Sample fastp_mqc-generalstats-fastp-pct_duplication fastp_mqc-generalstats-fastp-after_filtering_q30_rate fastp_mqc-generalstats-fastp-after_filtering_q30_bases fastp_mqc-generalstats-fastp-after_filtering_gc_content fastp_mqc-generalstats-fastp-pct_surviving fastp_mqc-generalstats-fastp-pct_adapter FastQC_mqc-generalstats-fastqc-percent_duplicates FastQC_mqc-generalstats-fastqc-percent_gc FastQC_mqc-generalstats-fastqc-avg_sequence_length FastQC_mqc-generalstats-fastqc-percent_fails FastQC_mqc-generalstats-fastqc-total_sequences STAR_mqc-generalstats-star-uniquely_mapped_percent STAR_mqc-generalstats-star-uniquely_mapped Picard_mqc-generalstats-picard-PCT_RIBOSOMAL_BASES Picard_mqc-generalstats-picard-PCT_MRNA_BASES Picard_mqc-generalstats-picard-summed_median Picard_mqc-generalstats-picard-summed_mean featureCounts_mqc-generalstats-featurecounts-percent_assigned featureCounts_mqc-generalstats-featurecounts-Assigned Samtools_mqc-generalstats-samtools-flagstat_total Samtools_mqc-generalstats-samtools-mapped_passed G227_M01_CKDL240023967-1A_22NF25LT3_L5_1 15.5642 0.944795 5035994006.0 0.530978 98.53101992903854 73.80003879522744 55.26628718818326 54.0 150.0 27.27272727272727 25503137.0 G227_M01_CKDL240023967-1A_22NF25LT3_L5_2 54.1097221242571 53.0 150.0 36.36363636363637 25503137.0 G227_M01_G227_M01 20.74 5289296.0 G227_M01_primary_unique 32.2766 23.160600000000002 152 171.710531 G227_M01_sorted 35.19937246847217 1861799 G227_M01_statistics_for_all_accepted_reads 15162624 15162624 G227_M01_statistics_for_primary_reads 11920394 11920394 G227_M01_statistics_for_primary_unique_reads 10578592 10578592 G227_M02_CKDL240023967-1A_22NF25LT3_L5_1 36.4174 0.961871 4952868186.0 0.534519 98.79988746527374 32.88168450378359 62.58708705342558 53.0 150.0 18.181818181818183 18742659.0 G227_M02_CKDL240023967-1A_22NF25LT3_L5_2 61.32990873249428 53.0 150.0 36.36363636363637 18742659.0 G227_M02_G227_M02 60.33 11308324.0 G227_M02_primary_unique 38.8688 15.2422 189 208.052076 G227_M02_sorted 61.7650413978234 6984591 G227_M02_statistics_for_all_accepted_reads 27218868 27218868 G227_M02_statistics_for_primary_reads 24209850 24209850 G227_M02_statistics_for_primary_unique_reads 22616648 22616648 G227_M03_CKDL240023967-1A_22NF25LT3_L5_1 31.643300000000004 0.957077 6342211308.0 0.550294 98.6863973366092 59.356404745523264 69.80777836295651 55.0 150.0 18.181818181818183 27237460.0 G227_M03_CKDL240023967-1A_22NF25LT3_L5_2 69.03354619887753 54.0 150.0 36.36363636363637 27237460.0 G227_M03_G227_M03 39.25 10691202.0 G227_M03_primary_unique 48.7917 16.348499999999998 162 180.9144 G227_M03_sorted 52.22329537876097 5583298 G227_M03_statistics_for_all_accepted_reads 28153554 28153554 G227_M03_statistics_for_primary_reads 23546410 23546410 G227_M03_statistics_for_primary_unique_reads 21382404 21382404 G227_M04_CKDL240023967-1A_22NF25LT3_L5_1 18.1935 0.951683 5238872227.0 0.538853 98.33124874614889 70.49219273561161 57.7534017319291 54.0 150.0 27.27272727272727 25735711.0 G227_M04_CKDL240023967-1A_22NF25LT3_L5_2 57.02170785504045 54.0 150.0 36.36363636363637 25735711.0 G227_M04_G227_M04 27.17 6991252.0 G227_M04_primary_unique 38.6812 15.364600000000001 160 181.82191 G227_M04_sorted 53.5143347715116 3741322 G227_M04_statistics_for_all_accepted_reads 18358354 18358354 G227_M04_statistics_for_primary_reads 15313070 15313070 G227_M04_statistics_for_primary_unique_reads 13982504 13982504 G227_M05_CKDL240023967-1A_22NF25LT3_L5_1 15.822700000000001 0.957023 4947689379.0 0.520758 98.34825180900847 78.00677429550683 57.29066922590037 54.0 150.0 36.36363636363637 24700133.0 G227_M05_CKDL240023967-1A_22NF25LT3_L5_2 56.38359215520061 52.0 150.0 27.27272727272727 24700133.0 G227_M05_G227_M05 20.71 5114374.0 G227_M05_primary_unique 36.531200000000005 17.7939 146 162.334802 G227_M05_sorted 47.6142143691486 2435169 G227_M05_statistics_for_all_accepted_reads 15115276 15115276 G227_M05_statistics_for_primary_reads 11590126 11590126 G227_M05_statistics_for_primary_unique_reads 10228748 10228748 G227_M06_CKDL240023967-1A_22NF25LT3_L5_1 29.646 0.953713 5863616392.0 0.586007 98.53572377764002 68.26098142965677 71.61643397364058 57.0 150.0 27.27272727272727 26868701.0 G227_M06_CKDL240023967-1A_22NF25LT3_L5_2 70.9545051092983 57.0 150.0 45.45454545454545 26868701.0 G227_M06_G227_M06 30.22 8120300.0 G227_M06_primary_unique 50.3772 24.1806 150 166.736731 G227_M06_sorted 46.61200940851939 3785035 G227_M06_statistics_for_all_accepted_reads 21968762 21968762 G227_M06_statistics_for_primary_reads 17994732 17994732 G227_M06_statistics_for_primary_unique_reads 16240600 16240600 G227_M07_CKDL240023967-1A_22NF25LT3_L5_1 25.621899999999997 0.958969 5422877645.0 0.51016 98.66926032797481 58.736679859222384 59.629934524768004 51.0 150.0 27.27272727272727 23069576.0 G227_M07_CKDL240023967-1A_22NF25LT3_L5_2 58.702459949774976 51.0 150.0 36.36363636363637 23069576.0 G227_M07_G227_M07 37.5 8651049.0 G227_M07_primary_unique 37.5491 13.5911 161 180.905554 G227_M07_sorted 52.323562148359116 4526537 G227_M07_statistics_for_all_accepted_reads 24553586 24553586 G227_M07_statistics_for_primary_reads 19447410 19447410 G227_M07_statistics_for_primary_unique_reads 17302098 17302098 G227_M08_CKDL240023967-1A_22NF25LT3_L5_1 29.5252 0.959909 5132257264.0 0.510297 98.67008131535509 53.911476852284565 67.54379973401956 51.0 150.0 27.27272727272727 21323033.0 G227_M08_CKDL240023967-1A_22NF25LT3_L5_2 66.05381497786843 51.0 150.0 36.36363636363637 21323033.0 G227_M08_G227_M08 39.14 8345507.0 G227_M08_primary_unique 43.3632 14.480199999999998 172 193.948916 G227_M08_sorted 52.14266790501764 4351570 G227_M08_statistics_for_all_accepted_reads 23715554 23715554 G227_M08_statistics_for_primary_reads 18860964 18860964 G227_M08_statistics_for_primary_unique_reads 16691014 16691014 G227_M09_CKDL240023967-1A_22NF25LT3_L5_1 40.5533 0.953999 5345589368.0 0.594663 98.35361853671363 34.96202836471426 73.96010967346601 58.0 150.0 27.27272727272727 20605249.0 G227_M09_CKDL240023967-1A_22NF25LT3_L5_2 73.29681724991892 59.0 150.0 27.27272727272727 20605249.0 G227_M09_G227_M09 49.16 10129926.0 G227_M09_primary_unique 46.6465 24.1082 179 193.560874 G227_M09_sorted 44.52773889957341 4510627 G227_M09_statistics_for_all_accepted_reads 24707872 24707872 G227_M09_statistics_for_primary_reads 21801820 21801820 G227_M09_statistics_for_primary_unique_reads 20259852 20259852 G227_M10_CKDL240023967-1A_22NF25LT3_L5_1 27.241 0.952145 4907733930.0 0.557753 98.21014449270059 58.13761703556655 61.982055683557846 56.0 150.0 18.181818181818183 21130756.0 G227_M10_CKDL240023967-1A_22NF25LT3_L5_2 61.46874772337225 55.0 150.0 18.181818181818183 21130756.0 G227_M10_G227_M10 36.56 7725713.0 G227_M10_primary_unique 42.032599999999995 19.6627 161 177.483651 G227_M10_sorted 46.590275874861 3599431 G227_M10_statistics_for_all_accepted_reads 20205914 20205914 G227_M10_statistics_for_primary_reads 16916554 16916554 G227_M10_statistics_for_primary_unique_reads 15451426 15451426 G227_M11_CKDL240023967-1A_22NF25LT3_L5_1 27.721899999999998 0.930826 4158957278.0 0.594888 98.38538391369681 53.58314944357239 62.499680919662495 58.0 150.0 45.45454545454545 18493870.0 G227_M11_CKDL240023967-1A_22NF25LT3_L5_2 61.56962987296893 59.0 150.0 45.45454545454545 18493870.0 G227_M11_G227_M11 35.14 6499267.0 G227_M11_primary_unique 33.884 20.4873 168 188.101232 G227_M11_sorted 54.71964761564651 3556376 G227_M11_statistics_for_all_accepted_reads 15856578 15856578 G227_M11_statistics_for_primary_reads 13927870 13927870 G227_M11_statistics_for_primary_unique_reads 12998534 12998534 G227_M12_CKDL240023967-1A_22NF25LT3_L5_1 36.2767 0.960538 5175191290.0 0.575795 98.76910818656638 52.800858201584624 68.35615716444174 57.0 150.0 27.27272727272727 21024431.0 G227_M12_CKDL240023967-1A_22NF25LT3_L5_2 67.82137633303111 57.0 150.0 36.36363636363637 21024431.0 G227_M12_G227_M12 47.97 10084924.0 G227_M12_primary_unique 40.4123 20.6102 162 178.436333 G227_M12_sorted 56.039976106909684 5651589 G227_M12_statistics_for_all_accepted_reads 24514982 24514982 G227_M12_statistics_for_primary_reads 21629326 21629326 G227_M12_statistics_for_primary_unique_reads 20169848 20169848 G227_M13_CKDL240023967-1A_22NF25LT3_L5_1 17.4257 0.954935 5155453664.0 0.527749 98.47386492004814 70.44604469236181 47.955158326253354 54.0 150.0 18.181818181818183 24689230.0 G227_M13_CKDL240023967-1A_22NF25LT3_L5_2 47.50634752700432 53.0 150.0 18.181818181818183 24689230.0 G227_M13_G227_M13 30.6 7554550.0 G227_M13_primary_unique 25.844 20.048099999999998 159 177.88049699999996 G227_M13_sorted 53.38335175490268 4032872 G227_M13_statistics_for_all_accepted_reads 19082272 19082272 G227_M13_statistics_for_primary_reads 16313096 16313096 G227_M13_statistics_for_primary_unique_reads 15109100 15109100 G227_M14_CKDL240023967-1A_22NF25LT3_L5_1 26.433400000000002 0.953062 4866611826.0 0.548522 98.09500484272002 54.09051354664669 55.248971103786246 54.0 150.0 18.181818181818183 19970182.0 G227_M14_CKDL240023967-1A_22NF25LT3_L5_2 55.04381890595487 54.0 150.0 36.36363636363637 19970182.0 G227_M14_G227_M14 44.79 8944570.0 G227_M14_primary_unique 30.396 15.628800000000002 159 180.473981 G227_M14_sorted 46.06714464753476 4120508 G227_M14_statistics_for_all_accepted_reads 22282394 22282394 G227_M14_statistics_for_primary_reads 19263908 19263908 G227_M14_statistics_for_primary_unique_reads 17889140 17889140 G227_M15_CKDL240023967-1A_22NF25LT3_L5_1 18.212400000000002 0.958483 6183786920.0 0.511436 98.36700001025109 65.12896820383574 50.09825954548171 51.0 150.0 18.181818181818183 27704348.0 G227_M15_CKDL240023967-1A_22NF25LT3_L5_2 48.63850692914734 51.0 150.0 9.090909090909092 27704348.0 G227_M15_G227_M15 35.72 9895025.0 G227_M15_primary_unique 27.0341 16.2934 163 181.950513 G227_M15_sorted 56.07628075724922 5548762 G227_M15_statistics_for_all_accepted_reads 24963244 24963244 G227_M15_statistics_for_primary_reads 21354108 21354108 G227_M15_statistics_for_primary_unique_reads 19790050 19790050 G227_M16_CKDL240023967-1A_22NF25LT3_L5_1 35.525400000000005 0.954604 4857690615.0 0.576349 98.39970721814258 47.80098233631224 64.76726292502121 57.0 150.0 27.27272727272727 19405574.0 G227_M16_CKDL240023967-1A_22NF25LT3_L5_2 65.0991716555936 57.0 150.0 36.36363636363637 19405574.0 G227_M16_G227_M16 49.47 9600503.0 G227_M16_primary_unique 34.8692 26.0452 164 180.735377 G227_M16_sorted 51.29018760787846 4924116 G227_M16_statistics_for_all_accepted_reads 23118314 23118314 G227_M16_statistics_for_primary_reads 20521952 20521952 G227_M16_statistics_for_primary_unique_reads 19201006 19201006 G227_M17_CKDL240023967-1A_22NF25LT3_L5_1 20.150299999999998 0.947851 6254973273.0 0.524337 98.29163784161621 63.88076909582752 50.70797151181644 53.0 150.0 18.181818181818183 27789775.0 G227_M17_CKDL240023967-1A_22NF25LT3_L5_2 50.33334077827901 53.0 150.0 45.45454545454545 27789775.0 G227_M17_G227_M17 35.64 9905375.0 G227_M17_primary_unique 24.5212 18.3007 154 170.709561 G227_M17_sorted 44.653251391290084 4423072 G227_M17_statistics_for_all_accepted_reads 26156458 26156458 G227_M17_statistics_for_primary_reads 21701468 21701468 G227_M17_statistics_for_primary_unique_reads 19810750 19810750 G227_M18_CKDL240023967-1A_22NF25LT3_L5_1 24.5689 0.951874 5819188362.0 0.502918 98.2105385609943 49.613115703709695 51.4656741529027 50.0 150.0 18.181818181818183 23906243.0 G227_M18_CKDL240023967-1A_22NF25LT3_L5_2 51.46326455230257 50.0 150.0 36.36363636363637 23906243.0 G227_M18_G227_M18 45.33 10835875.0 G227_M18_primary_unique 28.440700000000003 12.008099999999999 165 188.413186 G227_M18_sorted 41.655353167141556 4513722 G227_M18_statistics_for_all_accepted_reads 27997458 27997458 G227_M18_statistics_for_primary_reads 23670086 23670086 G227_M18_statistics_for_primary_unique_reads 21671750 21671750 G227_M19_CKDL240023967-1A_22NF25LT3_L5_1 23.1189 0.95669 6464972611.0 0.54325 98.38972181905416 64.74359491923394 56.44560489266803 54.0 150.0 27.27272727272727 29229608.0 G227_M19_CKDL240023967-1A_22NF25LT3_L5_2 55.46733840774724 54.0 150.0 27.27272727272727 29229608.0 G227_M19_G227_M19 35.04 10241358.0 G227_M19_primary_unique 32.4546 18.7511 161 178.753888 G227_M19_sorted 50.54784726791115 5176786 G227_M19_statistics_for_all_accepted_reads 25609324 25609324 G227_M19_statistics_for_primary_reads 22094006 22094006 G227_M19_statistics_for_primary_unique_reads 20482716 20482716 G227_M20_CKDL240023967-1A_22NF25LT3_L5_1 16.426 0.956078 5733887250.0 0.492612 98.37040314766587 56.427094229211626 41.397391468577105 50.0 150.0 9.090909090909092 24655730.0 G227_M20_CKDL240023967-1A_22NF25LT3_L5_2 40.42275411575831 50.0 150.0 9.090909090909092 24655730.0 G227_M20_G227_M20 41.76 10297053.0 G227_M20_primary_unique 17.1059 10.940800000000001 171 191.753035 G227_M20_sorted 48.85216187582991 5030333 G227_M20_statistics_for_all_accepted_reads 26396364 26396364 G227_M20_statistics_for_primary_reads 22315644 22315644 G227_M20_statistics_for_primary_unique_reads 20594106 20594106 G227_M21_CKDL240023967-1A_22NF25LT3_L5_1 20.000799999999998 0.947065 5937953706.0 0.50874 98.41301710875878 63.5456180097987 50.86031408619206 52.0 150.0 36.36363636363637 26183080.0 G227_M21_CKDL240023967-1A_22NF25LT3_L5_2 49.88985207079843 51.0 150.0 18.181818181818183 26183080.0 G227_M21_G227_M21 36.18 9473262.0 G227_M21_primary_unique 27.5359 15.2405 156 174.26338 G227_M21_sorted 47.205640464710044 4471914 G227_M21_statistics_for_all_accepted_reads 25769392 25769392 G227_M21_statistics_for_primary_reads 20967376 20967376 G227_M21_statistics_for_primary_unique_reads 18946524 18946524 G227_M22_CKDL240023967-1A_22NF25LT3_L5_1 18.116 0.949696 5484237310.0 0.508187 98.54977617070041 60.74267649299626 46.815107952762936 52.0 150.0 18.181818181818183 24648471.0 G227_M22_CKDL240023967-1A_22NF25LT3_L5_2 45.50286460274051 51.0 150.0 27.27272727272727 24648471.0 G227_M22_G227_M22 38.53 9498272.0 G227_M22_primary_unique 23.4407 15.599599999999999 170 192.204089 G227_M22_sorted 59.170015345949245 5620129 G227_M22_statistics_for_all_accepted_reads 23689528 23689528 G227_M22_statistics_for_primary_reads 20438184 20438184 G227_M22_statistics_for_primary_unique_reads 18996544 18996544 G227_M23_CKDL240023967-1A_22NF25LT3_L5_1 19.334799999999998 0.941009 5619858953.0 0.551473 98.28476413345312 72.681234468139 57.89792698805317 55.0 150.0 27.27272727272727 28336511.0 G227_M23_CKDL240023967-1A_22NF25LT3_L5_2 57.41686010879079 55.0 150.0 36.36363636363637 28336511.0 G227_M23_G227_M23 22.91 6492057.0 G227_M23_primary_unique 41.2203 20.2213 150 168.178594 G227_M23_sorted 36.40159043582026 2363212 G227_M23_statistics_for_all_accepted_reads 17612288 17612288 G227_M23_statistics_for_primary_reads 14402482 14402482 G227_M23_statistics_for_primary_unique_reads 12984114 12984114 G227_M24_CKDL240023967-1A_22NF25LT3_L5_1 6.0378 0.946065 5115090560.0 0.472203 98.36394096305095 82.81812538379648 41.339406547959534 53.0 150.0 27.27272727272727 29833520.0 G227_M24_CKDL240023967-1A_22NF25LT3_L5_2 40.060036003177444 50.0 150.0 36.36363636363637 29833520.0 G227_M24_G227_M24 14.07 4198738.0 G227_M24_primary_unique 11.495099999999999 8.7329 154 175.445032 G227_M24_sorted 66.23761711257049 2781144 G227_M24_statistics_for_all_accepted_reads 12017972 12017972 G227_M24_statistics_for_primary_reads 9407854 9407854 G227_M24_statistics_for_primary_unique_reads 8397476 8397476 G227_M25_CKDL240023967-1A_22NF25LT3_L5_1 10.8832 0.945739 6147983452.0 0.436232 98.04216281771345 50.41382798646493 41.15761100691453 44.0 150.0 27.27272727272727 26227564.0 G227_M25_CKDL240023967-1A_22NF25LT3_L5_2 41.004207197544616 45.0 150.0 27.27272727272727 26227564.0 G227_M25_G227_M25 34.18 8965693.0 G227_M25_primary_unique 4.4539 4.352 180 211.086561 G227_M25_sorted 57.926944409093636 5193552 G227_M25_statistics_for_all_accepted_reads 26309396 26309396 G227_M25_statistics_for_primary_reads 20285244 20285244 G227_M25_statistics_for_primary_unique_reads 17931386 17931386 G227_M26_CKDL240023967-1A_22NF25LT3_L5_1 10.7274 0.938527 4441060649.0 0.484182 97.45064487777088 73.58451619333445 48.036192797082236 51.0 150.0 27.27272727272727 22313996.0 G227_M26_CKDL240023967-1A_22NF25LT3_L5_2 49.632035563859446 49.0 150.0 27.27272727272727 22313996.0 G227_M26_G227_M26 21.14 4718007.0 G227_M26_primary_unique 26.648 10.0712 149 173.155633 G227_M26_sorted 58.427997245447074 2756637 G227_M26_statistics_for_all_accepted_reads 14291984 14291984 G227_M26_statistics_for_primary_reads 10844866 10844866 G227_M26_statistics_for_primary_unique_reads 9436014 9436014 G227_M27_CKDL240023967-1A_22NF25LT3_L5_1 18.0499 0.948811 5591528587.0 0.508062 98.40501983600399 61.783250866675424 44.68795371013214 52.0 150.0 18.181818181818183 24951094.0 G227_M27_CKDL240023967-1A_22NF25LT3_L5_2 43.867284104599115 51.0 150.0 18.181818181818183 24951094.0 G227_M27_G227_M27 39.09 9754263.0 G227_M27_primary_unique 23.9541 13.1362 161 183.550766 G227_M27_sorted 47.942832790134936 4676470 G227_M27_statistics_for_all_accepted_reads 25193402 25193402 G227_M27_statistics_for_primary_reads 21206608 21206608 G227_M27_statistics_for_primary_unique_reads 19508526 19508526 G227_M28_CKDL240023967-1A_22NF25LT3_L5_1 6.53605 0.944565 4929174380.0 0.48221 97.9549212667554 79.02712964598196 36.48182019196581 52.0 150.0 18.181818181818183 27507694.0 G227_M28_CKDL240023967-1A_22NF25LT3_L5_2 36.66705622423025 50.0 150.0 18.181818181818183 27507694.0 G227_M28_G227_M28 19.76 5434558.0 G227_M28_primary_unique 10.566 8.9804 160 184.462016 G227_M28_sorted 48.1328748354512 2615809 G227_M28_statistics_for_all_accepted_reads 14354212 14354212 G227_M28_statistics_for_primary_reads 11852022 11852022 G227_M28_statistics_for_primary_unique_reads 10869116 10869116 G227_M29_CKDL240023967-1A_22NF25LT3_L5_1 16.8225 0.957835 5896895401.0 0.472968 98.44026002449444 51.52679964539043 39.03174535238752 48.0 150.0 9.090909090909092 24275713.0 G227_M29_CKDL240023967-1A_22NF25LT3_L5_2 37.912503215809934 48.0 150.0 18.181818181818183 24275713.0 G227_M29_G227_M29 49.0 11895619.0 G227_M29_primary_unique 13.8402 11.6112 174 194.715045 G227_M29_sorted 58.741869590813224 6987709 G227_M29_statistics_for_all_accepted_reads 30098572 30098572 G227_M29_statistics_for_primary_reads 25651748 25651748 G227_M29_statistics_for_primary_unique_reads 23791238 23791238 G227_M30_CKDL240023967-1A_22NF25LT3_L5_1 4.80784 0.946649 4691475375.0 0.443348 98.23627117834164 87.45489287350777 47.19979347717357 52.0 150.0 27.27272727272727 28126376.0 G227_M30_CKDL240023967-1A_22NF25LT3_L5_2 46.02658941368465 48.0 150.0 27.27272727272727 28126376.0 G227_M30_G227_M30 8.66 2435255.0 G227_M30_primary_unique 3.6394999999999995 3.2966 136 155.427565 G227_M30_sorted 54.281214903572724 1321886 G227_M30_statistics_for_all_accepted_reads 8856260 8856260 G227_M30_statistics_for_primary_reads 5946176 5946176 G227_M30_statistics_for_primary_unique_reads 4870510 4870510