Sample total_passed total_failed secondary_passed secondary_failed supplementary_passed supplementary_failed duplicates_passed duplicates_failed mapped_passed mapped_failed mapped_passed_pct mapped_failed_pct paired in sequencing_passed paired in sequencing_failed read1_passed read1_failed read2_passed read2_failed properly paired_passed properly paired_failed properly paired_passed_pct properly paired_failed_pct with itself and mate mapped_passed with itself and mate mapped_failed singletons_passed singletons_failed singletons_passed_pct singletons_failed_pct with mate mapped to a different chr_passed with mate mapped to a different chr_failed with mate mapped to a different chr (mapQ >= 5)_passed with mate mapped to a different chr (mapQ >= 5)_failed flagstat_total G237_M01_statistics_for_all_accepted_reads 72947440 0 9043386 0 0 0 0 0 72947440 0 100.0 nan 63904054 0 31952027 0 31952027 0 63904054 0 100.0 nan 63904054 0 0 0 0.0 nan 0 0 0 0 72947440 G237_M01_statistics_for_primary_reads 63904054 0 0 0 0 0 0 0 63904054 0 100.0 nan 63904054 0 31952027 0 31952027 0 63904054 0 100.0 nan 63904054 0 0 0 0.0 nan 0 0 0 0 63904054 G237_M01_statistics_for_primary_unique_reads 59542416 0 0 0 0 0 0 0 59542416 0 100.0 nan 59542416 0 29771208 0 29771208 0 59542416 0 100.0 nan 59542416 0 0 0 0.0 nan 0 0 0 0 59542416 G237_M01a_statistics_for_all_accepted_reads 72947440 0 9043386 0 0 0 0 0 72947440 0 100.0 nan 63904054 0 31952027 0 31952027 0 63904054 0 100.0 nan 63904054 0 0 0 0.0 nan 0 0 0 0 72947440 G237_M01a_statistics_for_primary_reads 63904054 0 0 0 0 0 0 0 63904054 0 100.0 nan 63904054 0 31952027 0 31952027 0 63904054 0 100.0 nan 63904054 0 0 0 0.0 nan 0 0 0 0 63904054 G237_M01a_statistics_for_primary_unique_reads 59542416 0 0 0 0 0 0 0 59542416 0 100.0 nan 59542416 0 29771208 0 29771208 0 59542416 0 100.0 nan 59542416 0 0 0 0.0 nan 0 0 0 0 59542416 G237_M02_statistics_for_all_accepted_reads 50877938 0 6551202 0 0 0 0 0 50877938 0 100.0 nan 44326736 0 22163368 0 22163368 0 44326736 0 100.0 nan 44326736 0 0 0 0.0 nan 0 0 0 0 50877938 G237_M02_statistics_for_primary_reads 44326736 0 0 0 0 0 0 0 44326736 0 100.0 nan 44326736 0 22163368 0 22163368 0 44326736 0 100.0 nan 44326736 0 0 0 0.0 nan 0 0 0 0 44326736 G237_M02_statistics_for_primary_unique_reads 41224960 0 0 0 0 0 0 0 41224960 0 100.0 nan 41224960 0 20612480 0 20612480 0 41224960 0 100.0 nan 41224960 0 0 0 0.0 nan 0 0 0 0 41224960 G237_M02a_statistics_for_all_accepted_reads 50877938 0 6551202 0 0 0 0 0 50877938 0 100.0 nan 44326736 0 22163368 0 22163368 0 44326736 0 100.0 nan 44326736 0 0 0 0.0 nan 0 0 0 0 50877938 G237_M02a_statistics_for_primary_reads 44326736 0 0 0 0 0 0 0 44326736 0 100.0 nan 44326736 0 22163368 0 22163368 0 44326736 0 100.0 nan 44326736 0 0 0 0.0 nan 0 0 0 0 44326736 G237_M02a_statistics_for_primary_unique_reads 41224960 0 0 0 0 0 0 0 41224960 0 100.0 nan 41224960 0 20612480 0 20612480 0 41224960 0 100.0 nan 41224960 0 0 0 0.0 nan 0 0 0 0 41224960 G237_M03_statistics_for_all_accepted_reads 67918278 0 5416824 0 0 0 0 0 67918278 0 100.0 nan 62501454 0 31250727 0 31250727 0 62501454 0 100.0 nan 62501454 0 0 0 0.0 nan 0 0 0 0 67918278 G237_M03_statistics_for_primary_reads 62501454 0 0 0 0 0 0 0 62501454 0 100.0 nan 62501454 0 31250727 0 31250727 0 62501454 0 100.0 nan 62501454 0 0 0 0.0 nan 0 0 0 0 62501454 G237_M03_statistics_for_primary_unique_reads 59396950 0 0 0 0 0 0 0 59396950 0 100.0 nan 59396950 0 29698475 0 29698475 0 59396950 0 100.0 nan 59396950 0 0 0 0.0 nan 0 0 0 0 59396950 G237_M03a_statistics_for_all_accepted_reads 67918278 0 5416824 0 0 0 0 0 67918278 0 100.0 nan 62501454 0 31250727 0 31250727 0 62501454 0 100.0 nan 62501454 0 0 0 0.0 nan 0 0 0 0 67918278 G237_M03a_statistics_for_primary_reads 62501454 0 0 0 0 0 0 0 62501454 0 100.0 nan 62501454 0 31250727 0 31250727 0 62501454 0 100.0 nan 62501454 0 0 0 0.0 nan 0 0 0 0 62501454 G237_M03a_statistics_for_primary_unique_reads 59396950 0 0 0 0 0 0 0 59396950 0 100.0 nan 59396950 0 29698475 0 29698475 0 59396950 0 100.0 nan 59396950 0 0 0 0.0 nan 0 0 0 0 59396950 G237_M04_statistics_for_all_accepted_reads 52151772 0 4381492 0 0 0 0 0 52151772 0 100.0 nan 47770280 0 23885140 0 23885140 0 47770280 0 100.0 nan 47770280 0 0 0 0.0 nan 0 0 0 0 52151772 G237_M04_statistics_for_primary_reads 47770280 0 0 0 0 0 0 0 47770280 0 100.0 nan 47770280 0 23885140 0 23885140 0 47770280 0 100.0 nan 47770280 0 0 0 0.0 nan 0 0 0 0 47770280 G237_M04_statistics_for_primary_unique_reads 45263278 0 0 0 0 0 0 0 45263278 0 100.0 nan 45263278 0 22631639 0 22631639 0 45263278 0 100.0 nan 45263278 0 0 0 0.0 nan 0 0 0 0 45263278 G237_M04a_statistics_for_all_accepted_reads 52151772 0 4381492 0 0 0 0 0 52151772 0 100.0 nan 47770280 0 23885140 0 23885140 0 47770280 0 100.0 nan 47770280 0 0 0 0.0 nan 0 0 0 0 52151772 G237_M04a_statistics_for_primary_reads 47770280 0 0 0 0 0 0 0 47770280 0 100.0 nan 47770280 0 23885140 0 23885140 0 47770280 0 100.0 nan 47770280 0 0 0 0.0 nan 0 0 0 0 47770280 G237_M04a_statistics_for_primary_unique_reads 45263278 0 0 0 0 0 0 0 45263278 0 100.0 nan 45263278 0 22631639 0 22631639 0 45263278 0 100.0 nan 45263278 0 0 0 0.0 nan 0 0 0 0 45263278