flagstat G227_M15_statistics_for_all_accepted_reads /projectnb/wax-dk/max/G227/SAMPLES/G227_M15/aligner/G227_M15_statistics_for_all_accepted_reads.txt Samtools flagstat G227_M15_statistics_for_primary_reads /projectnb/wax-dk/max/G227/SAMPLES/G227_M15/aligner/G227_M15_statistics_for_primary_reads.txt Samtools flagstat G227_M15_statistics_for_primary_unique_reads /projectnb/wax-dk/max/G227/SAMPLES/G227_M15/aligner/G227_M15_statistics_for_primary_unique_reads.txt Samtools flagstat G227_M20_statistics_for_all_accepted_reads /projectnb/wax-dk/max/G227/SAMPLES/G227_M20/aligner/G227_M20_statistics_for_all_accepted_reads.txt Samtools flagstat G227_M20_statistics_for_primary_reads /projectnb/wax-dk/max/G227/SAMPLES/G227_M20/aligner/G227_M20_statistics_for_primary_reads.txt Samtools flagstat G227_M20_statistics_for_primary_unique_reads /projectnb/wax-dk/max/G227/SAMPLES/G227_M20/aligner/G227_M20_statistics_for_primary_unique_reads.txt Samtools flagstat G227_M21_statistics_for_primary_unique_reads /projectnb/wax-dk/max/G227/SAMPLES/G227_M21/aligner/G227_M21_statistics_for_primary_unique_reads.txt Samtools flagstat G227_M21_statistics_for_primary_reads /projectnb/wax-dk/max/G227/SAMPLES/G227_M21/aligner/G227_M21_statistics_for_primary_reads.txt Samtools flagstat G227_M21_statistics_for_all_accepted_reads /projectnb/wax-dk/max/G227/SAMPLES/G227_M21/aligner/G227_M21_statistics_for_all_accepted_reads.txt Samtools flagstat G227_M16_statistics_for_all_accepted_reads /projectnb/wax-dk/max/G227/SAMPLES/G227_M16/aligner/G227_M16_statistics_for_all_accepted_reads.txt Samtools flagstat G227_M16_statistics_for_primary_reads /projectnb/wax-dk/max/G227/SAMPLES/G227_M16/aligner/G227_M16_statistics_for_primary_reads.txt Samtools flagstat G227_M16_statistics_for_primary_unique_reads /projectnb/wax-dk/max/G227/SAMPLES/G227_M16/aligner/G227_M16_statistics_for_primary_unique_reads.txt Samtools flagstat G227_M17_statistics_for_all_accepted_reads /projectnb/wax-dk/max/G227/SAMPLES/G227_M17/aligner/G227_M17_statistics_for_all_accepted_reads.txt Samtools flagstat G227_M17_statistics_for_primary_unique_reads /projectnb/wax-dk/max/G227/SAMPLES/G227_M17/aligner/G227_M17_statistics_for_primary_unique_reads.txt Samtools flagstat G227_M17_statistics_for_primary_reads /projectnb/wax-dk/max/G227/SAMPLES/G227_M17/aligner/G227_M17_statistics_for_primary_reads.txt Samtools flagstat G227_M01_statistics_for_primary_reads /projectnb/wax-dk/max/G227/SAMPLES/G227_M01/aligner/G227_M01_statistics_for_primary_reads.txt Samtools flagstat G227_M01_statistics_for_all_accepted_reads /projectnb/wax-dk/max/G227/SAMPLES/G227_M01/aligner/G227_M01_statistics_for_all_accepted_reads.txt Samtools flagstat G227_M01_statistics_for_primary_unique_reads /projectnb/wax-dk/max/G227/SAMPLES/G227_M01/aligner/G227_M01_statistics_for_primary_unique_reads.txt Samtools flagstat G227_M18_statistics_for_primary_reads /projectnb/wax-dk/max/G227/SAMPLES/G227_M18/aligner/G227_M18_statistics_for_primary_reads.txt Samtools flagstat G227_M18_statistics_for_primary_unique_reads /projectnb/wax-dk/max/G227/SAMPLES/G227_M18/aligner/G227_M18_statistics_for_primary_unique_reads.txt Samtools flagstat G227_M18_statistics_for_all_accepted_reads /projectnb/wax-dk/max/G227/SAMPLES/G227_M18/aligner/G227_M18_statistics_for_all_accepted_reads.txt Samtools flagstat G227_M02_statistics_for_all_accepted_reads /projectnb/wax-dk/max/G227/SAMPLES/G227_M02/aligner/G227_M02_statistics_for_all_accepted_reads.txt Samtools flagstat G227_M02_statistics_for_primary_unique_reads /projectnb/wax-dk/max/G227/SAMPLES/G227_M02/aligner/G227_M02_statistics_for_primary_unique_reads.txt Samtools flagstat G227_M02_statistics_for_primary_reads /projectnb/wax-dk/max/G227/SAMPLES/G227_M02/aligner/G227_M02_statistics_for_primary_reads.txt Samtools flagstat G227_M19_statistics_for_primary_unique_reads /projectnb/wax-dk/max/G227/SAMPLES/G227_M19/aligner/G227_M19_statistics_for_primary_unique_reads.txt Samtools flagstat G227_M19_statistics_for_all_accepted_reads /projectnb/wax-dk/max/G227/SAMPLES/G227_M19/aligner/G227_M19_statistics_for_all_accepted_reads.txt Samtools flagstat G227_M19_statistics_for_primary_reads /projectnb/wax-dk/max/G227/SAMPLES/G227_M19/aligner/G227_M19_statistics_for_primary_reads.txt Samtools flagstat G227_M03_statistics_for_all_accepted_reads /projectnb/wax-dk/max/G227/SAMPLES/G227_M03/aligner/G227_M03_statistics_for_all_accepted_reads.txt Samtools flagstat G227_M03_statistics_for_primary_unique_reads /projectnb/wax-dk/max/G227/SAMPLES/G227_M03/aligner/G227_M03_statistics_for_primary_unique_reads.txt Samtools flagstat G227_M03_statistics_for_primary_reads /projectnb/wax-dk/max/G227/SAMPLES/G227_M03/aligner/G227_M03_statistics_for_primary_reads.txt Samtools flagstat G227_M04_statistics_for_primary_unique_reads /projectnb/wax-dk/max/G227/SAMPLES/G227_M04/aligner/G227_M04_statistics_for_primary_unique_reads.txt Samtools flagstat G227_M04_statistics_for_all_accepted_reads /projectnb/wax-dk/max/G227/SAMPLES/G227_M04/aligner/G227_M04_statistics_for_all_accepted_reads.txt Samtools flagstat G227_M04_statistics_for_primary_reads /projectnb/wax-dk/max/G227/SAMPLES/G227_M04/aligner/G227_M04_statistics_for_primary_reads.txt Samtools flagstat G227_M22_statistics_for_primary_reads /projectnb/wax-dk/max/G227/SAMPLES/G227_M22/aligner/G227_M22_statistics_for_primary_reads.txt Samtools flagstat G227_M22_statistics_for_all_accepted_reads /projectnb/wax-dk/max/G227/SAMPLES/G227_M22/aligner/G227_M22_statistics_for_all_accepted_reads.txt Samtools flagstat G227_M22_statistics_for_primary_unique_reads /projectnb/wax-dk/max/G227/SAMPLES/G227_M22/aligner/G227_M22_statistics_for_primary_unique_reads.txt Samtools flagstat G227_M23_statistics_for_primary_reads /projectnb/wax-dk/max/G227/SAMPLES/G227_M23/aligner/G227_M23_statistics_for_primary_reads.txt Samtools flagstat G227_M23_statistics_for_all_accepted_reads /projectnb/wax-dk/max/G227/SAMPLES/G227_M23/aligner/G227_M23_statistics_for_all_accepted_reads.txt Samtools flagstat G227_M23_statistics_for_primary_unique_reads /projectnb/wax-dk/max/G227/SAMPLES/G227_M23/aligner/G227_M23_statistics_for_primary_unique_reads.txt Samtools flagstat G227_M24_statistics_for_all_accepted_reads /projectnb/wax-dk/max/G227/SAMPLES/G227_M24/aligner/G227_M24_statistics_for_all_accepted_reads.txt Samtools flagstat G227_M24_statistics_for_primary_reads /projectnb/wax-dk/max/G227/SAMPLES/G227_M24/aligner/G227_M24_statistics_for_primary_reads.txt Samtools flagstat G227_M24_statistics_for_primary_unique_reads /projectnb/wax-dk/max/G227/SAMPLES/G227_M24/aligner/G227_M24_statistics_for_primary_unique_reads.txt Samtools flagstat G227_M25_statistics_for_primary_reads /projectnb/wax-dk/max/G227/SAMPLES/G227_M25/aligner/G227_M25_statistics_for_primary_reads.txt Samtools flagstat G227_M25_statistics_for_primary_unique_reads /projectnb/wax-dk/max/G227/SAMPLES/G227_M25/aligner/G227_M25_statistics_for_primary_unique_reads.txt Samtools flagstat G227_M25_statistics_for_all_accepted_reads /projectnb/wax-dk/max/G227/SAMPLES/G227_M25/aligner/G227_M25_statistics_for_all_accepted_reads.txt Samtools flagstat G227_M26_statistics_for_primary_reads /projectnb/wax-dk/max/G227/SAMPLES/G227_M26/aligner/G227_M26_statistics_for_primary_reads.txt Samtools flagstat G227_M26_statistics_for_primary_unique_reads /projectnb/wax-dk/max/G227/SAMPLES/G227_M26/aligner/G227_M26_statistics_for_primary_unique_reads.txt Samtools flagstat G227_M26_statistics_for_all_accepted_reads /projectnb/wax-dk/max/G227/SAMPLES/G227_M26/aligner/G227_M26_statistics_for_all_accepted_reads.txt Samtools flagstat G227_M10_statistics_for_primary_unique_reads /projectnb/wax-dk/max/G227/SAMPLES/G227_M10/aligner/G227_M10_statistics_for_primary_unique_reads.txt Samtools flagstat G227_M10_statistics_for_primary_reads /projectnb/wax-dk/max/G227/SAMPLES/G227_M10/aligner/G227_M10_statistics_for_primary_reads.txt Samtools flagstat G227_M10_statistics_for_all_accepted_reads /projectnb/wax-dk/max/G227/SAMPLES/G227_M10/aligner/G227_M10_statistics_for_all_accepted_reads.txt Samtools flagstat G227_M11_statistics_for_primary_reads /projectnb/wax-dk/max/G227/SAMPLES/G227_M11/aligner/G227_M11_statistics_for_primary_reads.txt Samtools flagstat G227_M11_statistics_for_all_accepted_reads /projectnb/wax-dk/max/G227/SAMPLES/G227_M11/aligner/G227_M11_statistics_for_all_accepted_reads.txt Samtools flagstat G227_M11_statistics_for_primary_unique_reads /projectnb/wax-dk/max/G227/SAMPLES/G227_M11/aligner/G227_M11_statistics_for_primary_unique_reads.txt Samtools flagstat G227_M30_statistics_for_primary_unique_reads /projectnb/wax-dk/max/G227/SAMPLES/G227_M30/aligner/G227_M30_statistics_for_primary_unique_reads.txt Samtools flagstat G227_M30_statistics_for_all_accepted_reads /projectnb/wax-dk/max/G227/SAMPLES/G227_M30/aligner/G227_M30_statistics_for_all_accepted_reads.txt Samtools flagstat G227_M30_statistics_for_primary_reads /projectnb/wax-dk/max/G227/SAMPLES/G227_M30/aligner/G227_M30_statistics_for_primary_reads.txt STAR SummaryLog G227_M05_G227_M05 /projectnb/wax-dk/max/G227/SAMPLES/G227_M05/aligner/G227_M05_G227_M05_Log.final.out STAR SummaryLog G227_M06_G227_M06 /projectnb/wax-dk/max/G227/SAMPLES/G227_M06/aligner/G227_M06_G227_M06_Log.final.out STAR SummaryLog G227_M07_G227_M07 /projectnb/wax-dk/max/G227/SAMPLES/G227_M07/aligner/G227_M07_G227_M07_Log.final.out STAR SummaryLog G227_M08_G227_M08 /projectnb/wax-dk/max/G227/SAMPLES/G227_M08/aligner/G227_M08_G227_M08_Log.final.out STAR SummaryLog G227_M09_G227_M09 /projectnb/wax-dk/max/G227/SAMPLES/G227_M09/aligner/G227_M09_G227_M09_Log.final.out STAR SummaryLog G227_M27_G227_M27 /projectnb/wax-dk/max/G227/SAMPLES/G227_M27/aligner/G227_M27_G227_M27_Log.final.out STAR SummaryLog G227_M28_G227_M28 /projectnb/wax-dk/max/G227/SAMPLES/G227_M28/aligner/G227_M28_G227_M28_Log.final.out STAR SummaryLog G227_M12_G227_M12 /projectnb/wax-dk/max/G227/SAMPLES/G227_M12/aligner/G227_M12_G227_M12_Log.final.out STAR SummaryLog G227_M29_G227_M29 /projectnb/wax-dk/max/G227/SAMPLES/G227_M29/aligner/G227_M29_G227_M29_Log.final.out STAR SummaryLog G227_M13_G227_M13 /projectnb/wax-dk/max/G227/SAMPLES/G227_M13/aligner/G227_M13_G227_M13_Log.final.out STAR SummaryLog G227_M14_G227_M14 /projectnb/wax-dk/max/G227/SAMPLES/G227_M14/aligner/G227_M14_G227_M14_Log.final.out STAR SummaryLog G227_M15_G227_M15 /projectnb/wax-dk/max/G227/SAMPLES/G227_M15/aligner/G227_M15_G227_M15_Log.final.out STAR SummaryLog G227_M20_G227_M20 /projectnb/wax-dk/max/G227/SAMPLES/G227_M20/aligner/G227_M20_G227_M20_Log.final.out STAR SummaryLog G227_M21_G227_M21 /projectnb/wax-dk/max/G227/SAMPLES/G227_M21/aligner/G227_M21_G227_M21_Log.final.out STAR SummaryLog G227_M16_G227_M16 /projectnb/wax-dk/max/G227/SAMPLES/G227_M16/aligner/G227_M16_G227_M16_Log.final.out STAR SummaryLog G227_M17_G227_M17 /projectnb/wax-dk/max/G227/SAMPLES/G227_M17/aligner/G227_M17_G227_M17_Log.final.out STAR SummaryLog G227_M01_G227_M01 /projectnb/wax-dk/max/G227/SAMPLES/G227_M01/aligner/G227_M01_G227_M01_Log.final.out STAR SummaryLog G227_M18_G227_M18 /projectnb/wax-dk/max/G227/SAMPLES/G227_M18/aligner/G227_M18_G227_M18_Log.final.out STAR SummaryLog G227_M02_G227_M02 /projectnb/wax-dk/max/G227/SAMPLES/G227_M02/aligner/G227_M02_G227_M02_Log.final.out STAR SummaryLog G227_M19_G227_M19 /projectnb/wax-dk/max/G227/SAMPLES/G227_M19/aligner/G227_M19_G227_M19_Log.final.out STAR SummaryLog G227_M03_G227_M03 /projectnb/wax-dk/max/G227/SAMPLES/G227_M03/aligner/G227_M03_G227_M03_Log.final.out STAR SummaryLog G227_M04_G227_M04 /projectnb/wax-dk/max/G227/SAMPLES/G227_M04/aligner/G227_M04_G227_M04_Log.final.out STAR SummaryLog G227_M22_G227_M22 /projectnb/wax-dk/max/G227/SAMPLES/G227_M22/aligner/G227_M22_G227_M22_Log.final.out STAR SummaryLog G227_M23_G227_M23 /projectnb/wax-dk/max/G227/SAMPLES/G227_M23/aligner/G227_M23_G227_M23_Log.final.out STAR SummaryLog G227_M24_G227_M24 /projectnb/wax-dk/max/G227/SAMPLES/G227_M24/aligner/G227_M24_G227_M24_Log.final.out STAR SummaryLog G227_M25_G227_M25 /projectnb/wax-dk/max/G227/SAMPLES/G227_M25/aligner/G227_M25_G227_M25_Log.final.out STAR SummaryLog G227_M26_G227_M26 /projectnb/wax-dk/max/G227/SAMPLES/G227_M26/aligner/G227_M26_G227_M26_Log.final.out STAR SummaryLog G227_M10_G227_M10 /projectnb/wax-dk/max/G227/SAMPLES/G227_M10/aligner/G227_M10_G227_M10_Log.final.out STAR SummaryLog G227_M11_G227_M11 /projectnb/wax-dk/max/G227/SAMPLES/G227_M11/aligner/G227_M11_G227_M11_Log.final.out STAR SummaryLog G227_M30_G227_M30 /projectnb/wax-dk/max/G227/SAMPLES/G227_M30/aligner/G227_M30_G227_M30_Log.final.out fastp all_sections G227_M24_CKDL240023967-1A_22NF25LT3_L5_1 /projectnb2/wax-dk/max/G227/Scripts/03_FASTQC/Job_Summary/G227_M24_FASTP/fastp.json fastp all_sections G227_M17_CKDL240023967-1A_22NF25LT3_L5_1 /projectnb2/wax-dk/max/G227/Scripts/03_FASTQC/Job_Summary/G227_M17_FASTP/fastp.json fastp all_sections G227_M16_CKDL240023967-1A_22NF25LT3_L5_1 /projectnb2/wax-dk/max/G227/Scripts/03_FASTQC/Job_Summary/G227_M16_FASTP/fastp.json fastp all_sections G227_M10_CKDL240023967-1A_22NF25LT3_L5_1 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