Sample total_passed total_failed secondary_passed secondary_failed supplementary_passed supplementary_failed duplicates_passed duplicates_failed mapped_passed mapped_failed mapped_passed_pct mapped_failed_pct paired in sequencing_passed paired in sequencing_failed read1_passed read1_failed read2_passed read2_failed properly paired_passed properly paired_failed properly paired_passed_pct properly paired_failed_pct with itself and mate mapped_passed with itself and mate mapped_failed singletons_passed singletons_failed singletons_passed_pct singletons_failed_pct with mate mapped to a different chr_passed with mate mapped to a different chr_failed with mate mapped to a different chr (mapQ >= 5)_passed with mate mapped to a different chr (mapQ >= 5)_failed flagstat_total G251_M01_statistics_for_all_accepted_reads 61118470 0 6314887 0 0 0 0 0 61118470 0 100.0 nan 0 0 0 0 0 0 0 0 nan nan 0 0 0 0 nan nan 0 0 0 0 61118470 G251_M01_statistics_for_primary_reads 54803583 0 0 0 0 0 0 0 54803583 0 100.0 nan 0 0 0 0 0 0 0 0 nan nan 0 0 0 0 nan nan 0 0 0 0 54803583 G251_M01_statistics_for_primary_unique_reads 50553418 0 0 0 0 0 0 0 50553418 0 100.0 nan 0 0 0 0 0 0 0 0 nan nan 0 0 0 0 nan nan 0 0 0 0 50553418 G251_M02_statistics_for_all_accepted_reads 53493495 0 5587054 0 0 0 0 0 53493495 0 100.0 nan 0 0 0 0 0 0 0 0 nan nan 0 0 0 0 nan nan 0 0 0 0 53493495 G251_M02_statistics_for_primary_reads 47906441 0 0 0 0 0 0 0 47906441 0 100.0 nan 0 0 0 0 0 0 0 0 nan nan 0 0 0 0 nan nan 0 0 0 0 47906441 G251_M02_statistics_for_primary_unique_reads 44211054 0 0 0 0 0 0 0 44211054 0 100.0 nan 0 0 0 0 0 0 0 0 nan nan 0 0 0 0 nan nan 0 0 0 0 44211054 G251_M03_statistics_for_all_accepted_reads 42954451 0 5095290 0 0 0 0 0 42954451 0 100.0 nan 0 0 0 0 0 0 0 0 nan nan 0 0 0 0 nan nan 0 0 0 0 42954451 G251_M03_statistics_for_primary_reads 37859161 0 0 0 0 0 0 0 37859161 0 100.0 nan 0 0 0 0 0 0 0 0 nan nan 0 0 0 0 nan nan 0 0 0 0 37859161 G251_M03_statistics_for_primary_unique_reads 34340010 0 0 0 0 0 0 0 34340010 0 100.0 nan 0 0 0 0 0 0 0 0 nan nan 0 0 0 0 nan nan 0 0 0 0 34340010 G251_M04_statistics_for_all_accepted_reads 54900748 0 5324246 0 0 0 0 0 54900748 0 100.0 nan 0 0 0 0 0 0 0 0 nan nan 0 0 0 0 nan nan 0 0 0 0 54900748 G251_M04_statistics_for_primary_reads 49576502 0 0 0 0 0 0 0 49576502 0 100.0 nan 0 0 0 0 0 0 0 0 nan nan 0 0 0 0 nan nan 0 0 0 0 49576502 G251_M04_statistics_for_primary_unique_reads 46175266 0 0 0 0 0 0 0 46175266 0 100.0 nan 0 0 0 0 0 0 0 0 nan nan 0 0 0 0 nan nan 0 0 0 0 46175266 G251_M05_statistics_for_all_accepted_reads 49023305 0 4327137 0 0 0 0 0 49023305 0 100.0 nan 0 0 0 0 0 0 0 0 nan nan 0 0 0 0 nan nan 0 0 0 0 49023305 G251_M05_statistics_for_primary_reads 44696168 0 0 0 0 0 0 0 44696168 0 100.0 nan 0 0 0 0 0 0 0 0 nan nan 0 0 0 0 nan nan 0 0 0 0 44696168 G251_M05_statistics_for_primary_unique_reads 41872223 0 0 0 0 0 0 0 41872223 0 100.0 nan 0 0 0 0 0 0 0 0 nan nan 0 0 0 0 nan nan 0 0 0 0 41872223 G251_M06_statistics_for_all_accepted_reads 60602757 0 5918287 0 0 0 0 0 60602757 0 100.0 nan 0 0 0 0 0 0 0 0 nan nan 0 0 0 0 nan nan 0 0 0 0 60602757 G251_M06_statistics_for_primary_reads 54684470 0 0 0 0 0 0 0 54684470 0 100.0 nan 0 0 0 0 0 0 0 0 nan nan 0 0 0 0 nan nan 0 0 0 0 54684470 G251_M06_statistics_for_primary_unique_reads 50955739 0 0 0 0 0 0 0 50955739 0 100.0 nan 0 0 0 0 0 0 0 0 nan nan 0 0 0 0 nan nan 0 0 0 0 50955739 G251_M07_statistics_for_all_accepted_reads 49431703 0 6001574 0 0 0 0 0 49431703 0 100.0 nan 0 0 0 0 0 0 0 0 nan nan 0 0 0 0 nan nan 0 0 0 0 49431703 G251_M07_statistics_for_primary_reads 43430129 0 0 0 0 0 0 0 43430129 0 100.0 nan 0 0 0 0 0 0 0 0 nan nan 0 0 0 0 nan nan 0 0 0 0 43430129 G251_M07_statistics_for_primary_unique_reads 39565999 0 0 0 0 0 0 0 39565999 0 100.0 nan 0 0 0 0 0 0 0 0 nan nan 0 0 0 0 nan nan 0 0 0 0 39565999 G251_M08_statistics_for_all_accepted_reads 53197956 0 6809587 0 0 0 0 0 53197956 0 100.0 nan 0 0 0 0 0 0 0 0 nan nan 0 0 0 0 nan nan 0 0 0 0 53197956 G251_M08_statistics_for_primary_reads 46388369 0 0 0 0 0 0 0 46388369 0 100.0 nan 0 0 0 0 0 0 0 0 nan nan 0 0 0 0 nan nan 0 0 0 0 46388369 G251_M08_statistics_for_primary_unique_reads 42085281 0 0 0 0 0 0 0 42085281 0 100.0 nan 0 0 0 0 0 0 0 0 nan nan 0 0 0 0 nan nan 0 0 0 0 42085281 G251_M09_statistics_for_all_accepted_reads 51269272 0 6311024 0 0 0 0 0 51269272 0 100.0 nan 0 0 0 0 0 0 0 0 nan nan 0 0 0 0 nan nan 0 0 0 0 51269272 G251_M09_statistics_for_primary_reads 44958248 0 0 0 0 0 0 0 44958248 0 100.0 nan 0 0 0 0 0 0 0 0 nan nan 0 0 0 0 nan nan 0 0 0 0 44958248 G251_M09_statistics_for_primary_unique_reads 40770973 0 0 0 0 0 0 0 40770973 0 100.0 nan 0 0 0 0 0 0 0 0 nan nan 0 0 0 0 nan nan 0 0 0 0 40770973 G251_M10_statistics_for_all_accepted_reads 43455902 0 4774009 0 0 0 0 0 43455902 0 100.0 nan 0 0 0 0 0 0 0 0 nan nan 0 0 0 0 nan nan 0 0 0 0 43455902 G251_M10_statistics_for_primary_reads 38681893 0 0 0 0 0 0 0 38681893 0 100.0 nan 0 0 0 0 0 0 0 0 nan nan 0 0 0 0 nan nan 0 0 0 0 38681893 G251_M10_statistics_for_primary_unique_reads 35514901 0 0 0 0 0 0 0 35514901 0 100.0 nan 0 0 0 0 0 0 0 0 nan nan 0 0 0 0 nan nan 0 0 0 0 35514901 G251_M11_statistics_for_all_accepted_reads 53675074 0 5847632 0 0 0 0 0 53675074 0 100.0 nan 0 0 0 0 0 0 0 0 nan nan 0 0 0 0 nan nan 0 0 0 0 53675074 G251_M11_statistics_for_primary_reads 47827442 0 0 0 0 0 0 0 47827442 0 100.0 nan 0 0 0 0 0 0 0 0 nan nan 0 0 0 0 nan nan 0 0 0 0 47827442 G251_M11_statistics_for_primary_unique_reads 44069886 0 0 0 0 0 0 0 44069886 0 100.0 nan 0 0 0 0 0 0 0 0 nan nan 0 0 0 0 nan nan 0 0 0 0 44069886 G251_M12_statistics_for_all_accepted_reads 55971800 0 6405651 0 0 0 0 0 55971800 0 100.0 nan 0 0 0 0 0 0 0 0 nan nan 0 0 0 0 nan nan 0 0 0 0 55971800 G251_M12_statistics_for_primary_reads 49566149 0 0 0 0 0 0 0 49566149 0 100.0 nan 0 0 0 0 0 0 0 0 nan nan 0 0 0 0 nan nan 0 0 0 0 49566149 G251_M12_statistics_for_primary_unique_reads 45329483 0 0 0 0 0 0 0 45329483 0 100.0 nan 0 0 0 0 0 0 0 0 nan nan 0 0 0 0 nan nan 0 0 0 0 45329483 G251_M13_statistics_for_all_accepted_reads 33712569 0 6172344 0 0 0 0 0 33712569 0 100.0 nan 0 0 0 0 0 0 0 0 nan nan 0 0 0 0 nan nan 0 0 0 0 33712569 G251_M13_statistics_for_primary_reads 27540225 0 0 0 0 0 0 0 27540225 0 100.0 nan 0 0 0 0 0 0 0 0 nan nan 0 0 0 0 nan nan 0 0 0 0 27540225 G251_M13_statistics_for_primary_unique_reads 24413188 0 0 0 0 0 0 0 24413188 0 100.0 nan 0 0 0 0 0 0 0 0 nan nan 0 0 0 0 nan nan 0 0 0 0 24413188 G251_M14_statistics_for_all_accepted_reads 32330988 0 5870328 0 0 0 0 0 32330988 0 100.0 nan 0 0 0 0 0 0 0 0 nan nan 0 0 0 0 nan nan 0 0 0 0 32330988 G251_M14_statistics_for_primary_reads 26460660 0 0 0 0 0 0 0 26460660 0 100.0 nan 0 0 0 0 0 0 0 0 nan nan 0 0 0 0 nan nan 0 0 0 0 26460660 G251_M14_statistics_for_primary_unique_reads 23436665 0 0 0 0 0 0 0 23436665 0 100.0 nan 0 0 0 0 0 0 0 0 nan nan 0 0 0 0 nan nan 0 0 0 0 23436665 G251_M15_statistics_for_all_accepted_reads 36245427 0 6653396 0 0 0 0 0 36245427 0 100.0 nan 0 0 0 0 0 0 0 0 nan nan 0 0 0 0 nan nan 0 0 0 0 36245427 G251_M15_statistics_for_primary_reads 29592031 0 0 0 0 0 0 0 29592031 0 100.0 nan 0 0 0 0 0 0 0 0 nan nan 0 0 0 0 nan nan 0 0 0 0 29592031 G251_M15_statistics_for_primary_unique_reads 26067828 0 0 0 0 0 0 0 26067828 0 100.0 nan 0 0 0 0 0 0 0 0 nan nan 0 0 0 0 nan nan 0 0 0 0 26067828 G251_M16_statistics_for_all_accepted_reads 34169703 0 5517500 0 0 0 0 0 34169703 0 100.0 nan 0 0 0 0 0 0 0 0 nan nan 0 0 0 0 nan nan 0 0 0 0 34169703 G251_M16_statistics_for_primary_reads 28652203 0 0 0 0 0 0 0 28652203 0 100.0 nan 0 0 0 0 0 0 0 0 nan nan 0 0 0 0 nan nan 0 0 0 0 28652203 G251_M16_statistics_for_primary_unique_reads 25575707 0 0 0 0 0 0 0 25575707 0 100.0 nan 0 0 0 0 0 0 0 0 nan nan 0 0 0 0 nan nan 0 0 0 0 25575707 G251_M17_statistics_for_all_accepted_reads 32447776 0 4976585 0 0 0 0 0 32447776 0 100.0 nan 0 0 0 0 0 0 0 0 nan nan 0 0 0 0 nan nan 0 0 0 0 32447776 G251_M17_statistics_for_primary_reads 27471191 0 0 0 0 0 0 0 27471191 0 100.0 nan 0 0 0 0 0 0 0 0 nan nan 0 0 0 0 nan nan 0 0 0 0 27471191 G251_M17_statistics_for_primary_unique_reads 24658573 0 0 0 0 0 0 0 24658573 0 100.0 nan 0 0 0 0 0 0 0 0 nan nan 0 0 0 0 nan nan 0 0 0 0 24658573 G251_M18_statistics_for_all_accepted_reads 33658539 0 5234889 0 0 0 0 0 33658539 0 100.0 nan 0 0 0 0 0 0 0 0 nan nan 0 0 0 0 nan nan 0 0 0 0 33658539 G251_M18_statistics_for_primary_reads 28423650 0 0 0 0 0 0 0 28423650 0 100.0 nan 0 0 0 0 0 0 0 0 nan nan 0 0 0 0 nan nan 0 0 0 0 28423650 G251_M18_statistics_for_primary_unique_reads 25415710 0 0 0 0 0 0 0 25415710 0 100.0 nan 0 0 0 0 0 0 0 0 nan nan 0 0 0 0 nan nan 0 0 0 0 25415710