[2024-12-20 09:29:19,124] multiqc [DEBUG ] This is MultiQC v1.11 [2024-12-20 09:29:19,125] multiqc [DEBUG ] No MultiQC config found: /projectnb/wax-es/routines/condaenv/multiqc/lib/python3.9/site-packages/multiqc_config.yaml [2024-12-20 09:29:19,125] multiqc [DEBUG ] No MultiQC config found: /usr2/collab/mpyatkov/.multiqc_config.yaml [2024-12-20 09:29:19,125] multiqc [DEBUG ] No MultiQC config found: multiqc_config.yaml [2024-12-20 09:29:19,128] multiqc [DEBUG ] Loading config settings from: /projectnb/wax-dk/max/G240_RNASEQ/Scripts/99_final_summary/Scripts/multiqc_config.yaml [2024-12-20 09:29:19,128] multiqc [DEBUG ] New config 'table_columns_visible': {'FastQC': {'percent_duplicates': False}} [2024-12-20 09:29:19,128] multiqc [DEBUG ] New config 'remove_sections': ['fastqc_sequence_counts'] [2024-12-20 09:29:19,128] multiqc [DEBUG ] Command used: /projectnb/wax-es/routines/condaenv/multiqc/bin/multiqc --no-ansi -c /projectnb/wax-dk/max/G240_RNASEQ/Scripts/99_final_summary/Scripts/multiqc_config.yaml /projectnb/wax-dk/max/G240_RNASEQ/SAMPLES /projectnb/wax-dk/max/G240_RNASEQ/Scripts/03_FASTQC/ /projectnb/wax-dk/max/G240_RNASEQ/Scripts/06_CollectMetrics/ [2024-12-20 09:29:19,684] multiqc [WARNING] MultiQC Version v1.25.2 now available! [2024-12-20 09:29:19,684] multiqc [DEBUG ] Command : /projectnb/wax-es/routines/condaenv/multiqc/bin/multiqc --no-ansi -c /projectnb/wax-dk/max/G240_RNASEQ/Scripts/99_final_summary/Scripts/multiqc_config.yaml /projectnb/wax-dk/max/G240_RNASEQ/SAMPLES /projectnb/wax-dk/max/G240_RNASEQ/Scripts/03_FASTQC/ /projectnb/wax-dk/max/G240_RNASEQ/Scripts/06_CollectMetrics/ [2024-12-20 09:29:19,684] multiqc [DEBUG ] Working dir : /projectnb/wax-dk/max/G240_RNASEQ/Scripts/99_final_summary/G240_RNASEQ_multiqc_report [2024-12-20 09:29:19,684] multiqc [DEBUG ] Template : default [2024-12-20 09:29:19,684] multiqc [DEBUG ] Running Python 3.9.6 | packaged by conda-forge | (default, Jul 11 2021, 03:39:48) [GCC 9.3.0] [2024-12-20 09:29:19,685] multiqc [DEBUG ] Analysing modules: custom_content, ccs, ngsderive, purple, conpair, lima, peddy, somalier, methylQA, mosdepth, phantompeakqualtools, qualimap, preseq, quast, qorts, rna_seqc, rockhopper, rsem, rseqc, busco, bustools, goleft_indexcov, gffcompare, disambiguate, supernova, deeptools, sargasso, verifybamid, mirtrace, happy, mirtop, sambamba, homer, hops, macs2, theta2, snpeff, gatk, htseq, bcftools, featureCounts, fgbio, dragen, dedup, damageprofiler, biobambam2, jcvi, mtnucratio, picard, vep, sentieon, prokka, qc3C, nanostat, samblaster, samtools, sexdeterrmine, eigenstratdatabasetools, bamtools, jellyfish, vcftools, longranger, stacks, varscan2, snippy, bbmap, bismark, biscuit, hicexplorer, hicup, hicpro, salmon, kallisto, slamdunk, star, hisat2, tophat, bowtie2, bowtie1, snpsplit, odgi, pangolin, kat, leehom, adapterRemoval, clipandmerge, cutadapt, flexbar, kaiju, kraken, malt, trimmomatic, sickle, skewer, sortmerna, biobloomtools, fastq_screen, afterqc, fastp, fastqc, pychopper, pycoqc, minionqc, multivcfanalyzer, clusterflow, bcl2fastq, bclconvert, interop, ivar, flash, seqyclean, optitype [2024-12-20 09:29:19,686] multiqc [DEBUG ] Using temporary directory for creating report: /scratch/tmp7fi3sqfb [2024-12-20 09:29:20,051] multiqc [INFO ] Search path : /projectnb/wax-dk/max/G240_RNASEQ/SAMPLES [2024-12-20 09:29:20,051] multiqc [INFO ] Search path : /projectnb/wax-dk/max/G240_RNASEQ/Scripts/03_FASTQC [2024-12-20 09:29:20,051] multiqc [INFO ] Search path : /projectnb/wax-dk/max/G240_RNASEQ/Scripts/06_CollectMetrics [2024-12-20 09:29:20,834] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G240_M35_CKDL240041412-1A_22TG7VLT3_L4_2.fq.gz [2024-12-20 09:29:20,835] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G240_M35_CKDL240041412-1A_22TG7VLT3_L4_1.fq.gz [2024-12-20 09:29:20,968] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G240_M35_SJ.out.tab [2024-12-20 09:29:20,971] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G240_M35_SJ.out.tab [2024-12-20 09:29:20,972] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G240_M35_SJ.out.tab [2024-12-20 09:29:20,972] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G240_M35_SJ.out.tab [2024-12-20 09:29:20,977] multiqc [DEBUG ] File ignored by vep/vep_html because it exceeded search pattern filesize limit: G240_M35_SJ.out.tab [2024-12-20 09:29:20,977] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G240_M35_SJ.out.tab [2024-12-20 09:29:20,977] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G240_M35_SJ.out.tab [2024-12-20 09:29:20,977] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: G240_M35_SJ.out.tab [2024-12-20 09:29:20,977] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: G240_M35_SJ.out.tab [2024-12-20 09:29:20,977] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: G240_M35_SJ.out.tab [2024-12-20 09:29:20,977] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: G240_M35_SJ.out.tab [2024-12-20 09:29:20,977] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: G240_M35_SJ.out.tab [2024-12-20 09:29:20,977] multiqc [DEBUG ] File ignored by snpeff because it exceeded search pattern filesize limit: G240_M35_SJ.out.tab [2024-12-20 09:29:20,977] multiqc [DEBUG ] File ignored by stacks/sumstats because it exceeded search pattern filesize limit: G240_M35_SJ.out.tab [2024-12-20 09:29:23,016] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G240_M35_primary_unique.bam.bai [2024-12-20 09:29:23,017] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G240_M35_primary_unique.bam [2024-12-20 09:29:23,038] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G240_M35_marked_dup_metrics.txt [2024-12-20 09:29:23,039] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G240_M35_marked_dup_metrics.txt [2024-12-20 09:29:23,040] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G240_M35_marked_dup_metrics.txt [2024-12-20 09:29:23,040] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G240_M35_marked_dup_metrics.txt [2024-12-20 09:29:23,043] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G240_M35_marked_dup_metrics.txt [2024-12-20 09:29:23,054] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G240_M35_hist.pdf [2024-12-20 09:29:23,065] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G240_M35_metrics [2024-12-20 09:29:23,067] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G240_M35_metrics [2024-12-20 09:29:23,067] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G240_M35_metrics [2024-12-20 09:29:23,067] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G240_M35_metrics [2024-12-20 09:29:23,070] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G240_M35_metrics [2024-12-20 09:29:23,182] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G240_M35_featureCounts.out [2024-12-20 09:29:23,185] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G240_M35_featureCounts.out [2024-12-20 09:29:23,185] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G240_M35_featureCounts.out [2024-12-20 09:29:23,185] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G240_M35_featureCounts.out [2024-12-20 09:29:23,189] multiqc [DEBUG ] File ignored by vep/vep_html because it exceeded search pattern filesize limit: G240_M35_featureCounts.out [2024-12-20 09:29:23,190] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G240_M35_featureCounts.out [2024-12-20 09:29:23,190] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G240_M35_featureCounts.out [2024-12-20 09:29:23,190] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: G240_M35_featureCounts.out [2024-12-20 09:29:23,190] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: G240_M35_featureCounts.out [2024-12-20 09:29:23,190] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: G240_M35_featureCounts.out [2024-12-20 09:29:23,190] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: G240_M35_featureCounts.out [2024-12-20 09:29:23,190] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: G240_M35_featureCounts.out [2024-12-20 09:29:23,211] multiqc [DEBUG ] File ignored by stacks/sumstats because it exceeded search pattern filesize limit: G240_M35_featureCounts.out [2024-12-20 09:29:24,110] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G240_M35_featureCounts.out [2024-12-20 09:29:24,113] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G240_M35_featureCounts.out [2024-12-20 09:29:24,127] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G240_M35_featureCounts.out [2024-12-20 09:29:24,127] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G240_M35_featureCounts.out [2024-12-20 09:29:24,132] multiqc [DEBUG ] File ignored by vep/vep_html because it exceeded search pattern filesize limit: G240_M35_featureCounts.out [2024-12-20 09:29:24,132] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G240_M35_featureCounts.out [2024-12-20 09:29:24,132] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G240_M35_featureCounts.out [2024-12-20 09:29:24,132] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: G240_M35_featureCounts.out [2024-12-20 09:29:24,132] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: G240_M35_featureCounts.out [2024-12-20 09:29:24,132] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: G240_M35_featureCounts.out [2024-12-20 09:29:24,132] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: G240_M35_featureCounts.out [2024-12-20 09:29:24,133] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: G240_M35_featureCounts.out [2024-12-20 09:29:24,156] multiqc [DEBUG ] File ignored by stacks/sumstats because it exceeded search pattern filesize limit: G240_M35_featureCounts.out [2024-12-20 09:29:25,040] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G240_M35_metrics [2024-12-20 09:29:25,043] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G240_M35_metrics [2024-12-20 09:29:25,049] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G240_M35_metrics [2024-12-20 09:29:25,078] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G240_M32_CKDL240041412-1A_22TG7VLT3_L4_2.fq.gz [2024-12-20 09:29:25,078] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G240_M32_CKDL240041412-1A_22TG7VLT3_L4_1.fq.gz [2024-12-20 09:29:25,121] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G240_M32_SJ.out.tab [2024-12-20 09:29:25,124] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G240_M32_SJ.out.tab [2024-12-20 09:29:25,124] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G240_M32_SJ.out.tab [2024-12-20 09:29:25,124] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G240_M32_SJ.out.tab [2024-12-20 09:29:25,129] multiqc [DEBUG ] File ignored by vep/vep_html because it exceeded search pattern filesize limit: G240_M32_SJ.out.tab [2024-12-20 09:29:25,129] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G240_M32_SJ.out.tab [2024-12-20 09:29:25,129] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G240_M32_SJ.out.tab [2024-12-20 09:29:25,129] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: G240_M32_SJ.out.tab [2024-12-20 09:29:25,129] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: G240_M32_SJ.out.tab [2024-12-20 09:29:25,129] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: G240_M32_SJ.out.tab [2024-12-20 09:29:25,129] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: G240_M32_SJ.out.tab [2024-12-20 09:29:25,129] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: G240_M32_SJ.out.tab [2024-12-20 09:29:25,129] multiqc [DEBUG ] File ignored by snpeff because it exceeded search pattern filesize limit: G240_M32_SJ.out.tab [2024-12-20 09:29:25,129] multiqc [DEBUG ] File ignored by stacks/sumstats because it exceeded search pattern filesize limit: G240_M32_SJ.out.tab [2024-12-20 09:29:27,410] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G240_M32_primary_unique.bam [2024-12-20 09:29:27,426] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G240_M32_primary_unique.bam.bai [2024-12-20 09:29:27,475] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G240_M32_marked_dup_metrics.txt [2024-12-20 09:29:27,476] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G240_M32_marked_dup_metrics.txt [2024-12-20 09:29:27,477] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G240_M32_marked_dup_metrics.txt [2024-12-20 09:29:27,477] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G240_M32_marked_dup_metrics.txt [2024-12-20 09:29:27,481] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G240_M32_marked_dup_metrics.txt [2024-12-20 09:29:27,494] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G240_M32_hist.pdf [2024-12-20 09:29:27,514] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G240_M32_metrics [2024-12-20 09:29:27,517] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G240_M32_metrics [2024-12-20 09:29:27,517] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G240_M32_metrics [2024-12-20 09:29:27,517] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G240_M32_metrics [2024-12-20 09:29:27,522] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G240_M32_metrics [2024-12-20 09:29:27,617] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G240_M32_featureCounts.out [2024-12-20 09:29:27,620] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G240_M32_featureCounts.out [2024-12-20 09:29:27,620] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G240_M32_featureCounts.out [2024-12-20 09:29:27,620] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G240_M32_featureCounts.out [2024-12-20 09:29:27,625] multiqc [DEBUG ] File ignored by vep/vep_html because it exceeded search pattern filesize limit: G240_M32_featureCounts.out [2024-12-20 09:29:27,625] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G240_M32_featureCounts.out [2024-12-20 09:29:27,625] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G240_M32_featureCounts.out [2024-12-20 09:29:27,625] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: G240_M32_featureCounts.out [2024-12-20 09:29:27,625] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: G240_M32_featureCounts.out [2024-12-20 09:29:27,625] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: G240_M32_featureCounts.out [2024-12-20 09:29:27,625] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: G240_M32_featureCounts.out [2024-12-20 09:29:27,625] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: G240_M32_featureCounts.out [2024-12-20 09:29:27,647] multiqc [DEBUG ] File ignored by stacks/sumstats because it exceeded search pattern filesize limit: G240_M32_featureCounts.out [2024-12-20 09:29:28,524] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G240_M32_featureCounts.out [2024-12-20 09:29:28,527] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G240_M32_featureCounts.out [2024-12-20 09:29:28,527] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G240_M32_featureCounts.out [2024-12-20 09:29:28,527] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G240_M32_featureCounts.out [2024-12-20 09:29:28,532] multiqc [DEBUG ] File ignored by vep/vep_html because it exceeded search pattern filesize limit: G240_M32_featureCounts.out [2024-12-20 09:29:28,532] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G240_M32_featureCounts.out [2024-12-20 09:29:28,532] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G240_M32_featureCounts.out [2024-12-20 09:29:28,532] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: G240_M32_featureCounts.out [2024-12-20 09:29:28,532] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: G240_M32_featureCounts.out [2024-12-20 09:29:28,532] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: G240_M32_featureCounts.out [2024-12-20 09:29:28,532] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: G240_M32_featureCounts.out [2024-12-20 09:29:28,532] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: G240_M32_featureCounts.out [2024-12-20 09:29:28,553] multiqc [DEBUG ] File ignored by stacks/sumstats because it exceeded search pattern filesize limit: G240_M32_featureCounts.out [2024-12-20 09:29:29,432] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G240_M32_metrics [2024-12-20 09:29:29,435] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G240_M32_metrics [2024-12-20 09:29:29,447] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G240_M32_metrics [2024-12-20 09:29:29,481] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G240_M23_CKDL240041412-1A_22TG7VLT3_L4_1.fq.gz [2024-12-20 09:29:29,481] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G240_M23_CKDL240041412-1A_22TG7VLT3_L4_2.fq.gz [2024-12-20 09:29:29,495] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G240_M23_primary_unique.bam [2024-12-20 09:29:29,574] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G240_M23_SJ.out.tab [2024-12-20 09:29:29,577] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G240_M23_SJ.out.tab [2024-12-20 09:29:29,577] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G240_M23_SJ.out.tab [2024-12-20 09:29:29,577] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G240_M23_SJ.out.tab [2024-12-20 09:29:29,581] multiqc [DEBUG ] File ignored by vep/vep_html because it exceeded search pattern filesize limit: G240_M23_SJ.out.tab [2024-12-20 09:29:29,581] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G240_M23_SJ.out.tab [2024-12-20 09:29:29,582] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G240_M23_SJ.out.tab [2024-12-20 09:29:29,582] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: G240_M23_SJ.out.tab [2024-12-20 09:29:29,582] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: G240_M23_SJ.out.tab [2024-12-20 09:29:29,582] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: G240_M23_SJ.out.tab [2024-12-20 09:29:29,582] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: G240_M23_SJ.out.tab [2024-12-20 09:29:29,582] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: G240_M23_SJ.out.tab [2024-12-20 09:29:29,582] multiqc [DEBUG ] File ignored by snpeff because it exceeded search pattern filesize limit: G240_M23_SJ.out.tab [2024-12-20 09:29:29,582] multiqc [DEBUG ] File ignored by stacks/sumstats because it exceeded search pattern filesize limit: G240_M23_SJ.out.tab [2024-12-20 09:29:31,603] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G240_M23_primary_unique.bam.bai [2024-12-20 09:29:31,626] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G240_M23_marked_dup_metrics.txt [2024-12-20 09:29:31,629] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G240_M23_marked_dup_metrics.txt [2024-12-20 09:29:31,629] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G240_M23_marked_dup_metrics.txt [2024-12-20 09:29:31,629] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G240_M23_marked_dup_metrics.txt [2024-12-20 09:29:31,634] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G240_M23_marked_dup_metrics.txt [2024-12-20 09:29:31,656] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G240_M23_metrics [2024-12-20 09:29:31,658] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G240_M23_metrics [2024-12-20 09:29:31,658] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G240_M23_metrics [2024-12-20 09:29:31,658] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G240_M23_metrics [2024-12-20 09:29:31,662] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G240_M23_metrics [2024-12-20 09:29:31,732] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G240_M23_hist.pdf [2024-12-20 09:29:31,773] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G240_M23_featureCounts.out [2024-12-20 09:29:31,775] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G240_M23_featureCounts.out [2024-12-20 09:29:31,775] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G240_M23_featureCounts.out [2024-12-20 09:29:31,775] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G240_M23_featureCounts.out [2024-12-20 09:29:31,779] multiqc [DEBUG ] File ignored by vep/vep_html because it exceeded search pattern filesize limit: G240_M23_featureCounts.out [2024-12-20 09:29:31,779] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G240_M23_featureCounts.out [2024-12-20 09:29:31,779] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G240_M23_featureCounts.out [2024-12-20 09:29:31,779] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: G240_M23_featureCounts.out [2024-12-20 09:29:31,780] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: G240_M23_featureCounts.out [2024-12-20 09:29:31,780] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: G240_M23_featureCounts.out [2024-12-20 09:29:31,780] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: G240_M23_featureCounts.out [2024-12-20 09:29:31,780] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: G240_M23_featureCounts.out [2024-12-20 09:29:31,798] multiqc [DEBUG ] File ignored by stacks/sumstats because it exceeded search pattern filesize limit: G240_M23_featureCounts.out [2024-12-20 09:29:32,740] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G240_M23_featureCounts.out [2024-12-20 09:29:32,743] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G240_M23_featureCounts.out [2024-12-20 09:29:32,743] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G240_M23_featureCounts.out [2024-12-20 09:29:32,743] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G240_M23_featureCounts.out [2024-12-20 09:29:32,748] multiqc [DEBUG ] File ignored by vep/vep_html because it exceeded search pattern filesize limit: G240_M23_featureCounts.out [2024-12-20 09:29:32,749] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G240_M23_featureCounts.out [2024-12-20 09:29:32,749] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G240_M23_featureCounts.out [2024-12-20 09:29:32,749] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: G240_M23_featureCounts.out [2024-12-20 09:29:32,749] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: G240_M23_featureCounts.out [2024-12-20 09:29:32,749] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: G240_M23_featureCounts.out [2024-12-20 09:29:32,749] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: G240_M23_featureCounts.out [2024-12-20 09:29:32,749] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: G240_M23_featureCounts.out [2024-12-20 09:29:32,771] multiqc [DEBUG ] File ignored by stacks/sumstats because it exceeded search pattern filesize limit: G240_M23_featureCounts.out [2024-12-20 09:29:33,666] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G240_M23_metrics [2024-12-20 09:29:33,668] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G240_M23_metrics [2024-12-20 09:29:33,672] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G240_M23_metrics [2024-12-20 09:29:33,705] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G240_M19_CKDL240041412-1A_22TG7VLT3_L4_2.fq.gz [2024-12-20 09:29:33,708] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G240_M19_CKDL240041412-1A_22TG7VLT3_L4_1.fq.gz [2024-12-20 09:29:33,766] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G240_M19_SJ.out.tab [2024-12-20 09:29:33,769] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G240_M19_SJ.out.tab [2024-12-20 09:29:33,770] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G240_M19_SJ.out.tab [2024-12-20 09:29:33,770] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G240_M19_SJ.out.tab [2024-12-20 09:29:33,774] multiqc [DEBUG ] File ignored by vep/vep_html because it exceeded search pattern filesize limit: G240_M19_SJ.out.tab [2024-12-20 09:29:33,775] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G240_M19_SJ.out.tab [2024-12-20 09:29:33,775] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G240_M19_SJ.out.tab [2024-12-20 09:29:33,775] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: G240_M19_SJ.out.tab [2024-12-20 09:29:33,775] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: G240_M19_SJ.out.tab [2024-12-20 09:29:33,775] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: G240_M19_SJ.out.tab [2024-12-20 09:29:33,775] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: G240_M19_SJ.out.tab [2024-12-20 09:29:33,775] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: G240_M19_SJ.out.tab [2024-12-20 09:29:33,775] multiqc [DEBUG ] File ignored by snpeff because it exceeded search pattern filesize limit: G240_M19_SJ.out.tab [2024-12-20 09:29:33,775] multiqc [DEBUG ] File ignored by stacks/sumstats because it exceeded search pattern filesize limit: G240_M19_SJ.out.tab [2024-12-20 09:29:35,498] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G240_M19_primary_unique.bam.bai [2024-12-20 09:29:35,517] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G240_M19_primary_unique.bam [2024-12-20 09:29:35,553] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G240_M19_marked_dup_metrics.txt [2024-12-20 09:29:35,556] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G240_M19_marked_dup_metrics.txt [2024-12-20 09:29:35,556] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G240_M19_marked_dup_metrics.txt [2024-12-20 09:29:35,556] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G240_M19_marked_dup_metrics.txt [2024-12-20 09:29:35,562] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G240_M19_marked_dup_metrics.txt [2024-12-20 09:29:35,575] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G240_M19_hist.pdf [2024-12-20 09:29:35,593] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G240_M19_metrics [2024-12-20 09:29:35,596] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G240_M19_metrics [2024-12-20 09:29:35,597] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G240_M19_metrics [2024-12-20 09:29:35,597] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G240_M19_metrics [2024-12-20 09:29:35,601] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G240_M19_metrics [2024-12-20 09:29:35,717] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G240_M19_featureCounts.out [2024-12-20 09:29:35,720] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G240_M19_featureCounts.out [2024-12-20 09:29:35,720] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G240_M19_featureCounts.out [2024-12-20 09:29:35,720] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G240_M19_featureCounts.out [2024-12-20 09:29:35,726] multiqc [DEBUG ] File ignored by vep/vep_html because it exceeded search pattern filesize limit: G240_M19_featureCounts.out [2024-12-20 09:29:35,726] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G240_M19_featureCounts.out [2024-12-20 09:29:35,726] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G240_M19_featureCounts.out [2024-12-20 09:29:35,726] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: G240_M19_featureCounts.out [2024-12-20 09:29:35,726] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: G240_M19_featureCounts.out [2024-12-20 09:29:35,726] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: G240_M19_featureCounts.out [2024-12-20 09:29:35,726] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: G240_M19_featureCounts.out [2024-12-20 09:29:35,726] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: G240_M19_featureCounts.out [2024-12-20 09:29:35,748] multiqc [DEBUG ] File ignored by stacks/sumstats because it exceeded search pattern filesize limit: G240_M19_featureCounts.out [2024-12-20 09:29:36,649] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G240_M19_featureCounts.out [2024-12-20 09:29:36,653] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G240_M19_featureCounts.out [2024-12-20 09:29:36,654] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G240_M19_featureCounts.out [2024-12-20 09:29:36,654] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G240_M19_featureCounts.out [2024-12-20 09:29:36,659] multiqc [DEBUG ] File ignored by vep/vep_html because it exceeded search pattern filesize limit: G240_M19_featureCounts.out [2024-12-20 09:29:36,659] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G240_M19_featureCounts.out [2024-12-20 09:29:36,659] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G240_M19_featureCounts.out [2024-12-20 09:29:36,659] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: G240_M19_featureCounts.out [2024-12-20 09:29:36,659] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: G240_M19_featureCounts.out [2024-12-20 09:29:36,659] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: G240_M19_featureCounts.out [2024-12-20 09:29:36,659] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: G240_M19_featureCounts.out [2024-12-20 09:29:36,659] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: G240_M19_featureCounts.out [2024-12-20 09:29:36,678] multiqc [DEBUG ] File ignored by stacks/sumstats because it exceeded search pattern filesize limit: G240_M19_featureCounts.out [2024-12-20 09:29:37,535] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G240_M19_metrics [2024-12-20 09:29:37,537] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G240_M19_metrics [2024-12-20 09:29:37,540] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G240_M19_metrics [2024-12-20 09:29:37,581] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G240_M20_CKDL240041412-1A_22TG7VLT3_L4_2.fq.gz [2024-12-20 09:29:37,584] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G240_M20_CKDL240041412-1A_22TG7VLT3_L4_1.fq.gz [2024-12-20 09:29:37,618] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G240_M20_primary_unique.bam.bai [2024-12-20 09:29:37,658] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G240_M20_primary_unique.bam [2024-12-20 09:29:37,704] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G240_M20_SJ.out.tab [2024-12-20 09:29:37,707] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G240_M20_SJ.out.tab [2024-12-20 09:29:37,707] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G240_M20_SJ.out.tab [2024-12-20 09:29:37,707] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G240_M20_SJ.out.tab [2024-12-20 09:29:37,713] multiqc [DEBUG ] File ignored by vep/vep_html because it exceeded search pattern filesize limit: G240_M20_SJ.out.tab [2024-12-20 09:29:37,713] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G240_M20_SJ.out.tab [2024-12-20 09:29:37,713] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G240_M20_SJ.out.tab [2024-12-20 09:29:37,713] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: G240_M20_SJ.out.tab [2024-12-20 09:29:37,713] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: G240_M20_SJ.out.tab [2024-12-20 09:29:37,713] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: G240_M20_SJ.out.tab [2024-12-20 09:29:37,713] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: G240_M20_SJ.out.tab [2024-12-20 09:29:37,713] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: G240_M20_SJ.out.tab [2024-12-20 09:29:37,713] multiqc [DEBUG ] File ignored by snpeff because it exceeded search pattern filesize limit: G240_M20_SJ.out.tab [2024-12-20 09:29:37,713] multiqc [DEBUG ] File ignored by stacks/sumstats because it exceeded search pattern filesize limit: G240_M20_SJ.out.tab [2024-12-20 09:29:39,630] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G240_M20_marked_dup_metrics.txt [2024-12-20 09:29:39,633] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G240_M20_marked_dup_metrics.txt [2024-12-20 09:29:39,633] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G240_M20_marked_dup_metrics.txt [2024-12-20 09:29:39,633] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G240_M20_marked_dup_metrics.txt [2024-12-20 09:29:39,638] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G240_M20_marked_dup_metrics.txt [2024-12-20 09:29:39,674] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G240_M20_metrics [2024-12-20 09:29:39,677] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G240_M20_metrics [2024-12-20 09:29:39,678] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G240_M20_metrics [2024-12-20 09:29:39,678] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G240_M20_metrics [2024-12-20 09:29:39,683] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G240_M20_metrics [2024-12-20 09:29:39,739] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G240_M20_hist.pdf [2024-12-20 09:29:39,766] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G240_M20_featureCounts.out [2024-12-20 09:29:39,769] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G240_M20_featureCounts.out [2024-12-20 09:29:39,769] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G240_M20_featureCounts.out [2024-12-20 09:29:39,769] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G240_M20_featureCounts.out [2024-12-20 09:29:39,774] multiqc [DEBUG ] File ignored by vep/vep_html because it exceeded search pattern filesize limit: G240_M20_featureCounts.out [2024-12-20 09:29:39,774] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G240_M20_featureCounts.out [2024-12-20 09:29:39,774] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G240_M20_featureCounts.out [2024-12-20 09:29:39,775] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: G240_M20_featureCounts.out [2024-12-20 09:29:39,775] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: G240_M20_featureCounts.out [2024-12-20 09:29:39,775] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: G240_M20_featureCounts.out [2024-12-20 09:29:39,775] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: G240_M20_featureCounts.out [2024-12-20 09:29:39,775] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: G240_M20_featureCounts.out [2024-12-20 09:29:39,798] multiqc [DEBUG ] File ignored by stacks/sumstats because it exceeded search pattern filesize limit: G240_M20_featureCounts.out [2024-12-20 09:29:40,708] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G240_M20_featureCounts.out [2024-12-20 09:29:40,711] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G240_M20_featureCounts.out [2024-12-20 09:29:40,711] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G240_M20_featureCounts.out [2024-12-20 09:29:40,711] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G240_M20_featureCounts.out [2024-12-20 09:29:40,716] multiqc [DEBUG ] File ignored by vep/vep_html because it exceeded search pattern filesize limit: G240_M20_featureCounts.out [2024-12-20 09:29:40,716] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G240_M20_featureCounts.out [2024-12-20 09:29:40,717] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G240_M20_featureCounts.out [2024-12-20 09:29:40,717] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: G240_M20_featureCounts.out [2024-12-20 09:29:40,717] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: G240_M20_featureCounts.out [2024-12-20 09:29:40,717] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: G240_M20_featureCounts.out [2024-12-20 09:29:40,717] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: G240_M20_featureCounts.out [2024-12-20 09:29:40,717] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: G240_M20_featureCounts.out [2024-12-20 09:29:40,738] multiqc [DEBUG ] File ignored by stacks/sumstats because it exceeded search pattern filesize limit: G240_M20_featureCounts.out [2024-12-20 09:29:41,645] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G240_M20_metrics [2024-12-20 09:29:41,648] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G240_M20_metrics [2024-12-20 09:29:41,653] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G240_M20_metrics [2024-12-20 09:29:41,690] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G240_M07_CKDL240041412-1A_22TG7VLT3_L4_2.fq.gz [2024-12-20 09:29:41,693] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G240_M07_CKDL240041412-1A_22TG7VLT3_L4_1.fq.gz [2024-12-20 09:29:41,723] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G240_M07_SJ.out.tab [2024-12-20 09:29:41,725] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G240_M07_SJ.out.tab [2024-12-20 09:29:41,726] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G240_M07_SJ.out.tab [2024-12-20 09:29:41,726] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G240_M07_SJ.out.tab [2024-12-20 09:29:41,731] multiqc [DEBUG ] File ignored by vep/vep_html because it exceeded search pattern filesize limit: G240_M07_SJ.out.tab [2024-12-20 09:29:41,731] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G240_M07_SJ.out.tab [2024-12-20 09:29:41,731] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G240_M07_SJ.out.tab [2024-12-20 09:29:41,731] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: G240_M07_SJ.out.tab [2024-12-20 09:29:41,731] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: G240_M07_SJ.out.tab [2024-12-20 09:29:41,731] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: G240_M07_SJ.out.tab [2024-12-20 09:29:41,731] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: G240_M07_SJ.out.tab [2024-12-20 09:29:41,731] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: G240_M07_SJ.out.tab [2024-12-20 09:29:41,731] multiqc [DEBUG ] File ignored by snpeff because it exceeded search pattern filesize limit: G240_M07_SJ.out.tab [2024-12-20 09:29:41,731] multiqc [DEBUG ] File ignored by stacks/sumstats because it exceeded search pattern filesize limit: G240_M07_SJ.out.tab [2024-12-20 09:29:43,637] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G240_M07_primary_unique.bam.bai [2024-12-20 09:29:43,693] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G240_M07_primary_unique.bam [2024-12-20 09:29:43,723] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G240_M07_marked_dup_metrics.txt [2024-12-20 09:29:43,726] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G240_M07_marked_dup_metrics.txt [2024-12-20 09:29:43,726] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G240_M07_marked_dup_metrics.txt [2024-12-20 09:29:43,727] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G240_M07_marked_dup_metrics.txt [2024-12-20 09:29:43,731] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G240_M07_marked_dup_metrics.txt [2024-12-20 09:29:43,744] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G240_M07_hist.pdf [2024-12-20 09:29:43,760] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G240_M07_metrics [2024-12-20 09:29:43,762] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G240_M07_metrics [2024-12-20 09:29:43,762] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G240_M07_metrics [2024-12-20 09:29:43,762] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G240_M07_metrics [2024-12-20 09:29:43,766] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G240_M07_metrics [2024-12-20 09:29:43,896] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G240_M07_featureCounts.out [2024-12-20 09:29:43,899] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G240_M07_featureCounts.out [2024-12-20 09:29:43,899] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G240_M07_featureCounts.out [2024-12-20 09:29:43,900] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G240_M07_featureCounts.out [2024-12-20 09:29:43,905] multiqc [DEBUG ] File ignored by vep/vep_html because it exceeded search pattern filesize limit: G240_M07_featureCounts.out [2024-12-20 09:29:43,905] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G240_M07_featureCounts.out [2024-12-20 09:29:43,905] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G240_M07_featureCounts.out [2024-12-20 09:29:43,905] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: G240_M07_featureCounts.out [2024-12-20 09:29:43,905] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: G240_M07_featureCounts.out [2024-12-20 09:29:43,905] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: G240_M07_featureCounts.out [2024-12-20 09:29:43,905] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: G240_M07_featureCounts.out [2024-12-20 09:29:43,905] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: G240_M07_featureCounts.out [2024-12-20 09:29:43,928] multiqc [DEBUG ] File ignored by stacks/sumstats because it exceeded search pattern filesize limit: G240_M07_featureCounts.out [2024-12-20 09:29:44,862] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G240_M07_featureCounts.out [2024-12-20 09:29:44,865] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G240_M07_featureCounts.out [2024-12-20 09:29:44,866] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G240_M07_featureCounts.out [2024-12-20 09:29:44,866] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G240_M07_featureCounts.out [2024-12-20 09:29:44,871] multiqc [DEBUG ] File ignored by vep/vep_html because it exceeded search pattern filesize limit: G240_M07_featureCounts.out [2024-12-20 09:29:44,871] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G240_M07_featureCounts.out [2024-12-20 09:29:44,871] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G240_M07_featureCounts.out [2024-12-20 09:29:44,871] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: G240_M07_featureCounts.out [2024-12-20 09:29:44,871] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: G240_M07_featureCounts.out [2024-12-20 09:29:44,871] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: G240_M07_featureCounts.out [2024-12-20 09:29:44,871] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: G240_M07_featureCounts.out [2024-12-20 09:29:44,871] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: G240_M07_featureCounts.out [2024-12-20 09:29:44,891] multiqc [DEBUG ] File ignored by stacks/sumstats because it exceeded search pattern filesize limit: G240_M07_featureCounts.out [2024-12-20 09:29:45,769] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G240_M07_metrics [2024-12-20 09:29:45,771] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G240_M07_metrics [2024-12-20 09:29:45,791] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G240_M07_metrics [2024-12-20 09:29:45,831] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G240_M04_CKDL240041412-1A_22TG7VLT3_L4_1.fq.gz [2024-12-20 09:29:45,834] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G240_M04_CKDL240041412-1A_22TG7VLT3_L4_2.fq.gz [2024-12-20 09:29:45,918] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G240_M04_SJ.out.tab [2024-12-20 09:29:45,921] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G240_M04_SJ.out.tab [2024-12-20 09:29:45,921] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G240_M04_SJ.out.tab [2024-12-20 09:29:45,921] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G240_M04_SJ.out.tab [2024-12-20 09:29:45,927] multiqc [DEBUG ] File ignored by vep/vep_html because it exceeded search pattern filesize limit: G240_M04_SJ.out.tab [2024-12-20 09:29:45,927] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G240_M04_SJ.out.tab [2024-12-20 09:29:45,927] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G240_M04_SJ.out.tab [2024-12-20 09:29:45,927] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: G240_M04_SJ.out.tab [2024-12-20 09:29:45,927] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: G240_M04_SJ.out.tab [2024-12-20 09:29:45,927] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: G240_M04_SJ.out.tab [2024-12-20 09:29:45,927] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: G240_M04_SJ.out.tab [2024-12-20 09:29:45,927] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: G240_M04_SJ.out.tab [2024-12-20 09:29:45,927] multiqc [DEBUG ] File ignored by snpeff because it exceeded search pattern filesize limit: G240_M04_SJ.out.tab [2024-12-20 09:29:45,927] multiqc [DEBUG ] File ignored by stacks/sumstats because it exceeded search pattern filesize limit: G240_M04_SJ.out.tab [2024-12-20 09:29:47,654] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G240_M04_primary_unique.bam.bai [2024-12-20 09:29:47,654] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G240_M04_primary_unique.bam [2024-12-20 09:29:47,670] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G240_M04_marked_dup_metrics.txt [2024-12-20 09:29:47,674] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G240_M04_marked_dup_metrics.txt [2024-12-20 09:29:47,674] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G240_M04_marked_dup_metrics.txt [2024-12-20 09:29:47,674] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G240_M04_marked_dup_metrics.txt [2024-12-20 09:29:47,678] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G240_M04_marked_dup_metrics.txt [2024-12-20 09:29:47,703] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G240_M04_metrics [2024-12-20 09:29:47,706] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G240_M04_metrics [2024-12-20 09:29:47,706] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G240_M04_metrics [2024-12-20 09:29:47,706] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G240_M04_metrics [2024-12-20 09:29:47,710] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G240_M04_metrics [2024-12-20 09:29:47,786] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G240_M04_hist.pdf [2024-12-20 09:29:47,813] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G240_M04_featureCounts.out [2024-12-20 09:29:47,816] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G240_M04_featureCounts.out [2024-12-20 09:29:47,816] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G240_M04_featureCounts.out [2024-12-20 09:29:47,816] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G240_M04_featureCounts.out [2024-12-20 09:29:47,821] multiqc [DEBUG ] File ignored by vep/vep_html because it exceeded search pattern filesize limit: G240_M04_featureCounts.out [2024-12-20 09:29:47,821] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G240_M04_featureCounts.out [2024-12-20 09:29:47,821] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G240_M04_featureCounts.out [2024-12-20 09:29:47,821] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: G240_M04_featureCounts.out [2024-12-20 09:29:47,821] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: G240_M04_featureCounts.out [2024-12-20 09:29:47,821] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: G240_M04_featureCounts.out [2024-12-20 09:29:47,821] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: G240_M04_featureCounts.out [2024-12-20 09:29:47,821] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: G240_M04_featureCounts.out [2024-12-20 09:29:47,840] multiqc [DEBUG ] File ignored by stacks/sumstats because it exceeded search pattern filesize limit: G240_M04_featureCounts.out [2024-12-20 09:29:48,729] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G240_M04_featureCounts.out [2024-12-20 09:29:48,732] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G240_M04_featureCounts.out [2024-12-20 09:29:48,733] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G240_M04_featureCounts.out [2024-12-20 09:29:48,733] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G240_M04_featureCounts.out [2024-12-20 09:29:48,737] multiqc [DEBUG ] File ignored by vep/vep_html because it exceeded search pattern filesize limit: G240_M04_featureCounts.out [2024-12-20 09:29:48,737] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G240_M04_featureCounts.out [2024-12-20 09:29:48,737] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G240_M04_featureCounts.out [2024-12-20 09:29:48,737] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: G240_M04_featureCounts.out [2024-12-20 09:29:48,737] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: G240_M04_featureCounts.out [2024-12-20 09:29:48,737] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: G240_M04_featureCounts.out [2024-12-20 09:29:48,737] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: G240_M04_featureCounts.out [2024-12-20 09:29:48,738] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: G240_M04_featureCounts.out [2024-12-20 09:29:48,758] multiqc [DEBUG ] File ignored by stacks/sumstats because it exceeded search pattern filesize limit: G240_M04_featureCounts.out [2024-12-20 09:29:49,641] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G240_M04_metrics [2024-12-20 09:29:49,643] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G240_M04_metrics [2024-12-20 09:29:49,646] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G240_M04_metrics [2024-12-20 09:29:49,682] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G240_M39_CKDL240041412-1A_22TG7VLT3_L4_2.fq.gz [2024-12-20 09:29:49,684] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G240_M39_CKDL240041412-1A_22TG7VLT3_L4_1.fq.gz [2024-12-20 09:29:49,745] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G240_M39_SJ.out.tab [2024-12-20 09:29:49,747] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G240_M39_SJ.out.tab [2024-12-20 09:29:49,748] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G240_M39_SJ.out.tab [2024-12-20 09:29:49,748] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G240_M39_SJ.out.tab [2024-12-20 09:29:49,753] multiqc [DEBUG ] File ignored by vep/vep_html because it exceeded search pattern filesize limit: G240_M39_SJ.out.tab [2024-12-20 09:29:49,753] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G240_M39_SJ.out.tab [2024-12-20 09:29:49,753] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G240_M39_SJ.out.tab [2024-12-20 09:29:49,753] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: G240_M39_SJ.out.tab [2024-12-20 09:29:49,753] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: G240_M39_SJ.out.tab [2024-12-20 09:29:49,754] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: G240_M39_SJ.out.tab [2024-12-20 09:29:49,754] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: G240_M39_SJ.out.tab [2024-12-20 09:29:49,754] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: G240_M39_SJ.out.tab [2024-12-20 09:29:49,754] multiqc [DEBUG ] File ignored by snpeff because it exceeded search pattern filesize limit: G240_M39_SJ.out.tab [2024-12-20 09:29:49,754] multiqc [DEBUG ] File ignored by stacks/sumstats because it exceeded search pattern filesize limit: G240_M39_SJ.out.tab [2024-12-20 09:29:51,814] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G240_M39_primary_unique.bam.bai [2024-12-20 09:29:51,847] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G240_M39_primary_unique.bam [2024-12-20 09:29:51,887] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G240_M39_marked_dup_metrics.txt [2024-12-20 09:29:51,890] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G240_M39_marked_dup_metrics.txt [2024-12-20 09:29:51,890] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G240_M39_marked_dup_metrics.txt [2024-12-20 09:29:51,890] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G240_M39_marked_dup_metrics.txt [2024-12-20 09:29:51,895] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G240_M39_marked_dup_metrics.txt [2024-12-20 09:29:51,929] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G240_M39_metrics [2024-12-20 09:29:51,931] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G240_M39_metrics [2024-12-20 09:29:51,932] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G240_M39_metrics [2024-12-20 09:29:51,932] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G240_M39_metrics [2024-12-20 09:29:51,937] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G240_M39_metrics [2024-12-20 09:29:51,996] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G240_M39_hist.pdf [2024-12-20 09:29:52,023] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G240_M39_featureCounts.out [2024-12-20 09:29:52,025] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G240_M39_featureCounts.out [2024-12-20 09:29:52,025] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G240_M39_featureCounts.out [2024-12-20 09:29:52,025] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G240_M39_featureCounts.out [2024-12-20 09:29:52,029] multiqc [DEBUG ] File ignored by vep/vep_html because it exceeded search pattern filesize limit: G240_M39_featureCounts.out [2024-12-20 09:29:52,029] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G240_M39_featureCounts.out [2024-12-20 09:29:52,029] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G240_M39_featureCounts.out [2024-12-20 09:29:52,029] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: G240_M39_featureCounts.out [2024-12-20 09:29:52,029] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: G240_M39_featureCounts.out [2024-12-20 09:29:52,029] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: G240_M39_featureCounts.out [2024-12-20 09:29:52,029] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: G240_M39_featureCounts.out [2024-12-20 09:29:52,029] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: G240_M39_featureCounts.out [2024-12-20 09:29:52,049] multiqc [DEBUG ] File ignored by stacks/sumstats because it exceeded search pattern filesize limit: G240_M39_featureCounts.out [2024-12-20 09:29:52,966] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G240_M39_featureCounts.out [2024-12-20 09:29:52,969] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G240_M39_featureCounts.out [2024-12-20 09:29:52,970] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G240_M39_featureCounts.out [2024-12-20 09:29:52,970] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G240_M39_featureCounts.out [2024-12-20 09:29:52,974] multiqc [DEBUG ] File ignored by vep/vep_html because it exceeded search pattern filesize limit: G240_M39_featureCounts.out [2024-12-20 09:29:52,974] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G240_M39_featureCounts.out [2024-12-20 09:29:52,974] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G240_M39_featureCounts.out [2024-12-20 09:29:52,975] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: G240_M39_featureCounts.out [2024-12-20 09:29:52,975] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: G240_M39_featureCounts.out [2024-12-20 09:29:52,975] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: G240_M39_featureCounts.out [2024-12-20 09:29:52,975] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: G240_M39_featureCounts.out [2024-12-20 09:29:52,975] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: G240_M39_featureCounts.out [2024-12-20 09:29:52,995] multiqc [DEBUG ] File ignored by stacks/sumstats because it exceeded search pattern filesize limit: G240_M39_featureCounts.out [2024-12-20 09:29:53,866] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G240_M39_metrics [2024-12-20 09:29:53,868] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G240_M39_metrics [2024-12-20 09:29:53,871] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G240_M39_metrics [2024-12-20 09:29:53,909] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G240_M36_CKDL240041412-1A_22TG7VLT3_L4_2.fq.gz [2024-12-20 09:29:53,912] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G240_M36_CKDL240041412-1A_22TG7VLT3_L4_1.fq.gz [2024-12-20 09:29:53,913] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G240_M36_primary_unique.bam.bai [2024-12-20 09:29:53,933] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G240_M36_primary_unique.bam [2024-12-20 09:29:54,030] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G240_M36_SJ.out.tab [2024-12-20 09:29:54,033] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G240_M36_SJ.out.tab [2024-12-20 09:29:54,033] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G240_M36_SJ.out.tab [2024-12-20 09:29:54,033] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G240_M36_SJ.out.tab [2024-12-20 09:29:54,038] multiqc [DEBUG ] File ignored by vep/vep_html because it exceeded search pattern filesize limit: G240_M36_SJ.out.tab [2024-12-20 09:29:54,038] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G240_M36_SJ.out.tab [2024-12-20 09:29:54,038] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G240_M36_SJ.out.tab [2024-12-20 09:29:54,038] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: G240_M36_SJ.out.tab [2024-12-20 09:29:54,038] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: G240_M36_SJ.out.tab [2024-12-20 09:29:54,038] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: G240_M36_SJ.out.tab [2024-12-20 09:29:54,038] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: G240_M36_SJ.out.tab [2024-12-20 09:29:54,038] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: G240_M36_SJ.out.tab [2024-12-20 09:29:54,038] multiqc [DEBUG ] File ignored by snpeff because it exceeded search pattern filesize limit: G240_M36_SJ.out.tab [2024-12-20 09:29:54,038] multiqc [DEBUG ] File ignored by stacks/sumstats because it exceeded search pattern filesize limit: G240_M36_SJ.out.tab [2024-12-20 09:29:56,270] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G240_M36_marked_dup_metrics.txt [2024-12-20 09:29:56,273] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G240_M36_marked_dup_metrics.txt [2024-12-20 09:29:56,274] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G240_M36_marked_dup_metrics.txt [2024-12-20 09:29:56,274] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G240_M36_marked_dup_metrics.txt [2024-12-20 09:29:56,279] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G240_M36_marked_dup_metrics.txt [2024-12-20 09:29:56,329] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G240_M36_metrics [2024-12-20 09:29:56,332] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G240_M36_metrics [2024-12-20 09:29:56,332] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G240_M36_metrics [2024-12-20 09:29:56,332] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G240_M36_metrics [2024-12-20 09:29:56,337] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G240_M36_metrics [2024-12-20 09:29:56,415] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G240_M36_hist.pdf [2024-12-20 09:29:56,446] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G240_M36_featureCounts.out [2024-12-20 09:29:56,448] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G240_M36_featureCounts.out [2024-12-20 09:29:56,460] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G240_M36_featureCounts.out [2024-12-20 09:29:56,460] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G240_M36_featureCounts.out [2024-12-20 09:29:56,466] multiqc [DEBUG ] File ignored by vep/vep_html because it exceeded search pattern filesize limit: G240_M36_featureCounts.out [2024-12-20 09:29:56,466] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G240_M36_featureCounts.out [2024-12-20 09:29:56,466] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G240_M36_featureCounts.out [2024-12-20 09:29:56,466] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: G240_M36_featureCounts.out [2024-12-20 09:29:56,466] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: G240_M36_featureCounts.out [2024-12-20 09:29:56,466] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: G240_M36_featureCounts.out [2024-12-20 09:29:56,466] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: G240_M36_featureCounts.out [2024-12-20 09:29:56,466] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: G240_M36_featureCounts.out [2024-12-20 09:29:56,493] multiqc [DEBUG ] File ignored by stacks/sumstats because it exceeded search pattern filesize limit: G240_M36_featureCounts.out [2024-12-20 09:29:57,390] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G240_M36_featureCounts.out [2024-12-20 09:29:57,393] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G240_M36_featureCounts.out [2024-12-20 09:29:57,394] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G240_M36_featureCounts.out [2024-12-20 09:29:57,394] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G240_M36_featureCounts.out [2024-12-20 09:29:57,399] multiqc [DEBUG ] File ignored by vep/vep_html because it exceeded search pattern filesize limit: G240_M36_featureCounts.out [2024-12-20 09:29:57,399] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G240_M36_featureCounts.out [2024-12-20 09:29:57,399] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G240_M36_featureCounts.out [2024-12-20 09:29:57,399] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: G240_M36_featureCounts.out [2024-12-20 09:29:57,399] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: G240_M36_featureCounts.out [2024-12-20 09:29:57,399] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: G240_M36_featureCounts.out [2024-12-20 09:29:57,399] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: G240_M36_featureCounts.out [2024-12-20 09:29:57,399] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: G240_M36_featureCounts.out [2024-12-20 09:29:57,423] multiqc [DEBUG ] File ignored by stacks/sumstats because it exceeded search pattern filesize limit: G240_M36_featureCounts.out [2024-12-20 09:29:58,288] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G240_M36_metrics [2024-12-20 09:29:58,291] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G240_M36_metrics [2024-12-20 09:29:58,295] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G240_M36_metrics [2024-12-20 09:29:58,330] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G240_M27_CKDL240041412-1A_22TG7VLT3_L4_2.fq.gz [2024-12-20 09:29:58,333] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G240_M27_CKDL240041412-1A_22TG7VLT3_L4_1.fq.gz [2024-12-20 09:29:58,383] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G240_M27_primary_unique.bam [2024-12-20 09:29:58,410] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G240_M27_SJ.out.tab [2024-12-20 09:29:58,413] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G240_M27_SJ.out.tab [2024-12-20 09:29:58,413] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G240_M27_SJ.out.tab [2024-12-20 09:29:58,413] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G240_M27_SJ.out.tab [2024-12-20 09:29:58,418] multiqc [DEBUG ] File ignored by vep/vep_html because it exceeded search pattern filesize limit: G240_M27_SJ.out.tab [2024-12-20 09:29:58,418] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G240_M27_SJ.out.tab [2024-12-20 09:29:58,418] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G240_M27_SJ.out.tab [2024-12-20 09:29:58,418] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: G240_M27_SJ.out.tab [2024-12-20 09:29:58,418] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: G240_M27_SJ.out.tab [2024-12-20 09:29:58,418] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: G240_M27_SJ.out.tab [2024-12-20 09:29:58,418] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: G240_M27_SJ.out.tab [2024-12-20 09:29:58,418] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: G240_M27_SJ.out.tab [2024-12-20 09:29:58,418] multiqc [DEBUG ] File ignored by snpeff because it exceeded search pattern filesize limit: G240_M27_SJ.out.tab [2024-12-20 09:29:58,418] multiqc [DEBUG ] File ignored by stacks/sumstats because it exceeded search pattern filesize limit: G240_M27_SJ.out.tab [2024-12-20 09:30:00,703] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G240_M27_primary_unique.bam.bai [2024-12-20 09:30:00,725] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G240_M27_marked_dup_metrics.txt [2024-12-20 09:30:00,728] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G240_M27_marked_dup_metrics.txt [2024-12-20 09:30:00,729] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G240_M27_marked_dup_metrics.txt [2024-12-20 09:30:00,729] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G240_M27_marked_dup_metrics.txt [2024-12-20 09:30:00,734] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G240_M27_marked_dup_metrics.txt [2024-12-20 09:30:00,748] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G240_M27_hist.pdf [2024-12-20 09:30:00,766] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G240_M27_metrics [2024-12-20 09:30:00,769] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G240_M27_metrics [2024-12-20 09:30:00,770] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G240_M27_metrics [2024-12-20 09:30:00,770] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G240_M27_metrics [2024-12-20 09:30:00,775] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G240_M27_metrics [2024-12-20 09:30:00,862] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G240_M27_featureCounts.out [2024-12-20 09:30:00,864] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G240_M27_featureCounts.out [2024-12-20 09:30:00,865] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G240_M27_featureCounts.out [2024-12-20 09:30:00,865] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G240_M27_featureCounts.out [2024-12-20 09:30:00,870] multiqc [DEBUG ] File ignored by vep/vep_html because it exceeded search pattern filesize limit: G240_M27_featureCounts.out [2024-12-20 09:30:00,870] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G240_M27_featureCounts.out [2024-12-20 09:30:00,870] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G240_M27_featureCounts.out [2024-12-20 09:30:00,870] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: G240_M27_featureCounts.out [2024-12-20 09:30:00,870] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: G240_M27_featureCounts.out [2024-12-20 09:30:00,870] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: G240_M27_featureCounts.out [2024-12-20 09:30:00,870] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: G240_M27_featureCounts.out [2024-12-20 09:30:00,870] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: G240_M27_featureCounts.out [2024-12-20 09:30:00,890] multiqc [DEBUG ] File ignored by stacks/sumstats because it exceeded search pattern filesize limit: G240_M27_featureCounts.out [2024-12-20 09:30:01,798] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G240_M27_featureCounts.out [2024-12-20 09:30:01,801] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G240_M27_featureCounts.out [2024-12-20 09:30:01,810] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G240_M27_featureCounts.out [2024-12-20 09:30:01,810] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G240_M27_featureCounts.out [2024-12-20 09:30:01,815] multiqc [DEBUG ] File ignored by vep/vep_html because it exceeded search pattern filesize limit: G240_M27_featureCounts.out [2024-12-20 09:30:01,815] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G240_M27_featureCounts.out [2024-12-20 09:30:01,815] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G240_M27_featureCounts.out [2024-12-20 09:30:01,815] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: G240_M27_featureCounts.out [2024-12-20 09:30:01,815] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: G240_M27_featureCounts.out [2024-12-20 09:30:01,815] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: G240_M27_featureCounts.out [2024-12-20 09:30:01,815] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: G240_M27_featureCounts.out [2024-12-20 09:30:01,815] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: G240_M27_featureCounts.out [2024-12-20 09:30:01,838] multiqc [DEBUG ] File ignored by stacks/sumstats because it exceeded search pattern filesize limit: G240_M27_featureCounts.out [2024-12-20 09:30:02,729] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G240_M27_metrics [2024-12-20 09:30:02,731] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G240_M27_metrics [2024-12-20 09:30:02,735] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G240_M27_metrics [2024-12-20 09:30:02,778] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G240_M24_CKDL240041412-1A_22TG7VLT3_L4_2.fq.gz [2024-12-20 09:30:02,781] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G240_M24_CKDL240041412-1A_22TG7VLT3_L4_1.fq.gz [2024-12-20 09:30:02,839] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G240_M24_primary_unique.bam.bai [2024-12-20 09:30:02,841] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G240_M24_primary_unique.bam [2024-12-20 09:30:02,899] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G240_M24_SJ.out.tab [2024-12-20 09:30:02,901] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G240_M24_SJ.out.tab [2024-12-20 09:30:02,902] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G240_M24_SJ.out.tab [2024-12-20 09:30:02,902] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G240_M24_SJ.out.tab [2024-12-20 09:30:02,907] multiqc [DEBUG ] File ignored by vep/vep_html because it exceeded search pattern filesize limit: G240_M24_SJ.out.tab [2024-12-20 09:30:02,907] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G240_M24_SJ.out.tab [2024-12-20 09:30:02,907] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G240_M24_SJ.out.tab [2024-12-20 09:30:02,907] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: G240_M24_SJ.out.tab [2024-12-20 09:30:02,907] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: G240_M24_SJ.out.tab [2024-12-20 09:30:02,907] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: G240_M24_SJ.out.tab [2024-12-20 09:30:02,907] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: G240_M24_SJ.out.tab [2024-12-20 09:30:02,907] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: G240_M24_SJ.out.tab [2024-12-20 09:30:02,907] multiqc [DEBUG ] File ignored by snpeff because it exceeded search pattern filesize limit: G240_M24_SJ.out.tab [2024-12-20 09:30:02,908] multiqc [DEBUG ] File ignored by stacks/sumstats because it exceeded search pattern filesize limit: G240_M24_SJ.out.tab [2024-12-20 09:30:04,901] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G240_M24_marked_dup_metrics.txt [2024-12-20 09:30:04,903] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G240_M24_marked_dup_metrics.txt [2024-12-20 09:30:04,903] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G240_M24_marked_dup_metrics.txt [2024-12-20 09:30:04,903] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G240_M24_marked_dup_metrics.txt [2024-12-20 09:30:04,907] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G240_M24_marked_dup_metrics.txt [2024-12-20 09:30:04,941] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G240_M24_metrics [2024-12-20 09:30:04,943] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G240_M24_metrics [2024-12-20 09:30:04,943] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G240_M24_metrics [2024-12-20 09:30:04,943] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G240_M24_metrics [2024-12-20 09:30:04,947] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G240_M24_metrics [2024-12-20 09:30:05,022] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G240_M24_hist.pdf [2024-12-20 09:30:05,038] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G240_M24_featureCounts.out [2024-12-20 09:30:05,039] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G240_M24_featureCounts.out [2024-12-20 09:30:05,040] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G240_M24_featureCounts.out [2024-12-20 09:30:05,040] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G240_M24_featureCounts.out [2024-12-20 09:30:05,043] multiqc [DEBUG ] File ignored by vep/vep_html because it exceeded search pattern filesize limit: G240_M24_featureCounts.out [2024-12-20 09:30:05,043] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G240_M24_featureCounts.out [2024-12-20 09:30:05,043] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G240_M24_featureCounts.out [2024-12-20 09:30:05,043] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: G240_M24_featureCounts.out [2024-12-20 09:30:05,043] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: G240_M24_featureCounts.out [2024-12-20 09:30:05,043] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: G240_M24_featureCounts.out [2024-12-20 09:30:05,043] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: G240_M24_featureCounts.out [2024-12-20 09:30:05,043] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: G240_M24_featureCounts.out [2024-12-20 09:30:05,061] multiqc [DEBUG ] File ignored by stacks/sumstats because it exceeded search pattern filesize limit: G240_M24_featureCounts.out [2024-12-20 09:30:05,961] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G240_M24_featureCounts.out [2024-12-20 09:30:05,963] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G240_M24_featureCounts.out [2024-12-20 09:30:05,964] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G240_M24_featureCounts.out [2024-12-20 09:30:05,964] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G240_M24_featureCounts.out [2024-12-20 09:30:05,969] multiqc [DEBUG ] File ignored by vep/vep_html because it exceeded search pattern filesize limit: G240_M24_featureCounts.out [2024-12-20 09:30:05,969] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G240_M24_featureCounts.out [2024-12-20 09:30:05,969] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G240_M24_featureCounts.out [2024-12-20 09:30:05,969] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: G240_M24_featureCounts.out [2024-12-20 09:30:05,969] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: G240_M24_featureCounts.out [2024-12-20 09:30:05,969] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: G240_M24_featureCounts.out [2024-12-20 09:30:05,969] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: G240_M24_featureCounts.out [2024-12-20 09:30:05,969] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: G240_M24_featureCounts.out [2024-12-20 09:30:05,990] multiqc [DEBUG ] File ignored by stacks/sumstats because it exceeded search pattern filesize limit: G240_M24_featureCounts.out [2024-12-20 09:30:06,877] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G240_M24_metrics [2024-12-20 09:30:06,880] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G240_M24_metrics [2024-12-20 09:30:06,899] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G240_M24_metrics [2024-12-20 09:30:06,939] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G240_M21_CKDL240041412-1A_22TG7VLT3_L4_1.fq.gz [2024-12-20 09:30:06,942] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G240_M21_CKDL240041412-1A_22TG7VLT3_L4_2.fq.gz [2024-12-20 09:30:07,005] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G240_M21_SJ.out.tab [2024-12-20 09:30:07,008] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G240_M21_SJ.out.tab [2024-12-20 09:30:07,008] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G240_M21_SJ.out.tab [2024-12-20 09:30:07,008] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G240_M21_SJ.out.tab [2024-12-20 09:30:07,012] multiqc [DEBUG ] File ignored by vep/vep_html because it exceeded search pattern filesize limit: G240_M21_SJ.out.tab [2024-12-20 09:30:07,013] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G240_M21_SJ.out.tab [2024-12-20 09:30:07,013] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G240_M21_SJ.out.tab [2024-12-20 09:30:07,013] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: G240_M21_SJ.out.tab [2024-12-20 09:30:07,013] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: G240_M21_SJ.out.tab [2024-12-20 09:30:07,013] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: G240_M21_SJ.out.tab [2024-12-20 09:30:07,013] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: G240_M21_SJ.out.tab [2024-12-20 09:30:07,013] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: G240_M21_SJ.out.tab [2024-12-20 09:30:07,013] multiqc [DEBUG ] File ignored by snpeff because it exceeded search pattern filesize limit: G240_M21_SJ.out.tab [2024-12-20 09:30:07,013] multiqc [DEBUG ] File ignored by stacks/sumstats because it exceeded search pattern filesize limit: G240_M21_SJ.out.tab [2024-12-20 09:30:09,357] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G240_M21_primary_unique.bam.bai [2024-12-20 09:30:09,357] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G240_M21_primary_unique.bam [2024-12-20 09:30:09,419] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G240_M21_marked_dup_metrics.txt [2024-12-20 09:30:09,422] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G240_M21_marked_dup_metrics.txt [2024-12-20 09:30:09,422] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G240_M21_marked_dup_metrics.txt [2024-12-20 09:30:09,422] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G240_M21_marked_dup_metrics.txt [2024-12-20 09:30:09,427] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G240_M21_marked_dup_metrics.txt [2024-12-20 09:30:09,444] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G240_M21_hist.pdf [2024-12-20 09:30:09,465] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G240_M21_metrics [2024-12-20 09:30:09,467] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G240_M21_metrics [2024-12-20 09:30:09,468] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G240_M21_metrics [2024-12-20 09:30:09,468] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G240_M21_metrics [2024-12-20 09:30:09,473] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G240_M21_metrics [2024-12-20 09:30:09,571] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G240_M21_featureCounts.out [2024-12-20 09:30:09,574] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G240_M21_featureCounts.out [2024-12-20 09:30:09,574] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G240_M21_featureCounts.out [2024-12-20 09:30:09,574] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G240_M21_featureCounts.out [2024-12-20 09:30:09,579] multiqc [DEBUG ] File ignored by vep/vep_html because it exceeded search pattern filesize limit: G240_M21_featureCounts.out [2024-12-20 09:30:09,579] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G240_M21_featureCounts.out [2024-12-20 09:30:09,580] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G240_M21_featureCounts.out [2024-12-20 09:30:09,580] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: G240_M21_featureCounts.out [2024-12-20 09:30:09,580] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: G240_M21_featureCounts.out [2024-12-20 09:30:09,580] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: G240_M21_featureCounts.out [2024-12-20 09:30:09,580] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: G240_M21_featureCounts.out [2024-12-20 09:30:09,580] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: G240_M21_featureCounts.out [2024-12-20 09:30:09,602] multiqc [DEBUG ] File ignored by stacks/sumstats because it exceeded search pattern filesize limit: G240_M21_featureCounts.out [2024-12-20 09:30:10,512] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G240_M21_featureCounts.out [2024-12-20 09:30:10,514] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G240_M21_featureCounts.out [2024-12-20 09:30:10,515] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G240_M21_featureCounts.out [2024-12-20 09:30:10,515] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G240_M21_featureCounts.out [2024-12-20 09:30:10,520] multiqc [DEBUG ] File ignored by vep/vep_html because it exceeded search pattern filesize limit: G240_M21_featureCounts.out [2024-12-20 09:30:10,520] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G240_M21_featureCounts.out [2024-12-20 09:30:10,520] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G240_M21_featureCounts.out [2024-12-20 09:30:10,520] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: G240_M21_featureCounts.out [2024-12-20 09:30:10,520] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: G240_M21_featureCounts.out [2024-12-20 09:30:10,520] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: G240_M21_featureCounts.out [2024-12-20 09:30:10,520] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: G240_M21_featureCounts.out [2024-12-20 09:30:10,521] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: G240_M21_featureCounts.out [2024-12-20 09:30:10,542] multiqc [DEBUG ] File ignored by stacks/sumstats because it exceeded search pattern filesize limit: G240_M21_featureCounts.out [2024-12-20 09:30:11,410] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G240_M21_metrics [2024-12-20 09:30:11,412] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G240_M21_metrics [2024-12-20 09:30:11,416] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G240_M21_metrics [2024-12-20 09:30:11,458] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G240_M12_CKDL240041412-1A_22TG7VLT3_L4_1.fq.gz [2024-12-20 09:30:11,461] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G240_M12_CKDL240041412-1A_22TG7VLT3_L4_2.fq.gz [2024-12-20 09:30:11,484] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G240_M12_primary_unique.bam [2024-12-20 09:30:11,517] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G240_M12_primary_unique.bam.bai [2024-12-20 09:30:11,546] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G240_M12_SJ.out.tab [2024-12-20 09:30:11,548] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G240_M12_SJ.out.tab [2024-12-20 09:30:11,549] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G240_M12_SJ.out.tab [2024-12-20 09:30:11,549] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G240_M12_SJ.out.tab [2024-12-20 09:30:11,554] multiqc [DEBUG ] File ignored by vep/vep_html because it exceeded search pattern filesize limit: G240_M12_SJ.out.tab [2024-12-20 09:30:11,554] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G240_M12_SJ.out.tab [2024-12-20 09:30:11,554] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G240_M12_SJ.out.tab [2024-12-20 09:30:11,554] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: G240_M12_SJ.out.tab [2024-12-20 09:30:11,555] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: G240_M12_SJ.out.tab [2024-12-20 09:30:11,555] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: G240_M12_SJ.out.tab [2024-12-20 09:30:11,555] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: G240_M12_SJ.out.tab [2024-12-20 09:30:11,555] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: G240_M12_SJ.out.tab [2024-12-20 09:30:11,555] multiqc [DEBUG ] File ignored by snpeff because it exceeded search pattern filesize limit: G240_M12_SJ.out.tab [2024-12-20 09:30:11,555] multiqc [DEBUG ] File ignored by stacks/sumstats because it exceeded search pattern filesize limit: G240_M12_SJ.out.tab [2024-12-20 09:30:13,659] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G240_M12_marked_dup_metrics.txt [2024-12-20 09:30:13,661] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G240_M12_marked_dup_metrics.txt [2024-12-20 09:30:13,661] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G240_M12_marked_dup_metrics.txt [2024-12-20 09:30:13,661] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G240_M12_marked_dup_metrics.txt [2024-12-20 09:30:13,664] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G240_M12_marked_dup_metrics.txt [2024-12-20 09:30:13,697] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G240_M12_metrics [2024-12-20 09:30:13,699] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G240_M12_metrics [2024-12-20 09:30:13,699] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G240_M12_metrics [2024-12-20 09:30:13,699] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G240_M12_metrics [2024-12-20 09:30:13,703] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G240_M12_metrics [2024-12-20 09:30:13,752] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G240_M12_hist.pdf [2024-12-20 09:30:13,783] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G240_M12_featureCounts.out [2024-12-20 09:30:13,785] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G240_M12_featureCounts.out [2024-12-20 09:30:13,786] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G240_M12_featureCounts.out [2024-12-20 09:30:13,786] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G240_M12_featureCounts.out [2024-12-20 09:30:13,791] multiqc [DEBUG ] File ignored by vep/vep_html because it exceeded search pattern filesize limit: G240_M12_featureCounts.out [2024-12-20 09:30:13,791] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G240_M12_featureCounts.out [2024-12-20 09:30:13,791] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G240_M12_featureCounts.out [2024-12-20 09:30:13,791] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: G240_M12_featureCounts.out [2024-12-20 09:30:13,791] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: G240_M12_featureCounts.out [2024-12-20 09:30:13,791] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: G240_M12_featureCounts.out [2024-12-20 09:30:13,791] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: G240_M12_featureCounts.out [2024-12-20 09:30:13,791] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: G240_M12_featureCounts.out [2024-12-20 09:30:13,813] multiqc [DEBUG ] File ignored by stacks/sumstats because it exceeded search pattern filesize limit: G240_M12_featureCounts.out [2024-12-20 09:30:14,727] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G240_M12_featureCounts.out [2024-12-20 09:30:14,729] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G240_M12_featureCounts.out [2024-12-20 09:30:14,730] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G240_M12_featureCounts.out [2024-12-20 09:30:14,730] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G240_M12_featureCounts.out [2024-12-20 09:30:14,734] multiqc [DEBUG ] File ignored by vep/vep_html because it exceeded search pattern filesize limit: G240_M12_featureCounts.out [2024-12-20 09:30:14,734] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G240_M12_featureCounts.out [2024-12-20 09:30:14,734] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G240_M12_featureCounts.out [2024-12-20 09:30:14,734] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: G240_M12_featureCounts.out [2024-12-20 09:30:14,734] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: G240_M12_featureCounts.out [2024-12-20 09:30:14,734] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: G240_M12_featureCounts.out [2024-12-20 09:30:14,734] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: G240_M12_featureCounts.out [2024-12-20 09:30:14,734] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: G240_M12_featureCounts.out [2024-12-20 09:30:14,755] multiqc [DEBUG ] File ignored by stacks/sumstats because it exceeded search pattern filesize limit: G240_M12_featureCounts.out [2024-12-20 09:30:15,651] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G240_M12_metrics [2024-12-20 09:30:15,653] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G240_M12_metrics [2024-12-20 09:30:15,656] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G240_M12_metrics [2024-12-20 09:30:15,694] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G240_M08_CKDL240041412-1A_22TG7VLT3_L4_2.fq.gz [2024-12-20 09:30:15,696] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G240_M08_CKDL240041412-1A_22TG7VLT3_L4_1.fq.gz [2024-12-20 09:30:15,753] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G240_M08_primary_unique.bam.bai [2024-12-20 09:30:15,781] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G240_M08_SJ.out.tab [2024-12-20 09:30:15,784] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G240_M08_SJ.out.tab [2024-12-20 09:30:15,784] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G240_M08_SJ.out.tab [2024-12-20 09:30:15,784] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G240_M08_SJ.out.tab [2024-12-20 09:30:15,789] multiqc [DEBUG ] File ignored by vep/vep_html because it exceeded search pattern filesize limit: G240_M08_SJ.out.tab [2024-12-20 09:30:15,789] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G240_M08_SJ.out.tab [2024-12-20 09:30:15,789] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G240_M08_SJ.out.tab [2024-12-20 09:30:15,789] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: G240_M08_SJ.out.tab [2024-12-20 09:30:15,789] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: G240_M08_SJ.out.tab [2024-12-20 09:30:15,789] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: G240_M08_SJ.out.tab [2024-12-20 09:30:15,790] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: G240_M08_SJ.out.tab [2024-12-20 09:30:15,790] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: G240_M08_SJ.out.tab [2024-12-20 09:30:15,790] multiqc [DEBUG ] File ignored by snpeff because it exceeded search pattern filesize limit: G240_M08_SJ.out.tab [2024-12-20 09:30:15,790] multiqc [DEBUG ] File ignored by stacks/sumstats because it exceeded search pattern filesize limit: G240_M08_SJ.out.tab [2024-12-20 09:30:17,499] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G240_M08_primary_unique.bam [2024-12-20 09:30:17,542] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G240_M08_marked_dup_metrics.txt [2024-12-20 09:30:17,545] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G240_M08_marked_dup_metrics.txt [2024-12-20 09:30:17,545] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G240_M08_marked_dup_metrics.txt [2024-12-20 09:30:17,546] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G240_M08_marked_dup_metrics.txt [2024-12-20 09:30:17,550] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G240_M08_marked_dup_metrics.txt [2024-12-20 09:30:17,562] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G240_M08_hist.pdf [2024-12-20 09:30:17,574] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G240_M08_metrics [2024-12-20 09:30:17,577] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G240_M08_metrics [2024-12-20 09:30:17,577] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G240_M08_metrics [2024-12-20 09:30:17,577] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G240_M08_metrics [2024-12-20 09:30:17,582] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G240_M08_metrics [2024-12-20 09:30:17,657] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G240_M08_featureCounts.out [2024-12-20 09:30:17,660] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G240_M08_featureCounts.out [2024-12-20 09:30:17,660] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G240_M08_featureCounts.out [2024-12-20 09:30:17,660] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G240_M08_featureCounts.out [2024-12-20 09:30:17,665] multiqc [DEBUG ] File ignored by vep/vep_html because it exceeded search pattern filesize limit: G240_M08_featureCounts.out [2024-12-20 09:30:17,665] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G240_M08_featureCounts.out [2024-12-20 09:30:17,665] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G240_M08_featureCounts.out [2024-12-20 09:30:17,665] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: G240_M08_featureCounts.out [2024-12-20 09:30:17,666] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: G240_M08_featureCounts.out [2024-12-20 09:30:17,666] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: G240_M08_featureCounts.out [2024-12-20 09:30:17,666] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: G240_M08_featureCounts.out [2024-12-20 09:30:17,666] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: G240_M08_featureCounts.out [2024-12-20 09:30:17,687] multiqc [DEBUG ] File ignored by stacks/sumstats because it exceeded search pattern filesize limit: G240_M08_featureCounts.out [2024-12-20 09:30:18,585] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G240_M08_featureCounts.out [2024-12-20 09:30:18,588] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G240_M08_featureCounts.out [2024-12-20 09:30:18,588] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G240_M08_featureCounts.out [2024-12-20 09:30:18,588] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G240_M08_featureCounts.out [2024-12-20 09:30:18,593] multiqc [DEBUG ] File ignored by vep/vep_html because it exceeded search pattern filesize limit: G240_M08_featureCounts.out [2024-12-20 09:30:18,593] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G240_M08_featureCounts.out [2024-12-20 09:30:18,594] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G240_M08_featureCounts.out [2024-12-20 09:30:18,594] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: G240_M08_featureCounts.out [2024-12-20 09:30:18,594] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: G240_M08_featureCounts.out [2024-12-20 09:30:18,594] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: G240_M08_featureCounts.out [2024-12-20 09:30:18,594] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: G240_M08_featureCounts.out [2024-12-20 09:30:18,594] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: G240_M08_featureCounts.out [2024-12-20 09:30:18,615] multiqc [DEBUG ] File ignored by stacks/sumstats because it exceeded search pattern filesize limit: G240_M08_featureCounts.out [2024-12-20 09:30:19,501] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G240_M08_metrics [2024-12-20 09:30:19,503] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G240_M08_metrics [2024-12-20 09:30:19,506] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G240_M08_metrics [2024-12-20 09:30:19,537] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G240_M05_CKDL240041412-1A_22TG7VLT3_L4_2.fq.gz [2024-12-20 09:30:19,539] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G240_M05_CKDL240041412-1A_22TG7VLT3_L4_1.fq.gz [2024-12-20 09:30:19,553] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G240_M05_primary_unique.bam.bai [2024-12-20 09:30:19,620] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G240_M05_SJ.out.tab [2024-12-20 09:30:19,622] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G240_M05_SJ.out.tab [2024-12-20 09:30:19,622] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G240_M05_SJ.out.tab [2024-12-20 09:30:19,622] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G240_M05_SJ.out.tab [2024-12-20 09:30:19,626] multiqc [DEBUG ] File ignored by vep/vep_html because it exceeded search pattern filesize limit: G240_M05_SJ.out.tab [2024-12-20 09:30:19,626] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G240_M05_SJ.out.tab [2024-12-20 09:30:19,626] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G240_M05_SJ.out.tab [2024-12-20 09:30:19,626] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: G240_M05_SJ.out.tab [2024-12-20 09:30:19,626] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: G240_M05_SJ.out.tab [2024-12-20 09:30:19,626] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: G240_M05_SJ.out.tab [2024-12-20 09:30:19,626] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: G240_M05_SJ.out.tab [2024-12-20 09:30:19,626] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: G240_M05_SJ.out.tab [2024-12-20 09:30:19,626] multiqc [DEBUG ] File ignored by snpeff because it exceeded search pattern filesize limit: G240_M05_SJ.out.tab [2024-12-20 09:30:19,626] multiqc [DEBUG ] File ignored by stacks/sumstats because it exceeded search pattern filesize limit: G240_M05_SJ.out.tab [2024-12-20 09:30:21,458] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G240_M05_primary_unique.bam [2024-12-20 09:30:21,489] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G240_M05_marked_dup_metrics.txt [2024-12-20 09:30:21,492] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G240_M05_marked_dup_metrics.txt [2024-12-20 09:30:21,492] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G240_M05_marked_dup_metrics.txt [2024-12-20 09:30:21,492] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G240_M05_marked_dup_metrics.txt [2024-12-20 09:30:21,497] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G240_M05_marked_dup_metrics.txt [2024-12-20 09:30:21,509] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G240_M05_hist.pdf [2024-12-20 09:30:21,525] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G240_M05_metrics [2024-12-20 09:30:21,528] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G240_M05_metrics [2024-12-20 09:30:21,528] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G240_M05_metrics [2024-12-20 09:30:21,528] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G240_M05_metrics [2024-12-20 09:30:21,533] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G240_M05_metrics [2024-12-20 09:30:21,638] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G240_M05_featureCounts.out [2024-12-20 09:30:21,641] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G240_M05_featureCounts.out [2024-12-20 09:30:21,641] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G240_M05_featureCounts.out [2024-12-20 09:30:21,641] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G240_M05_featureCounts.out [2024-12-20 09:30:21,646] multiqc [DEBUG ] File ignored by vep/vep_html because it exceeded search pattern filesize limit: G240_M05_featureCounts.out [2024-12-20 09:30:21,646] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G240_M05_featureCounts.out [2024-12-20 09:30:21,646] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G240_M05_featureCounts.out [2024-12-20 09:30:21,646] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: G240_M05_featureCounts.out [2024-12-20 09:30:21,646] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: G240_M05_featureCounts.out [2024-12-20 09:30:21,646] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: G240_M05_featureCounts.out [2024-12-20 09:30:21,646] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: G240_M05_featureCounts.out [2024-12-20 09:30:21,646] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: G240_M05_featureCounts.out [2024-12-20 09:30:21,666] multiqc [DEBUG ] File ignored by stacks/sumstats because it exceeded search pattern filesize limit: G240_M05_featureCounts.out [2024-12-20 09:30:22,579] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G240_M05_featureCounts.out [2024-12-20 09:30:22,581] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G240_M05_featureCounts.out [2024-12-20 09:30:22,581] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G240_M05_featureCounts.out [2024-12-20 09:30:22,581] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G240_M05_featureCounts.out [2024-12-20 09:30:22,586] multiqc [DEBUG ] File ignored by vep/vep_html because it exceeded search pattern filesize limit: G240_M05_featureCounts.out [2024-12-20 09:30:22,586] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G240_M05_featureCounts.out [2024-12-20 09:30:22,586] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G240_M05_featureCounts.out [2024-12-20 09:30:22,586] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: G240_M05_featureCounts.out [2024-12-20 09:30:22,586] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: G240_M05_featureCounts.out [2024-12-20 09:30:22,586] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: G240_M05_featureCounts.out [2024-12-20 09:30:22,586] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: G240_M05_featureCounts.out [2024-12-20 09:30:22,586] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: G240_M05_featureCounts.out [2024-12-20 09:30:22,611] multiqc [DEBUG ] File ignored by stacks/sumstats because it exceeded search pattern filesize limit: G240_M05_featureCounts.out [2024-12-20 09:30:23,511] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G240_M05_metrics [2024-12-20 09:30:23,514] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G240_M05_metrics [2024-12-20 09:30:23,518] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G240_M05_metrics [2024-12-20 09:30:23,555] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G240_M37_CKDL240041412-1A_22TG7VLT3_L4_2.fq.gz [2024-12-20 09:30:23,558] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G240_M37_CKDL240041412-1A_22TG7VLT3_L4_1.fq.gz [2024-12-20 09:30:23,578] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G240_M37_primary_unique.bam.bai [2024-12-20 09:30:23,592] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G240_M37_primary_unique.bam [2024-12-20 09:30:23,620] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G240_M37_SJ.out.tab [2024-12-20 09:30:23,622] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G240_M37_SJ.out.tab [2024-12-20 09:30:23,623] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G240_M37_SJ.out.tab [2024-12-20 09:30:23,623] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G240_M37_SJ.out.tab [2024-12-20 09:30:23,627] multiqc [DEBUG ] File ignored by vep/vep_html because it exceeded search pattern filesize limit: G240_M37_SJ.out.tab [2024-12-20 09:30:23,627] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G240_M37_SJ.out.tab [2024-12-20 09:30:23,627] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G240_M37_SJ.out.tab [2024-12-20 09:30:23,628] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: G240_M37_SJ.out.tab [2024-12-20 09:30:23,628] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: G240_M37_SJ.out.tab [2024-12-20 09:30:23,628] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: G240_M37_SJ.out.tab [2024-12-20 09:30:23,628] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: G240_M37_SJ.out.tab [2024-12-20 09:30:23,628] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: G240_M37_SJ.out.tab [2024-12-20 09:30:23,628] multiqc [DEBUG ] File ignored by snpeff because it exceeded search pattern filesize limit: G240_M37_SJ.out.tab [2024-12-20 09:30:23,628] multiqc [DEBUG ] File ignored by stacks/sumstats because it exceeded search pattern filesize limit: G240_M37_SJ.out.tab [2024-12-20 09:30:26,168] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G240_M37_marked_dup_metrics.txt [2024-12-20 09:30:26,170] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G240_M37_marked_dup_metrics.txt [2024-12-20 09:30:26,170] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G240_M37_marked_dup_metrics.txt [2024-12-20 09:30:26,171] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G240_M37_marked_dup_metrics.txt [2024-12-20 09:30:26,174] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G240_M37_marked_dup_metrics.txt [2024-12-20 09:30:26,193] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G240_M37_hist.pdf [2024-12-20 09:30:26,213] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G240_M37_metrics [2024-12-20 09:30:26,216] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G240_M37_metrics [2024-12-20 09:30:26,216] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G240_M37_metrics [2024-12-20 09:30:26,216] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G240_M37_metrics [2024-12-20 09:30:26,221] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G240_M37_metrics [2024-12-20 09:30:26,329] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G240_M37_featureCounts.out [2024-12-20 09:30:26,331] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G240_M37_featureCounts.out [2024-12-20 09:30:26,332] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G240_M37_featureCounts.out [2024-12-20 09:30:26,332] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G240_M37_featureCounts.out [2024-12-20 09:30:26,337] multiqc [DEBUG ] File ignored by vep/vep_html because it exceeded search pattern filesize limit: G240_M37_featureCounts.out [2024-12-20 09:30:26,337] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G240_M37_featureCounts.out [2024-12-20 09:30:26,337] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G240_M37_featureCounts.out [2024-12-20 09:30:26,337] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: G240_M37_featureCounts.out [2024-12-20 09:30:26,337] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: G240_M37_featureCounts.out [2024-12-20 09:30:26,337] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: G240_M37_featureCounts.out [2024-12-20 09:30:26,337] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: G240_M37_featureCounts.out [2024-12-20 09:30:26,337] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: G240_M37_featureCounts.out [2024-12-20 09:30:26,359] multiqc [DEBUG ] File ignored by stacks/sumstats because it exceeded search pattern filesize limit: G240_M37_featureCounts.out [2024-12-20 09:30:27,252] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G240_M37_featureCounts.out [2024-12-20 09:30:27,255] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G240_M37_featureCounts.out [2024-12-20 09:30:27,256] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G240_M37_featureCounts.out [2024-12-20 09:30:27,256] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G240_M37_featureCounts.out [2024-12-20 09:30:27,260] multiqc [DEBUG ] File ignored by vep/vep_html because it exceeded search pattern filesize limit: G240_M37_featureCounts.out [2024-12-20 09:30:27,260] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G240_M37_featureCounts.out [2024-12-20 09:30:27,260] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G240_M37_featureCounts.out [2024-12-20 09:30:27,260] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: G240_M37_featureCounts.out [2024-12-20 09:30:27,260] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: G240_M37_featureCounts.out [2024-12-20 09:30:27,260] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: G240_M37_featureCounts.out [2024-12-20 09:30:27,260] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: G240_M37_featureCounts.out [2024-12-20 09:30:27,260] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: G240_M37_featureCounts.out [2024-12-20 09:30:27,281] multiqc [DEBUG ] File ignored by stacks/sumstats because it exceeded search pattern filesize limit: G240_M37_featureCounts.out [2024-12-20 09:30:28,160] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G240_M37_metrics [2024-12-20 09:30:28,162] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G240_M37_metrics [2024-12-20 09:30:28,166] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G240_M37_metrics [2024-12-20 09:30:28,204] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G240_M28_CKDL240041412-1A_22TG7VLT3_L4_2.fq.gz [2024-12-20 09:30:28,207] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G240_M28_CKDL240041412-1A_22TG7VLT3_L4_1.fq.gz [2024-12-20 09:30:28,227] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G240_M28_primary_unique.bam.bai [2024-12-20 09:30:28,302] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G240_M28_SJ.out.tab [2024-12-20 09:30:28,305] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G240_M28_SJ.out.tab [2024-12-20 09:30:28,305] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G240_M28_SJ.out.tab [2024-12-20 09:30:28,305] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G240_M28_SJ.out.tab [2024-12-20 09:30:28,309] multiqc [DEBUG ] File ignored by vep/vep_html because it exceeded search pattern filesize limit: G240_M28_SJ.out.tab [2024-12-20 09:30:28,309] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G240_M28_SJ.out.tab [2024-12-20 09:30:28,310] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G240_M28_SJ.out.tab [2024-12-20 09:30:28,310] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: G240_M28_SJ.out.tab [2024-12-20 09:30:28,310] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: G240_M28_SJ.out.tab [2024-12-20 09:30:28,310] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: G240_M28_SJ.out.tab [2024-12-20 09:30:28,310] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: G240_M28_SJ.out.tab [2024-12-20 09:30:28,310] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: G240_M28_SJ.out.tab [2024-12-20 09:30:28,310] multiqc [DEBUG ] File ignored by snpeff because it exceeded search pattern filesize limit: G240_M28_SJ.out.tab [2024-12-20 09:30:28,310] multiqc [DEBUG ] File ignored by stacks/sumstats because it exceeded search pattern filesize limit: G240_M28_SJ.out.tab [2024-12-20 09:30:30,498] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G240_M28_primary_unique.bam [2024-12-20 09:30:30,519] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G240_M28_marked_dup_metrics.txt [2024-12-20 09:30:30,522] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G240_M28_marked_dup_metrics.txt [2024-12-20 09:30:30,522] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G240_M28_marked_dup_metrics.txt [2024-12-20 09:30:30,522] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G240_M28_marked_dup_metrics.txt [2024-12-20 09:30:30,527] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G240_M28_marked_dup_metrics.txt [2024-12-20 09:30:30,541] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G240_M28_hist.pdf [2024-12-20 09:30:30,554] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G240_M28_metrics [2024-12-20 09:30:30,556] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G240_M28_metrics [2024-12-20 09:30:30,557] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G240_M28_metrics [2024-12-20 09:30:30,557] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G240_M28_metrics [2024-12-20 09:30:30,562] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G240_M28_metrics [2024-12-20 09:30:30,670] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G240_M28_featureCounts.out [2024-12-20 09:30:30,672] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G240_M28_featureCounts.out [2024-12-20 09:30:30,673] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G240_M28_featureCounts.out [2024-12-20 09:30:30,673] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G240_M28_featureCounts.out [2024-12-20 09:30:30,678] multiqc [DEBUG ] File ignored by vep/vep_html because it exceeded search pattern filesize limit: G240_M28_featureCounts.out [2024-12-20 09:30:30,678] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G240_M28_featureCounts.out [2024-12-20 09:30:30,678] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G240_M28_featureCounts.out [2024-12-20 09:30:30,678] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: G240_M28_featureCounts.out [2024-12-20 09:30:30,678] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: G240_M28_featureCounts.out [2024-12-20 09:30:30,678] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: G240_M28_featureCounts.out [2024-12-20 09:30:30,678] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: G240_M28_featureCounts.out [2024-12-20 09:30:30,679] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: G240_M28_featureCounts.out [2024-12-20 09:30:30,699] multiqc [DEBUG ] File ignored by stacks/sumstats because it exceeded search pattern filesize limit: G240_M28_featureCounts.out [2024-12-20 09:30:31,587] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G240_M28_featureCounts.out [2024-12-20 09:30:31,588] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G240_M28_featureCounts.out [2024-12-20 09:30:31,589] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G240_M28_featureCounts.out [2024-12-20 09:30:31,589] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G240_M28_featureCounts.out [2024-12-20 09:30:31,592] multiqc [DEBUG ] File ignored by vep/vep_html because it exceeded search pattern filesize limit: G240_M28_featureCounts.out [2024-12-20 09:30:31,592] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G240_M28_featureCounts.out [2024-12-20 09:30:31,592] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G240_M28_featureCounts.out [2024-12-20 09:30:31,592] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: G240_M28_featureCounts.out [2024-12-20 09:30:31,592] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: G240_M28_featureCounts.out [2024-12-20 09:30:31,592] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: G240_M28_featureCounts.out [2024-12-20 09:30:31,592] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: G240_M28_featureCounts.out [2024-12-20 09:30:31,592] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: G240_M28_featureCounts.out [2024-12-20 09:30:31,612] multiqc [DEBUG ] File ignored by stacks/sumstats because it exceeded search pattern filesize limit: G240_M28_featureCounts.out [2024-12-20 09:30:32,466] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G240_M28_metrics [2024-12-20 09:30:32,468] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G240_M28_metrics [2024-12-20 09:30:32,471] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G240_M28_metrics [2024-12-20 09:30:32,512] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G240_M25_CKDL240041412-1A_22TG7VLT3_L4_2.fq.gz [2024-12-20 09:30:32,515] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G240_M25_CKDL240041412-1A_22TG7VLT3_L4_1.fq.gz [2024-12-20 09:30:32,534] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G240_M25_primary_unique.bam.bai [2024-12-20 09:30:32,612] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G240_M25_SJ.out.tab [2024-12-20 09:30:32,615] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G240_M25_SJ.out.tab [2024-12-20 09:30:32,615] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G240_M25_SJ.out.tab [2024-12-20 09:30:32,615] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G240_M25_SJ.out.tab [2024-12-20 09:30:32,619] multiqc [DEBUG ] File ignored by vep/vep_html because it exceeded search pattern filesize limit: G240_M25_SJ.out.tab [2024-12-20 09:30:32,619] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G240_M25_SJ.out.tab [2024-12-20 09:30:32,620] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G240_M25_SJ.out.tab [2024-12-20 09:30:32,620] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: G240_M25_SJ.out.tab [2024-12-20 09:30:32,620] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: G240_M25_SJ.out.tab [2024-12-20 09:30:32,620] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: G240_M25_SJ.out.tab [2024-12-20 09:30:32,620] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: G240_M25_SJ.out.tab [2024-12-20 09:30:32,620] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: G240_M25_SJ.out.tab [2024-12-20 09:30:32,620] multiqc [DEBUG ] File ignored by snpeff because it exceeded search pattern filesize limit: G240_M25_SJ.out.tab [2024-12-20 09:30:32,620] multiqc [DEBUG ] File ignored by stacks/sumstats because it exceeded search pattern filesize limit: G240_M25_SJ.out.tab [2024-12-20 09:30:34,534] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G240_M25_primary_unique.bam [2024-12-20 09:30:34,553] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G240_M25_marked_dup_metrics.txt [2024-12-20 09:30:34,555] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G240_M25_marked_dup_metrics.txt [2024-12-20 09:30:34,556] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G240_M25_marked_dup_metrics.txt [2024-12-20 09:30:34,556] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G240_M25_marked_dup_metrics.txt [2024-12-20 09:30:34,561] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G240_M25_marked_dup_metrics.txt [2024-12-20 09:30:34,574] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G240_M25_hist.pdf [2024-12-20 09:30:34,592] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G240_M25_metrics [2024-12-20 09:30:34,595] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G240_M25_metrics [2024-12-20 09:30:34,595] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G240_M25_metrics [2024-12-20 09:30:34,595] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G240_M25_metrics [2024-12-20 09:30:34,600] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G240_M25_metrics [2024-12-20 09:30:34,700] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G240_M25_featureCounts.out [2024-12-20 09:30:34,704] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G240_M25_featureCounts.out [2024-12-20 09:30:34,704] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G240_M25_featureCounts.out [2024-12-20 09:30:34,704] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G240_M25_featureCounts.out [2024-12-20 09:30:34,708] multiqc [DEBUG ] File ignored by vep/vep_html because it exceeded search pattern filesize limit: G240_M25_featureCounts.out [2024-12-20 09:30:34,708] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G240_M25_featureCounts.out [2024-12-20 09:30:34,708] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G240_M25_featureCounts.out [2024-12-20 09:30:34,709] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: G240_M25_featureCounts.out [2024-12-20 09:30:34,709] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: G240_M25_featureCounts.out [2024-12-20 09:30:34,709] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: G240_M25_featureCounts.out [2024-12-20 09:30:34,709] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: G240_M25_featureCounts.out [2024-12-20 09:30:34,709] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: G240_M25_featureCounts.out [2024-12-20 09:30:34,730] multiqc [DEBUG ] File ignored by stacks/sumstats because it exceeded search pattern filesize limit: G240_M25_featureCounts.out [2024-12-20 09:30:35,636] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G240_M25_featureCounts.out [2024-12-20 09:30:35,639] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G240_M25_featureCounts.out [2024-12-20 09:30:35,652] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G240_M25_featureCounts.out [2024-12-20 09:30:35,652] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G240_M25_featureCounts.out [2024-12-20 09:30:35,657] multiqc [DEBUG ] File ignored by vep/vep_html because it exceeded search pattern filesize limit: G240_M25_featureCounts.out [2024-12-20 09:30:35,657] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G240_M25_featureCounts.out [2024-12-20 09:30:35,657] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G240_M25_featureCounts.out [2024-12-20 09:30:35,657] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: G240_M25_featureCounts.out [2024-12-20 09:30:35,657] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: G240_M25_featureCounts.out [2024-12-20 09:30:35,657] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: G240_M25_featureCounts.out [2024-12-20 09:30:35,657] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: G240_M25_featureCounts.out [2024-12-20 09:30:35,657] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: G240_M25_featureCounts.out [2024-12-20 09:30:35,683] multiqc [DEBUG ] File ignored by stacks/sumstats because it exceeded search pattern filesize limit: G240_M25_featureCounts.out [2024-12-20 09:30:36,554] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G240_M25_metrics [2024-12-20 09:30:36,556] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G240_M25_metrics [2024-12-20 09:30:36,560] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G240_M25_metrics [2024-12-20 09:30:36,598] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G240_M16_CKDL240041412-1A_22TG7VLT3_L4_1.fq.gz [2024-12-20 09:30:36,601] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G240_M16_CKDL240041412-1A_22TG7VLT3_L4_2.fq.gz [2024-12-20 09:30:36,670] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G240_M16_primary_unique.bam [2024-12-20 09:30:36,718] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G240_M16_SJ.out.tab [2024-12-20 09:30:36,720] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G240_M16_SJ.out.tab [2024-12-20 09:30:36,721] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G240_M16_SJ.out.tab [2024-12-20 09:30:36,721] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G240_M16_SJ.out.tab [2024-12-20 09:30:36,726] multiqc [DEBUG ] File ignored by vep/vep_html because it exceeded search pattern filesize limit: G240_M16_SJ.out.tab [2024-12-20 09:30:36,726] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G240_M16_SJ.out.tab [2024-12-20 09:30:36,726] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G240_M16_SJ.out.tab [2024-12-20 09:30:36,726] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: G240_M16_SJ.out.tab [2024-12-20 09:30:36,726] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: G240_M16_SJ.out.tab [2024-12-20 09:30:36,726] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: G240_M16_SJ.out.tab [2024-12-20 09:30:36,726] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: G240_M16_SJ.out.tab [2024-12-20 09:30:36,726] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: G240_M16_SJ.out.tab [2024-12-20 09:30:36,726] multiqc [DEBUG ] File ignored by snpeff because it exceeded search pattern filesize limit: G240_M16_SJ.out.tab [2024-12-20 09:30:36,726] multiqc [DEBUG ] File ignored by stacks/sumstats because it exceeded search pattern filesize limit: G240_M16_SJ.out.tab [2024-12-20 09:30:39,173] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G240_M16_primary_unique.bam.bai [2024-12-20 09:30:39,193] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G240_M16_marked_dup_metrics.txt [2024-12-20 09:30:39,196] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G240_M16_marked_dup_metrics.txt [2024-12-20 09:30:39,197] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G240_M16_marked_dup_metrics.txt [2024-12-20 09:30:39,197] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G240_M16_marked_dup_metrics.txt [2024-12-20 09:30:39,202] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G240_M16_marked_dup_metrics.txt [2024-12-20 09:30:39,230] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G240_M16_metrics [2024-12-20 09:30:39,232] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G240_M16_metrics [2024-12-20 09:30:39,232] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G240_M16_metrics [2024-12-20 09:30:39,232] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G240_M16_metrics [2024-12-20 09:30:39,235] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G240_M16_metrics [2024-12-20 09:30:39,291] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G240_M16_hist.pdf [2024-12-20 09:30:39,316] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G240_M16_featureCounts.out [2024-12-20 09:30:39,319] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G240_M16_featureCounts.out [2024-12-20 09:30:39,319] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G240_M16_featureCounts.out [2024-12-20 09:30:39,319] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G240_M16_featureCounts.out [2024-12-20 09:30:39,324] multiqc [DEBUG ] File ignored by vep/vep_html because it exceeded search pattern filesize limit: G240_M16_featureCounts.out [2024-12-20 09:30:39,324] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G240_M16_featureCounts.out [2024-12-20 09:30:39,324] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G240_M16_featureCounts.out [2024-12-20 09:30:39,324] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: G240_M16_featureCounts.out [2024-12-20 09:30:39,324] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: G240_M16_featureCounts.out [2024-12-20 09:30:39,324] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: G240_M16_featureCounts.out [2024-12-20 09:30:39,324] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: G240_M16_featureCounts.out [2024-12-20 09:30:39,324] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: G240_M16_featureCounts.out [2024-12-20 09:30:39,345] multiqc [DEBUG ] File ignored by stacks/sumstats because it exceeded search pattern filesize limit: G240_M16_featureCounts.out [2024-12-20 09:30:40,251] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G240_M16_featureCounts.out [2024-12-20 09:30:40,253] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G240_M16_featureCounts.out [2024-12-20 09:30:40,254] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G240_M16_featureCounts.out [2024-12-20 09:30:40,254] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G240_M16_featureCounts.out [2024-12-20 09:30:40,259] multiqc [DEBUG ] File ignored by vep/vep_html because it exceeded search pattern filesize limit: G240_M16_featureCounts.out [2024-12-20 09:30:40,259] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G240_M16_featureCounts.out [2024-12-20 09:30:40,259] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G240_M16_featureCounts.out [2024-12-20 09:30:40,259] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: G240_M16_featureCounts.out [2024-12-20 09:30:40,259] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: G240_M16_featureCounts.out [2024-12-20 09:30:40,259] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: G240_M16_featureCounts.out [2024-12-20 09:30:40,259] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: G240_M16_featureCounts.out [2024-12-20 09:30:40,260] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: G240_M16_featureCounts.out [2024-12-20 09:30:40,281] multiqc [DEBUG ] File ignored by stacks/sumstats because it exceeded search pattern filesize limit: G240_M16_featureCounts.out [2024-12-20 09:30:41,179] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G240_M16_metrics [2024-12-20 09:30:41,182] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G240_M16_metrics [2024-12-20 09:30:41,185] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G240_M16_metrics [2024-12-20 09:30:41,225] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G240_M22_CKDL240041412-1A_22TG7VLT3_L4_2.fq.gz [2024-12-20 09:30:41,228] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G240_M22_CKDL240041412-1A_22TG7VLT3_L4_1.fq.gz [2024-12-20 09:30:41,261] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G240_M22_primary_unique.bam.bai [2024-12-20 09:30:41,262] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G240_M22_primary_unique.bam [2024-12-20 09:30:41,342] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G240_M22_SJ.out.tab [2024-12-20 09:30:41,345] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G240_M22_SJ.out.tab [2024-12-20 09:30:41,345] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G240_M22_SJ.out.tab [2024-12-20 09:30:41,345] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G240_M22_SJ.out.tab [2024-12-20 09:30:41,350] multiqc [DEBUG ] File ignored by vep/vep_html because it exceeded search pattern filesize limit: G240_M22_SJ.out.tab [2024-12-20 09:30:41,350] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G240_M22_SJ.out.tab [2024-12-20 09:30:41,350] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G240_M22_SJ.out.tab [2024-12-20 09:30:41,351] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: G240_M22_SJ.out.tab [2024-12-20 09:30:41,351] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: G240_M22_SJ.out.tab [2024-12-20 09:30:41,351] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: G240_M22_SJ.out.tab [2024-12-20 09:30:41,351] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: G240_M22_SJ.out.tab [2024-12-20 09:30:41,351] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: G240_M22_SJ.out.tab [2024-12-20 09:30:41,351] multiqc [DEBUG ] File ignored by snpeff because it exceeded search pattern filesize limit: G240_M22_SJ.out.tab [2024-12-20 09:30:41,351] multiqc [DEBUG ] File ignored by stacks/sumstats because it exceeded search pattern filesize limit: G240_M22_SJ.out.tab [2024-12-20 09:30:43,341] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G240_M22_marked_dup_metrics.txt [2024-12-20 09:30:43,344] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G240_M22_marked_dup_metrics.txt [2024-12-20 09:30:43,344] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G240_M22_marked_dup_metrics.txt [2024-12-20 09:30:43,344] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G240_M22_marked_dup_metrics.txt [2024-12-20 09:30:43,350] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G240_M22_marked_dup_metrics.txt [2024-12-20 09:30:43,391] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G240_M22_metrics [2024-12-20 09:30:43,393] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G240_M22_metrics [2024-12-20 09:30:43,394] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G240_M22_metrics [2024-12-20 09:30:43,394] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G240_M22_metrics [2024-12-20 09:30:43,399] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G240_M22_metrics [2024-12-20 09:30:43,491] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G240_M22_hist.pdf [2024-12-20 09:30:43,540] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G240_M22_featureCounts.out [2024-12-20 09:30:43,543] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G240_M22_featureCounts.out [2024-12-20 09:30:43,543] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G240_M22_featureCounts.out [2024-12-20 09:30:43,543] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G240_M22_featureCounts.out [2024-12-20 09:30:43,549] multiqc [DEBUG ] File ignored by vep/vep_html because it exceeded search pattern filesize limit: G240_M22_featureCounts.out [2024-12-20 09:30:43,549] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G240_M22_featureCounts.out [2024-12-20 09:30:43,549] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G240_M22_featureCounts.out [2024-12-20 09:30:43,549] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: G240_M22_featureCounts.out [2024-12-20 09:30:43,549] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: G240_M22_featureCounts.out [2024-12-20 09:30:43,549] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: G240_M22_featureCounts.out [2024-12-20 09:30:43,549] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: G240_M22_featureCounts.out [2024-12-20 09:30:43,549] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: G240_M22_featureCounts.out [2024-12-20 09:30:43,571] multiqc [DEBUG ] File ignored by stacks/sumstats because it exceeded search pattern filesize limit: G240_M22_featureCounts.out [2024-12-20 09:30:44,469] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G240_M22_featureCounts.out [2024-12-20 09:30:44,472] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G240_M22_featureCounts.out [2024-12-20 09:30:44,472] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G240_M22_featureCounts.out [2024-12-20 09:30:44,472] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G240_M22_featureCounts.out [2024-12-20 09:30:44,477] multiqc [DEBUG ] File ignored by vep/vep_html because it exceeded search pattern filesize limit: G240_M22_featureCounts.out [2024-12-20 09:30:44,477] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G240_M22_featureCounts.out [2024-12-20 09:30:44,477] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G240_M22_featureCounts.out [2024-12-20 09:30:44,478] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: G240_M22_featureCounts.out [2024-12-20 09:30:44,478] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: G240_M22_featureCounts.out [2024-12-20 09:30:44,478] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: G240_M22_featureCounts.out [2024-12-20 09:30:44,478] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: G240_M22_featureCounts.out [2024-12-20 09:30:44,478] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: G240_M22_featureCounts.out [2024-12-20 09:30:44,501] multiqc [DEBUG ] File ignored by stacks/sumstats because it exceeded search pattern filesize limit: G240_M22_featureCounts.out [2024-12-20 09:30:45,377] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G240_M22_metrics [2024-12-20 09:30:45,379] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G240_M22_metrics [2024-12-20 09:30:45,382] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G240_M22_metrics [2024-12-20 09:30:45,422] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G240_M13_CKDL240041412-1A_22TG7VLT3_L4_2.fq.gz [2024-12-20 09:30:45,425] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G240_M13_CKDL240041412-1A_22TG7VLT3_L4_1.fq.gz [2024-12-20 09:30:45,462] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G240_M13_primary_unique.bam [2024-12-20 09:30:45,539] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G240_M13_SJ.out.tab [2024-12-20 09:30:45,542] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G240_M13_SJ.out.tab [2024-12-20 09:30:45,542] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G240_M13_SJ.out.tab [2024-12-20 09:30:45,542] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G240_M13_SJ.out.tab [2024-12-20 09:30:45,549] multiqc [DEBUG ] File ignored by vep/vep_html because it exceeded search pattern filesize limit: G240_M13_SJ.out.tab [2024-12-20 09:30:45,549] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G240_M13_SJ.out.tab [2024-12-20 09:30:45,550] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G240_M13_SJ.out.tab [2024-12-20 09:30:45,550] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: G240_M13_SJ.out.tab [2024-12-20 09:30:45,550] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: G240_M13_SJ.out.tab [2024-12-20 09:30:45,550] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: G240_M13_SJ.out.tab [2024-12-20 09:30:45,550] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: G240_M13_SJ.out.tab [2024-12-20 09:30:45,550] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: G240_M13_SJ.out.tab [2024-12-20 09:30:45,550] multiqc [DEBUG ] File ignored by snpeff because it exceeded search pattern filesize limit: G240_M13_SJ.out.tab [2024-12-20 09:30:45,550] multiqc [DEBUG ] File ignored by stacks/sumstats because it exceeded search pattern filesize limit: G240_M13_SJ.out.tab [2024-12-20 09:30:47,592] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G240_M13_primary_unique.bam.bai [2024-12-20 09:30:47,611] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G240_M13_marked_dup_metrics.txt [2024-12-20 09:30:47,614] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G240_M13_marked_dup_metrics.txt [2024-12-20 09:30:47,615] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G240_M13_marked_dup_metrics.txt [2024-12-20 09:30:47,615] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G240_M13_marked_dup_metrics.txt [2024-12-20 09:30:47,619] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G240_M13_marked_dup_metrics.txt [2024-12-20 09:30:47,641] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G240_M13_hist.pdf [2024-12-20 09:30:47,664] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G240_M13_metrics [2024-12-20 09:30:47,668] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G240_M13_metrics [2024-12-20 09:30:47,669] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G240_M13_metrics [2024-12-20 09:30:47,669] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G240_M13_metrics [2024-12-20 09:30:47,674] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G240_M13_metrics [2024-12-20 09:30:47,757] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G240_M13_featureCounts.out [2024-12-20 09:30:47,760] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G240_M13_featureCounts.out [2024-12-20 09:30:47,760] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G240_M13_featureCounts.out [2024-12-20 09:30:47,760] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G240_M13_featureCounts.out [2024-12-20 09:30:47,765] multiqc [DEBUG ] File ignored by vep/vep_html because it exceeded search pattern filesize limit: G240_M13_featureCounts.out [2024-12-20 09:30:47,765] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G240_M13_featureCounts.out [2024-12-20 09:30:47,765] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G240_M13_featureCounts.out [2024-12-20 09:30:47,766] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: G240_M13_featureCounts.out [2024-12-20 09:30:47,766] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: G240_M13_featureCounts.out [2024-12-20 09:30:47,766] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: G240_M13_featureCounts.out [2024-12-20 09:30:47,766] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: G240_M13_featureCounts.out [2024-12-20 09:30:47,766] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: G240_M13_featureCounts.out [2024-12-20 09:30:47,788] multiqc [DEBUG ] File ignored by stacks/sumstats because it exceeded search pattern filesize limit: G240_M13_featureCounts.out [2024-12-20 09:30:48,700] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G240_M13_featureCounts.out [2024-12-20 09:30:48,703] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G240_M13_featureCounts.out [2024-12-20 09:30:48,703] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G240_M13_featureCounts.out [2024-12-20 09:30:48,703] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G240_M13_featureCounts.out [2024-12-20 09:30:48,708] multiqc [DEBUG ] File ignored by vep/vep_html because it exceeded search pattern filesize limit: G240_M13_featureCounts.out [2024-12-20 09:30:48,708] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G240_M13_featureCounts.out [2024-12-20 09:30:48,708] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G240_M13_featureCounts.out [2024-12-20 09:30:48,708] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: G240_M13_featureCounts.out [2024-12-20 09:30:48,708] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: G240_M13_featureCounts.out [2024-12-20 09:30:48,708] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: G240_M13_featureCounts.out [2024-12-20 09:30:48,708] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: G240_M13_featureCounts.out [2024-12-20 09:30:48,708] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: G240_M13_featureCounts.out [2024-12-20 09:30:48,728] multiqc [DEBUG ] File ignored by stacks/sumstats because it exceeded search pattern filesize limit: G240_M13_featureCounts.out [2024-12-20 09:30:49,610] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G240_M13_metrics [2024-12-20 09:30:49,613] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G240_M13_metrics [2024-12-20 09:30:49,616] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G240_M13_metrics [2024-12-20 09:30:49,660] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G240_M09_CKDL240041412-1A_22TG7VLT3_L4_1.fq.gz [2024-12-20 09:30:49,662] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G240_M09_CKDL240041412-1A_22TG7VLT3_L4_2.fq.gz [2024-12-20 09:30:49,679] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G240_M09_primary_unique.bam [2024-12-20 09:30:49,695] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G240_M09_primary_unique.bam.bai [2024-12-20 09:30:49,742] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G240_M09_SJ.out.tab [2024-12-20 09:30:49,744] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G240_M09_SJ.out.tab [2024-12-20 09:30:49,745] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G240_M09_SJ.out.tab [2024-12-20 09:30:49,745] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G240_M09_SJ.out.tab [2024-12-20 09:30:49,749] multiqc [DEBUG ] File ignored by vep/vep_html because it exceeded search pattern filesize limit: G240_M09_SJ.out.tab [2024-12-20 09:30:49,749] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G240_M09_SJ.out.tab [2024-12-20 09:30:49,749] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G240_M09_SJ.out.tab [2024-12-20 09:30:49,749] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: G240_M09_SJ.out.tab [2024-12-20 09:30:49,749] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: G240_M09_SJ.out.tab [2024-12-20 09:30:49,750] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: G240_M09_SJ.out.tab [2024-12-20 09:30:49,750] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: G240_M09_SJ.out.tab [2024-12-20 09:30:49,750] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: G240_M09_SJ.out.tab [2024-12-20 09:30:49,750] multiqc [DEBUG ] File ignored by snpeff because it exceeded search pattern filesize limit: G240_M09_SJ.out.tab [2024-12-20 09:30:49,750] multiqc [DEBUG ] File ignored by stacks/sumstats because it exceeded search pattern filesize limit: G240_M09_SJ.out.tab [2024-12-20 09:30:52,145] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G240_M09_marked_dup_metrics.txt [2024-12-20 09:30:52,149] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G240_M09_marked_dup_metrics.txt [2024-12-20 09:30:52,149] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G240_M09_marked_dup_metrics.txt [2024-12-20 09:30:52,149] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G240_M09_marked_dup_metrics.txt [2024-12-20 09:30:52,155] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G240_M09_marked_dup_metrics.txt [2024-12-20 09:30:52,170] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G240_M09_hist.pdf [2024-12-20 09:30:52,191] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G240_M09_metrics [2024-12-20 09:30:52,193] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G240_M09_metrics [2024-12-20 09:30:52,194] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G240_M09_metrics [2024-12-20 09:30:52,194] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G240_M09_metrics [2024-12-20 09:30:52,199] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G240_M09_metrics [2024-12-20 09:30:52,271] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G240_M09_featureCounts.out [2024-12-20 09:30:52,274] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G240_M09_featureCounts.out [2024-12-20 09:30:52,274] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G240_M09_featureCounts.out [2024-12-20 09:30:52,274] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G240_M09_featureCounts.out [2024-12-20 09:30:52,279] multiqc [DEBUG ] File ignored by vep/vep_html because it exceeded search pattern filesize limit: G240_M09_featureCounts.out [2024-12-20 09:30:52,279] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G240_M09_featureCounts.out [2024-12-20 09:30:52,279] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G240_M09_featureCounts.out [2024-12-20 09:30:52,279] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: G240_M09_featureCounts.out [2024-12-20 09:30:52,280] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: G240_M09_featureCounts.out [2024-12-20 09:30:52,280] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: G240_M09_featureCounts.out [2024-12-20 09:30:52,280] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: G240_M09_featureCounts.out [2024-12-20 09:30:52,280] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: G240_M09_featureCounts.out [2024-12-20 09:30:52,301] multiqc [DEBUG ] File ignored by stacks/sumstats because it exceeded search pattern filesize limit: G240_M09_featureCounts.out [2024-12-20 09:30:53,223] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G240_M09_featureCounts.out [2024-12-20 09:30:53,226] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G240_M09_featureCounts.out [2024-12-20 09:30:53,235] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G240_M09_featureCounts.out [2024-12-20 09:30:53,235] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G240_M09_featureCounts.out [2024-12-20 09:30:53,239] multiqc [DEBUG ] File ignored by vep/vep_html because it exceeded search pattern filesize limit: G240_M09_featureCounts.out [2024-12-20 09:30:53,239] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G240_M09_featureCounts.out [2024-12-20 09:30:53,239] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G240_M09_featureCounts.out [2024-12-20 09:30:53,240] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: G240_M09_featureCounts.out [2024-12-20 09:30:53,240] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: G240_M09_featureCounts.out [2024-12-20 09:30:53,240] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: G240_M09_featureCounts.out [2024-12-20 09:30:53,240] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: G240_M09_featureCounts.out [2024-12-20 09:30:53,240] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: G240_M09_featureCounts.out [2024-12-20 09:30:53,265] multiqc [DEBUG ] File ignored by stacks/sumstats because it exceeded search pattern filesize limit: G240_M09_featureCounts.out [2024-12-20 09:30:54,125] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G240_M09_metrics [2024-12-20 09:30:54,127] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G240_M09_metrics [2024-12-20 09:30:54,130] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G240_M09_metrics [2024-12-20 09:30:54,172] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G240_M10_CKDL240041412-1A_22TG7VLT3_L4_2.fq.gz [2024-12-20 09:30:54,175] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G240_M10_CKDL240041412-1A_22TG7VLT3_L4_1.fq.gz [2024-12-20 09:30:54,221] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G240_M10_SJ.out.tab [2024-12-20 09:30:54,223] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G240_M10_SJ.out.tab [2024-12-20 09:30:54,224] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G240_M10_SJ.out.tab [2024-12-20 09:30:54,224] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G240_M10_SJ.out.tab [2024-12-20 09:30:54,229] multiqc [DEBUG ] File ignored by vep/vep_html because it exceeded search pattern filesize limit: G240_M10_SJ.out.tab [2024-12-20 09:30:54,229] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G240_M10_SJ.out.tab [2024-12-20 09:30:54,229] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G240_M10_SJ.out.tab [2024-12-20 09:30:54,229] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: G240_M10_SJ.out.tab [2024-12-20 09:30:54,229] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: G240_M10_SJ.out.tab [2024-12-20 09:30:54,229] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: G240_M10_SJ.out.tab [2024-12-20 09:30:54,229] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: G240_M10_SJ.out.tab [2024-12-20 09:30:54,229] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: G240_M10_SJ.out.tab [2024-12-20 09:30:54,229] multiqc [DEBUG ] File ignored by snpeff because it exceeded search pattern filesize limit: G240_M10_SJ.out.tab [2024-12-20 09:30:54,229] multiqc [DEBUG ] File ignored by stacks/sumstats because it exceeded search pattern filesize limit: G240_M10_SJ.out.tab [2024-12-20 09:30:56,338] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G240_M10_primary_unique.bam [2024-12-20 09:30:56,372] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G240_M10_primary_unique.bam.bai [2024-12-20 09:30:56,418] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G240_M10_marked_dup_metrics.txt [2024-12-20 09:30:56,420] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G240_M10_marked_dup_metrics.txt [2024-12-20 09:30:56,421] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G240_M10_marked_dup_metrics.txt [2024-12-20 09:30:56,421] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G240_M10_marked_dup_metrics.txt [2024-12-20 09:30:56,426] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G240_M10_marked_dup_metrics.txt [2024-12-20 09:30:56,439] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G240_M10_hist.pdf [2024-12-20 09:30:56,452] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G240_M10_metrics [2024-12-20 09:30:56,454] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G240_M10_metrics [2024-12-20 09:30:56,455] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G240_M10_metrics [2024-12-20 09:30:56,455] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G240_M10_metrics [2024-12-20 09:30:56,460] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G240_M10_metrics [2024-12-20 09:30:56,550] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G240_M10_featureCounts.out [2024-12-20 09:30:56,553] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G240_M10_featureCounts.out [2024-12-20 09:30:56,553] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G240_M10_featureCounts.out [2024-12-20 09:30:56,553] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G240_M10_featureCounts.out [2024-12-20 09:30:56,558] multiqc [DEBUG ] File ignored by vep/vep_html because it exceeded search pattern filesize limit: G240_M10_featureCounts.out [2024-12-20 09:30:56,558] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G240_M10_featureCounts.out [2024-12-20 09:30:56,558] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G240_M10_featureCounts.out [2024-12-20 09:30:56,559] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: G240_M10_featureCounts.out [2024-12-20 09:30:56,559] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: G240_M10_featureCounts.out [2024-12-20 09:30:56,559] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: G240_M10_featureCounts.out [2024-12-20 09:30:56,559] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: G240_M10_featureCounts.out [2024-12-20 09:30:56,559] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: G240_M10_featureCounts.out [2024-12-20 09:30:56,581] multiqc [DEBUG ] File ignored by stacks/sumstats because it exceeded search pattern filesize limit: G240_M10_featureCounts.out [2024-12-20 09:30:57,482] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G240_M10_featureCounts.out [2024-12-20 09:30:57,484] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G240_M10_featureCounts.out [2024-12-20 09:30:57,485] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G240_M10_featureCounts.out [2024-12-20 09:30:57,485] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G240_M10_featureCounts.out [2024-12-20 09:30:57,490] multiqc [DEBUG ] File ignored by vep/vep_html because it exceeded search pattern filesize limit: G240_M10_featureCounts.out [2024-12-20 09:30:57,490] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G240_M10_featureCounts.out [2024-12-20 09:30:57,490] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G240_M10_featureCounts.out [2024-12-20 09:30:57,490] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: G240_M10_featureCounts.out [2024-12-20 09:30:57,490] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: G240_M10_featureCounts.out [2024-12-20 09:30:57,490] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: G240_M10_featureCounts.out [2024-12-20 09:30:57,490] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: G240_M10_featureCounts.out [2024-12-20 09:30:57,490] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: G240_M10_featureCounts.out [2024-12-20 09:30:57,511] multiqc [DEBUG ] File ignored by stacks/sumstats because it exceeded search pattern filesize limit: G240_M10_featureCounts.out [2024-12-20 09:30:58,412] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G240_M10_metrics [2024-12-20 09:30:58,414] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G240_M10_metrics [2024-12-20 09:30:58,429] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G240_M10_metrics [2024-12-20 09:30:58,469] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G240_M01_CKDL240041412-1A_22TG7VLT3_L4_1.fq.gz [2024-12-20 09:30:58,472] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G240_M01_CKDL240041412-1A_22TG7VLT3_L4_2.fq.gz [2024-12-20 09:30:58,540] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G240_M01_primary_unique.bam [2024-12-20 09:30:58,541] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G240_M01_primary_unique.bam.bai [2024-12-20 09:30:58,583] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G240_M01_SJ.out.tab [2024-12-20 09:30:58,586] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G240_M01_SJ.out.tab [2024-12-20 09:30:58,586] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G240_M01_SJ.out.tab [2024-12-20 09:30:58,586] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G240_M01_SJ.out.tab [2024-12-20 09:30:58,591] multiqc [DEBUG ] File ignored by vep/vep_html because it exceeded search pattern filesize limit: G240_M01_SJ.out.tab [2024-12-20 09:30:58,591] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G240_M01_SJ.out.tab [2024-12-20 09:30:58,591] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G240_M01_SJ.out.tab [2024-12-20 09:30:58,591] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: G240_M01_SJ.out.tab [2024-12-20 09:30:58,591] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: G240_M01_SJ.out.tab [2024-12-20 09:30:58,591] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: G240_M01_SJ.out.tab [2024-12-20 09:30:58,591] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: G240_M01_SJ.out.tab [2024-12-20 09:30:58,591] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: G240_M01_SJ.out.tab [2024-12-20 09:30:58,591] multiqc [DEBUG ] File ignored by snpeff because it exceeded search pattern filesize limit: G240_M01_SJ.out.tab [2024-12-20 09:30:58,591] multiqc [DEBUG ] File ignored by stacks/sumstats because it exceeded search pattern filesize limit: G240_M01_SJ.out.tab [2024-12-20 09:31:00,772] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G240_M01_marked_dup_metrics.txt [2024-12-20 09:31:00,775] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G240_M01_marked_dup_metrics.txt [2024-12-20 09:31:00,775] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G240_M01_marked_dup_metrics.txt [2024-12-20 09:31:00,775] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G240_M01_marked_dup_metrics.txt [2024-12-20 09:31:00,779] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G240_M01_marked_dup_metrics.txt [2024-12-20 09:31:00,795] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G240_M01_hist.pdf [2024-12-20 09:31:00,810] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G240_M01_metrics [2024-12-20 09:31:00,812] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G240_M01_metrics [2024-12-20 09:31:00,812] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G240_M01_metrics [2024-12-20 09:31:00,812] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G240_M01_metrics [2024-12-20 09:31:00,817] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G240_M01_metrics [2024-12-20 09:31:00,932] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G240_M01_featureCounts.out [2024-12-20 09:31:00,935] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G240_M01_featureCounts.out [2024-12-20 09:31:00,935] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G240_M01_featureCounts.out [2024-12-20 09:31:00,935] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G240_M01_featureCounts.out [2024-12-20 09:31:00,940] multiqc [DEBUG ] File ignored by vep/vep_html because it exceeded search pattern filesize limit: G240_M01_featureCounts.out [2024-12-20 09:31:00,940] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G240_M01_featureCounts.out [2024-12-20 09:31:00,941] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G240_M01_featureCounts.out [2024-12-20 09:31:00,941] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: G240_M01_featureCounts.out [2024-12-20 09:31:00,941] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: G240_M01_featureCounts.out [2024-12-20 09:31:00,941] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: G240_M01_featureCounts.out [2024-12-20 09:31:00,941] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: G240_M01_featureCounts.out [2024-12-20 09:31:00,941] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: G240_M01_featureCounts.out [2024-12-20 09:31:00,963] multiqc [DEBUG ] File ignored by stacks/sumstats because it exceeded search pattern filesize limit: G240_M01_featureCounts.out [2024-12-20 09:31:01,873] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G240_M01_featureCounts.out [2024-12-20 09:31:01,876] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G240_M01_featureCounts.out [2024-12-20 09:31:01,876] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G240_M01_featureCounts.out [2024-12-20 09:31:01,876] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G240_M01_featureCounts.out [2024-12-20 09:31:01,881] multiqc [DEBUG ] File ignored by vep/vep_html because it exceeded search pattern filesize limit: G240_M01_featureCounts.out [2024-12-20 09:31:01,881] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G240_M01_featureCounts.out [2024-12-20 09:31:01,881] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G240_M01_featureCounts.out [2024-12-20 09:31:01,881] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: G240_M01_featureCounts.out [2024-12-20 09:31:01,882] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: G240_M01_featureCounts.out [2024-12-20 09:31:01,882] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: G240_M01_featureCounts.out [2024-12-20 09:31:01,882] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: G240_M01_featureCounts.out [2024-12-20 09:31:01,882] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: G240_M01_featureCounts.out [2024-12-20 09:31:01,903] multiqc [DEBUG ] File ignored by stacks/sumstats because it exceeded search pattern filesize limit: G240_M01_featureCounts.out [2024-12-20 09:31:02,755] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G240_M01_metrics [2024-12-20 09:31:02,758] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G240_M01_metrics [2024-12-20 09:31:02,761] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G240_M01_metrics [2024-12-20 09:31:02,811] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G240_M33_CKDL240041412-1A_22TG7VLT3_L4_1.fq.gz [2024-12-20 09:31:02,814] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G240_M33_CKDL240041412-1A_22TG7VLT3_L4_2.fq.gz [2024-12-20 09:31:02,874] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G240_M33_primary_unique.bam.bai [2024-12-20 09:31:02,911] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G240_M33_SJ.out.tab [2024-12-20 09:31:02,914] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G240_M33_SJ.out.tab [2024-12-20 09:31:02,914] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G240_M33_SJ.out.tab [2024-12-20 09:31:02,914] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G240_M33_SJ.out.tab [2024-12-20 09:31:02,920] multiqc [DEBUG ] File ignored by vep/vep_html because it exceeded search pattern filesize limit: G240_M33_SJ.out.tab [2024-12-20 09:31:02,920] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G240_M33_SJ.out.tab [2024-12-20 09:31:02,920] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G240_M33_SJ.out.tab [2024-12-20 09:31:02,920] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: G240_M33_SJ.out.tab [2024-12-20 09:31:02,920] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: G240_M33_SJ.out.tab [2024-12-20 09:31:02,920] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: G240_M33_SJ.out.tab [2024-12-20 09:31:02,920] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: G240_M33_SJ.out.tab [2024-12-20 09:31:02,920] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: G240_M33_SJ.out.tab [2024-12-20 09:31:02,920] multiqc [DEBUG ] File ignored by snpeff because it exceeded search pattern filesize limit: G240_M33_SJ.out.tab [2024-12-20 09:31:02,920] multiqc [DEBUG ] File ignored by stacks/sumstats because it exceeded search pattern filesize limit: G240_M33_SJ.out.tab [2024-12-20 09:31:05,279] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G240_M33_primary_unique.bam [2024-12-20 09:31:05,294] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G240_M33_marked_dup_metrics.txt [2024-12-20 09:31:05,297] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G240_M33_marked_dup_metrics.txt [2024-12-20 09:31:05,297] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G240_M33_marked_dup_metrics.txt [2024-12-20 09:31:05,297] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G240_M33_marked_dup_metrics.txt [2024-12-20 09:31:05,302] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G240_M33_marked_dup_metrics.txt [2024-12-20 09:31:05,330] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G240_M33_metrics [2024-12-20 09:31:05,332] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G240_M33_metrics [2024-12-20 09:31:05,332] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G240_M33_metrics [2024-12-20 09:31:05,332] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G240_M33_metrics [2024-12-20 09:31:05,337] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G240_M33_metrics [2024-12-20 09:31:05,393] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G240_M33_hist.pdf [2024-12-20 09:31:05,415] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G240_M33_featureCounts.out [2024-12-20 09:31:05,418] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G240_M33_featureCounts.out [2024-12-20 09:31:05,419] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G240_M33_featureCounts.out [2024-12-20 09:31:05,419] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G240_M33_featureCounts.out [2024-12-20 09:31:05,423] multiqc [DEBUG ] File ignored by vep/vep_html because it exceeded search pattern filesize limit: G240_M33_featureCounts.out [2024-12-20 09:31:05,423] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G240_M33_featureCounts.out [2024-12-20 09:31:05,423] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G240_M33_featureCounts.out [2024-12-20 09:31:05,423] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: G240_M33_featureCounts.out [2024-12-20 09:31:05,423] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: G240_M33_featureCounts.out [2024-12-20 09:31:05,423] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: G240_M33_featureCounts.out [2024-12-20 09:31:05,423] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: G240_M33_featureCounts.out [2024-12-20 09:31:05,423] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: G240_M33_featureCounts.out [2024-12-20 09:31:05,442] multiqc [DEBUG ] File ignored by stacks/sumstats because it exceeded search pattern filesize limit: G240_M33_featureCounts.out [2024-12-20 09:31:06,342] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G240_M33_featureCounts.out [2024-12-20 09:31:06,345] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G240_M33_featureCounts.out [2024-12-20 09:31:06,345] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G240_M33_featureCounts.out [2024-12-20 09:31:06,345] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G240_M33_featureCounts.out [2024-12-20 09:31:06,350] multiqc [DEBUG ] File ignored by vep/vep_html because it exceeded search pattern filesize limit: G240_M33_featureCounts.out [2024-12-20 09:31:06,350] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G240_M33_featureCounts.out [2024-12-20 09:31:06,350] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G240_M33_featureCounts.out [2024-12-20 09:31:06,350] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: G240_M33_featureCounts.out [2024-12-20 09:31:06,350] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: G240_M33_featureCounts.out [2024-12-20 09:31:06,350] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: G240_M33_featureCounts.out [2024-12-20 09:31:06,350] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: G240_M33_featureCounts.out [2024-12-20 09:31:06,350] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: G240_M33_featureCounts.out [2024-12-20 09:31:06,370] multiqc [DEBUG ] File ignored by stacks/sumstats because it exceeded search pattern filesize limit: G240_M33_featureCounts.out [2024-12-20 09:31:07,247] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G240_M33_metrics [2024-12-20 09:31:07,249] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G240_M33_metrics [2024-12-20 09:31:07,252] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G240_M33_metrics [2024-12-20 09:31:07,293] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G240_M29_CKDL240041412-1A_22TG7VLT3_L4_1.fq.gz [2024-12-20 09:31:07,296] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G240_M29_CKDL240041412-1A_22TG7VLT3_L4_2.fq.gz [2024-12-20 09:31:07,353] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G240_M29_SJ.out.tab [2024-12-20 09:31:07,356] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G240_M29_SJ.out.tab [2024-12-20 09:31:07,356] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G240_M29_SJ.out.tab [2024-12-20 09:31:07,356] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G240_M29_SJ.out.tab [2024-12-20 09:31:07,360] multiqc [DEBUG ] File ignored by vep/vep_html because it exceeded search pattern filesize limit: G240_M29_SJ.out.tab [2024-12-20 09:31:07,360] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G240_M29_SJ.out.tab [2024-12-20 09:31:07,361] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G240_M29_SJ.out.tab [2024-12-20 09:31:07,361] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: G240_M29_SJ.out.tab [2024-12-20 09:31:07,361] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: G240_M29_SJ.out.tab [2024-12-20 09:31:07,361] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: G240_M29_SJ.out.tab [2024-12-20 09:31:07,361] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: G240_M29_SJ.out.tab [2024-12-20 09:31:07,361] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: G240_M29_SJ.out.tab [2024-12-20 09:31:07,361] multiqc [DEBUG ] File ignored by snpeff because it exceeded search pattern filesize limit: G240_M29_SJ.out.tab [2024-12-20 09:31:07,361] multiqc [DEBUG ] File ignored by stacks/sumstats because it exceeded search pattern filesize limit: G240_M29_SJ.out.tab [2024-12-20 09:31:09,545] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G240_M29_primary_unique.bam [2024-12-20 09:31:09,589] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G240_M29_primary_unique.bam.bai [2024-12-20 09:31:09,617] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G240_M29_marked_dup_metrics.txt [2024-12-20 09:31:09,619] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G240_M29_marked_dup_metrics.txt [2024-12-20 09:31:09,620] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G240_M29_marked_dup_metrics.txt [2024-12-20 09:31:09,620] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G240_M29_marked_dup_metrics.txt [2024-12-20 09:31:09,625] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G240_M29_marked_dup_metrics.txt [2024-12-20 09:31:09,640] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G240_M29_hist.pdf [2024-12-20 09:31:09,655] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G240_M29_metrics [2024-12-20 09:31:09,658] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G240_M29_metrics [2024-12-20 09:31:09,658] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G240_M29_metrics [2024-12-20 09:31:09,658] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G240_M29_metrics [2024-12-20 09:31:09,663] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G240_M29_metrics [2024-12-20 09:31:09,753] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G240_M29_featureCounts.out [2024-12-20 09:31:09,756] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G240_M29_featureCounts.out [2024-12-20 09:31:09,756] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G240_M29_featureCounts.out [2024-12-20 09:31:09,757] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G240_M29_featureCounts.out [2024-12-20 09:31:09,761] multiqc [DEBUG ] File ignored by vep/vep_html because it exceeded search pattern filesize limit: G240_M29_featureCounts.out [2024-12-20 09:31:09,761] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G240_M29_featureCounts.out [2024-12-20 09:31:09,761] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G240_M29_featureCounts.out [2024-12-20 09:31:09,761] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: G240_M29_featureCounts.out [2024-12-20 09:31:09,762] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: G240_M29_featureCounts.out [2024-12-20 09:31:09,762] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: G240_M29_featureCounts.out [2024-12-20 09:31:09,762] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: G240_M29_featureCounts.out [2024-12-20 09:31:09,762] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: G240_M29_featureCounts.out [2024-12-20 09:31:09,783] multiqc [DEBUG ] File ignored by stacks/sumstats because it exceeded search pattern filesize limit: G240_M29_featureCounts.out [2024-12-20 09:31:10,708] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G240_M29_featureCounts.out [2024-12-20 09:31:10,712] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G240_M29_featureCounts.out [2024-12-20 09:31:10,712] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G240_M29_featureCounts.out [2024-12-20 09:31:10,712] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G240_M29_featureCounts.out [2024-12-20 09:31:10,719] multiqc [DEBUG ] File ignored by vep/vep_html because it exceeded search pattern filesize limit: G240_M29_featureCounts.out [2024-12-20 09:31:10,719] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G240_M29_featureCounts.out [2024-12-20 09:31:10,719] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G240_M29_featureCounts.out [2024-12-20 09:31:10,719] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: G240_M29_featureCounts.out [2024-12-20 09:31:10,719] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: G240_M29_featureCounts.out [2024-12-20 09:31:10,719] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: G240_M29_featureCounts.out [2024-12-20 09:31:10,719] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: G240_M29_featureCounts.out [2024-12-20 09:31:10,719] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: G240_M29_featureCounts.out [2024-12-20 09:31:10,739] multiqc [DEBUG ] File ignored by stacks/sumstats because it exceeded search pattern filesize limit: G240_M29_featureCounts.out [2024-12-20 09:31:11,631] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G240_M29_metrics [2024-12-20 09:31:11,633] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G240_M29_metrics [2024-12-20 09:31:11,635] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G240_M29_metrics [2024-12-20 09:31:11,682] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G240_M30_CKDL240041412-1A_22TG7VLT3_L4_2.fq.gz [2024-12-20 09:31:11,685] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G240_M30_CKDL240041412-1A_22TG7VLT3_L4_1.fq.gz [2024-12-20 09:31:11,738] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G240_M30_SJ.out.tab [2024-12-20 09:31:11,741] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G240_M30_SJ.out.tab [2024-12-20 09:31:11,741] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G240_M30_SJ.out.tab [2024-12-20 09:31:11,741] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G240_M30_SJ.out.tab [2024-12-20 09:31:11,746] multiqc [DEBUG ] File ignored by vep/vep_html because it exceeded search pattern filesize limit: G240_M30_SJ.out.tab [2024-12-20 09:31:11,746] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G240_M30_SJ.out.tab [2024-12-20 09:31:11,746] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G240_M30_SJ.out.tab [2024-12-20 09:31:11,747] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: G240_M30_SJ.out.tab [2024-12-20 09:31:11,747] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: G240_M30_SJ.out.tab [2024-12-20 09:31:11,747] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: G240_M30_SJ.out.tab [2024-12-20 09:31:11,747] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: G240_M30_SJ.out.tab [2024-12-20 09:31:11,747] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: G240_M30_SJ.out.tab [2024-12-20 09:31:11,747] multiqc [DEBUG ] File ignored by snpeff because it exceeded search pattern filesize limit: G240_M30_SJ.out.tab [2024-12-20 09:31:11,747] multiqc [DEBUG ] File ignored by stacks/sumstats because it exceeded search pattern filesize limit: G240_M30_SJ.out.tab [2024-12-20 09:31:13,714] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G240_M30_primary_unique.bam.bai [2024-12-20 09:31:13,715] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G240_M30_primary_unique.bam [2024-12-20 09:31:13,794] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G240_M30_marked_dup_metrics.txt [2024-12-20 09:31:13,797] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G240_M30_marked_dup_metrics.txt [2024-12-20 09:31:13,797] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G240_M30_marked_dup_metrics.txt [2024-12-20 09:31:13,797] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G240_M30_marked_dup_metrics.txt [2024-12-20 09:31:13,802] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G240_M30_marked_dup_metrics.txt [2024-12-20 09:31:13,845] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G240_M30_metrics [2024-12-20 09:31:13,848] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G240_M30_metrics [2024-12-20 09:31:13,849] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G240_M30_metrics [2024-12-20 09:31:13,849] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G240_M30_metrics [2024-12-20 09:31:13,853] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G240_M30_metrics [2024-12-20 09:31:13,911] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G240_M30_hist.pdf [2024-12-20 09:31:13,935] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G240_M30_featureCounts.out [2024-12-20 09:31:13,938] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G240_M30_featureCounts.out [2024-12-20 09:31:13,938] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G240_M30_featureCounts.out [2024-12-20 09:31:13,938] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G240_M30_featureCounts.out [2024-12-20 09:31:13,944] multiqc [DEBUG ] File ignored by vep/vep_html because it exceeded search pattern filesize limit: G240_M30_featureCounts.out [2024-12-20 09:31:13,944] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G240_M30_featureCounts.out [2024-12-20 09:31:13,944] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G240_M30_featureCounts.out [2024-12-20 09:31:13,944] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: G240_M30_featureCounts.out [2024-12-20 09:31:13,944] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: G240_M30_featureCounts.out [2024-12-20 09:31:13,944] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: G240_M30_featureCounts.out [2024-12-20 09:31:13,945] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: G240_M30_featureCounts.out [2024-12-20 09:31:13,945] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: G240_M30_featureCounts.out [2024-12-20 09:31:13,970] multiqc [DEBUG ] File ignored by stacks/sumstats because it exceeded search pattern filesize limit: G240_M30_featureCounts.out [2024-12-20 09:31:14,854] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G240_M30_featureCounts.out [2024-12-20 09:31:14,857] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G240_M30_featureCounts.out [2024-12-20 09:31:14,868] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G240_M30_featureCounts.out [2024-12-20 09:31:14,868] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G240_M30_featureCounts.out [2024-12-20 09:31:14,873] multiqc [DEBUG ] File ignored by vep/vep_html because it exceeded search pattern filesize limit: G240_M30_featureCounts.out [2024-12-20 09:31:14,873] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G240_M30_featureCounts.out [2024-12-20 09:31:14,873] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G240_M30_featureCounts.out [2024-12-20 09:31:14,873] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: G240_M30_featureCounts.out [2024-12-20 09:31:14,873] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: G240_M30_featureCounts.out [2024-12-20 09:31:14,873] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: G240_M30_featureCounts.out [2024-12-20 09:31:14,873] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: G240_M30_featureCounts.out [2024-12-20 09:31:14,873] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: G240_M30_featureCounts.out [2024-12-20 09:31:14,897] multiqc [DEBUG ] File ignored by stacks/sumstats because it exceeded search pattern filesize limit: G240_M30_featureCounts.out [2024-12-20 09:31:15,789] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G240_M30_metrics [2024-12-20 09:31:15,791] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G240_M30_metrics [2024-12-20 09:31:15,793] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G240_M30_metrics [2024-12-20 09:31:15,825] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G240_M26_CKDL240041412-1A_22TG7VLT3_L4_1.fq.gz [2024-12-20 09:31:15,829] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G240_M26_CKDL240041412-1A_22TG7VLT3_L4_2.fq.gz [2024-12-20 09:31:15,884] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G240_M26_SJ.out.tab [2024-12-20 09:31:15,887] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G240_M26_SJ.out.tab [2024-12-20 09:31:15,887] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G240_M26_SJ.out.tab [2024-12-20 09:31:15,887] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G240_M26_SJ.out.tab [2024-12-20 09:31:15,892] multiqc [DEBUG ] File ignored by vep/vep_html because it exceeded search pattern filesize limit: G240_M26_SJ.out.tab [2024-12-20 09:31:15,892] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G240_M26_SJ.out.tab [2024-12-20 09:31:15,892] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G240_M26_SJ.out.tab [2024-12-20 09:31:15,892] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: G240_M26_SJ.out.tab [2024-12-20 09:31:15,892] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: G240_M26_SJ.out.tab [2024-12-20 09:31:15,892] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: G240_M26_SJ.out.tab [2024-12-20 09:31:15,892] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: G240_M26_SJ.out.tab [2024-12-20 09:31:15,892] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: G240_M26_SJ.out.tab [2024-12-20 09:31:15,892] multiqc [DEBUG ] File ignored by snpeff because it exceeded search pattern filesize limit: G240_M26_SJ.out.tab [2024-12-20 09:31:15,892] multiqc [DEBUG ] File ignored by stacks/sumstats because it exceeded search pattern filesize limit: G240_M26_SJ.out.tab [2024-12-20 09:31:18,009] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G240_M26_primary_unique.bam.bai [2024-12-20 09:31:18,010] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G240_M26_primary_unique.bam [2024-12-20 09:31:18,061] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G240_M26_marked_dup_metrics.txt [2024-12-20 09:31:18,064] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G240_M26_marked_dup_metrics.txt [2024-12-20 09:31:18,064] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G240_M26_marked_dup_metrics.txt [2024-12-20 09:31:18,064] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G240_M26_marked_dup_metrics.txt [2024-12-20 09:31:18,069] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G240_M26_marked_dup_metrics.txt [2024-12-20 09:31:18,105] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G240_M26_metrics [2024-12-20 09:31:18,108] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G240_M26_metrics [2024-12-20 09:31:18,108] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G240_M26_metrics [2024-12-20 09:31:18,108] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G240_M26_metrics [2024-12-20 09:31:18,113] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G240_M26_metrics [2024-12-20 09:31:18,214] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G240_M26_hist.pdf [2024-12-20 09:31:18,245] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G240_M26_featureCounts.out [2024-12-20 09:31:18,248] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G240_M26_featureCounts.out [2024-12-20 09:31:18,248] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G240_M26_featureCounts.out [2024-12-20 09:31:18,248] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G240_M26_featureCounts.out [2024-12-20 09:31:18,252] multiqc [DEBUG ] File ignored by vep/vep_html because it exceeded search pattern filesize limit: G240_M26_featureCounts.out [2024-12-20 09:31:18,252] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G240_M26_featureCounts.out [2024-12-20 09:31:18,252] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G240_M26_featureCounts.out [2024-12-20 09:31:18,253] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: G240_M26_featureCounts.out [2024-12-20 09:31:18,253] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: G240_M26_featureCounts.out [2024-12-20 09:31:18,253] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: G240_M26_featureCounts.out [2024-12-20 09:31:18,253] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: G240_M26_featureCounts.out [2024-12-20 09:31:18,253] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: G240_M26_featureCounts.out [2024-12-20 09:31:18,273] multiqc [DEBUG ] File ignored by stacks/sumstats because it exceeded search pattern filesize limit: G240_M26_featureCounts.out [2024-12-20 09:31:19,183] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G240_M26_featureCounts.out [2024-12-20 09:31:19,185] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G240_M26_featureCounts.out [2024-12-20 09:31:19,186] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G240_M26_featureCounts.out [2024-12-20 09:31:19,186] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G240_M26_featureCounts.out [2024-12-20 09:31:19,190] multiqc [DEBUG ] File ignored by vep/vep_html because it exceeded search pattern filesize limit: G240_M26_featureCounts.out [2024-12-20 09:31:19,190] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G240_M26_featureCounts.out [2024-12-20 09:31:19,190] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G240_M26_featureCounts.out [2024-12-20 09:31:19,190] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: G240_M26_featureCounts.out [2024-12-20 09:31:19,190] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: G240_M26_featureCounts.out [2024-12-20 09:31:19,190] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: G240_M26_featureCounts.out [2024-12-20 09:31:19,190] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: G240_M26_featureCounts.out [2024-12-20 09:31:19,191] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: G240_M26_featureCounts.out [2024-12-20 09:31:19,212] multiqc [DEBUG ] File ignored by stacks/sumstats because it exceeded search pattern filesize limit: G240_M26_featureCounts.out [2024-12-20 09:31:20,077] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G240_M26_metrics [2024-12-20 09:31:20,079] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G240_M26_metrics [2024-12-20 09:31:20,082] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G240_M26_metrics [2024-12-20 09:31:20,123] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G240_M17_CKDL240041412-1A_22TG7VLT3_L4_1.fq.gz [2024-12-20 09:31:20,126] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G240_M17_CKDL240041412-1A_22TG7VLT3_L4_2.fq.gz [2024-12-20 09:31:20,161] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G240_M17_primary_unique.bam.bai [2024-12-20 09:31:20,175] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G240_M17_primary_unique.bam [2024-12-20 09:31:20,202] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G240_M17_SJ.out.tab [2024-12-20 09:31:20,205] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G240_M17_SJ.out.tab [2024-12-20 09:31:20,205] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G240_M17_SJ.out.tab [2024-12-20 09:31:20,205] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G240_M17_SJ.out.tab [2024-12-20 09:31:20,209] multiqc [DEBUG ] File ignored by vep/vep_html because it exceeded search pattern filesize limit: G240_M17_SJ.out.tab [2024-12-20 09:31:20,209] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G240_M17_SJ.out.tab [2024-12-20 09:31:20,210] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G240_M17_SJ.out.tab [2024-12-20 09:31:20,210] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: G240_M17_SJ.out.tab [2024-12-20 09:31:20,210] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: G240_M17_SJ.out.tab [2024-12-20 09:31:20,210] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: G240_M17_SJ.out.tab [2024-12-20 09:31:20,210] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: G240_M17_SJ.out.tab [2024-12-20 09:31:20,210] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: G240_M17_SJ.out.tab [2024-12-20 09:31:20,210] multiqc [DEBUG ] File ignored by snpeff because it exceeded search pattern filesize limit: G240_M17_SJ.out.tab [2024-12-20 09:31:20,210] multiqc [DEBUG ] File ignored by stacks/sumstats because it exceeded search pattern filesize limit: G240_M17_SJ.out.tab [2024-12-20 09:31:22,214] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G240_M17_marked_dup_metrics.txt [2024-12-20 09:31:22,217] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G240_M17_marked_dup_metrics.txt [2024-12-20 09:31:22,217] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G240_M17_marked_dup_metrics.txt [2024-12-20 09:31:22,217] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G240_M17_marked_dup_metrics.txt [2024-12-20 09:31:22,222] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G240_M17_marked_dup_metrics.txt [2024-12-20 09:31:22,244] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G240_M17_hist.pdf [2024-12-20 09:31:22,265] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G240_M17_metrics [2024-12-20 09:31:22,267] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G240_M17_metrics [2024-12-20 09:31:22,268] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G240_M17_metrics [2024-12-20 09:31:22,268] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G240_M17_metrics [2024-12-20 09:31:22,273] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G240_M17_metrics [2024-12-20 09:31:22,368] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G240_M17_featureCounts.out [2024-12-20 09:31:22,371] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G240_M17_featureCounts.out [2024-12-20 09:31:22,371] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G240_M17_featureCounts.out [2024-12-20 09:31:22,371] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G240_M17_featureCounts.out [2024-12-20 09:31:22,376] multiqc [DEBUG ] File ignored by vep/vep_html because it exceeded search pattern filesize limit: G240_M17_featureCounts.out [2024-12-20 09:31:22,376] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G240_M17_featureCounts.out [2024-12-20 09:31:22,376] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G240_M17_featureCounts.out [2024-12-20 09:31:22,376] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: G240_M17_featureCounts.out [2024-12-20 09:31:22,377] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: G240_M17_featureCounts.out [2024-12-20 09:31:22,377] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: G240_M17_featureCounts.out [2024-12-20 09:31:22,377] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: G240_M17_featureCounts.out [2024-12-20 09:31:22,377] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: G240_M17_featureCounts.out [2024-12-20 09:31:22,398] multiqc [DEBUG ] File ignored by stacks/sumstats because it exceeded search pattern filesize limit: G240_M17_featureCounts.out [2024-12-20 09:31:23,311] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G240_M17_featureCounts.out [2024-12-20 09:31:23,314] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G240_M17_featureCounts.out [2024-12-20 09:31:23,314] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G240_M17_featureCounts.out [2024-12-20 09:31:23,314] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G240_M17_featureCounts.out [2024-12-20 09:31:23,319] multiqc [DEBUG ] File ignored by vep/vep_html because it exceeded search pattern filesize limit: G240_M17_featureCounts.out [2024-12-20 09:31:23,319] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G240_M17_featureCounts.out [2024-12-20 09:31:23,319] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G240_M17_featureCounts.out [2024-12-20 09:31:23,319] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: G240_M17_featureCounts.out [2024-12-20 09:31:23,319] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: G240_M17_featureCounts.out [2024-12-20 09:31:23,319] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: G240_M17_featureCounts.out [2024-12-20 09:31:23,319] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: G240_M17_featureCounts.out [2024-12-20 09:31:23,319] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: G240_M17_featureCounts.out [2024-12-20 09:31:23,339] multiqc [DEBUG ] File ignored by stacks/sumstats because it exceeded search pattern filesize limit: G240_M17_featureCounts.out [2024-12-20 09:31:24,221] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G240_M17_metrics [2024-12-20 09:31:24,223] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G240_M17_metrics [2024-12-20 09:31:24,225] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G240_M17_metrics [2024-12-20 09:31:24,263] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G240_M14_CKDL240041412-1A_22TG7VLT3_L4_2.fq.gz [2024-12-20 09:31:24,266] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G240_M14_CKDL240041412-1A_22TG7VLT3_L4_1.fq.gz [2024-12-20 09:31:24,337] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G240_M14_primary_unique.bam [2024-12-20 09:31:24,379] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G240_M14_SJ.out.tab [2024-12-20 09:31:24,382] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G240_M14_SJ.out.tab [2024-12-20 09:31:24,382] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G240_M14_SJ.out.tab [2024-12-20 09:31:24,383] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G240_M14_SJ.out.tab [2024-12-20 09:31:24,387] multiqc [DEBUG ] File ignored by vep/vep_html because it exceeded search pattern filesize limit: G240_M14_SJ.out.tab [2024-12-20 09:31:24,387] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G240_M14_SJ.out.tab [2024-12-20 09:31:24,387] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G240_M14_SJ.out.tab [2024-12-20 09:31:24,387] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: G240_M14_SJ.out.tab [2024-12-20 09:31:24,387] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: G240_M14_SJ.out.tab [2024-12-20 09:31:24,387] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: G240_M14_SJ.out.tab [2024-12-20 09:31:24,387] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: G240_M14_SJ.out.tab [2024-12-20 09:31:24,387] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: G240_M14_SJ.out.tab [2024-12-20 09:31:24,387] multiqc [DEBUG ] File ignored by snpeff because it exceeded search pattern filesize limit: G240_M14_SJ.out.tab [2024-12-20 09:31:24,387] multiqc [DEBUG ] File ignored by stacks/sumstats because it exceeded search pattern filesize limit: G240_M14_SJ.out.tab [2024-12-20 09:31:26,486] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G240_M14_primary_unique.bam.bai [2024-12-20 09:31:26,506] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G240_M14_marked_dup_metrics.txt [2024-12-20 09:31:26,509] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G240_M14_marked_dup_metrics.txt [2024-12-20 09:31:26,509] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G240_M14_marked_dup_metrics.txt [2024-12-20 09:31:26,509] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G240_M14_marked_dup_metrics.txt [2024-12-20 09:31:26,515] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G240_M14_marked_dup_metrics.txt [2024-12-20 09:31:26,530] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G240_M14_hist.pdf [2024-12-20 09:31:26,555] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G240_M14_metrics [2024-12-20 09:31:26,557] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G240_M14_metrics [2024-12-20 09:31:26,558] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G240_M14_metrics [2024-12-20 09:31:26,558] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G240_M14_metrics [2024-12-20 09:31:26,563] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G240_M14_metrics [2024-12-20 09:31:26,661] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G240_M14_featureCounts.out [2024-12-20 09:31:26,664] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G240_M14_featureCounts.out [2024-12-20 09:31:26,665] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G240_M14_featureCounts.out [2024-12-20 09:31:26,665] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G240_M14_featureCounts.out [2024-12-20 09:31:26,669] multiqc [DEBUG ] File ignored by vep/vep_html because it exceeded search pattern filesize limit: G240_M14_featureCounts.out [2024-12-20 09:31:26,669] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G240_M14_featureCounts.out [2024-12-20 09:31:26,669] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G240_M14_featureCounts.out [2024-12-20 09:31:26,669] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: G240_M14_featureCounts.out [2024-12-20 09:31:26,669] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: G240_M14_featureCounts.out [2024-12-20 09:31:26,669] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: G240_M14_featureCounts.out [2024-12-20 09:31:26,669] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: G240_M14_featureCounts.out [2024-12-20 09:31:26,669] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: G240_M14_featureCounts.out [2024-12-20 09:31:26,690] multiqc [DEBUG ] File ignored by stacks/sumstats because it exceeded search pattern filesize limit: G240_M14_featureCounts.out [2024-12-20 09:31:27,571] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G240_M14_featureCounts.out [2024-12-20 09:31:27,574] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G240_M14_featureCounts.out [2024-12-20 09:31:27,574] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G240_M14_featureCounts.out [2024-12-20 09:31:27,574] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G240_M14_featureCounts.out [2024-12-20 09:31:27,579] multiqc [DEBUG ] File ignored by vep/vep_html because it exceeded search pattern filesize limit: G240_M14_featureCounts.out [2024-12-20 09:31:27,579] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G240_M14_featureCounts.out [2024-12-20 09:31:27,579] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G240_M14_featureCounts.out [2024-12-20 09:31:27,579] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: G240_M14_featureCounts.out [2024-12-20 09:31:27,579] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: G240_M14_featureCounts.out [2024-12-20 09:31:27,579] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: G240_M14_featureCounts.out [2024-12-20 09:31:27,579] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: G240_M14_featureCounts.out [2024-12-20 09:31:27,579] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: G240_M14_featureCounts.out [2024-12-20 09:31:27,600] multiqc [DEBUG ] File ignored by stacks/sumstats because it exceeded search pattern filesize limit: G240_M14_featureCounts.out [2024-12-20 09:31:28,498] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G240_M14_metrics [2024-12-20 09:31:28,500] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G240_M14_metrics [2024-12-20 09:31:28,504] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G240_M14_metrics [2024-12-20 09:31:28,545] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G240_M11_CKDL240041412-1A_22TG7VLT3_L4_2.fq.gz [2024-12-20 09:31:28,548] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G240_M11_CKDL240041412-1A_22TG7VLT3_L4_1.fq.gz [2024-12-20 09:31:28,614] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G240_M11_SJ.out.tab [2024-12-20 09:31:28,617] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G240_M11_SJ.out.tab [2024-12-20 09:31:28,617] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G240_M11_SJ.out.tab [2024-12-20 09:31:28,617] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G240_M11_SJ.out.tab [2024-12-20 09:31:28,622] multiqc [DEBUG ] File ignored by vep/vep_html because it exceeded search pattern filesize limit: G240_M11_SJ.out.tab [2024-12-20 09:31:28,622] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G240_M11_SJ.out.tab [2024-12-20 09:31:28,622] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G240_M11_SJ.out.tab [2024-12-20 09:31:28,622] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: G240_M11_SJ.out.tab [2024-12-20 09:31:28,622] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: G240_M11_SJ.out.tab [2024-12-20 09:31:28,622] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: G240_M11_SJ.out.tab [2024-12-20 09:31:28,622] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: G240_M11_SJ.out.tab [2024-12-20 09:31:28,622] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: G240_M11_SJ.out.tab [2024-12-20 09:31:28,622] multiqc [DEBUG ] File ignored by snpeff because it exceeded search pattern filesize limit: G240_M11_SJ.out.tab [2024-12-20 09:31:28,622] multiqc [DEBUG ] File ignored by stacks/sumstats because it exceeded search pattern filesize limit: G240_M11_SJ.out.tab [2024-12-20 09:31:30,900] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G240_M11_primary_unique.bam [2024-12-20 09:31:30,900] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G240_M11_primary_unique.bam.bai [2024-12-20 09:31:30,953] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G240_M11_marked_dup_metrics.txt [2024-12-20 09:31:30,956] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G240_M11_marked_dup_metrics.txt [2024-12-20 09:31:30,956] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G240_M11_marked_dup_metrics.txt [2024-12-20 09:31:30,956] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G240_M11_marked_dup_metrics.txt [2024-12-20 09:31:30,960] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G240_M11_marked_dup_metrics.txt [2024-12-20 09:31:30,989] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G240_M11_metrics [2024-12-20 09:31:30,992] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G240_M11_metrics [2024-12-20 09:31:30,992] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G240_M11_metrics [2024-12-20 09:31:30,992] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G240_M11_metrics [2024-12-20 09:31:30,998] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G240_M11_metrics [2024-12-20 09:31:31,059] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G240_M11_hist.pdf [2024-12-20 09:31:31,103] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G240_M11_featureCounts.out [2024-12-20 09:31:31,105] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G240_M11_featureCounts.out [2024-12-20 09:31:31,106] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G240_M11_featureCounts.out [2024-12-20 09:31:31,106] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G240_M11_featureCounts.out [2024-12-20 09:31:31,111] multiqc [DEBUG ] File ignored by vep/vep_html because it exceeded search pattern filesize limit: G240_M11_featureCounts.out [2024-12-20 09:31:31,111] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G240_M11_featureCounts.out [2024-12-20 09:31:31,111] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G240_M11_featureCounts.out [2024-12-20 09:31:31,111] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: G240_M11_featureCounts.out [2024-12-20 09:31:31,111] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: G240_M11_featureCounts.out [2024-12-20 09:31:31,111] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: G240_M11_featureCounts.out [2024-12-20 09:31:31,111] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: G240_M11_featureCounts.out [2024-12-20 09:31:31,112] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: G240_M11_featureCounts.out [2024-12-20 09:31:31,133] multiqc [DEBUG ] File ignored by stacks/sumstats because it exceeded search pattern filesize limit: G240_M11_featureCounts.out [2024-12-20 09:31:32,045] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G240_M11_featureCounts.out [2024-12-20 09:31:32,048] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G240_M11_featureCounts.out [2024-12-20 09:31:32,048] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G240_M11_featureCounts.out [2024-12-20 09:31:32,048] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G240_M11_featureCounts.out [2024-12-20 09:31:32,053] multiqc [DEBUG ] File ignored by vep/vep_html because it exceeded search pattern filesize limit: G240_M11_featureCounts.out [2024-12-20 09:31:32,053] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G240_M11_featureCounts.out [2024-12-20 09:31:32,053] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G240_M11_featureCounts.out [2024-12-20 09:31:32,053] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: G240_M11_featureCounts.out [2024-12-20 09:31:32,053] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: G240_M11_featureCounts.out [2024-12-20 09:31:32,053] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: G240_M11_featureCounts.out [2024-12-20 09:31:32,053] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: G240_M11_featureCounts.out [2024-12-20 09:31:32,053] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: G240_M11_featureCounts.out [2024-12-20 09:31:32,073] multiqc [DEBUG ] File ignored by stacks/sumstats because it exceeded search pattern filesize limit: G240_M11_featureCounts.out [2024-12-20 09:31:32,939] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G240_M11_metrics [2024-12-20 09:31:32,940] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G240_M11_metrics [2024-12-20 09:31:32,944] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G240_M11_metrics [2024-12-20 09:31:32,979] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G240_M02_CKDL240041412-1A_22TG7VLT3_L4_2.fq.gz [2024-12-20 09:31:32,982] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G240_M02_CKDL240041412-1A_22TG7VLT3_L4_1.fq.gz [2024-12-20 09:31:33,019] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G240_M02_primary_unique.bam [2024-12-20 09:31:33,034] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G240_M02_primary_unique.bam.bai [2024-12-20 09:31:33,066] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G240_M02_SJ.out.tab [2024-12-20 09:31:33,068] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G240_M02_SJ.out.tab [2024-12-20 09:31:33,069] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G240_M02_SJ.out.tab [2024-12-20 09:31:33,069] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G240_M02_SJ.out.tab [2024-12-20 09:31:33,073] multiqc [DEBUG ] File ignored by vep/vep_html because it exceeded search pattern filesize limit: G240_M02_SJ.out.tab [2024-12-20 09:31:33,073] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G240_M02_SJ.out.tab [2024-12-20 09:31:33,073] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G240_M02_SJ.out.tab [2024-12-20 09:31:33,073] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: G240_M02_SJ.out.tab [2024-12-20 09:31:33,073] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: G240_M02_SJ.out.tab [2024-12-20 09:31:33,073] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: G240_M02_SJ.out.tab [2024-12-20 09:31:33,074] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: G240_M02_SJ.out.tab [2024-12-20 09:31:33,074] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: G240_M02_SJ.out.tab [2024-12-20 09:31:33,074] multiqc [DEBUG ] File ignored by snpeff because it exceeded search pattern filesize limit: G240_M02_SJ.out.tab [2024-12-20 09:31:33,074] multiqc [DEBUG ] File ignored by stacks/sumstats because it exceeded search pattern filesize limit: G240_M02_SJ.out.tab [2024-12-20 09:31:35,327] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G240_M02_marked_dup_metrics.txt [2024-12-20 09:31:35,330] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G240_M02_marked_dup_metrics.txt [2024-12-20 09:31:35,330] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G240_M02_marked_dup_metrics.txt [2024-12-20 09:31:35,330] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G240_M02_marked_dup_metrics.txt [2024-12-20 09:31:35,336] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G240_M02_marked_dup_metrics.txt [2024-12-20 09:31:35,380] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G240_M02_metrics [2024-12-20 09:31:35,383] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G240_M02_metrics [2024-12-20 09:31:35,384] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G240_M02_metrics [2024-12-20 09:31:35,384] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G240_M02_metrics [2024-12-20 09:31:35,389] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G240_M02_metrics [2024-12-20 09:31:35,467] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G240_M02_hist.pdf [2024-12-20 09:31:35,493] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G240_M02_featureCounts.out [2024-12-20 09:31:35,496] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G240_M02_featureCounts.out [2024-12-20 09:31:35,496] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G240_M02_featureCounts.out [2024-12-20 09:31:35,496] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G240_M02_featureCounts.out [2024-12-20 09:31:35,501] multiqc [DEBUG ] File ignored by vep/vep_html because it exceeded search pattern filesize limit: G240_M02_featureCounts.out [2024-12-20 09:31:35,501] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G240_M02_featureCounts.out [2024-12-20 09:31:35,501] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G240_M02_featureCounts.out [2024-12-20 09:31:35,501] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: G240_M02_featureCounts.out [2024-12-20 09:31:35,501] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: G240_M02_featureCounts.out [2024-12-20 09:31:35,501] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: G240_M02_featureCounts.out [2024-12-20 09:31:35,501] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: G240_M02_featureCounts.out [2024-12-20 09:31:35,501] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: G240_M02_featureCounts.out [2024-12-20 09:31:35,521] multiqc [DEBUG ] File ignored by stacks/sumstats because it exceeded search pattern filesize limit: G240_M02_featureCounts.out [2024-12-20 09:31:36,441] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G240_M02_featureCounts.out [2024-12-20 09:31:36,443] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G240_M02_featureCounts.out [2024-12-20 09:31:36,444] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G240_M02_featureCounts.out [2024-12-20 09:31:36,444] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G240_M02_featureCounts.out [2024-12-20 09:31:36,449] multiqc [DEBUG ] File ignored by vep/vep_html because it exceeded search pattern filesize limit: G240_M02_featureCounts.out [2024-12-20 09:31:36,449] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G240_M02_featureCounts.out [2024-12-20 09:31:36,449] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G240_M02_featureCounts.out [2024-12-20 09:31:36,449] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: G240_M02_featureCounts.out [2024-12-20 09:31:36,449] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: G240_M02_featureCounts.out [2024-12-20 09:31:36,449] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: G240_M02_featureCounts.out [2024-12-20 09:31:36,449] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: G240_M02_featureCounts.out [2024-12-20 09:31:36,449] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: G240_M02_featureCounts.out [2024-12-20 09:31:36,470] multiqc [DEBUG ] File ignored by stacks/sumstats because it exceeded search pattern filesize limit: G240_M02_featureCounts.out [2024-12-20 09:31:37,360] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G240_M02_metrics [2024-12-20 09:31:37,361] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G240_M02_metrics [2024-12-20 09:31:37,365] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G240_M02_metrics [2024-12-20 09:31:37,404] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G240_M34_CKDL240041412-1A_22TG7VLT3_L4_2.fq.gz [2024-12-20 09:31:37,407] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G240_M34_CKDL240041412-1A_22TG7VLT3_L4_1.fq.gz [2024-12-20 09:31:37,434] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G240_M34_SJ.out.tab [2024-12-20 09:31:37,437] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G240_M34_SJ.out.tab [2024-12-20 09:31:37,438] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G240_M34_SJ.out.tab [2024-12-20 09:31:37,438] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G240_M34_SJ.out.tab [2024-12-20 09:31:37,442] multiqc [DEBUG ] File ignored by vep/vep_html because it exceeded search pattern filesize limit: G240_M34_SJ.out.tab [2024-12-20 09:31:37,442] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G240_M34_SJ.out.tab [2024-12-20 09:31:37,442] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G240_M34_SJ.out.tab [2024-12-20 09:31:37,442] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: G240_M34_SJ.out.tab [2024-12-20 09:31:37,442] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: G240_M34_SJ.out.tab [2024-12-20 09:31:37,442] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: G240_M34_SJ.out.tab [2024-12-20 09:31:37,443] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: G240_M34_SJ.out.tab [2024-12-20 09:31:37,443] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: G240_M34_SJ.out.tab [2024-12-20 09:31:37,443] multiqc [DEBUG ] File ignored by snpeff because it exceeded search pattern filesize limit: G240_M34_SJ.out.tab [2024-12-20 09:31:37,443] multiqc [DEBUG ] File ignored by stacks/sumstats because it exceeded search pattern filesize limit: G240_M34_SJ.out.tab [2024-12-20 09:31:39,678] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G240_M34_primary_unique.bam [2024-12-20 09:31:39,697] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G240_M34_primary_unique.bam.bai [2024-12-20 09:31:39,733] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G240_M34_marked_dup_metrics.txt [2024-12-20 09:31:39,736] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G240_M34_marked_dup_metrics.txt [2024-12-20 09:31:39,736] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G240_M34_marked_dup_metrics.txt [2024-12-20 09:31:39,737] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G240_M34_marked_dup_metrics.txt [2024-12-20 09:31:39,741] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G240_M34_marked_dup_metrics.txt [2024-12-20 09:31:39,775] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G240_M34_metrics [2024-12-20 09:31:39,777] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G240_M34_metrics [2024-12-20 09:31:39,777] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G240_M34_metrics [2024-12-20 09:31:39,777] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G240_M34_metrics [2024-12-20 09:31:39,780] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G240_M34_metrics [2024-12-20 09:31:39,845] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G240_M34_hist.pdf [2024-12-20 09:31:39,892] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G240_M34_featureCounts.out [2024-12-20 09:31:39,895] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G240_M34_featureCounts.out [2024-12-20 09:31:39,895] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G240_M34_featureCounts.out [2024-12-20 09:31:39,895] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G240_M34_featureCounts.out [2024-12-20 09:31:39,901] multiqc [DEBUG ] File ignored by vep/vep_html because it exceeded search pattern filesize limit: G240_M34_featureCounts.out [2024-12-20 09:31:39,901] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G240_M34_featureCounts.out [2024-12-20 09:31:39,901] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G240_M34_featureCounts.out [2024-12-20 09:31:39,901] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: G240_M34_featureCounts.out [2024-12-20 09:31:39,901] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: G240_M34_featureCounts.out [2024-12-20 09:31:39,901] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: G240_M34_featureCounts.out [2024-12-20 09:31:39,901] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: G240_M34_featureCounts.out [2024-12-20 09:31:39,901] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: G240_M34_featureCounts.out [2024-12-20 09:31:39,922] multiqc [DEBUG ] File ignored by stacks/sumstats because it exceeded search pattern filesize limit: G240_M34_featureCounts.out [2024-12-20 09:31:40,864] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G240_M34_featureCounts.out [2024-12-20 09:31:40,866] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G240_M34_featureCounts.out [2024-12-20 09:31:40,867] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G240_M34_featureCounts.out [2024-12-20 09:31:40,867] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G240_M34_featureCounts.out [2024-12-20 09:31:40,871] multiqc [DEBUG ] File ignored by vep/vep_html because it exceeded search pattern filesize limit: G240_M34_featureCounts.out [2024-12-20 09:31:40,872] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G240_M34_featureCounts.out [2024-12-20 09:31:40,872] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G240_M34_featureCounts.out [2024-12-20 09:31:40,872] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: G240_M34_featureCounts.out [2024-12-20 09:31:40,872] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: G240_M34_featureCounts.out [2024-12-20 09:31:40,872] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: G240_M34_featureCounts.out [2024-12-20 09:31:40,872] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: G240_M34_featureCounts.out [2024-12-20 09:31:40,872] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: G240_M34_featureCounts.out [2024-12-20 09:31:40,892] multiqc [DEBUG ] File ignored by stacks/sumstats because it exceeded search pattern filesize limit: G240_M34_featureCounts.out [2024-12-20 09:31:41,774] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G240_M34_metrics [2024-12-20 09:31:41,776] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G240_M34_metrics [2024-12-20 09:31:41,788] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G240_M34_metrics [2024-12-20 09:31:41,827] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G240_M31_CKDL240041412-1A_22TG7VLT3_L4_1.fq.gz [2024-12-20 09:31:41,830] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G240_M31_CKDL240041412-1A_22TG7VLT3_L4_2.fq.gz [2024-12-20 09:31:41,849] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G240_M31_primary_unique.bam.bai [2024-12-20 09:31:41,922] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G240_M31_SJ.out.tab [2024-12-20 09:31:41,925] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G240_M31_SJ.out.tab [2024-12-20 09:31:41,925] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G240_M31_SJ.out.tab [2024-12-20 09:31:41,925] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G240_M31_SJ.out.tab [2024-12-20 09:31:41,930] multiqc [DEBUG ] File ignored by vep/vep_html because it exceeded search pattern filesize limit: G240_M31_SJ.out.tab [2024-12-20 09:31:41,930] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G240_M31_SJ.out.tab [2024-12-20 09:31:41,930] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G240_M31_SJ.out.tab [2024-12-20 09:31:41,930] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: G240_M31_SJ.out.tab [2024-12-20 09:31:41,930] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: G240_M31_SJ.out.tab [2024-12-20 09:31:41,930] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: G240_M31_SJ.out.tab [2024-12-20 09:31:41,930] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: G240_M31_SJ.out.tab [2024-12-20 09:31:41,930] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: G240_M31_SJ.out.tab [2024-12-20 09:31:41,930] multiqc [DEBUG ] File ignored by snpeff because it exceeded search pattern filesize limit: G240_M31_SJ.out.tab [2024-12-20 09:31:41,930] multiqc [DEBUG ] File ignored by stacks/sumstats because it exceeded search pattern filesize limit: G240_M31_SJ.out.tab [2024-12-20 09:31:44,068] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G240_M31_primary_unique.bam [2024-12-20 09:31:44,103] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G240_M31_marked_dup_metrics.txt [2024-12-20 09:31:44,104] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G240_M31_marked_dup_metrics.txt [2024-12-20 09:31:44,105] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G240_M31_marked_dup_metrics.txt [2024-12-20 09:31:44,105] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G240_M31_marked_dup_metrics.txt [2024-12-20 09:31:44,109] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G240_M31_marked_dup_metrics.txt [2024-12-20 09:31:44,133] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G240_M31_hist.pdf [2024-12-20 09:31:44,150] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G240_M31_metrics [2024-12-20 09:31:44,152] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G240_M31_metrics [2024-12-20 09:31:44,152] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G240_M31_metrics [2024-12-20 09:31:44,152] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G240_M31_metrics [2024-12-20 09:31:44,159] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G240_M31_metrics [2024-12-20 09:31:44,309] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G240_M31_featureCounts.out [2024-12-20 09:31:44,311] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G240_M31_featureCounts.out [2024-12-20 09:31:44,311] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G240_M31_featureCounts.out [2024-12-20 09:31:44,311] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G240_M31_featureCounts.out [2024-12-20 09:31:44,314] multiqc [DEBUG ] File ignored by vep/vep_html because it exceeded search pattern filesize limit: G240_M31_featureCounts.out [2024-12-20 09:31:44,315] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G240_M31_featureCounts.out [2024-12-20 09:31:44,315] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G240_M31_featureCounts.out [2024-12-20 09:31:44,315] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: G240_M31_featureCounts.out [2024-12-20 09:31:44,315] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: G240_M31_featureCounts.out [2024-12-20 09:31:44,315] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: G240_M31_featureCounts.out [2024-12-20 09:31:44,315] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: G240_M31_featureCounts.out [2024-12-20 09:31:44,315] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: G240_M31_featureCounts.out [2024-12-20 09:31:44,334] multiqc [DEBUG ] File ignored by stacks/sumstats because it exceeded search pattern filesize limit: G240_M31_featureCounts.out [2024-12-20 09:31:45,329] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G240_M31_featureCounts.out [2024-12-20 09:31:45,330] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G240_M31_featureCounts.out [2024-12-20 09:31:45,331] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G240_M31_featureCounts.out [2024-12-20 09:31:45,331] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G240_M31_featureCounts.out [2024-12-20 09:31:45,334] multiqc [DEBUG ] File ignored by vep/vep_html because it exceeded search pattern filesize limit: G240_M31_featureCounts.out [2024-12-20 09:31:45,334] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G240_M31_featureCounts.out [2024-12-20 09:31:45,335] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G240_M31_featureCounts.out [2024-12-20 09:31:45,335] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: G240_M31_featureCounts.out [2024-12-20 09:31:45,335] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: G240_M31_featureCounts.out [2024-12-20 09:31:45,335] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: G240_M31_featureCounts.out [2024-12-20 09:31:45,335] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: G240_M31_featureCounts.out [2024-12-20 09:31:45,335] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: G240_M31_featureCounts.out [2024-12-20 09:31:45,354] multiqc [DEBUG ] File ignored by stacks/sumstats because it exceeded search pattern filesize limit: G240_M31_featureCounts.out [2024-12-20 09:31:46,282] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G240_M31_metrics [2024-12-20 09:31:46,284] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G240_M31_metrics [2024-12-20 09:31:46,287] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G240_M31_metrics [2024-12-20 09:31:46,322] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G240_M18_CKDL240041412-1A_22TG7VLT3_L4_1.fq.gz [2024-12-20 09:31:46,325] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G240_M18_CKDL240041412-1A_22TG7VLT3_L4_2.fq.gz [2024-12-20 09:31:46,342] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G240_M18_primary_unique.bam.bai [2024-12-20 09:31:46,391] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G240_M18_SJ.out.tab [2024-12-20 09:31:46,393] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G240_M18_SJ.out.tab [2024-12-20 09:31:46,393] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G240_M18_SJ.out.tab [2024-12-20 09:31:46,393] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G240_M18_SJ.out.tab [2024-12-20 09:31:46,396] multiqc [DEBUG ] File ignored by vep/vep_html because it exceeded search pattern filesize limit: G240_M18_SJ.out.tab [2024-12-20 09:31:46,396] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G240_M18_SJ.out.tab [2024-12-20 09:31:46,396] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G240_M18_SJ.out.tab [2024-12-20 09:31:46,396] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: G240_M18_SJ.out.tab [2024-12-20 09:31:46,396] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: G240_M18_SJ.out.tab [2024-12-20 09:31:46,396] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: G240_M18_SJ.out.tab [2024-12-20 09:31:46,397] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: G240_M18_SJ.out.tab [2024-12-20 09:31:46,397] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: G240_M18_SJ.out.tab [2024-12-20 09:31:46,397] multiqc [DEBUG ] File ignored by snpeff because it exceeded search pattern filesize limit: G240_M18_SJ.out.tab [2024-12-20 09:31:46,397] multiqc [DEBUG ] File ignored by stacks/sumstats because it exceeded search pattern filesize limit: G240_M18_SJ.out.tab [2024-12-20 09:31:48,745] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G240_M18_primary_unique.bam [2024-12-20 09:31:48,769] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G240_M18_marked_dup_metrics.txt [2024-12-20 09:31:48,771] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G240_M18_marked_dup_metrics.txt [2024-12-20 09:31:48,772] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G240_M18_marked_dup_metrics.txt [2024-12-20 09:31:48,772] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G240_M18_marked_dup_metrics.txt [2024-12-20 09:31:48,776] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G240_M18_marked_dup_metrics.txt [2024-12-20 09:31:48,799] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G240_M18_metrics [2024-12-20 09:31:48,800] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G240_M18_metrics [2024-12-20 09:31:48,800] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G240_M18_metrics [2024-12-20 09:31:48,800] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G240_M18_metrics [2024-12-20 09:31:48,804] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G240_M18_metrics [2024-12-20 09:31:48,855] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G240_M18_hist.pdf [2024-12-20 09:31:48,900] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G240_M18_featureCounts.out [2024-12-20 09:31:48,901] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G240_M18_featureCounts.out [2024-12-20 09:31:48,902] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G240_M18_featureCounts.out [2024-12-20 09:31:48,902] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G240_M18_featureCounts.out [2024-12-20 09:31:48,908] multiqc [DEBUG ] File ignored by vep/vep_html because it exceeded search pattern filesize limit: G240_M18_featureCounts.out [2024-12-20 09:31:48,909] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G240_M18_featureCounts.out [2024-12-20 09:31:48,909] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G240_M18_featureCounts.out [2024-12-20 09:31:48,909] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: G240_M18_featureCounts.out [2024-12-20 09:31:48,909] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: G240_M18_featureCounts.out [2024-12-20 09:31:48,909] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: G240_M18_featureCounts.out [2024-12-20 09:31:48,909] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: G240_M18_featureCounts.out [2024-12-20 09:31:48,909] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: G240_M18_featureCounts.out [2024-12-20 09:31:48,934] multiqc [DEBUG ] File ignored by stacks/sumstats because it exceeded search pattern filesize limit: G240_M18_featureCounts.out [2024-12-20 09:31:49,932] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G240_M18_featureCounts.out [2024-12-20 09:31:49,935] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G240_M18_featureCounts.out [2024-12-20 09:31:49,935] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G240_M18_featureCounts.out [2024-12-20 09:31:49,935] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G240_M18_featureCounts.out [2024-12-20 09:31:49,939] multiqc [DEBUG ] File ignored by vep/vep_html because it exceeded search pattern filesize limit: G240_M18_featureCounts.out [2024-12-20 09:31:49,940] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G240_M18_featureCounts.out [2024-12-20 09:31:49,940] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G240_M18_featureCounts.out [2024-12-20 09:31:49,940] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: G240_M18_featureCounts.out [2024-12-20 09:31:49,940] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: G240_M18_featureCounts.out [2024-12-20 09:31:49,940] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: G240_M18_featureCounts.out [2024-12-20 09:31:49,940] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: G240_M18_featureCounts.out [2024-12-20 09:31:49,940] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: G240_M18_featureCounts.out [2024-12-20 09:31:49,960] multiqc [DEBUG ] File ignored by stacks/sumstats because it exceeded search pattern filesize limit: G240_M18_featureCounts.out [2024-12-20 09:31:50,971] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G240_M18_metrics [2024-12-20 09:31:50,973] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G240_M18_metrics [2024-12-20 09:31:50,976] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G240_M18_metrics [2024-12-20 09:31:51,021] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G240_M15_CKDL240041412-1A_22TG7VLT3_L4_2.fq.gz [2024-12-20 09:31:51,024] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G240_M15_CKDL240041412-1A_22TG7VLT3_L4_1.fq.gz [2024-12-20 09:31:51,042] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G240_M15_primary_unique.bam [2024-12-20 09:31:51,154] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G240_M15_primary_unique.bam.bai [2024-12-20 09:31:51,215] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G240_M15_SJ.out.tab [2024-12-20 09:31:51,217] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G240_M15_SJ.out.tab [2024-12-20 09:31:51,217] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G240_M15_SJ.out.tab [2024-12-20 09:31:51,217] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G240_M15_SJ.out.tab [2024-12-20 09:31:51,220] multiqc [DEBUG ] File ignored by vep/vep_html because it exceeded search pattern filesize limit: G240_M15_SJ.out.tab [2024-12-20 09:31:51,220] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G240_M15_SJ.out.tab [2024-12-20 09:31:51,220] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G240_M15_SJ.out.tab [2024-12-20 09:31:51,220] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: G240_M15_SJ.out.tab [2024-12-20 09:31:51,220] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: G240_M15_SJ.out.tab [2024-12-20 09:31:51,221] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: G240_M15_SJ.out.tab [2024-12-20 09:31:51,221] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: G240_M15_SJ.out.tab [2024-12-20 09:31:51,221] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: G240_M15_SJ.out.tab [2024-12-20 09:31:51,221] multiqc [DEBUG ] File ignored by snpeff because it exceeded search pattern filesize limit: G240_M15_SJ.out.tab [2024-12-20 09:31:51,221] multiqc [DEBUG ] File ignored by stacks/sumstats because it exceeded search pattern filesize limit: G240_M15_SJ.out.tab [2024-12-20 09:31:53,744] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G240_M15_marked_dup_metrics.txt [2024-12-20 09:31:53,746] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G240_M15_marked_dup_metrics.txt [2024-12-20 09:31:53,746] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G240_M15_marked_dup_metrics.txt [2024-12-20 09:31:53,759] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G240_M15_marked_dup_metrics.txt [2024-12-20 09:31:53,764] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G240_M15_marked_dup_metrics.txt [2024-12-20 09:31:53,781] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G240_M15_hist.pdf [2024-12-20 09:31:53,798] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G240_M15_metrics [2024-12-20 09:31:53,800] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G240_M15_metrics [2024-12-20 09:31:53,800] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G240_M15_metrics [2024-12-20 09:31:53,800] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G240_M15_metrics [2024-12-20 09:31:53,804] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G240_M15_metrics [2024-12-20 09:31:53,886] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G240_M15_featureCounts.out [2024-12-20 09:31:53,887] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G240_M15_featureCounts.out [2024-12-20 09:31:53,887] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G240_M15_featureCounts.out [2024-12-20 09:31:53,887] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G240_M15_featureCounts.out [2024-12-20 09:31:53,891] multiqc [DEBUG ] File ignored by vep/vep_html because it exceeded search pattern filesize limit: G240_M15_featureCounts.out [2024-12-20 09:31:53,891] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G240_M15_featureCounts.out [2024-12-20 09:31:53,891] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G240_M15_featureCounts.out [2024-12-20 09:31:53,891] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: G240_M15_featureCounts.out [2024-12-20 09:31:53,891] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: G240_M15_featureCounts.out [2024-12-20 09:31:53,891] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: G240_M15_featureCounts.out [2024-12-20 09:31:53,891] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: G240_M15_featureCounts.out [2024-12-20 09:31:53,891] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: G240_M15_featureCounts.out [2024-12-20 09:31:53,909] multiqc [DEBUG ] File ignored by stacks/sumstats because it exceeded search pattern filesize limit: G240_M15_featureCounts.out [2024-12-20 09:31:54,942] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G240_M15_featureCounts.out [2024-12-20 09:31:54,945] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G240_M15_featureCounts.out [2024-12-20 09:31:54,945] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G240_M15_featureCounts.out [2024-12-20 09:31:54,945] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G240_M15_featureCounts.out [2024-12-20 09:31:54,950] multiqc [DEBUG ] File ignored by vep/vep_html because it exceeded search pattern filesize limit: G240_M15_featureCounts.out [2024-12-20 09:31:54,950] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G240_M15_featureCounts.out [2024-12-20 09:31:54,950] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G240_M15_featureCounts.out [2024-12-20 09:31:54,950] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: G240_M15_featureCounts.out [2024-12-20 09:31:54,950] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: G240_M15_featureCounts.out [2024-12-20 09:31:54,950] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: G240_M15_featureCounts.out [2024-12-20 09:31:54,950] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: G240_M15_featureCounts.out [2024-12-20 09:31:54,950] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: G240_M15_featureCounts.out [2024-12-20 09:31:54,970] multiqc [DEBUG ] File ignored by stacks/sumstats because it exceeded search pattern filesize limit: G240_M15_featureCounts.out [2024-12-20 09:31:55,944] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G240_M15_metrics [2024-12-20 09:31:55,946] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G240_M15_metrics [2024-12-20 09:31:55,949] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G240_M15_metrics [2024-12-20 09:31:55,983] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G240_M06_CKDL240041412-1A_22TG7VLT3_L4_2.fq.gz [2024-12-20 09:31:55,986] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G240_M06_CKDL240041412-1A_22TG7VLT3_L4_1.fq.gz [2024-12-20 09:31:56,035] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G240_M06_SJ.out.tab [2024-12-20 09:31:56,039] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G240_M06_SJ.out.tab [2024-12-20 09:31:56,039] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G240_M06_SJ.out.tab [2024-12-20 09:31:56,039] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G240_M06_SJ.out.tab [2024-12-20 09:31:56,044] multiqc [DEBUG ] File ignored by vep/vep_html because it exceeded search pattern filesize limit: G240_M06_SJ.out.tab [2024-12-20 09:31:56,044] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G240_M06_SJ.out.tab [2024-12-20 09:31:56,044] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G240_M06_SJ.out.tab [2024-12-20 09:31:56,045] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: G240_M06_SJ.out.tab [2024-12-20 09:31:56,045] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: G240_M06_SJ.out.tab [2024-12-20 09:31:56,045] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: G240_M06_SJ.out.tab [2024-12-20 09:31:56,045] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: G240_M06_SJ.out.tab [2024-12-20 09:31:56,045] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: G240_M06_SJ.out.tab [2024-12-20 09:31:56,045] multiqc [DEBUG ] File ignored by snpeff because it exceeded search pattern filesize limit: G240_M06_SJ.out.tab [2024-12-20 09:31:56,045] multiqc [DEBUG ] File ignored by stacks/sumstats because it exceeded search pattern filesize limit: G240_M06_SJ.out.tab [2024-12-20 09:31:58,813] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G240_M06_primary_unique.bam [2024-12-20 09:31:58,815] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G240_M06_primary_unique.bam.bai [2024-12-20 09:31:58,902] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G240_M06_marked_dup_metrics.txt [2024-12-20 09:31:58,905] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G240_M06_marked_dup_metrics.txt [2024-12-20 09:31:58,906] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G240_M06_marked_dup_metrics.txt [2024-12-20 09:31:58,906] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G240_M06_marked_dup_metrics.txt [2024-12-20 09:31:58,911] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G240_M06_marked_dup_metrics.txt [2024-12-20 09:31:58,950] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G240_M06_metrics [2024-12-20 09:31:58,953] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G240_M06_metrics [2024-12-20 09:31:58,953] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G240_M06_metrics [2024-12-20 09:31:58,954] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G240_M06_metrics [2024-12-20 09:31:58,959] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G240_M06_metrics [2024-12-20 09:31:59,051] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G240_M06_hist.pdf [2024-12-20 09:31:59,075] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G240_M06_featureCounts.out [2024-12-20 09:31:59,076] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G240_M06_featureCounts.out [2024-12-20 09:31:59,077] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G240_M06_featureCounts.out [2024-12-20 09:31:59,077] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G240_M06_featureCounts.out [2024-12-20 09:31:59,081] multiqc [DEBUG ] File ignored by vep/vep_html because it exceeded search pattern filesize limit: G240_M06_featureCounts.out [2024-12-20 09:31:59,081] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G240_M06_featureCounts.out [2024-12-20 09:31:59,081] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G240_M06_featureCounts.out [2024-12-20 09:31:59,081] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: G240_M06_featureCounts.out [2024-12-20 09:31:59,081] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: G240_M06_featureCounts.out [2024-12-20 09:31:59,081] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: G240_M06_featureCounts.out [2024-12-20 09:31:59,081] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: G240_M06_featureCounts.out [2024-12-20 09:31:59,081] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: G240_M06_featureCounts.out [2024-12-20 09:31:59,101] multiqc [DEBUG ] File ignored by stacks/sumstats because it exceeded search pattern filesize limit: G240_M06_featureCounts.out [2024-12-20 09:32:00,114] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G240_M06_featureCounts.out [2024-12-20 09:32:00,117] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G240_M06_featureCounts.out [2024-12-20 09:32:00,117] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G240_M06_featureCounts.out [2024-12-20 09:32:00,117] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G240_M06_featureCounts.out [2024-12-20 09:32:00,120] multiqc [DEBUG ] File ignored by vep/vep_html because it exceeded search pattern filesize limit: G240_M06_featureCounts.out [2024-12-20 09:32:00,121] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G240_M06_featureCounts.out [2024-12-20 09:32:00,121] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G240_M06_featureCounts.out [2024-12-20 09:32:00,121] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: G240_M06_featureCounts.out [2024-12-20 09:32:00,121] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: G240_M06_featureCounts.out [2024-12-20 09:32:00,121] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: G240_M06_featureCounts.out [2024-12-20 09:32:00,121] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: G240_M06_featureCounts.out [2024-12-20 09:32:00,121] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: G240_M06_featureCounts.out [2024-12-20 09:32:00,141] multiqc [DEBUG ] File ignored by stacks/sumstats because it exceeded search pattern filesize limit: G240_M06_featureCounts.out [2024-12-20 09:32:01,107] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G240_M06_metrics [2024-12-20 09:32:01,108] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G240_M06_metrics [2024-12-20 09:32:01,112] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G240_M06_metrics [2024-12-20 09:32:01,155] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G240_M03_CKDL240041412-1A_22TG7VLT3_L4_2.fq.gz [2024-12-20 09:32:01,157] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G240_M03_CKDL240041412-1A_22TG7VLT3_L4_1.fq.gz [2024-12-20 09:32:01,173] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G240_M03_primary_unique.bam [2024-12-20 09:32:01,201] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G240_M03_SJ.out.tab [2024-12-20 09:32:01,204] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G240_M03_SJ.out.tab [2024-12-20 09:32:01,204] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G240_M03_SJ.out.tab [2024-12-20 09:32:01,204] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G240_M03_SJ.out.tab [2024-12-20 09:32:01,210] multiqc [DEBUG ] File ignored by vep/vep_html because it exceeded search pattern filesize limit: G240_M03_SJ.out.tab [2024-12-20 09:32:01,210] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G240_M03_SJ.out.tab [2024-12-20 09:32:01,210] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G240_M03_SJ.out.tab [2024-12-20 09:32:01,210] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: G240_M03_SJ.out.tab [2024-12-20 09:32:01,211] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: G240_M03_SJ.out.tab [2024-12-20 09:32:01,211] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: G240_M03_SJ.out.tab [2024-12-20 09:32:01,211] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: G240_M03_SJ.out.tab [2024-12-20 09:32:01,211] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: G240_M03_SJ.out.tab [2024-12-20 09:32:01,211] multiqc [DEBUG ] File ignored by snpeff because it exceeded search pattern filesize limit: G240_M03_SJ.out.tab [2024-12-20 09:32:01,211] multiqc [DEBUG ] File ignored by stacks/sumstats because it exceeded search pattern filesize limit: G240_M03_SJ.out.tab [2024-12-20 09:32:03,394] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G240_M03_primary_unique.bam.bai [2024-12-20 09:32:03,452] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G240_M03_marked_dup_metrics.txt [2024-12-20 09:32:03,453] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G240_M03_marked_dup_metrics.txt [2024-12-20 09:32:03,453] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G240_M03_marked_dup_metrics.txt [2024-12-20 09:32:03,454] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G240_M03_marked_dup_metrics.txt [2024-12-20 09:32:03,457] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G240_M03_marked_dup_metrics.txt [2024-12-20 09:32:03,468] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G240_M03_hist.pdf [2024-12-20 09:32:03,487] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G240_M03_metrics [2024-12-20 09:32:03,488] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G240_M03_metrics [2024-12-20 09:32:03,488] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G240_M03_metrics [2024-12-20 09:32:03,489] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G240_M03_metrics [2024-12-20 09:32:03,492] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G240_M03_metrics [2024-12-20 09:32:03,584] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G240_M03_featureCounts.out [2024-12-20 09:32:03,586] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G240_M03_featureCounts.out [2024-12-20 09:32:03,587] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G240_M03_featureCounts.out [2024-12-20 09:32:03,587] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G240_M03_featureCounts.out [2024-12-20 09:32:03,593] multiqc [DEBUG ] File ignored by vep/vep_html because it exceeded search pattern filesize limit: G240_M03_featureCounts.out [2024-12-20 09:32:03,593] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G240_M03_featureCounts.out [2024-12-20 09:32:03,593] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G240_M03_featureCounts.out [2024-12-20 09:32:03,593] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: G240_M03_featureCounts.out [2024-12-20 09:32:03,593] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: G240_M03_featureCounts.out [2024-12-20 09:32:03,593] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: G240_M03_featureCounts.out [2024-12-20 09:32:03,593] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: G240_M03_featureCounts.out [2024-12-20 09:32:03,593] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: G240_M03_featureCounts.out [2024-12-20 09:32:03,615] multiqc [DEBUG ] File ignored by stacks/sumstats because it exceeded search pattern filesize limit: G240_M03_featureCounts.out [2024-12-20 09:32:04,650] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G240_M03_featureCounts.out [2024-12-20 09:32:04,653] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G240_M03_featureCounts.out [2024-12-20 09:32:04,653] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G240_M03_featureCounts.out [2024-12-20 09:32:04,653] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G240_M03_featureCounts.out [2024-12-20 09:32:04,657] multiqc [DEBUG ] File ignored by vep/vep_html because it exceeded search pattern filesize limit: G240_M03_featureCounts.out [2024-12-20 09:32:04,657] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G240_M03_featureCounts.out [2024-12-20 09:32:04,657] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G240_M03_featureCounts.out [2024-12-20 09:32:04,657] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: G240_M03_featureCounts.out [2024-12-20 09:32:04,657] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: G240_M03_featureCounts.out [2024-12-20 09:32:04,657] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: G240_M03_featureCounts.out [2024-12-20 09:32:04,657] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: G240_M03_featureCounts.out [2024-12-20 09:32:04,657] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: G240_M03_featureCounts.out [2024-12-20 09:32:04,676] multiqc [DEBUG ] File ignored by stacks/sumstats because it exceeded search pattern filesize limit: G240_M03_featureCounts.out [2024-12-20 09:32:05,658] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G240_M03_metrics [2024-12-20 09:32:05,659] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G240_M03_metrics [2024-12-20 09:32:05,663] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G240_M03_metrics [2024-12-20 09:32:05,708] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G240_M38_CKDL240041412-1A_22TG7VLT3_L4_1.fq.gz [2024-12-20 09:32:05,710] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G240_M38_CKDL240041412-1A_22TG7VLT3_L4_2.fq.gz [2024-12-20 09:32:05,773] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G240_M38_SJ.out.tab [2024-12-20 09:32:05,775] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G240_M38_SJ.out.tab [2024-12-20 09:32:05,776] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G240_M38_SJ.out.tab [2024-12-20 09:32:05,776] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G240_M38_SJ.out.tab [2024-12-20 09:32:05,780] multiqc [DEBUG ] File ignored by vep/vep_html because it exceeded search pattern filesize limit: G240_M38_SJ.out.tab [2024-12-20 09:32:05,780] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G240_M38_SJ.out.tab [2024-12-20 09:32:05,780] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G240_M38_SJ.out.tab [2024-12-20 09:32:05,781] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: G240_M38_SJ.out.tab [2024-12-20 09:32:05,781] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: G240_M38_SJ.out.tab [2024-12-20 09:32:05,781] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: G240_M38_SJ.out.tab [2024-12-20 09:32:05,781] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: G240_M38_SJ.out.tab [2024-12-20 09:32:05,781] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: G240_M38_SJ.out.tab [2024-12-20 09:32:05,781] multiqc [DEBUG ] File ignored by snpeff because it exceeded search pattern filesize limit: G240_M38_SJ.out.tab [2024-12-20 09:32:05,781] multiqc [DEBUG ] File ignored by stacks/sumstats because it exceeded search pattern filesize limit: G240_M38_SJ.out.tab [2024-12-20 09:32:08,497] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G240_M38_primary_unique.bam [2024-12-20 09:32:08,591] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G240_M38_primary_unique.bam.bai [2024-12-20 09:32:08,610] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G240_M38_marked_dup_metrics.txt [2024-12-20 09:32:08,613] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G240_M38_marked_dup_metrics.txt [2024-12-20 09:32:08,613] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G240_M38_marked_dup_metrics.txt [2024-12-20 09:32:08,613] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G240_M38_marked_dup_metrics.txt [2024-12-20 09:32:08,619] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G240_M38_marked_dup_metrics.txt [2024-12-20 09:32:08,655] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G240_M38_metrics [2024-12-20 09:32:08,659] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G240_M38_metrics [2024-12-20 09:32:08,659] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G240_M38_metrics [2024-12-20 09:32:08,659] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G240_M38_metrics [2024-12-20 09:32:08,664] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G240_M38_metrics [2024-12-20 09:32:08,722] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G240_M38_hist.pdf [2024-12-20 09:32:08,756] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G240_M38_featureCounts.out [2024-12-20 09:32:08,759] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G240_M38_featureCounts.out [2024-12-20 09:32:08,760] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G240_M38_featureCounts.out [2024-12-20 09:32:08,760] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G240_M38_featureCounts.out [2024-12-20 09:32:08,764] multiqc [DEBUG ] File ignored by vep/vep_html because it exceeded search pattern filesize limit: G240_M38_featureCounts.out [2024-12-20 09:32:08,765] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G240_M38_featureCounts.out [2024-12-20 09:32:08,765] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G240_M38_featureCounts.out [2024-12-20 09:32:08,765] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: G240_M38_featureCounts.out [2024-12-20 09:32:08,765] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: G240_M38_featureCounts.out [2024-12-20 09:32:08,765] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: G240_M38_featureCounts.out [2024-12-20 09:32:08,765] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: G240_M38_featureCounts.out [2024-12-20 09:32:08,765] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: G240_M38_featureCounts.out [2024-12-20 09:32:08,787] multiqc [DEBUG ] File ignored by stacks/sumstats because it exceeded search pattern filesize limit: G240_M38_featureCounts.out [2024-12-20 09:32:09,825] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G240_M38_featureCounts.out [2024-12-20 09:32:09,827] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G240_M38_featureCounts.out [2024-12-20 09:32:09,843] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G240_M38_featureCounts.out [2024-12-20 09:32:09,843] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G240_M38_featureCounts.out [2024-12-20 09:32:09,847] multiqc [DEBUG ] File ignored by vep/vep_html because it exceeded search pattern filesize limit: G240_M38_featureCounts.out [2024-12-20 09:32:09,847] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G240_M38_featureCounts.out [2024-12-20 09:32:09,847] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G240_M38_featureCounts.out [2024-12-20 09:32:09,847] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: G240_M38_featureCounts.out [2024-12-20 09:32:09,847] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: G240_M38_featureCounts.out [2024-12-20 09:32:09,847] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: G240_M38_featureCounts.out [2024-12-20 09:32:09,847] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: G240_M38_featureCounts.out [2024-12-20 09:32:09,847] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: G240_M38_featureCounts.out [2024-12-20 09:32:09,867] multiqc [DEBUG ] File ignored by stacks/sumstats because it exceeded search pattern filesize limit: G240_M38_featureCounts.out [2024-12-20 09:32:10,897] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G240_M38_metrics [2024-12-20 09:32:10,899] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G240_M38_metrics [2024-12-20 09:32:10,902] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G240_M38_metrics [2024-12-20 09:32:10,935] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Summarize_Jobs.sh [2024-12-20 09:32:10,937] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Summarize_Jobs.sh [2024-12-20 09:32:10,940] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Summarize_Jobs.sh [2024-12-20 09:32:10,950] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Parameter_Descriptions.txt [2024-12-20 09:32:10,952] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Parameter_Descriptions.txt [2024-12-20 09:32:10,955] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Parameter_Descriptions.txt [2024-12-20 09:32:10,965] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Run_Jobs.sh [2024-12-20 09:32:10,966] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Run_Jobs.sh [2024-12-20 09:32:10,979] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: FASTQC.qsub [2024-12-20 09:32:10,981] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: FASTQC.qsub [2024-12-20 09:32:10,984] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: FASTQC.qsub [2024-12-20 09:32:10,995] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: fastq_reads.qsub [2024-12-20 09:32:10,997] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: fastq_reads.qsub [2024-12-20 09:32:11,016] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_03_G240_RNASEQ_G240_M05.o1630272 [2024-12-20 09:32:11,018] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_03_G240_RNASEQ_G240_M05.o1630272 [2024-12-20 09:32:11,022] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_03_G240_RNASEQ_G240_M05.o1630272 [2024-12-20 09:32:11,033] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_03_G240_RNASEQ_G240_M09.o1630276 [2024-12-20 09:32:11,034] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_03_G240_RNASEQ_G240_M09.o1630276 [2024-12-20 09:32:11,037] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_03_G240_RNASEQ_G240_M09.o1630276 [2024-12-20 09:32:11,052] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_03_G240_RNASEQ_G240_M24.o1630292 [2024-12-20 09:32:11,055] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_03_G240_RNASEQ_G240_M24.o1630292 [2024-12-20 09:32:11,058] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_03_G240_RNASEQ_G240_M24.o1630292 [2024-12-20 09:32:11,138] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_03_G240_RNASEQ_G240_M26.o1630294 [2024-12-20 09:32:11,153] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_03_G240_RNASEQ_G240_M26.o1630294 [2024-12-20 09:32:11,159] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_03_G240_RNASEQ_G240_M26.o1630294 [2024-12-20 09:32:11,174] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_03_G240_RNASEQ_G240_M03.o1630270 [2024-12-20 09:32:11,176] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_03_G240_RNASEQ_G240_M03.o1630270 [2024-12-20 09:32:11,179] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_03_G240_RNASEQ_G240_M03.o1630270 [2024-12-20 09:32:11,190] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_03_G240_RNASEQ_G240_M23.o1630291 [2024-12-20 09:32:11,192] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_03_G240_RNASEQ_G240_M23.o1630291 [2024-12-20 09:32:11,195] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_03_G240_RNASEQ_G240_M23.o1630291 [2024-12-20 09:32:11,206] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_03_G240_RNASEQ_G240_M32.o1630300 [2024-12-20 09:32:11,208] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_03_G240_RNASEQ_G240_M32.o1630300 [2024-12-20 09:32:11,211] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_03_G240_RNASEQ_G240_M32.o1630300 [2024-12-20 09:32:11,222] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_03_G240_RNASEQ_G240_M16.o1630283 [2024-12-20 09:32:11,224] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_03_G240_RNASEQ_G240_M16.o1630283 [2024-12-20 09:32:11,227] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_03_G240_RNASEQ_G240_M16.o1630283 [2024-12-20 09:32:11,238] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_03_G240_RNASEQ_G240_M27.o1630295 [2024-12-20 09:32:11,240] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_03_G240_RNASEQ_G240_M27.o1630295 [2024-12-20 09:32:11,243] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_03_G240_RNASEQ_G240_M27.o1630295 [2024-12-20 09:32:11,254] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_03_G240_RNASEQ_G240_M35.o1630303 [2024-12-20 09:32:11,258] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_03_G240_RNASEQ_G240_M35.o1630303 [2024-12-20 09:32:11,264] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_03_G240_RNASEQ_G240_M35.o1630303 [2024-12-20 09:32:11,278] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_03_G240_RNASEQ_G240_M19.o1630286 [2024-12-20 09:32:11,280] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_03_G240_RNASEQ_G240_M19.o1630286 [2024-12-20 09:32:11,284] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_03_G240_RNASEQ_G240_M19.o1630286 [2024-12-20 09:32:11,294] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_03_G240_RNASEQ_G240_M25.o1630293 [2024-12-20 09:32:11,297] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_03_G240_RNASEQ_G240_M25.o1630293 [2024-12-20 09:32:11,300] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_03_G240_RNASEQ_G240_M25.o1630293 [2024-12-20 09:32:11,436] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_03_G240_RNASEQ_G240_M10.o1630277 [2024-12-20 09:32:11,438] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_03_G240_RNASEQ_G240_M10.o1630277 [2024-12-20 09:32:11,443] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_03_G240_RNASEQ_G240_M10.o1630277 [2024-12-20 09:32:11,454] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_03_G240_RNASEQ_G240_M31.o1630299 [2024-12-20 09:32:11,456] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_03_G240_RNASEQ_G240_M31.o1630299 [2024-12-20 09:32:11,459] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_03_G240_RNASEQ_G240_M31.o1630299 [2024-12-20 09:32:11,469] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_03_G240_RNASEQ_G240_M33.o1630301 [2024-12-20 09:32:11,471] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_03_G240_RNASEQ_G240_M33.o1630301 [2024-12-20 09:32:11,474] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_03_G240_RNASEQ_G240_M33.o1630301 [2024-12-20 09:32:11,483] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_03_G240_RNASEQ_G240_M07.o1630274 [2024-12-20 09:32:11,485] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_03_G240_RNASEQ_G240_M07.o1630274 [2024-12-20 09:32:11,488] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_03_G240_RNASEQ_G240_M07.o1630274 [2024-12-20 09:32:11,498] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_03_G240_RNASEQ_G240_M29.o1630297 [2024-12-20 09:32:11,501] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_03_G240_RNASEQ_G240_M29.o1630297 [2024-12-20 09:32:11,507] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_03_G240_RNASEQ_G240_M29.o1630297 [2024-12-20 09:32:11,520] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_03_G240_RNASEQ_G240_M06.o1630273 [2024-12-20 09:32:11,522] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_03_G240_RNASEQ_G240_M06.o1630273 [2024-12-20 09:32:11,525] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_03_G240_RNASEQ_G240_M06.o1630273 [2024-12-20 09:32:11,535] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_03_G240_RNASEQ_G240_M30.o1630298 [2024-12-20 09:32:11,537] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_03_G240_RNASEQ_G240_M30.o1630298 [2024-12-20 09:32:11,540] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_03_G240_RNASEQ_G240_M30.o1630298 [2024-12-20 09:32:11,558] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_03_G240_RNASEQ_G240_M12.o1630279 [2024-12-20 09:32:11,561] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_03_G240_RNASEQ_G240_M12.o1630279 [2024-12-20 09:32:11,564] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_03_G240_RNASEQ_G240_M12.o1630279 [2024-12-20 09:32:11,575] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_03_G240_RNASEQ_G240_M18.o1630285 [2024-12-20 09:32:11,578] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_03_G240_RNASEQ_G240_M18.o1630285 [2024-12-20 09:32:11,581] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_03_G240_RNASEQ_G240_M18.o1630285 [2024-12-20 09:32:11,591] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_03_G240_RNASEQ_G240_M39.o1630307 [2024-12-20 09:32:11,594] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_03_G240_RNASEQ_G240_M39.o1630307 [2024-12-20 09:32:11,597] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_03_G240_RNASEQ_G240_M39.o1630307 [2024-12-20 09:32:11,611] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_03_G240_RNASEQ_G240_M38.o1630306 [2024-12-20 09:32:11,615] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_03_G240_RNASEQ_G240_M38.o1630306 [2024-12-20 09:32:11,620] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_03_G240_RNASEQ_G240_M38.o1630306 [2024-12-20 09:32:11,700] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_03_G240_RNASEQ_G240_M13.o1630280 [2024-12-20 09:32:11,740] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_03_G240_RNASEQ_G240_M13.o1630280 [2024-12-20 09:32:11,756] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_03_G240_RNASEQ_G240_M13.o1630280 [2024-12-20 09:32:11,771] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_03_G240_RNASEQ_G240_M34.o1630302 [2024-12-20 09:32:11,773] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_03_G240_RNASEQ_G240_M34.o1630302 [2024-12-20 09:32:11,776] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_03_G240_RNASEQ_G240_M34.o1630302 [2024-12-20 09:32:11,786] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_03_G240_RNASEQ_G240_M15.o1630282 [2024-12-20 09:32:11,788] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_03_G240_RNASEQ_G240_M15.o1630282 [2024-12-20 09:32:11,791] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_03_G240_RNASEQ_G240_M15.o1630282 [2024-12-20 09:32:11,801] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_03_G240_RNASEQ_G240_M02.o1630269 [2024-12-20 09:32:11,804] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_03_G240_RNASEQ_G240_M02.o1630269 [2024-12-20 09:32:11,807] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_03_G240_RNASEQ_G240_M02.o1630269 [2024-12-20 09:32:11,817] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_03_G240_RNASEQ_G240_M36.o1630304 [2024-12-20 09:32:11,819] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_03_G240_RNASEQ_G240_M36.o1630304 [2024-12-20 09:32:11,822] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_03_G240_RNASEQ_G240_M36.o1630304 [2024-12-20 09:32:11,833] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_03_G240_RNASEQ_G240_M22.o1630290 [2024-12-20 09:32:11,835] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_03_G240_RNASEQ_G240_M22.o1630290 [2024-12-20 09:32:11,838] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_03_G240_RNASEQ_G240_M22.o1630290 [2024-12-20 09:32:11,851] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_03_G240_RNASEQ_G240_M04.o1630271 [2024-12-20 09:32:11,853] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_03_G240_RNASEQ_G240_M04.o1630271 [2024-12-20 09:32:11,857] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_03_G240_RNASEQ_G240_M04.o1630271 [2024-12-20 09:32:11,867] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_03_G240_RNASEQ_G240_M21.o1630288 [2024-12-20 09:32:11,869] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_03_G240_RNASEQ_G240_M21.o1630288 [2024-12-20 09:32:11,873] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_03_G240_RNASEQ_G240_M21.o1630288 [2024-12-20 09:32:11,883] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_03_G240_RNASEQ_G240_M11.o1630278 [2024-12-20 09:32:11,885] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_03_G240_RNASEQ_G240_M11.o1630278 [2024-12-20 09:32:11,889] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_03_G240_RNASEQ_G240_M11.o1630278 [2024-12-20 09:32:11,899] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_03_G240_RNASEQ_G240_M17.o1630284 [2024-12-20 09:32:11,901] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_03_G240_RNASEQ_G240_M17.o1630284 [2024-12-20 09:32:11,904] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_03_G240_RNASEQ_G240_M17.o1630284 [2024-12-20 09:32:11,914] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_03_G240_RNASEQ_G240_M08.o1630275 [2024-12-20 09:32:11,916] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_03_G240_RNASEQ_G240_M08.o1630275 [2024-12-20 09:32:11,940] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_03_G240_RNASEQ_G240_M08.o1630275 [2024-12-20 09:32:12,033] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_03_G240_RNASEQ_G240_M37.o1630305 [2024-12-20 09:32:12,035] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_03_G240_RNASEQ_G240_M37.o1630305 [2024-12-20 09:32:12,039] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_03_G240_RNASEQ_G240_M37.o1630305 [2024-12-20 09:32:12,049] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_03_G240_RNASEQ_G240_M01.o1630268 [2024-12-20 09:32:12,051] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_03_G240_RNASEQ_G240_M01.o1630268 [2024-12-20 09:32:12,054] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_03_G240_RNASEQ_G240_M01.o1630268 [2024-12-20 09:32:12,065] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_03_G240_RNASEQ_G240_M20.o1630287 [2024-12-20 09:32:12,067] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_03_G240_RNASEQ_G240_M20.o1630287 [2024-12-20 09:32:12,071] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_03_G240_RNASEQ_G240_M20.o1630287 [2024-12-20 09:32:12,085] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_03_G240_RNASEQ_G240_M28.o1630296 [2024-12-20 09:32:12,089] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_03_G240_RNASEQ_G240_M28.o1630296 [2024-12-20 09:32:12,093] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_03_G240_RNASEQ_G240_M28.o1630296 [2024-12-20 09:32:12,105] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_03_G240_RNASEQ_G240_M14.o1630281 [2024-12-20 09:32:12,107] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_03_G240_RNASEQ_G240_M14.o1630281 [2024-12-20 09:32:12,110] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_03_G240_RNASEQ_G240_M14.o1630281 [2024-12-20 09:32:12,135] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: number_of_unique_reads.csv [2024-12-20 09:32:12,136] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: number_of_unique_reads.csv [2024-12-20 09:32:12,137] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: number_of_unique_reads.csv [2024-12-20 09:32:12,137] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: number_of_unique_reads.csv [2024-12-20 09:32:12,140] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: number_of_unique_reads.csv [2024-12-20 09:32:12,178] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:12,188] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:12,190] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:12,190] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:12,214] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:12,214] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:12,214] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:12,214] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:12,214] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:12,214] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:12,214] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:12,328] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:12,337] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:12,340] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:12,340] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:12,362] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:12,362] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:12,362] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:12,362] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:12,362] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:12,362] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:12,362] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:12,478] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:12,497] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:12,499] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:12,499] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:12,524] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:12,524] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:12,524] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:12,524] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:12,524] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:12,524] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:12,524] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:12,635] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:12,645] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:12,647] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:12,647] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:12,670] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:12,670] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:12,670] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:12,670] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:12,670] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:12,670] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:12,670] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:12,761] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: fastp.html [2024-12-20 09:32:12,764] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: fastp.html [2024-12-20 09:32:12,764] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: fastp.html [2024-12-20 09:32:12,764] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: fastp.html [2024-12-20 09:32:12,767] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: fastp.html [2024-12-20 09:32:12,767] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: fastp.html [2024-12-20 09:32:12,888] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:12,898] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:12,900] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:12,900] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:12,921] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:12,922] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:12,922] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:12,922] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:12,922] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:12,922] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:12,922] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:13,025] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: fastp.html [2024-12-20 09:32:13,028] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: fastp.html [2024-12-20 09:32:13,028] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: fastp.html [2024-12-20 09:32:13,028] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: fastp.html [2024-12-20 09:32:13,033] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: fastp.html [2024-12-20 09:32:13,033] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: fastp.html [2024-12-20 09:32:13,161] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:13,172] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:13,174] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:13,174] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:13,195] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:13,195] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:13,195] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:13,195] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:13,195] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:13,195] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:13,195] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:13,309] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:13,318] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:13,320] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:13,320] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:13,342] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:13,342] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:13,342] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:13,342] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:13,342] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:13,342] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:13,342] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:13,455] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:13,464] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:13,466] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:13,466] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:13,487] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:13,487] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:13,487] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:13,487] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:13,487] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:13,487] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:13,487] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:13,602] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:13,612] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:13,613] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:13,614] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:13,634] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:13,634] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:13,634] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:13,634] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:13,635] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:13,635] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:13,635] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:14,082] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: fastp.html [2024-12-20 09:32:14,127] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: fastp.html [2024-12-20 09:32:14,131] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: fastp.html [2024-12-20 09:32:14,131] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: fastp.html [2024-12-20 09:32:14,199] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: fastp.html [2024-12-20 09:32:14,199] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: fastp.html [2024-12-20 09:32:14,423] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: fastp.html [2024-12-20 09:32:14,425] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: fastp.html [2024-12-20 09:32:14,425] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: fastp.html [2024-12-20 09:32:14,425] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: fastp.html [2024-12-20 09:32:14,429] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: fastp.html [2024-12-20 09:32:14,429] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: fastp.html [2024-12-20 09:32:14,543] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: fastp.html [2024-12-20 09:32:14,545] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: fastp.html [2024-12-20 09:32:14,545] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: fastp.html [2024-12-20 09:32:14,545] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: fastp.html [2024-12-20 09:32:14,549] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: fastp.html [2024-12-20 09:32:14,549] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: fastp.html [2024-12-20 09:32:14,683] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:14,695] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:14,697] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:14,697] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:14,722] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:14,723] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:14,723] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:14,723] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:14,723] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:14,723] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:14,723] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:14,838] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:14,847] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:14,853] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:14,853] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:14,877] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:14,877] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:14,877] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:14,877] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:14,877] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:14,877] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:14,877] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:15,013] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:15,023] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:15,024] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:15,024] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:15,046] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:15,047] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:15,047] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:15,047] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:15,047] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:15,047] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:15,047] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:15,154] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:15,163] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:15,164] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:15,164] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:15,185] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:15,185] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:15,185] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:15,185] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:15,185] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:15,185] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:15,185] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:15,404] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: fastp.html [2024-12-20 09:32:15,406] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: fastp.html [2024-12-20 09:32:15,407] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: fastp.html [2024-12-20 09:32:15,407] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: fastp.html [2024-12-20 09:32:15,411] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: fastp.html [2024-12-20 09:32:15,411] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: fastp.html [2024-12-20 09:32:15,526] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: fastp.html [2024-12-20 09:32:15,528] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: fastp.html [2024-12-20 09:32:15,529] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: fastp.html [2024-12-20 09:32:15,529] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: fastp.html [2024-12-20 09:32:15,532] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: fastp.html [2024-12-20 09:32:15,532] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: fastp.html [2024-12-20 09:32:15,674] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:15,683] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:15,685] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:15,685] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:15,707] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:15,707] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:15,707] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:15,707] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:15,707] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:15,707] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:15,707] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:15,822] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:15,831] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:15,833] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:15,833] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:15,856] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:15,856] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:15,856] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:15,856] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:15,856] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:15,856] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:15,856] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:15,954] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: fastp.html [2024-12-20 09:32:15,957] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: fastp.html [2024-12-20 09:32:15,957] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: fastp.html [2024-12-20 09:32:15,957] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: fastp.html [2024-12-20 09:32:15,961] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: fastp.html [2024-12-20 09:32:15,961] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: fastp.html [2024-12-20 09:32:16,083] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: fastp.html [2024-12-20 09:32:16,085] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: fastp.html [2024-12-20 09:32:16,085] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: fastp.html [2024-12-20 09:32:16,085] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: fastp.html [2024-12-20 09:32:16,089] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: fastp.html [2024-12-20 09:32:16,089] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: fastp.html [2024-12-20 09:32:16,216] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:16,225] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:16,227] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:16,227] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:16,251] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:16,251] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:16,251] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:16,251] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:16,251] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:16,251] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:16,251] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:16,361] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:16,371] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:16,373] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:16,373] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:16,396] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:16,396] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:16,396] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:16,396] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:16,396] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:16,396] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:16,396] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:16,507] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:16,517] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:16,519] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:16,519] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:16,541] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:16,542] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:16,542] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:16,542] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:16,542] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:16,542] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:16,542] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:16,656] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:16,667] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:16,669] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:16,669] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:16,693] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:16,693] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:16,693] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:16,693] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:16,693] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:16,693] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:16,693] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:16,826] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:16,834] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:16,836] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:16,836] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:16,857] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:16,857] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:16,857] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:16,857] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:16,857] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:16,857] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:16,857] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:16,960] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:16,970] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:16,972] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:16,972] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:16,999] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:16,999] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:16,999] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:16,999] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:16,999] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:16,999] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:16,999] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:17,159] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: fastp.html [2024-12-20 09:32:17,161] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: fastp.html [2024-12-20 09:32:17,161] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: fastp.html [2024-12-20 09:32:17,161] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: fastp.html [2024-12-20 09:32:17,165] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: fastp.html [2024-12-20 09:32:17,165] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: fastp.html [2024-12-20 09:32:17,269] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: fastp.html [2024-12-20 09:32:17,271] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: fastp.html [2024-12-20 09:32:17,271] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: fastp.html [2024-12-20 09:32:17,271] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: fastp.html [2024-12-20 09:32:17,274] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: fastp.html [2024-12-20 09:32:17,275] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: fastp.html [2024-12-20 09:32:17,394] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: fastp.html [2024-12-20 09:32:17,396] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: fastp.html [2024-12-20 09:32:17,396] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: fastp.html [2024-12-20 09:32:17,396] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: fastp.html [2024-12-20 09:32:17,400] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: fastp.html [2024-12-20 09:32:17,400] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: fastp.html [2024-12-20 09:32:17,537] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:17,546] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:17,548] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:17,548] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:17,569] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:17,569] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:17,569] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:17,569] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:17,569] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:17,569] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:17,569] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:17,667] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: fastp.html [2024-12-20 09:32:17,670] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: fastp.html [2024-12-20 09:32:17,671] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: fastp.html [2024-12-20 09:32:17,671] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: fastp.html [2024-12-20 09:32:17,678] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: fastp.html [2024-12-20 09:32:17,678] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: fastp.html [2024-12-20 09:32:17,818] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:17,828] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:17,830] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:17,830] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:17,852] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:17,852] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:17,852] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:17,852] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:17,852] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:17,852] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:17,852] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:17,959] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:17,969] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:17,971] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:17,971] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:18,061] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:18,061] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:18,061] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:18,061] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:18,061] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:18,061] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:18,062] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:18,176] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:18,189] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:18,191] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:18,191] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:18,214] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:18,214] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:18,214] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:18,214] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:18,214] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:18,214] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:18,214] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:18,312] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: fastp.html [2024-12-20 09:32:18,314] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: fastp.html [2024-12-20 09:32:18,315] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: fastp.html [2024-12-20 09:32:18,315] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: fastp.html [2024-12-20 09:32:18,318] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: fastp.html [2024-12-20 09:32:18,319] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: fastp.html [2024-12-20 09:32:18,448] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:18,458] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:18,460] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:18,460] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:18,483] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:18,483] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:18,483] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:18,483] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:18,483] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:18,483] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:18,483] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:18,602] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:18,612] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:18,614] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:18,614] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:18,639] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:18,639] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:18,639] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:18,639] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:18,639] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:18,639] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:18,639] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:18,934] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:18,943] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:18,945] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:18,945] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:18,966] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:18,967] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:18,967] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:18,967] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:18,967] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:18,967] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:18,967] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:19,080] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: fastp.html [2024-12-20 09:32:19,082] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: fastp.html [2024-12-20 09:32:19,082] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: fastp.html [2024-12-20 09:32:19,082] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: fastp.html [2024-12-20 09:32:19,086] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: fastp.html [2024-12-20 09:32:19,086] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: fastp.html [2024-12-20 09:32:19,223] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:19,233] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:19,235] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:19,235] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:19,256] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:19,256] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:19,256] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:19,256] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:19,256] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:19,256] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:19,256] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:19,396] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: fastp.html [2024-12-20 09:32:19,426] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: fastp.html [2024-12-20 09:32:19,431] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: fastp.html [2024-12-20 09:32:19,431] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: fastp.html [2024-12-20 09:32:19,464] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: fastp.html [2024-12-20 09:32:19,465] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: fastp.html [2024-12-20 09:32:19,587] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: fastp.html [2024-12-20 09:32:19,601] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: fastp.html [2024-12-20 09:32:19,605] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: fastp.html [2024-12-20 09:32:19,605] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: fastp.html [2024-12-20 09:32:19,669] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: fastp.html [2024-12-20 09:32:19,670] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: fastp.html [2024-12-20 09:32:19,793] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: fastp.html [2024-12-20 09:32:19,795] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: fastp.html [2024-12-20 09:32:19,796] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: fastp.html [2024-12-20 09:32:19,796] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: fastp.html [2024-12-20 09:32:19,800] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: fastp.html [2024-12-20 09:32:19,800] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: fastp.html [2024-12-20 09:32:19,932] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:19,943] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:19,953] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:19,953] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:19,975] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:19,975] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:19,975] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:19,975] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:19,975] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:19,975] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:19,976] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:20,345] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:20,354] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:20,355] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:20,355] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:20,377] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:20,377] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:20,377] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:20,377] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:20,377] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:20,377] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:20,377] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:20,473] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: fastp.html [2024-12-20 09:32:20,475] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: fastp.html [2024-12-20 09:32:20,475] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: fastp.html [2024-12-20 09:32:20,475] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: fastp.html [2024-12-20 09:32:20,479] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: fastp.html [2024-12-20 09:32:20,479] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: fastp.html [2024-12-20 09:32:20,588] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: fastp.html [2024-12-20 09:32:20,589] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: fastp.html [2024-12-20 09:32:20,590] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: fastp.html [2024-12-20 09:32:20,590] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: fastp.html [2024-12-20 09:32:20,593] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: fastp.html [2024-12-20 09:32:20,593] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: fastp.html [2024-12-20 09:32:20,788] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:20,799] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:20,802] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:20,802] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:20,824] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:20,824] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:20,824] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:20,824] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:20,824] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:20,824] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:20,825] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:20,929] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:20,938] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:20,939] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:20,939] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:20,962] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:20,962] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:20,962] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:20,962] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:20,962] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:20,962] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:20,962] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:21,073] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:21,082] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:21,084] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:21,084] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:21,107] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:21,108] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:21,108] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:21,108] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:21,108] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:21,108] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:21,108] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:21,224] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:21,234] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:21,236] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:21,236] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:21,303] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:21,303] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:21,303] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:21,303] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:21,303] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:21,303] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:21,303] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:21,484] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: fastp.html [2024-12-20 09:32:21,486] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: fastp.html [2024-12-20 09:32:21,486] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: fastp.html [2024-12-20 09:32:21,487] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: fastp.html [2024-12-20 09:32:21,490] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: fastp.html [2024-12-20 09:32:21,490] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: fastp.html [2024-12-20 09:32:21,631] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:21,641] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:21,643] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:21,643] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:21,676] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:21,676] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:21,677] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:21,677] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:21,677] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:21,677] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:21,677] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:21,849] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:21,859] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:21,861] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:21,861] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:21,883] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:21,884] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:21,884] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:21,884] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:21,884] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:21,884] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:21,884] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:21,988] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:21,998] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:22,000] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:22,000] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:22,022] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:22,022] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:22,022] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:22,022] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:22,022] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:22,022] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:22,022] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:22,207] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:22,217] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:22,219] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:22,219] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:22,244] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:22,244] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:22,244] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:22,244] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:22,244] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:22,244] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:22,244] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:22,383] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:22,423] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:22,428] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:22,429] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:22,509] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:22,509] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:22,509] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:22,509] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:22,509] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:22,509] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:22,509] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:22,700] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: fastp.html [2024-12-20 09:32:22,701] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: fastp.html [2024-12-20 09:32:22,702] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: fastp.html [2024-12-20 09:32:22,702] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: fastp.html [2024-12-20 09:32:22,705] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: fastp.html [2024-12-20 09:32:22,705] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: fastp.html [2024-12-20 09:32:22,838] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:22,848] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:22,850] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:22,850] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:22,874] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:22,874] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:22,874] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:22,874] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:22,874] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:22,874] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:22,874] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:23,005] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:23,015] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:23,018] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:23,018] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:23,041] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:23,041] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:23,041] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:23,041] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:23,041] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:23,041] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:23,041] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:23,161] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:23,171] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:23,173] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:23,173] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:23,194] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:23,194] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:23,194] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:23,194] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:23,194] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:23,194] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:23,194] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:23,288] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: fastp.html [2024-12-20 09:32:23,290] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: fastp.html [2024-12-20 09:32:23,290] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: fastp.html [2024-12-20 09:32:23,291] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: fastp.html [2024-12-20 09:32:23,296] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: fastp.html [2024-12-20 09:32:23,296] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: fastp.html [2024-12-20 09:32:23,418] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:23,429] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:23,430] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:23,430] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:23,453] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:23,453] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:23,453] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:23,453] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:23,453] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:23,453] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:23,454] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:23,571] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:23,581] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:23,582] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:23,582] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:23,605] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:23,605] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:23,605] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:23,605] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:23,605] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:23,605] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:23,605] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:23,713] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:23,723] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:23,725] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:23,725] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:23,749] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:23,749] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:23,749] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:23,749] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:23,750] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:23,750] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:23,750] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:23,853] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: fastp.html [2024-12-20 09:32:23,855] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: fastp.html [2024-12-20 09:32:23,856] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: fastp.html [2024-12-20 09:32:23,856] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: fastp.html [2024-12-20 09:32:23,860] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: fastp.html [2024-12-20 09:32:23,860] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: fastp.html [2024-12-20 09:32:23,982] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:23,991] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:23,993] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:23,993] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:24,018] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:24,018] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:24,018] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:24,018] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:24,018] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:24,018] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:24,018] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:24,175] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:24,210] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:24,213] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:24,213] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:24,238] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:24,238] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:24,239] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:24,239] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:24,239] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:24,239] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:24,239] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:24,359] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: fastp.html [2024-12-20 09:32:24,361] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: fastp.html [2024-12-20 09:32:24,362] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: fastp.html [2024-12-20 09:32:24,362] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: fastp.html [2024-12-20 09:32:24,366] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: fastp.html [2024-12-20 09:32:24,366] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: fastp.html [2024-12-20 09:32:24,495] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:24,504] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:24,506] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:24,507] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:24,537] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:24,537] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:24,538] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:24,538] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:24,538] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:24,538] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:24,538] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:24,644] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: fastp.html [2024-12-20 09:32:24,647] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: fastp.html [2024-12-20 09:32:24,647] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: fastp.html [2024-12-20 09:32:24,647] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: fastp.html [2024-12-20 09:32:24,653] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: fastp.html [2024-12-20 09:32:24,653] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: fastp.html [2024-12-20 09:32:24,767] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: fastp.html [2024-12-20 09:32:24,769] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: fastp.html [2024-12-20 09:32:24,769] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: fastp.html [2024-12-20 09:32:24,769] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: fastp.html [2024-12-20 09:32:24,773] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: fastp.html [2024-12-20 09:32:24,773] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: fastp.html [2024-12-20 09:32:24,946] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:24,956] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:24,962] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:24,962] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:24,984] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:24,984] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:24,984] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:24,984] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:24,984] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:24,984] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:24,984] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:25,097] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:25,107] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:25,110] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:25,110] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:25,131] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:25,131] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:25,132] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:25,132] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:25,132] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:25,132] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:25,132] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:25,480] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: fastp.html [2024-12-20 09:32:25,483] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: fastp.html [2024-12-20 09:32:25,483] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: fastp.html [2024-12-20 09:32:25,483] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: fastp.html [2024-12-20 09:32:25,487] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: fastp.html [2024-12-20 09:32:25,487] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: fastp.html [2024-12-20 09:32:25,618] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:25,630] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:25,632] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:25,632] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:25,663] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:25,664] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:25,664] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:25,664] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:25,664] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:25,664] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:25,664] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:25,816] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:25,861] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:25,867] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:25,868] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:25,928] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:25,929] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:25,929] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:25,929] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:25,929] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:25,929] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:25,929] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:26,143] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:26,152] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:26,154] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:26,154] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:26,176] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:26,176] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:26,176] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:26,176] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:26,176] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:26,176] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:26,176] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:26,292] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:26,307] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:26,310] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:26,311] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:26,332] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:26,332] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:26,332] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:26,332] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:26,332] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:26,332] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:26,332] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:26,439] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:26,449] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:26,451] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:26,451] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:26,473] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:26,473] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:26,473] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:26,473] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:26,473] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:26,473] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:26,474] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:26,586] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:26,595] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:26,597] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:26,597] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:26,619] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:26,648] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:26,648] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:26,648] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:26,648] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:26,648] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:26,648] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:26,830] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:26,854] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:26,856] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:26,856] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:26,879] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:26,879] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:26,879] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:26,879] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:26,879] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:26,879] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:26,879] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:26,993] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:27,001] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:27,003] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:27,003] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:27,024] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:27,024] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:27,024] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:27,024] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:27,024] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:27,024] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:27,024] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:27,118] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: fastp.html [2024-12-20 09:32:27,121] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: fastp.html [2024-12-20 09:32:27,121] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: fastp.html [2024-12-20 09:32:27,121] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: fastp.html [2024-12-20 09:32:27,125] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: fastp.html [2024-12-20 09:32:27,125] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: fastp.html [2024-12-20 09:32:27,237] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: fastp.html [2024-12-20 09:32:27,239] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: fastp.html [2024-12-20 09:32:27,239] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: fastp.html [2024-12-20 09:32:27,239] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: fastp.html [2024-12-20 09:32:27,242] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: fastp.html [2024-12-20 09:32:27,242] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: fastp.html [2024-12-20 09:32:27,360] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: fastp.html [2024-12-20 09:32:27,362] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: fastp.html [2024-12-20 09:32:27,362] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: fastp.html [2024-12-20 09:32:27,363] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: fastp.html [2024-12-20 09:32:27,367] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: fastp.html [2024-12-20 09:32:27,367] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: fastp.html [2024-12-20 09:32:27,507] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:27,517] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:27,519] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:27,519] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:27,541] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:27,541] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:27,541] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:27,541] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:27,541] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:27,541] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:27,541] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:27,643] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: fastp.html [2024-12-20 09:32:27,645] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: fastp.html [2024-12-20 09:32:27,645] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: fastp.html [2024-12-20 09:32:27,645] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: fastp.html [2024-12-20 09:32:27,648] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: fastp.html [2024-12-20 09:32:27,648] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: fastp.html [2024-12-20 09:32:27,782] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:27,825] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:27,829] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:27,830] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:27,852] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:27,852] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:27,852] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:27,852] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:27,852] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:27,852] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:27,852] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:27,963] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:27,974] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:27,975] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:27,976] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:28,000] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:28,000] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:28,000] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:28,000] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:28,000] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:28,000] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:28,000] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:28,101] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: fastp.html [2024-12-20 09:32:28,103] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: fastp.html [2024-12-20 09:32:28,104] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: fastp.html [2024-12-20 09:32:28,104] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: fastp.html [2024-12-20 09:32:28,108] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: fastp.html [2024-12-20 09:32:28,108] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: fastp.html [2024-12-20 09:32:28,227] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: fastp.html [2024-12-20 09:32:28,232] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: fastp.html [2024-12-20 09:32:28,232] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: fastp.html [2024-12-20 09:32:28,232] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: fastp.html [2024-12-20 09:32:28,235] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: fastp.html [2024-12-20 09:32:28,235] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: fastp.html [2024-12-20 09:32:28,410] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:28,459] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:28,465] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:28,465] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:28,498] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:28,498] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:28,498] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:28,498] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:28,498] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:28,498] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:28,498] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:28,590] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: fastp.html [2024-12-20 09:32:28,592] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: fastp.html [2024-12-20 09:32:28,592] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: fastp.html [2024-12-20 09:32:28,592] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: fastp.html [2024-12-20 09:32:28,600] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: fastp.html [2024-12-20 09:32:28,600] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: fastp.html [2024-12-20 09:32:28,794] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:28,804] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:28,806] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:28,806] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:28,828] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:28,828] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:28,828] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:28,828] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:28,828] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:28,828] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:28,828] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:28,949] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:28,958] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:28,959] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:28,959] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:28,982] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:28,982] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:28,982] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:28,982] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:28,982] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:28,982] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:28,982] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:29,092] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:29,139] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:29,146] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:29,146] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:29,237] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:29,237] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:29,237] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:29,237] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:29,237] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:29,237] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:29,237] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:29,381] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:29,419] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:29,424] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:29,424] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:29,479] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:29,480] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:29,480] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:29,480] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:29,480] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:29,480] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:29,480] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:29,572] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: fastp.html [2024-12-20 09:32:29,574] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: fastp.html [2024-12-20 09:32:29,574] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: fastp.html [2024-12-20 09:32:29,575] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: fastp.html [2024-12-20 09:32:29,578] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: fastp.html [2024-12-20 09:32:29,578] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: fastp.html [2024-12-20 09:32:29,688] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: fastp.html [2024-12-20 09:32:29,690] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: fastp.html [2024-12-20 09:32:29,691] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: fastp.html [2024-12-20 09:32:29,691] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: fastp.html [2024-12-20 09:32:29,694] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: fastp.html [2024-12-20 09:32:29,694] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: fastp.html [2024-12-20 09:32:29,814] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: fastp.html [2024-12-20 09:32:29,816] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: fastp.html [2024-12-20 09:32:29,816] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: fastp.html [2024-12-20 09:32:29,816] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: fastp.html [2024-12-20 09:32:29,819] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: fastp.html [2024-12-20 09:32:29,819] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: fastp.html [2024-12-20 09:32:29,944] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: fastp.html [2024-12-20 09:32:29,948] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: fastp.html [2024-12-20 09:32:29,948] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: fastp.html [2024-12-20 09:32:29,948] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: fastp.html [2024-12-20 09:32:29,953] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: fastp.html [2024-12-20 09:32:29,953] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: fastp.html [2024-12-20 09:32:30,100] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:30,110] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:30,120] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:30,120] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:30,143] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:30,143] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:30,144] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:30,144] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:30,144] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:30,144] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:30,144] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:30,270] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:30,280] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:30,282] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:30,282] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:30,305] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:30,305] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:30,305] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:30,305] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:30,305] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:30,305] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:30,305] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:30,417] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:30,430] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:30,432] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:30,432] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:30,455] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:30,455] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:30,455] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:30,455] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:30,455] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:30,455] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:30,456] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:30,585] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:30,630] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:30,635] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:30,635] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:30,724] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:30,724] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:30,725] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:30,725] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:30,725] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:30,725] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:30,725] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:30,847] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:30,859] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:30,861] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:30,861] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:30,887] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:30,887] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:30,887] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:30,887] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:30,887] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:30,887] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:30,887] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:30,996] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:31,006] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:31,008] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:31,008] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:31,029] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:31,030] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:31,030] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:31,030] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:31,030] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:31,030] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:31,030] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:31,194] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:31,203] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:31,206] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:31,206] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:31,230] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:31,230] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:31,230] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:31,230] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:31,230] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:31,230] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:31,230] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:31,341] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:31,351] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:31,354] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:31,354] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:31,448] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:31,448] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:31,448] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:31,448] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:31,448] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:31,448] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:31,448] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:31,660] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:31,669] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:31,671] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:31,671] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:31,694] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:31,695] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:31,695] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:31,695] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:31,695] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:31,695] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:31,695] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:31,800] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:31,810] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:31,812] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:31,812] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:31,836] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:31,836] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:31,836] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:31,836] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:31,836] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:31,836] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:31,836] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:32,008] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:32,018] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:32,020] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:32,020] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:32,044] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:32,044] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:32,045] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:32,045] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:32,045] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:32,045] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:32,045] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: fastqc_report.html [2024-12-20 09:32:32,141] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Summarize_Jobs.sh [2024-12-20 09:32:32,142] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Summarize_Jobs.sh [2024-12-20 09:32:32,143] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Summarize_Jobs.sh [2024-12-20 09:32:32,143] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Summarize_Jobs.sh [2024-12-20 09:32:32,146] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Summarize_Jobs.sh [2024-12-20 09:32:32,157] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: CollectMetrics.qsub [2024-12-20 09:32:32,159] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: CollectMetrics.qsub [2024-12-20 09:32:32,162] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: CollectMetrics.qsub [2024-12-20 09:32:32,173] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Parameter_Descriptions.txt [2024-12-20 09:32:32,175] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Parameter_Descriptions.txt [2024-12-20 09:32:32,179] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Parameter_Descriptions.txt [2024-12-20 09:32:32,188] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Run_Jobs.sh [2024-12-20 09:32:32,191] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Run_Jobs.sh [2024-12-20 09:32:32,216] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_06_G240_RNASEQ_G240_M34.o1630984 [2024-12-20 09:32:32,218] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_06_G240_RNASEQ_G240_M34.o1630984 [2024-12-20 09:32:32,218] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_06_G240_RNASEQ_G240_M34.o1630984 [2024-12-20 09:32:32,218] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_06_G240_RNASEQ_G240_M34.o1630984 [2024-12-20 09:32:32,222] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_06_G240_RNASEQ_G240_M34.o1630984 [2024-12-20 09:32:32,258] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_06_G240_RNASEQ_G240_M24.o1630974 [2024-12-20 09:32:32,260] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_06_G240_RNASEQ_G240_M24.o1630974 [2024-12-20 09:32:32,260] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_06_G240_RNASEQ_G240_M24.o1630974 [2024-12-20 09:32:32,260] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_06_G240_RNASEQ_G240_M24.o1630974 [2024-12-20 09:32:32,264] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_06_G240_RNASEQ_G240_M24.o1630974 [2024-12-20 09:32:32,299] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_06_G240_RNASEQ_G240_M36.o1630986 [2024-12-20 09:32:32,302] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_06_G240_RNASEQ_G240_M36.o1630986 [2024-12-20 09:32:32,302] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_06_G240_RNASEQ_G240_M36.o1630986 [2024-12-20 09:32:32,302] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_06_G240_RNASEQ_G240_M36.o1630986 [2024-12-20 09:32:32,307] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_06_G240_RNASEQ_G240_M36.o1630986 [2024-12-20 09:32:32,338] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_06_G240_RNASEQ_G240_M04.o1630954 [2024-12-20 09:32:32,340] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_06_G240_RNASEQ_G240_M04.o1630954 [2024-12-20 09:32:32,340] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_06_G240_RNASEQ_G240_M04.o1630954 [2024-12-20 09:32:32,340] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_06_G240_RNASEQ_G240_M04.o1630954 [2024-12-20 09:32:32,344] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_06_G240_RNASEQ_G240_M04.o1630954 [2024-12-20 09:32:32,380] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_06_G240_RNASEQ_G240_M19.o1630969 [2024-12-20 09:32:32,381] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_06_G240_RNASEQ_G240_M19.o1630969 [2024-12-20 09:32:32,382] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_06_G240_RNASEQ_G240_M19.o1630969 [2024-12-20 09:32:32,382] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_06_G240_RNASEQ_G240_M19.o1630969 [2024-12-20 09:32:32,385] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_06_G240_RNASEQ_G240_M19.o1630969 [2024-12-20 09:32:32,413] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_06_G240_RNASEQ_G240_M26.o1630976 [2024-12-20 09:32:32,415] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_06_G240_RNASEQ_G240_M26.o1630976 [2024-12-20 09:32:32,415] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_06_G240_RNASEQ_G240_M26.o1630976 [2024-12-20 09:32:32,415] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_06_G240_RNASEQ_G240_M26.o1630976 [2024-12-20 09:32:32,418] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_06_G240_RNASEQ_G240_M26.o1630976 [2024-12-20 09:32:32,447] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_06_G240_RNASEQ_G240_M11.o1630961 [2024-12-20 09:32:32,449] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_06_G240_RNASEQ_G240_M11.o1630961 [2024-12-20 09:32:32,449] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_06_G240_RNASEQ_G240_M11.o1630961 [2024-12-20 09:32:32,449] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_06_G240_RNASEQ_G240_M11.o1630961 [2024-12-20 09:32:32,453] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_06_G240_RNASEQ_G240_M11.o1630961 [2024-12-20 09:32:32,478] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_06_G240_RNASEQ_G240_M22.o1630972 [2024-12-20 09:32:32,480] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_06_G240_RNASEQ_G240_M22.o1630972 [2024-12-20 09:32:32,480] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_06_G240_RNASEQ_G240_M22.o1630972 [2024-12-20 09:32:32,480] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_06_G240_RNASEQ_G240_M22.o1630972 [2024-12-20 09:32:32,484] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_06_G240_RNASEQ_G240_M22.o1630972 [2024-12-20 09:32:32,512] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_06_G240_RNASEQ_G240_M32.o1630982 [2024-12-20 09:32:32,514] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_06_G240_RNASEQ_G240_M32.o1630982 [2024-12-20 09:32:32,514] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_06_G240_RNASEQ_G240_M32.o1630982 [2024-12-20 09:32:32,514] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_06_G240_RNASEQ_G240_M32.o1630982 [2024-12-20 09:32:32,518] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_06_G240_RNASEQ_G240_M32.o1630982 [2024-12-20 09:32:32,548] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_06_G240_RNASEQ_G240_M05.o1630955 [2024-12-20 09:32:32,549] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_06_G240_RNASEQ_G240_M05.o1630955 [2024-12-20 09:32:32,550] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_06_G240_RNASEQ_G240_M05.o1630955 [2024-12-20 09:32:32,550] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_06_G240_RNASEQ_G240_M05.o1630955 [2024-12-20 09:32:32,554] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_06_G240_RNASEQ_G240_M05.o1630955 [2024-12-20 09:32:32,587] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_06_G240_RNASEQ_G240_M33.o1630983 [2024-12-20 09:32:32,590] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_06_G240_RNASEQ_G240_M33.o1630983 [2024-12-20 09:32:32,591] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_06_G240_RNASEQ_G240_M33.o1630983 [2024-12-20 09:32:32,591] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_06_G240_RNASEQ_G240_M33.o1630983 [2024-12-20 09:32:32,597] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_06_G240_RNASEQ_G240_M33.o1630983 [2024-12-20 09:32:32,636] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_06_G240_RNASEQ_G240_M27.o1630977 [2024-12-20 09:32:32,639] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_06_G240_RNASEQ_G240_M27.o1630977 [2024-12-20 09:32:32,640] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_06_G240_RNASEQ_G240_M27.o1630977 [2024-12-20 09:32:32,640] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_06_G240_RNASEQ_G240_M27.o1630977 [2024-12-20 09:32:32,645] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_06_G240_RNASEQ_G240_M27.o1630977 [2024-12-20 09:32:32,679] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_06_G240_RNASEQ_G240_M31.o1630981 [2024-12-20 09:32:32,681] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_06_G240_RNASEQ_G240_M31.o1630981 [2024-12-20 09:32:32,681] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_06_G240_RNASEQ_G240_M31.o1630981 [2024-12-20 09:32:32,681] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_06_G240_RNASEQ_G240_M31.o1630981 [2024-12-20 09:32:32,684] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_06_G240_RNASEQ_G240_M31.o1630981 [2024-12-20 09:32:32,713] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_06_G240_RNASEQ_G240_M07.o1630957 [2024-12-20 09:32:32,716] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_06_G240_RNASEQ_G240_M07.o1630957 [2024-12-20 09:32:32,716] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_06_G240_RNASEQ_G240_M07.o1630957 [2024-12-20 09:32:32,716] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_06_G240_RNASEQ_G240_M07.o1630957 [2024-12-20 09:32:32,720] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_06_G240_RNASEQ_G240_M07.o1630957 [2024-12-20 09:32:32,745] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_06_G240_RNASEQ_G240_M03.o1630953 [2024-12-20 09:32:32,748] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_06_G240_RNASEQ_G240_M03.o1630953 [2024-12-20 09:32:32,748] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_06_G240_RNASEQ_G240_M03.o1630953 [2024-12-20 09:32:32,748] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_06_G240_RNASEQ_G240_M03.o1630953 [2024-12-20 09:32:32,752] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_06_G240_RNASEQ_G240_M03.o1630953 [2024-12-20 09:32:32,780] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_06_G240_RNASEQ_G240_M09.o1630959 [2024-12-20 09:32:32,782] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_06_G240_RNASEQ_G240_M09.o1630959 [2024-12-20 09:32:32,782] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_06_G240_RNASEQ_G240_M09.o1630959 [2024-12-20 09:32:32,782] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_06_G240_RNASEQ_G240_M09.o1630959 [2024-12-20 09:32:32,787] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_06_G240_RNASEQ_G240_M09.o1630959 [2024-12-20 09:32:32,827] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_06_G240_RNASEQ_G240_M28.o1630978 [2024-12-20 09:32:32,829] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_06_G240_RNASEQ_G240_M28.o1630978 [2024-12-20 09:32:32,830] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_06_G240_RNASEQ_G240_M28.o1630978 [2024-12-20 09:32:32,830] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_06_G240_RNASEQ_G240_M28.o1630978 [2024-12-20 09:32:32,834] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_06_G240_RNASEQ_G240_M28.o1630978 [2024-12-20 09:32:32,851] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_06_G240_RNASEQ_G240_M25.o1630975 [2024-12-20 09:32:32,853] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_06_G240_RNASEQ_G240_M25.o1630975 [2024-12-20 09:32:32,853] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_06_G240_RNASEQ_G240_M25.o1630975 [2024-12-20 09:32:32,853] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_06_G240_RNASEQ_G240_M25.o1630975 [2024-12-20 09:32:32,857] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_06_G240_RNASEQ_G240_M25.o1630975 [2024-12-20 09:32:32,892] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_06_G240_RNASEQ_G240_M06.o1630956 [2024-12-20 09:32:32,895] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_06_G240_RNASEQ_G240_M06.o1630956 [2024-12-20 09:32:32,895] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_06_G240_RNASEQ_G240_M06.o1630956 [2024-12-20 09:32:32,895] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_06_G240_RNASEQ_G240_M06.o1630956 [2024-12-20 09:32:32,901] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_06_G240_RNASEQ_G240_M06.o1630956 [2024-12-20 09:32:32,939] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_06_G240_RNASEQ_G240_M38.o1630988 [2024-12-20 09:32:32,942] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_06_G240_RNASEQ_G240_M38.o1630988 [2024-12-20 09:32:32,942] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_06_G240_RNASEQ_G240_M38.o1630988 [2024-12-20 09:32:32,942] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_06_G240_RNASEQ_G240_M38.o1630988 [2024-12-20 09:32:32,948] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_06_G240_RNASEQ_G240_M38.o1630988 [2024-12-20 09:32:32,981] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_06_G240_RNASEQ_G240_M39.o1630989 [2024-12-20 09:32:32,983] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_06_G240_RNASEQ_G240_M39.o1630989 [2024-12-20 09:32:32,983] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_06_G240_RNASEQ_G240_M39.o1630989 [2024-12-20 09:32:32,983] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_06_G240_RNASEQ_G240_M39.o1630989 [2024-12-20 09:32:32,987] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_06_G240_RNASEQ_G240_M39.o1630989 [2024-12-20 09:32:33,019] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_06_G240_RNASEQ_G240_M20.o1630970 [2024-12-20 09:32:33,021] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_06_G240_RNASEQ_G240_M20.o1630970 [2024-12-20 09:32:33,021] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_06_G240_RNASEQ_G240_M20.o1630970 [2024-12-20 09:32:33,021] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_06_G240_RNASEQ_G240_M20.o1630970 [2024-12-20 09:32:33,025] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_06_G240_RNASEQ_G240_M20.o1630970 [2024-12-20 09:32:33,053] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_06_G240_RNASEQ_G240_M10.o1630960 [2024-12-20 09:32:33,055] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_06_G240_RNASEQ_G240_M10.o1630960 [2024-12-20 09:32:33,055] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_06_G240_RNASEQ_G240_M10.o1630960 [2024-12-20 09:32:33,055] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_06_G240_RNASEQ_G240_M10.o1630960 [2024-12-20 09:32:33,059] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_06_G240_RNASEQ_G240_M10.o1630960 [2024-12-20 09:32:33,086] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_06_G240_RNASEQ_G240_M21.o1630971 [2024-12-20 09:32:33,088] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_06_G240_RNASEQ_G240_M21.o1630971 [2024-12-20 09:32:33,088] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_06_G240_RNASEQ_G240_M21.o1630971 [2024-12-20 09:32:33,088] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_06_G240_RNASEQ_G240_M21.o1630971 [2024-12-20 09:32:33,094] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_06_G240_RNASEQ_G240_M21.o1630971 [2024-12-20 09:32:33,124] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_06_G240_RNASEQ_G240_M29.o1630979 [2024-12-20 09:32:33,126] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_06_G240_RNASEQ_G240_M29.o1630979 [2024-12-20 09:32:33,127] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_06_G240_RNASEQ_G240_M29.o1630979 [2024-12-20 09:32:33,127] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_06_G240_RNASEQ_G240_M29.o1630979 [2024-12-20 09:32:33,131] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_06_G240_RNASEQ_G240_M29.o1630979 [2024-12-20 09:32:33,158] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_06_G240_RNASEQ_G240_M12.o1630962 [2024-12-20 09:32:33,160] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_06_G240_RNASEQ_G240_M12.o1630962 [2024-12-20 09:32:33,160] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_06_G240_RNASEQ_G240_M12.o1630962 [2024-12-20 09:32:33,160] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_06_G240_RNASEQ_G240_M12.o1630962 [2024-12-20 09:32:33,204] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_06_G240_RNASEQ_G240_M12.o1630962 [2024-12-20 09:32:33,329] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_06_G240_RNASEQ_G240_M35.o1630985 [2024-12-20 09:32:33,332] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_06_G240_RNASEQ_G240_M35.o1630985 [2024-12-20 09:32:33,332] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_06_G240_RNASEQ_G240_M35.o1630985 [2024-12-20 09:32:33,332] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_06_G240_RNASEQ_G240_M35.o1630985 [2024-12-20 09:32:33,336] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_06_G240_RNASEQ_G240_M35.o1630985 [2024-12-20 09:32:33,363] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_06_G240_RNASEQ_G240_M08.o1630958 [2024-12-20 09:32:33,365] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_06_G240_RNASEQ_G240_M08.o1630958 [2024-12-20 09:32:33,365] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_06_G240_RNASEQ_G240_M08.o1630958 [2024-12-20 09:32:33,365] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_06_G240_RNASEQ_G240_M08.o1630958 [2024-12-20 09:32:33,368] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_06_G240_RNASEQ_G240_M08.o1630958 [2024-12-20 09:32:33,394] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_06_G240_RNASEQ_G240_M02.o1630952 [2024-12-20 09:32:33,396] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_06_G240_RNASEQ_G240_M02.o1630952 [2024-12-20 09:32:33,396] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_06_G240_RNASEQ_G240_M02.o1630952 [2024-12-20 09:32:33,397] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_06_G240_RNASEQ_G240_M02.o1630952 [2024-12-20 09:32:33,400] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_06_G240_RNASEQ_G240_M02.o1630952 [2024-12-20 09:32:33,429] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_06_G240_RNASEQ_G240_M23.o1630973 [2024-12-20 09:32:33,430] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_06_G240_RNASEQ_G240_M23.o1630973 [2024-12-20 09:32:33,431] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_06_G240_RNASEQ_G240_M23.o1630973 [2024-12-20 09:32:33,431] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_06_G240_RNASEQ_G240_M23.o1630973 [2024-12-20 09:32:33,434] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_06_G240_RNASEQ_G240_M23.o1630973 [2024-12-20 09:32:33,459] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_06_G240_RNASEQ_G240_M37.o1630987 [2024-12-20 09:32:33,460] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_06_G240_RNASEQ_G240_M37.o1630987 [2024-12-20 09:32:33,461] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_06_G240_RNASEQ_G240_M37.o1630987 [2024-12-20 09:32:33,461] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_06_G240_RNASEQ_G240_M37.o1630987 [2024-12-20 09:32:33,464] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_06_G240_RNASEQ_G240_M37.o1630987 [2024-12-20 09:32:33,563] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_06_G240_RNASEQ_G240_M14.o1630964 [2024-12-20 09:32:33,583] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_06_G240_RNASEQ_G240_M14.o1630964 [2024-12-20 09:32:33,584] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_06_G240_RNASEQ_G240_M14.o1630964 [2024-12-20 09:32:33,584] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_06_G240_RNASEQ_G240_M14.o1630964 [2024-12-20 09:32:33,590] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_06_G240_RNASEQ_G240_M14.o1630964 [2024-12-20 09:32:33,634] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_06_G240_RNASEQ_G240_M17.o1630967 [2024-12-20 09:32:33,636] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_06_G240_RNASEQ_G240_M17.o1630967 [2024-12-20 09:32:33,636] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_06_G240_RNASEQ_G240_M17.o1630967 [2024-12-20 09:32:33,636] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_06_G240_RNASEQ_G240_M17.o1630967 [2024-12-20 09:32:33,640] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_06_G240_RNASEQ_G240_M17.o1630967 [2024-12-20 09:32:33,671] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_06_G240_RNASEQ_G240_M30.o1630980 [2024-12-20 09:32:33,674] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_06_G240_RNASEQ_G240_M30.o1630980 [2024-12-20 09:32:33,674] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_06_G240_RNASEQ_G240_M30.o1630980 [2024-12-20 09:32:33,674] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_06_G240_RNASEQ_G240_M30.o1630980 [2024-12-20 09:32:33,680] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_06_G240_RNASEQ_G240_M30.o1630980 [2024-12-20 09:32:33,716] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_06_G240_RNASEQ_G240_M13.o1630963 [2024-12-20 09:32:33,718] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_06_G240_RNASEQ_G240_M13.o1630963 [2024-12-20 09:32:33,718] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_06_G240_RNASEQ_G240_M13.o1630963 [2024-12-20 09:32:33,719] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_06_G240_RNASEQ_G240_M13.o1630963 [2024-12-20 09:32:33,723] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_06_G240_RNASEQ_G240_M13.o1630963 [2024-12-20 09:32:33,752] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_06_G240_RNASEQ_G240_M01.o1630951 [2024-12-20 09:32:33,754] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_06_G240_RNASEQ_G240_M01.o1630951 [2024-12-20 09:32:33,755] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_06_G240_RNASEQ_G240_M01.o1630951 [2024-12-20 09:32:33,755] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_06_G240_RNASEQ_G240_M01.o1630951 [2024-12-20 09:32:33,758] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_06_G240_RNASEQ_G240_M01.o1630951 [2024-12-20 09:32:33,795] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_06_G240_RNASEQ_G240_M18.o1630968 [2024-12-20 09:32:33,799] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_06_G240_RNASEQ_G240_M18.o1630968 [2024-12-20 09:32:33,799] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_06_G240_RNASEQ_G240_M18.o1630968 [2024-12-20 09:32:33,799] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_06_G240_RNASEQ_G240_M18.o1630968 [2024-12-20 09:32:33,805] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_06_G240_RNASEQ_G240_M18.o1630968 [2024-12-20 09:32:33,843] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_06_G240_RNASEQ_G240_M15.o1630965 [2024-12-20 09:32:33,845] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_06_G240_RNASEQ_G240_M15.o1630965 [2024-12-20 09:32:33,845] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_06_G240_RNASEQ_G240_M15.o1630965 [2024-12-20 09:32:33,845] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_06_G240_RNASEQ_G240_M15.o1630965 [2024-12-20 09:32:33,849] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_06_G240_RNASEQ_G240_M15.o1630965 [2024-12-20 09:32:33,940] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_06_G240_RNASEQ_G240_M16.o1630966 [2024-12-20 09:32:33,974] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_06_G240_RNASEQ_G240_M16.o1630966 [2024-12-20 09:32:33,977] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_06_G240_RNASEQ_G240_M16.o1630966 [2024-12-20 09:32:33,978] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_06_G240_RNASEQ_G240_M16.o1630966 [2024-12-20 09:32:34,038] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_06_G240_RNASEQ_G240_M16.o1630966 [2024-12-20 09:32:34,118] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: CollectInsertSizeMetrics_Stats.txt [2024-12-20 09:32:34,120] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: CollectInsertSizeMetrics_Stats.txt [2024-12-20 09:32:34,123] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: CollectInsertSizeMetrics_Stats.txt [2024-12-20 09:32:34,132] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: CollectRnaSeqMetrics_Stats.txt [2024-12-20 09:32:34,134] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: CollectRnaSeqMetrics_Stats.txt [2024-12-20 09:32:34,137] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: CollectRnaSeqMetrics_Stats.txt [2024-12-20 09:32:34,142] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: CollectInsertSizeMetrics_Plots.pdf [2024-12-20 09:32:34,165] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: genes_refFlat [2024-12-20 09:32:34,167] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: genes_refFlat [2024-12-20 09:32:34,167] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: genes_refFlat [2024-12-20 09:32:34,167] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: genes_refFlat [2024-12-20 09:32:34,171] multiqc [DEBUG ] File ignored by vep/vep_html because it exceeded search pattern filesize limit: genes_refFlat [2024-12-20 09:32:34,171] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: genes_refFlat [2024-12-20 09:32:34,171] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: genes_refFlat [2024-12-20 09:32:34,171] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: genes_refFlat [2024-12-20 09:32:34,171] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: genes_refFlat [2024-12-20 09:32:34,171] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: genes_refFlat [2024-12-20 09:32:34,171] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: genes_refFlat [2024-12-20 09:32:34,171] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: genes_refFlat [2024-12-20 09:32:34,171] multiqc [DEBUG ] File ignored by snpeff because it exceeded search pattern filesize limit: genes_refFlat [2024-12-20 09:32:34,171] multiqc [DEBUG ] File ignored by stacks/sumstats because it exceeded search pattern filesize limit: genes_refFlat [2024-12-20 09:32:34,986] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: rRNA_intervalList_sorted.TOPHAT [2024-12-20 09:32:34,988] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: rRNA_intervalList_sorted.TOPHAT [2024-12-20 09:32:34,988] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: rRNA_intervalList_sorted.TOPHAT [2024-12-20 09:32:34,988] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: rRNA_intervalList_sorted.TOPHAT [2024-12-20 09:32:34,992] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: rRNA_intervalList_sorted.TOPHAT [2024-12-20 09:32:35,037] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: rRNA_intervalList_sorted.STAR [2024-12-20 09:32:35,039] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: rRNA_intervalList_sorted.STAR [2024-12-20 09:32:35,039] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: rRNA_intervalList_sorted.STAR [2024-12-20 09:32:35,040] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: rRNA_intervalList_sorted.STAR [2024-12-20 09:32:35,043] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: rRNA_intervalList_sorted.STAR [2024-12-20 09:32:38,108] multiqc.plots.bargraph [DEBUG ] Using matplotlib version 3.4.3 [2024-12-20 09:32:38,120] multiqc.plots.linegraph [DEBUG ] Using matplotlib version 3.4.3 [2024-12-20 09:32:38,124] multiqc [DEBUG ] No samples found: custom_content [2024-12-20 09:32:38,134] multiqc [DEBUG ] No samples found: ccs [2024-12-20 09:32:38,164] multiqc [DEBUG ] No samples found: ngsderive [2024-12-20 09:32:38,174] multiqc [DEBUG ] No samples found: purple [2024-12-20 09:32:38,181] multiqc [DEBUG ] No samples found: conpair [2024-12-20 09:32:38,218] multiqc [DEBUG ] No samples found: lima [2024-12-20 09:32:38,244] multiqc [DEBUG ] No samples found: peddy [2024-12-20 09:32:38,253] multiqc [DEBUG ] No samples found: somalier [2024-12-20 09:32:38,273] multiqc [DEBUG ] No samples found: methylQA [2024-12-20 09:32:38,302] multiqc.modules.mosdepth.mosdepth [DEBUG ] include_contigs: [] [2024-12-20 09:32:38,302] multiqc.modules.mosdepth.mosdepth [DEBUG ] exclude_contigs: [] [2024-12-20 09:32:38,302] multiqc [DEBUG ] No samples found: mosdepth [2024-12-20 09:32:38,310] multiqc [DEBUG ] No samples found: phantompeakqualtools [2024-12-20 09:32:38,336] multiqc [DEBUG ] No samples found: qualimap [2024-12-20 09:32:38,364] multiqc [DEBUG ] No samples found: preseq [2024-12-20 09:32:38,388] multiqc [DEBUG ] No samples found: quast [2024-12-20 09:32:38,419] multiqc [DEBUG ] No samples found: qorts [2024-12-20 09:32:38,442] multiqc [DEBUG ] No samples found: rna_seqc [2024-12-20 09:32:38,465] multiqc [DEBUG ] No samples found: rockhopper [2024-12-20 09:32:38,489] multiqc [DEBUG ] No samples found: rsem [2024-12-20 09:32:38,581] multiqc.modules.rseqc.rseqc [INFO ] Found 39 infer_experiment reports [2024-12-20 09:32:38,614] multiqc [DEBUG ] No samples found: busco [2024-12-20 09:32:38,623] multiqc [DEBUG ] No samples found: bustools [2024-12-20 09:32:38,644] multiqc [DEBUG ] No samples found: goleft_indexcov [2024-12-20 09:32:38,665] multiqc [DEBUG ] No samples found: gffcompare [2024-12-20 09:32:38,673] multiqc [DEBUG ] No samples found: disambiguate [2024-12-20 09:32:38,700] multiqc [DEBUG ] No samples found: supernova [2024-12-20 09:32:38,764] multiqc [DEBUG ] No samples found: deeptools [2024-12-20 09:32:38,783] multiqc [DEBUG ] No samples found: sargasso [2024-12-20 09:32:38,809] multiqc [DEBUG ] No samples found: verifybamid [2024-12-20 09:32:38,836] multiqc [DEBUG ] No samples found: mirtrace [2024-12-20 09:32:38,866] multiqc [DEBUG ] No samples found: happy [2024-12-20 09:32:38,898] multiqc [DEBUG ] No samples found: mirtop [2024-12-20 09:32:38,943] multiqc [DEBUG ] No samples found: sambamba [2024-12-20 09:32:38,955] multiqc [DEBUG ] No samples found: homer [2024-12-20 09:32:38,975] multiqc [DEBUG ] No samples found: hops [2024-12-20 09:32:38,983] multiqc [DEBUG ] No samples found: macs2 [2024-12-20 09:32:38,990] multiqc [DEBUG ] No samples found: theta2 [2024-12-20 09:32:39,009] multiqc [DEBUG ] No samples found: snpeff [2024-12-20 09:32:39,050] multiqc [DEBUG ] No samples found: gatk [2024-12-20 09:32:39,056] multiqc [DEBUG ] No samples found: htseq [2024-12-20 09:32:39,062] multiqc [DEBUG ] No samples found: bcftools [2024-12-20 09:32:39,095] multiqc.modules.featureCounts.feature_counts [DEBUG ] Duplicate sample name found! Overwriting: G240_M35_sorted [2024-12-20 09:32:39,098] multiqc.modules.featureCounts.feature_counts [DEBUG ] Duplicate sample name found! Overwriting: G240_M32_sorted [2024-12-20 09:32:39,101] multiqc.modules.featureCounts.feature_counts [DEBUG ] Duplicate sample name found! Overwriting: G240_M23_sorted [2024-12-20 09:32:39,103] multiqc.modules.featureCounts.feature_counts [DEBUG ] Duplicate sample name found! Overwriting: G240_M19_sorted [2024-12-20 09:32:39,106] multiqc.modules.featureCounts.feature_counts [DEBUG ] Duplicate sample name found! Overwriting: G240_M20_sorted [2024-12-20 09:32:39,109] multiqc.modules.featureCounts.feature_counts [DEBUG ] Duplicate sample name found! Overwriting: G240_M07_sorted [2024-12-20 09:32:39,111] multiqc.modules.featureCounts.feature_counts [DEBUG ] Duplicate sample name found! Overwriting: G240_M04_sorted [2024-12-20 09:32:39,114] multiqc.modules.featureCounts.feature_counts [DEBUG ] Duplicate sample name found! Overwriting: G240_M39_sorted [2024-12-20 09:32:39,117] multiqc.modules.featureCounts.feature_counts [DEBUG ] Duplicate sample name found! Overwriting: G240_M36_sorted [2024-12-20 09:32:39,120] multiqc.modules.featureCounts.feature_counts [DEBUG ] Duplicate sample name found! Overwriting: G240_M27_sorted [2024-12-20 09:32:39,123] multiqc.modules.featureCounts.feature_counts [DEBUG ] Duplicate sample name found! Overwriting: G240_M24_sorted [2024-12-20 09:32:39,126] multiqc.modules.featureCounts.feature_counts [DEBUG ] Duplicate sample name found! Overwriting: G240_M21_sorted [2024-12-20 09:32:39,128] multiqc.modules.featureCounts.feature_counts [DEBUG ] Duplicate sample name found! Overwriting: G240_M12_sorted [2024-12-20 09:32:39,131] multiqc.modules.featureCounts.feature_counts [DEBUG ] Duplicate sample name found! Overwriting: G240_M08_sorted [2024-12-20 09:32:39,134] multiqc.modules.featureCounts.feature_counts [DEBUG ] Duplicate sample name found! Overwriting: G240_M05_sorted [2024-12-20 09:32:39,137] multiqc.modules.featureCounts.feature_counts [DEBUG ] Duplicate sample name found! Overwriting: G240_M37_sorted [2024-12-20 09:32:39,139] multiqc.modules.featureCounts.feature_counts [DEBUG ] Duplicate sample name found! Overwriting: G240_M28_sorted [2024-12-20 09:32:39,142] multiqc.modules.featureCounts.feature_counts [DEBUG ] Duplicate sample name found! Overwriting: G240_M25_sorted [2024-12-20 09:32:39,144] multiqc.modules.featureCounts.feature_counts [DEBUG ] Duplicate sample name found! Overwriting: G240_M16_sorted [2024-12-20 09:32:39,147] multiqc.modules.featureCounts.feature_counts [DEBUG ] Duplicate sample name found! Overwriting: G240_M22_sorted [2024-12-20 09:32:39,150] multiqc.modules.featureCounts.feature_counts [DEBUG ] Duplicate sample name found! Overwriting: G240_M13_sorted [2024-12-20 09:32:39,153] multiqc.modules.featureCounts.feature_counts [DEBUG ] Duplicate sample name found! Overwriting: G240_M09_sorted [2024-12-20 09:32:39,155] multiqc.modules.featureCounts.feature_counts [DEBUG ] Duplicate sample name found! Overwriting: G240_M10_sorted [2024-12-20 09:32:39,158] multiqc.modules.featureCounts.feature_counts [DEBUG ] Duplicate sample name found! Overwriting: G240_M01_sorted [2024-12-20 09:32:39,160] multiqc.modules.featureCounts.feature_counts [DEBUG ] Duplicate sample name found! Overwriting: G240_M33_sorted [2024-12-20 09:32:39,163] multiqc.modules.featureCounts.feature_counts [DEBUG ] Duplicate sample name found! Overwriting: G240_M29_sorted [2024-12-20 09:32:39,165] multiqc.modules.featureCounts.feature_counts [DEBUG ] Duplicate sample name found! Overwriting: G240_M30_sorted [2024-12-20 09:32:39,168] multiqc.modules.featureCounts.feature_counts [DEBUG ] Duplicate sample name found! Overwriting: G240_M26_sorted [2024-12-20 09:32:39,171] multiqc.modules.featureCounts.feature_counts [DEBUG ] Duplicate sample name found! Overwriting: G240_M17_sorted [2024-12-20 09:32:39,173] multiqc.modules.featureCounts.feature_counts [DEBUG ] Duplicate sample name found! Overwriting: G240_M14_sorted [2024-12-20 09:32:39,176] multiqc.modules.featureCounts.feature_counts [DEBUG ] Duplicate sample name found! Overwriting: G240_M11_sorted [2024-12-20 09:32:39,178] multiqc.modules.featureCounts.feature_counts [DEBUG ] Duplicate sample name found! Overwriting: G240_M02_sorted [2024-12-20 09:32:39,180] multiqc.modules.featureCounts.feature_counts [DEBUG ] Duplicate sample name found! Overwriting: G240_M34_sorted [2024-12-20 09:32:39,181] multiqc.modules.featureCounts.feature_counts [DEBUG ] Duplicate sample name found! Overwriting: G240_M31_sorted [2024-12-20 09:32:39,182] multiqc.modules.featureCounts.feature_counts [DEBUG ] Duplicate sample name found! Overwriting: G240_M18_sorted [2024-12-20 09:32:39,184] multiqc.modules.featureCounts.feature_counts [DEBUG ] Duplicate sample name found! Overwriting: G240_M15_sorted [2024-12-20 09:32:39,185] multiqc.modules.featureCounts.feature_counts [DEBUG ] Duplicate sample name found! Overwriting: G240_M06_sorted [2024-12-20 09:32:39,186] multiqc.modules.featureCounts.feature_counts [DEBUG ] Duplicate sample name found! Overwriting: G240_M03_sorted [2024-12-20 09:32:39,187] multiqc.modules.featureCounts.feature_counts [DEBUG ] Duplicate sample name found! Overwriting: G240_M38_sorted [2024-12-20 09:32:39,187] multiqc.modules.featureCounts.feature_counts [INFO ] Found 39 reports [2024-12-20 09:32:39,237] multiqc [DEBUG ] No samples found: fgbio [2024-12-20 09:32:39,340] multiqc [DEBUG ] No samples found: dragen [2024-12-20 09:32:39,365] multiqc [DEBUG ] No samples found: dedup [2024-12-20 09:32:39,385] multiqc [DEBUG ] No samples found: damageprofiler [2024-12-20 09:32:39,544] multiqc [DEBUG ] No samples found: biobambam2 [2024-12-20 09:32:39,561] multiqc [DEBUG ] No samples found: jcvi [2024-12-20 09:32:39,570] multiqc [DEBUG ] No samples found: mtnucratio [2024-12-20 09:32:41,586] multiqc.modules.picard.picard [INFO ] Found 39 InsertSizeMetrics reports [2024-12-20 09:32:41,644] multiqc.modules.picard.picard [INFO ] Found 39 MarkDuplicates reports [2024-12-20 09:32:41,725] multiqc.modules.picard.picard [INFO ] Found 39 RnaSeqMetrics reports [2024-12-20 09:32:41,746] multiqc [DEBUG ] No samples found: vep [2024-12-20 09:32:41,771] multiqc [DEBUG ] No samples found: sentieon [2024-12-20 09:32:41,780] multiqc [DEBUG ] No samples found: prokka [2024-12-20 09:32:41,815] multiqc [DEBUG ] No samples found: qc3C [2024-12-20 09:32:41,841] multiqc [DEBUG ] No samples found: nanostat [2024-12-20 09:32:41,851] multiqc [DEBUG ] No samples found: samblaster [2024-12-20 09:32:42,077] multiqc.modules.samtools.samtools [INFO ] Found 117 flagstat reports [2024-12-20 09:32:42,104] multiqc [DEBUG ] No samples found: sexdeterrmine [2024-12-20 09:32:42,110] multiqc [DEBUG ] No samples found: eigenstratdatabasetools [2024-12-20 09:32:42,117] multiqc [DEBUG ] No samples found: bamtools [2024-12-20 09:32:42,122] multiqc [DEBUG ] No samples found: jellyfish [2024-12-20 09:32:42,131] multiqc [DEBUG ] No samples found: vcftools [2024-12-20 09:32:42,136] multiqc [DEBUG ] No samples found: longranger [2024-12-20 09:32:42,161] multiqc [DEBUG ] No samples found: stacks [2024-12-20 09:32:42,167] multiqc [DEBUG ] No samples found: varscan2 [2024-12-20 09:32:42,187] multiqc [DEBUG ] No samples found: snippy [2024-12-20 09:32:42,242] multiqc [DEBUG ] No samples found: bbmap [2024-12-20 09:32:42,266] multiqc [DEBUG ] No samples found: bismark [2024-12-20 09:32:42,299] multiqc [DEBUG ] No samples found: biscuit [2024-12-20 09:32:42,310] multiqc [DEBUG ] No samples found: hicexplorer [2024-12-20 09:32:42,332] multiqc [DEBUG ] No samples found: hicup [2024-12-20 09:32:42,352] multiqc [DEBUG ] No samples found: hicpro [2024-12-20 09:32:42,400] multiqc [DEBUG ] No samples found: salmon [2024-12-20 09:32:42,411] multiqc [DEBUG ] No samples found: kallisto [2024-12-20 09:32:42,433] multiqc [DEBUG ] No samples found: slamdunk [2024-12-20 09:32:46,441] multiqc.modules.star.star [INFO ] Found 39 reports and 39 gene count files [2024-12-20 09:32:46,502] multiqc [DEBUG ] No samples found: hisat2 [2024-12-20 09:32:46,558] multiqc [DEBUG ] No samples found: tophat [2024-12-20 09:32:46,622] multiqc [DEBUG ] No samples found: bowtie2 [2024-12-20 09:32:46,651] multiqc [DEBUG ] No samples found: bowtie1 [2024-12-20 09:32:46,693] multiqc [DEBUG ] No samples found: snpsplit [2024-12-20 09:32:46,744] multiqc [DEBUG ] No samples found: odgi [2024-12-20 09:32:46,777] multiqc [DEBUG ] No samples found: pangolin [2024-12-20 09:32:46,810] multiqc [DEBUG ] No samples found: kat [2024-12-20 09:32:46,844] multiqc [DEBUG ] No samples found: leehom [2024-12-20 09:32:46,902] multiqc [DEBUG ] No samples found: adapterRemoval [2024-12-20 09:32:46,938] multiqc [DEBUG ] No samples found: clipandmerge [2024-12-20 09:32:46,990] multiqc [DEBUG ] No samples found: cutadapt [2024-12-20 09:32:47,025] multiqc [DEBUG ] No samples found: flexbar [2024-12-20 09:32:47,060] multiqc [DEBUG ] No samples found: kaiju [2024-12-20 09:32:47,094] multiqc [DEBUG ] No samples found: kraken [2024-12-20 09:32:47,129] multiqc [DEBUG ] No samples found: malt [2024-12-20 09:32:47,183] multiqc [DEBUG ] No samples found: trimmomatic [2024-12-20 09:32:47,193] multiqc [DEBUG ] No samples found: sickle [2024-12-20 09:32:47,220] multiqc [DEBUG ] No samples found: skewer [2024-12-20 09:32:47,229] multiqc [DEBUG ] No samples found: sortmerna [2024-12-20 09:32:47,236] multiqc [DEBUG ] No samples found: biobloomtools [2024-12-20 09:32:47,256] multiqc [DEBUG ] No samples found: fastq_screen [2024-12-20 09:32:47,274] multiqc [DEBUG ] No samples found: afterqc [2024-12-20 09:32:47,316] multiqc.modules.fastp.fastp [DEBUG ] No duplication rate plot data: fastp.json [2024-12-20 09:32:47,331] multiqc.modules.fastp.fastp [DEBUG ] No duplication rate plot data: fastp.json [2024-12-20 09:32:47,357] multiqc.modules.fastp.fastp [DEBUG ] No duplication rate plot data: fastp.json [2024-12-20 09:32:47,379] multiqc.modules.fastp.fastp [DEBUG ] No duplication rate plot data: fastp.json [2024-12-20 09:32:47,394] multiqc.modules.fastp.fastp [DEBUG ] No duplication rate plot data: fastp.json [2024-12-20 09:32:47,412] multiqc.modules.fastp.fastp [DEBUG ] No duplication rate plot data: fastp.json [2024-12-20 09:32:47,435] multiqc.modules.fastp.fastp [DEBUG ] No duplication rate plot data: fastp.json [2024-12-20 09:32:47,475] multiqc.modules.fastp.fastp [DEBUG ] No duplication rate plot data: fastp.json [2024-12-20 09:32:47,501] multiqc.modules.fastp.fastp [DEBUG ] No duplication rate plot data: fastp.json [2024-12-20 09:32:47,526] multiqc.modules.fastp.fastp [DEBUG ] No duplication rate plot data: fastp.json [2024-12-20 09:32:47,552] multiqc.modules.fastp.fastp [DEBUG ] No duplication rate plot data: fastp.json [2024-12-20 09:32:47,566] multiqc.modules.fastp.fastp [DEBUG ] No duplication rate plot data: fastp.json [2024-12-20 09:32:47,590] multiqc.modules.fastp.fastp [DEBUG ] No duplication rate plot data: fastp.json [2024-12-20 09:32:47,604] multiqc.modules.fastp.fastp [DEBUG ] No duplication rate plot data: fastp.json [2024-12-20 09:32:47,622] multiqc.modules.fastp.fastp [DEBUG ] No duplication rate plot data: fastp.json [2024-12-20 09:32:47,638] multiqc.modules.fastp.fastp [DEBUG ] No duplication rate plot data: fastp.json [2024-12-20 09:32:47,660] multiqc.modules.fastp.fastp [DEBUG ] No duplication rate plot data: fastp.json [2024-12-20 09:32:47,681] multiqc.modules.fastp.fastp [DEBUG ] No duplication rate plot data: fastp.json [2024-12-20 09:32:47,706] multiqc.modules.fastp.fastp [DEBUG ] No duplication rate plot data: fastp.json [2024-12-20 09:32:47,735] multiqc.modules.fastp.fastp [DEBUG ] No duplication rate plot data: fastp.json [2024-12-20 09:32:47,750] multiqc.modules.fastp.fastp [DEBUG ] No duplication rate plot data: fastp.json [2024-12-20 09:32:47,773] multiqc.modules.fastp.fastp [DEBUG ] No duplication rate plot data: fastp.json [2024-12-20 09:32:47,785] multiqc.modules.fastp.fastp [DEBUG ] No duplication rate plot data: fastp.json [2024-12-20 09:32:47,803] multiqc.modules.fastp.fastp [DEBUG ] No duplication rate plot data: fastp.json [2024-12-20 09:32:47,827] multiqc.modules.fastp.fastp [DEBUG ] No duplication rate plot data: fastp.json [2024-12-20 09:32:47,847] multiqc.modules.fastp.fastp [DEBUG ] No duplication rate plot data: fastp.json [2024-12-20 09:32:47,874] multiqc.modules.fastp.fastp [DEBUG ] No duplication rate plot data: fastp.json [2024-12-20 09:32:47,899] multiqc.modules.fastp.fastp [DEBUG ] No duplication rate plot data: fastp.json [2024-12-20 09:32:47,939] multiqc.modules.fastp.fastp [DEBUG ] No duplication rate plot data: fastp.json [2024-12-20 09:32:47,959] multiqc.modules.fastp.fastp [DEBUG ] No duplication rate plot data: fastp.json [2024-12-20 09:32:47,983] multiqc.modules.fastp.fastp [DEBUG ] No duplication rate plot data: fastp.json [2024-12-20 09:32:48,013] multiqc.modules.fastp.fastp [DEBUG ] No duplication rate plot data: fastp.json [2024-12-20 09:32:48,039] multiqc.modules.fastp.fastp [DEBUG ] No duplication rate plot data: fastp.json [2024-12-20 09:32:48,060] multiqc.modules.fastp.fastp [DEBUG ] No duplication rate plot data: fastp.json [2024-12-20 09:32:48,079] multiqc.modules.fastp.fastp [DEBUG ] No duplication rate plot data: fastp.json [2024-12-20 09:32:48,099] multiqc.modules.fastp.fastp [DEBUG ] No duplication rate plot data: fastp.json [2024-12-20 09:32:48,124] multiqc.modules.fastp.fastp [DEBUG ] No duplication rate plot data: fastp.json [2024-12-20 09:32:48,141] multiqc.modules.fastp.fastp [DEBUG ] No duplication rate plot data: fastp.json [2024-12-20 09:32:48,159] multiqc.modules.fastp.fastp [DEBUG ] No duplication rate plot data: fastp.json [2024-12-20 09:32:48,161] multiqc.modules.fastp.fastp [INFO ] Found 39 reports [2024-12-20 09:32:57,705] multiqc.modules.fastqc.fastqc [INFO ] Found 78 reports [2024-12-20 09:32:57,720] multiqc.modules.base_module [DEBUG ] Skipping section 'fastqc_sequence_counts' because specified in user config [2024-12-20 09:33:03,061] multiqc [DEBUG ] No samples found: pychopper [2024-12-20 09:33:03,077] multiqc [DEBUG ] No samples found: pycoqc [2024-12-20 09:33:03,086] multiqc [DEBUG ] No samples found: minionqc [2024-12-20 09:33:03,125] multiqc [DEBUG ] No samples found: multivcfanalyzer [2024-12-20 09:33:03,144] multiqc [DEBUG ] No samples found: clusterflow [2024-12-20 09:33:03,176] multiqc [DEBUG ] No samples found: bcl2fastq [2024-12-20 09:33:03,187] multiqc [DEBUG ] No samples found: bclconvert [2024-12-20 09:33:03,210] multiqc [DEBUG ] No samples found: interop [2024-12-20 09:33:03,235] multiqc [DEBUG ] No samples found: ivar [2024-12-20 09:33:03,271] multiqc [DEBUG ] No samples found: flash [2024-12-20 09:33:03,280] multiqc [DEBUG ] No samples found: seqyclean [2024-12-20 09:33:03,289] multiqc [DEBUG ] No samples found: optitype [2024-12-20 09:33:03,472] multiqc [INFO ] Compressing plot data [2024-12-20 09:33:07,340] multiqc [INFO ] Report : multiqc_report.html [2024-12-20 09:33:07,341] multiqc [INFO ] Data : multiqc_data [2024-12-20 09:33:07,341] multiqc [DEBUG ] Moving data file from '/scratch/tmp7fi3sqfb/multiqc_data' to '/projectnb/wax-dk/max/G240_RNASEQ/Scripts/99_final_summary/G240_RNASEQ_multiqc_report/multiqc_data' [2024-12-20 09:33:08,028] multiqc [INFO ] MultiQC complete [2024-12-20 09:33:08,028] multiqc [WARNING] 1 flat-image plot used in the report due to large sample numbers