Sample	total_passed	total_failed	secondary_passed	secondary_failed	supplementary_passed	supplementary_failed	duplicates_passed	duplicates_failed	mapped_passed	mapped_failed	mapped_passed_pct	mapped_failed_pct	paired in sequencing_passed	paired in sequencing_failed	read1_passed	read1_failed	read2_passed	read2_failed	properly paired_passed	properly paired_failed	properly paired_passed_pct	properly paired_failed_pct	with itself and mate mapped_passed	with itself and mate mapped_failed	singletons_passed	singletons_failed	singletons_passed_pct	singletons_failed_pct	with mate mapped to a different chr_passed	with mate mapped to a different chr_failed	with mate mapped to a different chr (mapQ >= 5)_passed	with mate mapped to a different chr (mapQ >= 5)_failed	flagstat_total
G247_M01_statistics_for_all_accepted_reads	29663400	0	2190298	0	0	0	0	0	29663400	0	100.0	nan	27473102	0	13736551	0	13736551	0	27473102	0	100.0	nan	27473102	0	0	0	0.0	nan	0	0	0	0	29663400
G247_M01_statistics_for_primary_reads	27473102	0	0	0	0	0	0	0	27473102	0	100.0	nan	27473102	0	13736551	0	13736551	0	27473102	0	100.0	nan	27473102	0	0	0	0.0	nan	0	0	0	0	27473102
G247_M01_statistics_for_primary_unique_reads	26085474	0	0	0	0	0	0	0	26085474	0	100.0	nan	26085474	0	13042737	0	13042737	0	26085474	0	100.0	nan	26085474	0	0	0	0.0	nan	0	0	0	0	26085474
G247_M02_statistics_for_all_accepted_reads	37461992	0	2975306	0	0	0	0	0	37461992	0	100.0	nan	34486686	0	17243343	0	17243343	0	34486686	0	100.0	nan	34486686	0	0	0	0.0	nan	0	0	0	0	37461992
G247_M02_statistics_for_primary_reads	34486686	0	0	0	0	0	0	0	34486686	0	100.0	nan	34486686	0	17243343	0	17243343	0	34486686	0	100.0	nan	34486686	0	0	0	0.0	nan	0	0	0	0	34486686
G247_M02_statistics_for_primary_unique_reads	32598230	0	0	0	0	0	0	0	32598230	0	100.0	nan	32598230	0	16299115	0	16299115	0	32598230	0	100.0	nan	32598230	0	0	0	0.0	nan	0	0	0	0	32598230
G247_M03_statistics_for_all_accepted_reads	40757726	0	3020432	0	0	0	0	0	40757726	0	100.0	nan	37737294	0	18868647	0	18868647	0	37737294	0	100.0	nan	37737294	0	0	0	0.0	nan	0	0	0	0	40757726
G247_M03_statistics_for_primary_reads	37737294	0	0	0	0	0	0	0	37737294	0	100.0	nan	37737294	0	18868647	0	18868647	0	37737294	0	100.0	nan	37737294	0	0	0	0.0	nan	0	0	0	0	37737294
G247_M03_statistics_for_primary_unique_reads	35715392	0	0	0	0	0	0	0	35715392	0	100.0	nan	35715392	0	17857696	0	17857696	0	35715392	0	100.0	nan	35715392	0	0	0	0.0	nan	0	0	0	0	35715392
G247_M04_statistics_for_all_accepted_reads	50898760	0	3703556	0	0	0	0	0	50898760	0	100.0	nan	47195204	0	23597602	0	23597602	0	47195204	0	100.0	nan	47195204	0	0	0	0.0	nan	0	0	0	0	50898760
G247_M04_statistics_for_primary_reads	47195204	0	0	0	0	0	0	0	47195204	0	100.0	nan	47195204	0	23597602	0	23597602	0	47195204	0	100.0	nan	47195204	0	0	0	0.0	nan	0	0	0	0	47195204
G247_M04_statistics_for_primary_unique_reads	44584062	0	0	0	0	0	0	0	44584062	0	100.0	nan	44584062	0	22292031	0	22292031	0	44584062	0	100.0	nan	44584062	0	0	0	0.0	nan	0	0	0	0	44584062
G247_M05_statistics_for_all_accepted_reads	53187610	0	3592654	0	0	0	0	0	53187610	0	100.0	nan	49594956	0	24797478	0	24797478	0	49594956	0	100.0	nan	49594956	0	0	0	0.0	nan	0	0	0	0	53187610
G247_M05_statistics_for_primary_reads	49594956	0	0	0	0	0	0	0	49594956	0	100.0	nan	49594956	0	24797478	0	24797478	0	49594956	0	100.0	nan	49594956	0	0	0	0.0	nan	0	0	0	0	49594956
G247_M05_statistics_for_primary_unique_reads	47058610	0	0	0	0	0	0	0	47058610	0	100.0	nan	47058610	0	23529305	0	23529305	0	47058610	0	100.0	nan	47058610	0	0	0	0.0	nan	0	0	0	0	47058610
G247_M06A_statistics_for_all_accepted_reads	40147096	0	2772538	0	0	0	0	0	40147096	0	100.0	nan	37374558	0	18687279	0	18687279	0	37374558	0	100.0	nan	37374558	0	0	0	0.0	nan	0	0	0	0	40147096
G247_M06A_statistics_for_primary_reads	37374558	0	0	0	0	0	0	0	37374558	0	100.0	nan	37374558	0	18687279	0	18687279	0	37374558	0	100.0	nan	37374558	0	0	0	0.0	nan	0	0	0	0	37374558
G247_M06A_statistics_for_primary_unique_reads	35439570	0	0	0	0	0	0	0	35439570	0	100.0	nan	35439570	0	17719785	0	17719785	0	35439570	0	100.0	nan	35439570	0	0	0	0.0	nan	0	0	0	0	35439570
G247_M06_statistics_for_all_accepted_reads	40362468	0	2775362	0	0	0	0	0	40362468	0	100.0	nan	37587106	0	18793553	0	18793553	0	37587106	0	100.0	nan	37587106	0	0	0	0.0	nan	0	0	0	0	40362468
G247_M06_statistics_for_primary_reads	37587106	0	0	0	0	0	0	0	37587106	0	100.0	nan	37587106	0	18793553	0	18793553	0	37587106	0	100.0	nan	37587106	0	0	0	0.0	nan	0	0	0	0	37587106
G247_M06_statistics_for_primary_unique_reads	35601912	0	0	0	0	0	0	0	35601912	0	100.0	nan	35601912	0	17800956	0	17800956	0	35601912	0	100.0	nan	35601912	0	0	0	0.0	nan	0	0	0	0	35601912
G247_M07_statistics_for_all_accepted_reads	32065092	0	2224226	0	0	0	0	0	32065092	0	100.0	nan	29840866	0	14920433	0	14920433	0	29840866	0	100.0	nan	29840866	0	0	0	0.0	nan	0	0	0	0	32065092
G247_M07_statistics_for_primary_reads	29840866	0	0	0	0	0	0	0	29840866	0	100.0	nan	29840866	0	14920433	0	14920433	0	29840866	0	100.0	nan	29840866	0	0	0	0.0	nan	0	0	0	0	29840866
G247_M07_statistics_for_primary_unique_reads	28222780	0	0	0	0	0	0	0	28222780	0	100.0	nan	28222780	0	14111390	0	14111390	0	28222780	0	100.0	nan	28222780	0	0	0	0.0	nan	0	0	0	0	28222780
G247_M08A_statistics_for_all_accepted_reads	29821590	0	2279152	0	0	0	0	0	29821590	0	100.0	nan	27542438	0	13771219	0	13771219	0	27542438	0	100.0	nan	27542438	0	0	0	0.0	nan	0	0	0	0	29821590
G247_M08A_statistics_for_primary_reads	27542438	0	0	0	0	0	0	0	27542438	0	100.0	nan	27542438	0	13771219	0	13771219	0	27542438	0	100.0	nan	27542438	0	0	0	0.0	nan	0	0	0	0	27542438
G247_M08A_statistics_for_primary_unique_reads	26035388	0	0	0	0	0	0	0	26035388	0	100.0	nan	26035388	0	13017694	0	13017694	0	26035388	0	100.0	nan	26035388	0	0	0	0.0	nan	0	0	0	0	26035388
G247_M08_statistics_for_all_accepted_reads	49666946	0	3913790	0	0	0	0	0	49666946	0	100.0	nan	45753156	0	22876578	0	22876578	0	45753156	0	100.0	nan	45753156	0	0	0	0.0	nan	0	0	0	0	49666946
G247_M08_statistics_for_primary_reads	45753156	0	0	0	0	0	0	0	45753156	0	100.0	nan	45753156	0	22876578	0	22876578	0	45753156	0	100.0	nan	45753156	0	0	0	0.0	nan	0	0	0	0	45753156
G247_M08_statistics_for_primary_unique_reads	43066990	0	0	0	0	0	0	0	43066990	0	100.0	nan	43066990	0	21533495	0	21533495	0	43066990	0	100.0	nan	43066990	0	0	0	0.0	nan	0	0	0	0	43066990
G247_M09A_statistics_for_all_accepted_reads	13054360	0	855274	0	0	0	0	0	13054360	0	100.0	nan	12199086	0	6099543	0	6099543	0	12199086	0	100.0	nan	12199086	0	0	0	0.0	nan	0	0	0	0	13054360
G247_M09A_statistics_for_primary_reads	12199086	0	0	0	0	0	0	0	12199086	0	100.0	nan	12199086	0	6099543	0	6099543	0	12199086	0	100.0	nan	12199086	0	0	0	0.0	nan	0	0	0	0	12199086
G247_M09A_statistics_for_primary_unique_reads	11723440	0	0	0	0	0	0	0	11723440	0	100.0	nan	11723440	0	5861720	0	5861720	0	11723440	0	100.0	nan	11723440	0	0	0	0.0	nan	0	0	0	0	11723440
G247_M09_statistics_for_all_accepted_reads	28852024	0	2176716	0	0	0	0	0	28852024	0	100.0	nan	26675308	0	13337654	0	13337654	0	26675308	0	100.0	nan	26675308	0	0	0	0.0	nan	0	0	0	0	28852024
G247_M09_statistics_for_primary_reads	26675308	0	0	0	0	0	0	0	26675308	0	100.0	nan	26675308	0	13337654	0	13337654	0	26675308	0	100.0	nan	26675308	0	0	0	0.0	nan	0	0	0	0	26675308
G247_M09_statistics_for_primary_unique_reads	25554998	0	0	0	0	0	0	0	25554998	0	100.0	nan	25554998	0	12777499	0	12777499	0	25554998	0	100.0	nan	25554998	0	0	0	0.0	nan	0	0	0	0	25554998
G247_M10_statistics_for_all_accepted_reads	44520738	0	4389246	0	0	0	0	0	44520738	0	100.0	nan	40131492	0	20065746	0	20065746	0	40131492	0	100.0	nan	40131492	0	0	0	0.0	nan	0	0	0	0	44520738
G247_M10_statistics_for_primary_reads	40131492	0	0	0	0	0	0	0	40131492	0	100.0	nan	40131492	0	20065746	0	20065746	0	40131492	0	100.0	nan	40131492	0	0	0	0.0	nan	0	0	0	0	40131492
G247_M10_statistics_for_primary_unique_reads	37610436	0	0	0	0	0	0	0	37610436	0	100.0	nan	37610436	0	18805218	0	18805218	0	37610436	0	100.0	nan	37610436	0	0	0	0.0	nan	0	0	0	0	37610436
G247_M11_statistics_for_all_accepted_reads	23162912	0	1972268	0	0	0	0	0	23162912	0	100.0	nan	21190644	0	10595322	0	10595322	0	21190644	0	100.0	nan	21190644	0	0	0	0.0	nan	0	0	0	0	23162912
G247_M11_statistics_for_primary_reads	21190644	0	0	0	0	0	0	0	21190644	0	100.0	nan	21190644	0	10595322	0	10595322	0	21190644	0	100.0	nan	21190644	0	0	0	0.0	nan	0	0	0	0	21190644
G247_M11_statistics_for_primary_unique_reads	19985788	0	0	0	0	0	0	0	19985788	0	100.0	nan	19985788	0	9992894	0	9992894	0	19985788	0	100.0	nan	19985788	0	0	0	0.0	nan	0	0	0	0	19985788
G247_M12_statistics_for_all_accepted_reads	42793692	0	3689520	0	0	0	0	0	42793692	0	100.0	nan	39104172	0	19552086	0	19552086	0	39104172	0	100.0	nan	39104172	0	0	0	0.0	nan	0	0	0	0	42793692
G247_M12_statistics_for_primary_reads	39104172	0	0	0	0	0	0	0	39104172	0	100.0	nan	39104172	0	19552086	0	19552086	0	39104172	0	100.0	nan	39104172	0	0	0	0.0	nan	0	0	0	0	39104172
G247_M12_statistics_for_primary_unique_reads	36628346	0	0	0	0	0	0	0	36628346	0	100.0	nan	36628346	0	18314173	0	18314173	0	36628346	0	100.0	nan	36628346	0	0	0	0.0	nan	0	0	0	0	36628346
G247_M13_statistics_for_all_accepted_reads	49833164	0	4221926	0	0	0	0	0	49833164	0	100.0	nan	45611238	0	22805619	0	22805619	0	45611238	0	100.0	nan	45611238	0	0	0	0.0	nan	0	0	0	0	49833164
G247_M13_statistics_for_primary_reads	45611238	0	0	0	0	0	0	0	45611238	0	100.0	nan	45611238	0	22805619	0	22805619	0	45611238	0	100.0	nan	45611238	0	0	0	0.0	nan	0	0	0	0	45611238
G247_M13_statistics_for_primary_unique_reads	42718204	0	0	0	0	0	0	0	42718204	0	100.0	nan	42718204	0	21359102	0	21359102	0	42718204	0	100.0	nan	42718204	0	0	0	0.0	nan	0	0	0	0	42718204
G247_M14_statistics_for_all_accepted_reads	32973332	0	3246008	0	0	0	0	0	32973332	0	100.0	nan	29727324	0	14863662	0	14863662	0	29727324	0	100.0	nan	29727324	0	0	0	0.0	nan	0	0	0	0	32973332
G247_M14_statistics_for_primary_reads	29727324	0	0	0	0	0	0	0	29727324	0	100.0	nan	29727324	0	14863662	0	14863662	0	29727324	0	100.0	nan	29727324	0	0	0	0.0	nan	0	0	0	0	29727324
G247_M14_statistics_for_primary_unique_reads	27808278	0	0	0	0	0	0	0	27808278	0	100.0	nan	27808278	0	13904139	0	13904139	0	27808278	0	100.0	nan	27808278	0	0	0	0.0	nan	0	0	0	0	27808278
G247_M15_statistics_for_all_accepted_reads	39072186	0	3456444	0	0	0	0	0	39072186	0	100.0	nan	35615742	0	17807871	0	17807871	0	35615742	0	100.0	nan	35615742	0	0	0	0.0	nan	0	0	0	0	39072186
G247_M15_statistics_for_primary_reads	35615742	0	0	0	0	0	0	0	35615742	0	100.0	nan	35615742	0	17807871	0	17807871	0	35615742	0	100.0	nan	35615742	0	0	0	0.0	nan	0	0	0	0	35615742
G247_M15_statistics_for_primary_unique_reads	33200548	0	0	0	0	0	0	0	33200548	0	100.0	nan	33200548	0	16600274	0	16600274	0	33200548	0	100.0	nan	33200548	0	0	0	0.0	nan	0	0	0	0	33200548
G247_M16_statistics_for_all_accepted_reads	22416694	0	1593440	0	0	0	0	0	22416694	0	100.0	nan	20823254	0	10411627	0	10411627	0	20823254	0	100.0	nan	20823254	0	0	0	0.0	nan	0	0	0	0	22416694
G247_M16_statistics_for_primary_reads	20823254	0	0	0	0	0	0	0	20823254	0	100.0	nan	20823254	0	10411627	0	10411627	0	20823254	0	100.0	nan	20823254	0	0	0	0.0	nan	0	0	0	0	20823254
G247_M16_statistics_for_primary_unique_reads	19754774	0	0	0	0	0	0	0	19754774	0	100.0	nan	19754774	0	9877387	0	9877387	0	19754774	0	100.0	nan	19754774	0	0	0	0.0	nan	0	0	0	0	19754774