Module Section Sample Name Source RSeQC infer_experiment GSE118787_M7_Read_Strandness /projectnb/wax-dk/max/RK_grant_proposal/GSE118787/SAMPLES/GSE118787_M7/Read_Strandness/GSE118787_M7_Read_Strandness.txt RSeQC infer_experiment GSE118787_M18_Read_Strandness /projectnb/wax-dk/max/RK_grant_proposal/GSE118787/SAMPLES/GSE118787_M18/Read_Strandness/GSE118787_M18_Read_Strandness.txt RSeQC infer_experiment GSE118787_M12_Read_Strandness /projectnb/wax-dk/max/RK_grant_proposal/GSE118787/SAMPLES/GSE118787_M12/Read_Strandness/GSE118787_M12_Read_Strandness.txt RSeQC infer_experiment GSE118787_M13_Read_Strandness /projectnb/wax-dk/max/RK_grant_proposal/GSE118787/SAMPLES/GSE118787_M13/Read_Strandness/GSE118787_M13_Read_Strandness.txt RSeQC infer_experiment GSE118787_M9_Read_Strandness /projectnb/wax-dk/max/RK_grant_proposal/GSE118787/SAMPLES/GSE118787_M9/Read_Strandness/GSE118787_M9_Read_Strandness.txt RSeQC infer_experiment GSE118787_M14_Read_Strandness /projectnb/wax-dk/max/RK_grant_proposal/GSE118787/SAMPLES/GSE118787_M14/Read_Strandness/GSE118787_M14_Read_Strandness.txt RSeQC infer_experiment GSE118787_M10_Read_Strandness /projectnb/wax-dk/max/RK_grant_proposal/GSE118787/SAMPLES/GSE118787_M10/Read_Strandness/GSE118787_M10_Read_Strandness.txt RSeQC infer_experiment GSE118787_M24_Read_Strandness /projectnb/wax-dk/max/RK_grant_proposal/GSE118787/SAMPLES/GSE118787_M24/Read_Strandness/GSE118787_M24_Read_Strandness.txt RSeQC infer_experiment GSE118787_M20_Read_Strandness /projectnb/wax-dk/max/RK_grant_proposal/GSE118787/SAMPLES/GSE118787_M20/Read_Strandness/GSE118787_M20_Read_Strandness.txt RSeQC infer_experiment GSE118787_M16_Read_Strandness /projectnb/wax-dk/max/RK_grant_proposal/GSE118787/SAMPLES/GSE118787_M16/Read_Strandness/GSE118787_M16_Read_Strandness.txt RSeQC infer_experiment GSE118787_M5_Read_Strandness /projectnb/wax-dk/max/RK_grant_proposal/GSE118787/SAMPLES/GSE118787_M5/Read_Strandness/GSE118787_M5_Read_Strandness.txt RSeQC infer_experiment GSE118787_M3_Read_Strandness /projectnb/wax-dk/max/RK_grant_proposal/GSE118787/SAMPLES/GSE118787_M3/Read_Strandness/GSE118787_M3_Read_Strandness.txt RSeQC infer_experiment GSE118787_M21_Read_Strandness /projectnb/wax-dk/max/RK_grant_proposal/GSE118787/SAMPLES/GSE118787_M21/Read_Strandness/GSE118787_M21_Read_Strandness.txt RSeQC infer_experiment GSE118787_M11_Read_Strandness /projectnb/wax-dk/max/RK_grant_proposal/GSE118787/SAMPLES/GSE118787_M11/Read_Strandness/GSE118787_M11_Read_Strandness.txt RSeQC infer_experiment GSE118787_M19_Read_Strandness /projectnb/wax-dk/max/RK_grant_proposal/GSE118787/SAMPLES/GSE118787_M19/Read_Strandness/GSE118787_M19_Read_Strandness.txt RSeQC infer_experiment GSE118787_M15_Read_Strandness /projectnb/wax-dk/max/RK_grant_proposal/GSE118787/SAMPLES/GSE118787_M15/Read_Strandness/GSE118787_M15_Read_Strandness.txt RSeQC infer_experiment GSE118787_M17_Read_Strandness /projectnb/wax-dk/max/RK_grant_proposal/GSE118787/SAMPLES/GSE118787_M17/Read_Strandness/GSE118787_M17_Read_Strandness.txt RSeQC infer_experiment GSE118787_M2_Read_Strandness /projectnb/wax-dk/max/RK_grant_proposal/GSE118787/SAMPLES/GSE118787_M2/Read_Strandness/GSE118787_M2_Read_Strandness.txt RSeQC infer_experiment GSE118787_M22_Read_Strandness /projectnb/wax-dk/max/RK_grant_proposal/GSE118787/SAMPLES/GSE118787_M22/Read_Strandness/GSE118787_M22_Read_Strandness.txt RSeQC infer_experiment GSE118787_M4_Read_Strandness /projectnb/wax-dk/max/RK_grant_proposal/GSE118787/SAMPLES/GSE118787_M4/Read_Strandness/GSE118787_M4_Read_Strandness.txt RSeQC infer_experiment GSE118787_M6_Read_Strandness /projectnb/wax-dk/max/RK_grant_proposal/GSE118787/SAMPLES/GSE118787_M6/Read_Strandness/GSE118787_M6_Read_Strandness.txt RSeQC infer_experiment GSE118787_M1_Read_Strandness /projectnb/wax-dk/max/RK_grant_proposal/GSE118787/SAMPLES/GSE118787_M1/Read_Strandness/GSE118787_M1_Read_Strandness.txt RSeQC infer_experiment GSE118787_M23_Read_Strandness /projectnb/wax-dk/max/RK_grant_proposal/GSE118787/SAMPLES/GSE118787_M23/Read_Strandness/GSE118787_M23_Read_Strandness.txt RSeQC infer_experiment GSE118787_M8_Read_Strandness /projectnb/wax-dk/max/RK_grant_proposal/GSE118787/SAMPLES/GSE118787_M8/Read_Strandness/GSE118787_M8_Read_Strandness.txt featureCounts all_sections GSE118787_M7_sorted /projectnb/wax-dk/max/RK_grant_proposal/GSE118787/SAMPLES/GSE118787_M7/featureCounts/RefSeqLncRNA76k_FullGeneBody_GTF/GSE118787_M7_featureCounts.out.summary featureCounts all_sections GSE118787_M18_sorted /projectnb/wax-dk/max/RK_grant_proposal/GSE118787/SAMPLES/GSE118787_M18/featureCounts/RefSeqLncRNA76k_FullGeneBody_GTF/GSE118787_M18_featureCounts.out.summary featureCounts all_sections GSE118787_M12_sorted /projectnb/wax-dk/max/RK_grant_proposal/GSE118787/SAMPLES/GSE118787_M12/featureCounts/RefSeqLncRNA76k_FullGeneBody_GTF/GSE118787_M12_featureCounts.out.summary featureCounts all_sections GSE118787_M13_sorted /projectnb/wax-dk/max/RK_grant_proposal/GSE118787/SAMPLES/GSE118787_M13/featureCounts/RefSeqLncRNA76k_FullGeneBody_GTF/GSE118787_M13_featureCounts.out.summary featureCounts all_sections GSE118787_M9_sorted /projectnb/wax-dk/max/RK_grant_proposal/GSE118787/SAMPLES/GSE118787_M9/featureCounts/RefSeqLncRNA76k_FullGeneBody_GTF/GSE118787_M9_featureCounts.out.summary featureCounts all_sections GSE118787_M14_sorted /projectnb/wax-dk/max/RK_grant_proposal/GSE118787/SAMPLES/GSE118787_M14/featureCounts/RefSeqLncRNA76k_FullGeneBody_GTF/GSE118787_M14_featureCounts.out.summary featureCounts all_sections GSE118787_M10_sorted /projectnb/wax-dk/max/RK_grant_proposal/GSE118787/SAMPLES/GSE118787_M10/featureCounts/RefSeqLncRNA76k_FullGeneBody_GTF/GSE118787_M10_featureCounts.out.summary featureCounts all_sections GSE118787_M24_sorted /projectnb/wax-dk/max/RK_grant_proposal/GSE118787/SAMPLES/GSE118787_M24/featureCounts/RefSeqLncRNA76k_FullGeneBody_GTF/GSE118787_M24_featureCounts.out.summary featureCounts all_sections GSE118787_M20_sorted /projectnb/wax-dk/max/RK_grant_proposal/GSE118787/SAMPLES/GSE118787_M20/featureCounts/RefSeqLncRNA76k_FullGeneBody_GTF/GSE118787_M20_featureCounts.out.summary featureCounts all_sections GSE118787_M16_sorted /projectnb/wax-dk/max/RK_grant_proposal/GSE118787/SAMPLES/GSE118787_M16/featureCounts/RefSeqLncRNA76k_FullGeneBody_GTF/GSE118787_M16_featureCounts.out.summary featureCounts all_sections GSE118787_M5_sorted /projectnb/wax-dk/max/RK_grant_proposal/GSE118787/SAMPLES/GSE118787_M5/featureCounts/RefSeqLncRNA76k_FullGeneBody_GTF/GSE118787_M5_featureCounts.out.summary featureCounts all_sections GSE118787_M3_sorted /projectnb/wax-dk/max/RK_grant_proposal/GSE118787/SAMPLES/GSE118787_M3/featureCounts/RefSeqLncRNA76k_FullGeneBody_GTF/GSE118787_M3_featureCounts.out.summary featureCounts all_sections GSE118787_M21_sorted /projectnb/wax-dk/max/RK_grant_proposal/GSE118787/SAMPLES/GSE118787_M21/featureCounts/RefSeqLncRNA76k_FullGeneBody_GTF/GSE118787_M21_featureCounts.out.summary featureCounts all_sections GSE118787_M11_sorted /projectnb/wax-dk/max/RK_grant_proposal/GSE118787/SAMPLES/GSE118787_M11/featureCounts/RefSeqLncRNA76k_FullGeneBody_GTF/GSE118787_M11_featureCounts.out.summary featureCounts all_sections GSE118787_M19_sorted /projectnb/wax-dk/max/RK_grant_proposal/GSE118787/SAMPLES/GSE118787_M19/featureCounts/RefSeqLncRNA76k_FullGeneBody_GTF/GSE118787_M19_featureCounts.out.summary featureCounts all_sections GSE118787_M15_sorted /projectnb/wax-dk/max/RK_grant_proposal/GSE118787/SAMPLES/GSE118787_M15/featureCounts/RefSeqLncRNA76k_FullGeneBody_GTF/GSE118787_M15_featureCounts.out.summary featureCounts all_sections GSE118787_M17_sorted /projectnb/wax-dk/max/RK_grant_proposal/GSE118787/SAMPLES/GSE118787_M17/featureCounts/RefSeqLncRNA76k_FullGeneBody_GTF/GSE118787_M17_featureCounts.out.summary featureCounts all_sections GSE118787_M2_sorted /projectnb/wax-dk/max/RK_grant_proposal/GSE118787/SAMPLES/GSE118787_M2/featureCounts/RefSeqLncRNA76k_FullGeneBody_GTF/GSE118787_M2_featureCounts.out.summary featureCounts all_sections GSE118787_M22_sorted /projectnb/wax-dk/max/RK_grant_proposal/GSE118787/SAMPLES/GSE118787_M22/featureCounts/RefSeqLncRNA76k_FullGeneBody_GTF/GSE118787_M22_featureCounts.out.summary featureCounts all_sections GSE118787_M4_sorted /projectnb/wax-dk/max/RK_grant_proposal/GSE118787/SAMPLES/GSE118787_M4/featureCounts/RefSeqLncRNA76k_FullGeneBody_GTF/GSE118787_M4_featureCounts.out.summary featureCounts all_sections GSE118787_M6_sorted /projectnb/wax-dk/max/RK_grant_proposal/GSE118787/SAMPLES/GSE118787_M6/featureCounts/RefSeqLncRNA76k_FullGeneBody_GTF/GSE118787_M6_featureCounts.out.summary featureCounts all_sections GSE118787_M1_sorted /projectnb/wax-dk/max/RK_grant_proposal/GSE118787/SAMPLES/GSE118787_M1/featureCounts/RefSeqLncRNA76k_FullGeneBody_GTF/GSE118787_M1_featureCounts.out.summary featureCounts all_sections GSE118787_M23_sorted /projectnb/wax-dk/max/RK_grant_proposal/GSE118787/SAMPLES/GSE118787_M23/featureCounts/RefSeqLncRNA76k_FullGeneBody_GTF/GSE118787_M23_featureCounts.out.summary featureCounts all_sections GSE118787_M8_sorted /projectnb/wax-dk/max/RK_grant_proposal/GSE118787/SAMPLES/GSE118787_M8/featureCounts/RefSeqLncRNA76k_FullGeneBody_GTF/GSE118787_M8_featureCounts.out.summary Picard RnaSeqMetrics GSE118787_M7_primary_unique /projectnb/wax-dk/max/RK_grant_proposal/GSE118787/SAMPLES/GSE118787_M7/CollectRnaSeqMetrics/GSE118787_M7_metrics Picard RnaSeqMetrics GSE118787_M18_primary_unique /projectnb/wax-dk/max/RK_grant_proposal/GSE118787/SAMPLES/GSE118787_M18/CollectRnaSeqMetrics/GSE118787_M18_metrics Picard RnaSeqMetrics GSE118787_M12_primary_unique /projectnb/wax-dk/max/RK_grant_proposal/GSE118787/SAMPLES/GSE118787_M12/CollectRnaSeqMetrics/GSE118787_M12_metrics Picard RnaSeqMetrics GSE118787_M13_primary_unique /projectnb/wax-dk/max/RK_grant_proposal/GSE118787/SAMPLES/GSE118787_M13/CollectRnaSeqMetrics/GSE118787_M13_metrics Picard RnaSeqMetrics GSE118787_M9_primary_unique /projectnb/wax-dk/max/RK_grant_proposal/GSE118787/SAMPLES/GSE118787_M9/CollectRnaSeqMetrics/GSE118787_M9_metrics Picard RnaSeqMetrics GSE118787_M14_primary_unique /projectnb/wax-dk/max/RK_grant_proposal/GSE118787/SAMPLES/GSE118787_M14/CollectRnaSeqMetrics/GSE118787_M14_metrics Picard RnaSeqMetrics GSE118787_M10_primary_unique /projectnb/wax-dk/max/RK_grant_proposal/GSE118787/SAMPLES/GSE118787_M10/CollectRnaSeqMetrics/GSE118787_M10_metrics Picard RnaSeqMetrics GSE118787_M24_primary_unique /projectnb/wax-dk/max/RK_grant_proposal/GSE118787/SAMPLES/GSE118787_M24/CollectRnaSeqMetrics/GSE118787_M24_metrics Picard RnaSeqMetrics GSE118787_M20_primary_unique /projectnb/wax-dk/max/RK_grant_proposal/GSE118787/SAMPLES/GSE118787_M20/CollectRnaSeqMetrics/GSE118787_M20_metrics Picard RnaSeqMetrics GSE118787_M16_primary_unique /projectnb/wax-dk/max/RK_grant_proposal/GSE118787/SAMPLES/GSE118787_M16/CollectRnaSeqMetrics/GSE118787_M16_metrics Picard RnaSeqMetrics GSE118787_M5_primary_unique /projectnb/wax-dk/max/RK_grant_proposal/GSE118787/SAMPLES/GSE118787_M5/CollectRnaSeqMetrics/GSE118787_M5_metrics Picard RnaSeqMetrics GSE118787_M3_primary_unique /projectnb/wax-dk/max/RK_grant_proposal/GSE118787/SAMPLES/GSE118787_M3/CollectRnaSeqMetrics/GSE118787_M3_metrics Picard RnaSeqMetrics GSE118787_M21_primary_unique /projectnb/wax-dk/max/RK_grant_proposal/GSE118787/SAMPLES/GSE118787_M21/CollectRnaSeqMetrics/GSE118787_M21_metrics Picard RnaSeqMetrics GSE118787_M11_primary_unique /projectnb/wax-dk/max/RK_grant_proposal/GSE118787/SAMPLES/GSE118787_M11/CollectRnaSeqMetrics/GSE118787_M11_metrics Picard RnaSeqMetrics GSE118787_M19_primary_unique /projectnb/wax-dk/max/RK_grant_proposal/GSE118787/SAMPLES/GSE118787_M19/CollectRnaSeqMetrics/GSE118787_M19_metrics Picard RnaSeqMetrics GSE118787_M15_primary_unique /projectnb/wax-dk/max/RK_grant_proposal/GSE118787/SAMPLES/GSE118787_M15/CollectRnaSeqMetrics/GSE118787_M15_metrics Picard RnaSeqMetrics GSE118787_M17_primary_unique /projectnb/wax-dk/max/RK_grant_proposal/GSE118787/SAMPLES/GSE118787_M17/CollectRnaSeqMetrics/GSE118787_M17_metrics Picard RnaSeqMetrics GSE118787_M2_primary_unique /projectnb/wax-dk/max/RK_grant_proposal/GSE118787/SAMPLES/GSE118787_M2/CollectRnaSeqMetrics/GSE118787_M2_metrics Picard RnaSeqMetrics GSE118787_M22_primary_unique /projectnb/wax-dk/max/RK_grant_proposal/GSE118787/SAMPLES/GSE118787_M22/CollectRnaSeqMetrics/GSE118787_M22_metrics Picard RnaSeqMetrics GSE118787_M4_primary_unique /projectnb/wax-dk/max/RK_grant_proposal/GSE118787/SAMPLES/GSE118787_M4/CollectRnaSeqMetrics/GSE118787_M4_metrics Picard RnaSeqMetrics GSE118787_M6_primary_unique /projectnb/wax-dk/max/RK_grant_proposal/GSE118787/SAMPLES/GSE118787_M6/CollectRnaSeqMetrics/GSE118787_M6_metrics Picard RnaSeqMetrics GSE118787_M1_primary_unique /projectnb/wax-dk/max/RK_grant_proposal/GSE118787/SAMPLES/GSE118787_M1/CollectRnaSeqMetrics/GSE118787_M1_metrics Picard RnaSeqMetrics GSE118787_M23_primary_unique /projectnb/wax-dk/max/RK_grant_proposal/GSE118787/SAMPLES/GSE118787_M23/CollectRnaSeqMetrics/GSE118787_M23_metrics Picard RnaSeqMetrics GSE118787_M8_primary_unique /projectnb/wax-dk/max/RK_grant_proposal/GSE118787/SAMPLES/GSE118787_M8/CollectRnaSeqMetrics/GSE118787_M8_metrics Samtools flagstat GSE118787_M7_statistics_for_all_accepted_reads /projectnb/wax-dk/max/RK_grant_proposal/GSE118787/SAMPLES/GSE118787_M7/aligner/GSE118787_M7_statistics_for_all_accepted_reads.txt Samtools flagstat GSE118787_M7_statistics_for_primary_unique_reads /projectnb/wax-dk/max/RK_grant_proposal/GSE118787/SAMPLES/GSE118787_M7/aligner/GSE118787_M7_statistics_for_primary_unique_reads.txt Samtools flagstat GSE118787_M7_statistics_for_primary_reads /projectnb/wax-dk/max/RK_grant_proposal/GSE118787/SAMPLES/GSE118787_M7/aligner/GSE118787_M7_statistics_for_primary_reads.txt Samtools flagstat GSE118787_M18_statistics_for_primary_reads /projectnb/wax-dk/max/RK_grant_proposal/GSE118787/SAMPLES/GSE118787_M18/aligner/GSE118787_M18_statistics_for_primary_reads.txt Samtools flagstat GSE118787_M18_statistics_for_primary_unique_reads /projectnb/wax-dk/max/RK_grant_proposal/GSE118787/SAMPLES/GSE118787_M18/aligner/GSE118787_M18_statistics_for_primary_unique_reads.txt Samtools flagstat GSE118787_M18_statistics_for_all_accepted_reads /projectnb/wax-dk/max/RK_grant_proposal/GSE118787/SAMPLES/GSE118787_M18/aligner/GSE118787_M18_statistics_for_all_accepted_reads.txt Samtools flagstat GSE118787_M12_statistics_for_primary_reads /projectnb/wax-dk/max/RK_grant_proposal/GSE118787/SAMPLES/GSE118787_M12/aligner/GSE118787_M12_statistics_for_primary_reads.txt Samtools flagstat GSE118787_M12_statistics_for_all_accepted_reads /projectnb/wax-dk/max/RK_grant_proposal/GSE118787/SAMPLES/GSE118787_M12/aligner/GSE118787_M12_statistics_for_all_accepted_reads.txt Samtools flagstat GSE118787_M12_statistics_for_primary_unique_reads /projectnb/wax-dk/max/RK_grant_proposal/GSE118787/SAMPLES/GSE118787_M12/aligner/GSE118787_M12_statistics_for_primary_unique_reads.txt Samtools flagstat GSE118787_M13_statistics_for_primary_reads /projectnb/wax-dk/max/RK_grant_proposal/GSE118787/SAMPLES/GSE118787_M13/aligner/GSE118787_M13_statistics_for_primary_reads.txt Samtools flagstat GSE118787_M13_statistics_for_all_accepted_reads /projectnb/wax-dk/max/RK_grant_proposal/GSE118787/SAMPLES/GSE118787_M13/aligner/GSE118787_M13_statistics_for_all_accepted_reads.txt Samtools flagstat GSE118787_M13_statistics_for_primary_unique_reads /projectnb/wax-dk/max/RK_grant_proposal/GSE118787/SAMPLES/GSE118787_M13/aligner/GSE118787_M13_statistics_for_primary_unique_reads.txt Samtools flagstat GSE118787_M9_statistics_for_primary_unique_reads /projectnb/wax-dk/max/RK_grant_proposal/GSE118787/SAMPLES/GSE118787_M9/aligner/GSE118787_M9_statistics_for_primary_unique_reads.txt Samtools flagstat GSE118787_M9_statistics_for_primary_reads /projectnb/wax-dk/max/RK_grant_proposal/GSE118787/SAMPLES/GSE118787_M9/aligner/GSE118787_M9_statistics_for_primary_reads.txt Samtools flagstat GSE118787_M9_statistics_for_all_accepted_reads /projectnb/wax-dk/max/RK_grant_proposal/GSE118787/SAMPLES/GSE118787_M9/aligner/GSE118787_M9_statistics_for_all_accepted_reads.txt Samtools flagstat GSE118787_M14_statistics_for_primary_unique_reads /projectnb/wax-dk/max/RK_grant_proposal/GSE118787/SAMPLES/GSE118787_M14/aligner/GSE118787_M14_statistics_for_primary_unique_reads.txt Samtools flagstat GSE118787_M14_statistics_for_all_accepted_reads /projectnb/wax-dk/max/RK_grant_proposal/GSE118787/SAMPLES/GSE118787_M14/aligner/GSE118787_M14_statistics_for_all_accepted_reads.txt Samtools flagstat GSE118787_M14_statistics_for_primary_reads /projectnb/wax-dk/max/RK_grant_proposal/GSE118787/SAMPLES/GSE118787_M14/aligner/GSE118787_M14_statistics_for_primary_reads.txt Samtools flagstat GSE118787_M10_statistics_for_all_accepted_reads /projectnb/wax-dk/max/RK_grant_proposal/GSE118787/SAMPLES/GSE118787_M10/aligner/GSE118787_M10_statistics_for_all_accepted_reads.txt Samtools flagstat GSE118787_M10_statistics_for_primary_reads /projectnb/wax-dk/max/RK_grant_proposal/GSE118787/SAMPLES/GSE118787_M10/aligner/GSE118787_M10_statistics_for_primary_reads.txt Samtools flagstat GSE118787_M10_statistics_for_primary_unique_reads /projectnb/wax-dk/max/RK_grant_proposal/GSE118787/SAMPLES/GSE118787_M10/aligner/GSE118787_M10_statistics_for_primary_unique_reads.txt Samtools flagstat GSE118787_M24_statistics_for_primary_reads /projectnb/wax-dk/max/RK_grant_proposal/GSE118787/SAMPLES/GSE118787_M24/aligner/GSE118787_M24_statistics_for_primary_reads.txt Samtools flagstat GSE118787_M24_statistics_for_primary_unique_reads /projectnb/wax-dk/max/RK_grant_proposal/GSE118787/SAMPLES/GSE118787_M24/aligner/GSE118787_M24_statistics_for_primary_unique_reads.txt Samtools flagstat GSE118787_M24_statistics_for_all_accepted_reads /projectnb/wax-dk/max/RK_grant_proposal/GSE118787/SAMPLES/GSE118787_M24/aligner/GSE118787_M24_statistics_for_all_accepted_reads.txt Samtools flagstat GSE118787_M20_statistics_for_all_accepted_reads /projectnb/wax-dk/max/RK_grant_proposal/GSE118787/SAMPLES/GSE118787_M20/aligner/GSE118787_M20_statistics_for_all_accepted_reads.txt Samtools flagstat GSE118787_M20_statistics_for_primary_reads /projectnb/wax-dk/max/RK_grant_proposal/GSE118787/SAMPLES/GSE118787_M20/aligner/GSE118787_M20_statistics_for_primary_reads.txt Samtools flagstat GSE118787_M20_statistics_for_primary_unique_reads /projectnb/wax-dk/max/RK_grant_proposal/GSE118787/SAMPLES/GSE118787_M20/aligner/GSE118787_M20_statistics_for_primary_unique_reads.txt Samtools flagstat GSE118787_M16_statistics_for_all_accepted_reads /projectnb/wax-dk/max/RK_grant_proposal/GSE118787/SAMPLES/GSE118787_M16/aligner/GSE118787_M16_statistics_for_all_accepted_reads.txt Samtools flagstat GSE118787_M16_statistics_for_primary_unique_reads /projectnb/wax-dk/max/RK_grant_proposal/GSE118787/SAMPLES/GSE118787_M16/aligner/GSE118787_M16_statistics_for_primary_unique_reads.txt Samtools flagstat GSE118787_M16_statistics_for_primary_reads /projectnb/wax-dk/max/RK_grant_proposal/GSE118787/SAMPLES/GSE118787_M16/aligner/GSE118787_M16_statistics_for_primary_reads.txt Samtools flagstat GSE118787_M5_statistics_for_all_accepted_reads /projectnb/wax-dk/max/RK_grant_proposal/GSE118787/SAMPLES/GSE118787_M5/aligner/GSE118787_M5_statistics_for_all_accepted_reads.txt Samtools flagstat GSE118787_M5_statistics_for_primary_unique_reads /projectnb/wax-dk/max/RK_grant_proposal/GSE118787/SAMPLES/GSE118787_M5/aligner/GSE118787_M5_statistics_for_primary_unique_reads.txt Samtools flagstat GSE118787_M5_statistics_for_primary_reads /projectnb/wax-dk/max/RK_grant_proposal/GSE118787/SAMPLES/GSE118787_M5/aligner/GSE118787_M5_statistics_for_primary_reads.txt Samtools flagstat GSE118787_M3_statistics_for_primary_reads /projectnb/wax-dk/max/RK_grant_proposal/GSE118787/SAMPLES/GSE118787_M3/aligner/GSE118787_M3_statistics_for_primary_reads.txt Samtools flagstat GSE118787_M3_statistics_for_primary_unique_reads /projectnb/wax-dk/max/RK_grant_proposal/GSE118787/SAMPLES/GSE118787_M3/aligner/GSE118787_M3_statistics_for_primary_unique_reads.txt Samtools flagstat GSE118787_M3_statistics_for_all_accepted_reads /projectnb/wax-dk/max/RK_grant_proposal/GSE118787/SAMPLES/GSE118787_M3/aligner/GSE118787_M3_statistics_for_all_accepted_reads.txt Samtools flagstat GSE118787_M21_statistics_for_primary_unique_reads /projectnb/wax-dk/max/RK_grant_proposal/GSE118787/SAMPLES/GSE118787_M21/aligner/GSE118787_M21_statistics_for_primary_unique_reads.txt Samtools flagstat GSE118787_M21_statistics_for_all_accepted_reads /projectnb/wax-dk/max/RK_grant_proposal/GSE118787/SAMPLES/GSE118787_M21/aligner/GSE118787_M21_statistics_for_all_accepted_reads.txt Samtools flagstat GSE118787_M21_statistics_for_primary_reads /projectnb/wax-dk/max/RK_grant_proposal/GSE118787/SAMPLES/GSE118787_M21/aligner/GSE118787_M21_statistics_for_primary_reads.txt Samtools flagstat GSE118787_M11_statistics_for_primary_reads /projectnb/wax-dk/max/RK_grant_proposal/GSE118787/SAMPLES/GSE118787_M11/aligner/GSE118787_M11_statistics_for_primary_reads.txt Samtools flagstat GSE118787_M11_statistics_for_primary_unique_reads /projectnb/wax-dk/max/RK_grant_proposal/GSE118787/SAMPLES/GSE118787_M11/aligner/GSE118787_M11_statistics_for_primary_unique_reads.txt Samtools flagstat GSE118787_M11_statistics_for_all_accepted_reads /projectnb/wax-dk/max/RK_grant_proposal/GSE118787/SAMPLES/GSE118787_M11/aligner/GSE118787_M11_statistics_for_all_accepted_reads.txt Samtools flagstat GSE118787_M19_statistics_for_primary_unique_reads /projectnb/wax-dk/max/RK_grant_proposal/GSE118787/SAMPLES/GSE118787_M19/aligner/GSE118787_M19_statistics_for_primary_unique_reads.txt Samtools flagstat GSE118787_M19_statistics_for_all_accepted_reads /projectnb/wax-dk/max/RK_grant_proposal/GSE118787/SAMPLES/GSE118787_M19/aligner/GSE118787_M19_statistics_for_all_accepted_reads.txt Samtools flagstat GSE118787_M19_statistics_for_primary_reads /projectnb/wax-dk/max/RK_grant_proposal/GSE118787/SAMPLES/GSE118787_M19/aligner/GSE118787_M19_statistics_for_primary_reads.txt Samtools flagstat GSE118787_M15_statistics_for_all_accepted_reads /projectnb/wax-dk/max/RK_grant_proposal/GSE118787/SAMPLES/GSE118787_M15/aligner/GSE118787_M15_statistics_for_all_accepted_reads.txt Samtools flagstat GSE118787_M15_statistics_for_primary_unique_reads /projectnb/wax-dk/max/RK_grant_proposal/GSE118787/SAMPLES/GSE118787_M15/aligner/GSE118787_M15_statistics_for_primary_unique_reads.txt Samtools flagstat GSE118787_M15_statistics_for_primary_reads /projectnb/wax-dk/max/RK_grant_proposal/GSE118787/SAMPLES/GSE118787_M15/aligner/GSE118787_M15_statistics_for_primary_reads.txt Samtools flagstat GSE118787_M17_statistics_for_primary_reads /projectnb/wax-dk/max/RK_grant_proposal/GSE118787/SAMPLES/GSE118787_M17/aligner/GSE118787_M17_statistics_for_primary_reads.txt Samtools flagstat GSE118787_M17_statistics_for_primary_unique_reads /projectnb/wax-dk/max/RK_grant_proposal/GSE118787/SAMPLES/GSE118787_M17/aligner/GSE118787_M17_statistics_for_primary_unique_reads.txt Samtools flagstat GSE118787_M17_statistics_for_all_accepted_reads /projectnb/wax-dk/max/RK_grant_proposal/GSE118787/SAMPLES/GSE118787_M17/aligner/GSE118787_M17_statistics_for_all_accepted_reads.txt Samtools flagstat GSE118787_M2_statistics_for_primary_reads /projectnb/wax-dk/max/RK_grant_proposal/GSE118787/SAMPLES/GSE118787_M2/aligner/GSE118787_M2_statistics_for_primary_reads.txt Samtools flagstat GSE118787_M2_statistics_for_primary_unique_reads /projectnb/wax-dk/max/RK_grant_proposal/GSE118787/SAMPLES/GSE118787_M2/aligner/GSE118787_M2_statistics_for_primary_unique_reads.txt Samtools flagstat GSE118787_M2_statistics_for_all_accepted_reads /projectnb/wax-dk/max/RK_grant_proposal/GSE118787/SAMPLES/GSE118787_M2/aligner/GSE118787_M2_statistics_for_all_accepted_reads.txt Samtools flagstat GSE118787_M22_statistics_for_primary_reads /projectnb/wax-dk/max/RK_grant_proposal/GSE118787/SAMPLES/GSE118787_M22/aligner/GSE118787_M22_statistics_for_primary_reads.txt Samtools flagstat GSE118787_M22_statistics_for_all_accepted_reads /projectnb/wax-dk/max/RK_grant_proposal/GSE118787/SAMPLES/GSE118787_M22/aligner/GSE118787_M22_statistics_for_all_accepted_reads.txt Samtools flagstat GSE118787_M22_statistics_for_primary_unique_reads /projectnb/wax-dk/max/RK_grant_proposal/GSE118787/SAMPLES/GSE118787_M22/aligner/GSE118787_M22_statistics_for_primary_unique_reads.txt Samtools flagstat GSE118787_M4_statistics_for_primary_unique_reads /projectnb/wax-dk/max/RK_grant_proposal/GSE118787/SAMPLES/GSE118787_M4/aligner/GSE118787_M4_statistics_for_primary_unique_reads.txt Samtools flagstat GSE118787_M4_statistics_for_primary_reads /projectnb/wax-dk/max/RK_grant_proposal/GSE118787/SAMPLES/GSE118787_M4/aligner/GSE118787_M4_statistics_for_primary_reads.txt Samtools flagstat GSE118787_M4_statistics_for_all_accepted_reads /projectnb/wax-dk/max/RK_grant_proposal/GSE118787/SAMPLES/GSE118787_M4/aligner/GSE118787_M4_statistics_for_all_accepted_reads.txt Samtools flagstat GSE118787_M6_statistics_for_primary_reads /projectnb/wax-dk/max/RK_grant_proposal/GSE118787/SAMPLES/GSE118787_M6/aligner/GSE118787_M6_statistics_for_primary_reads.txt Samtools flagstat GSE118787_M6_statistics_for_primary_unique_reads /projectnb/wax-dk/max/RK_grant_proposal/GSE118787/SAMPLES/GSE118787_M6/aligner/GSE118787_M6_statistics_for_primary_unique_reads.txt Samtools flagstat GSE118787_M6_statistics_for_all_accepted_reads /projectnb/wax-dk/max/RK_grant_proposal/GSE118787/SAMPLES/GSE118787_M6/aligner/GSE118787_M6_statistics_for_all_accepted_reads.txt Samtools flagstat GSE118787_M1_statistics_for_primary_unique_reads /projectnb/wax-dk/max/RK_grant_proposal/GSE118787/SAMPLES/GSE118787_M1/aligner/GSE118787_M1_statistics_for_primary_unique_reads.txt Samtools flagstat GSE118787_M1_statistics_for_primary_reads /projectnb/wax-dk/max/RK_grant_proposal/GSE118787/SAMPLES/GSE118787_M1/aligner/GSE118787_M1_statistics_for_primary_reads.txt Samtools flagstat GSE118787_M1_statistics_for_all_accepted_reads /projectnb/wax-dk/max/RK_grant_proposal/GSE118787/SAMPLES/GSE118787_M1/aligner/GSE118787_M1_statistics_for_all_accepted_reads.txt Samtools flagstat GSE118787_M23_statistics_for_primary_unique_reads /projectnb/wax-dk/max/RK_grant_proposal/GSE118787/SAMPLES/GSE118787_M23/aligner/GSE118787_M23_statistics_for_primary_unique_reads.txt Samtools flagstat 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