Sample total_passed total_failed secondary_passed secondary_failed supplementary_passed supplementary_failed duplicates_passed duplicates_failed mapped_passed mapped_failed mapped_passed_pct mapped_failed_pct paired in sequencing_passed paired in sequencing_failed read1_passed read1_failed read2_passed read2_failed properly paired_passed properly paired_failed properly paired_passed_pct properly paired_failed_pct with itself and mate mapped_passed with itself and mate mapped_failed singletons_passed singletons_failed singletons_passed_pct singletons_failed_pct with mate mapped to a different chr_passed with mate mapped to a different chr_failed with mate mapped to a different chr (mapQ >= 5)_passed with mate mapped to a different chr (mapQ >= 5)_failed flagstat_total GSE138391_M10_statistics_for_all_accepted_reads 13586275 0 2484183 0 0 0 0 0 13586275 0 100.0 nan 0 0 0 0 0 0 0 0 nan nan 0 0 0 0 nan nan 0 0 0 0 13586275 GSE138391_M10_statistics_for_primary_reads 11102092 0 0 0 0 0 0 0 11102092 0 100.0 nan 0 0 0 0 0 0 0 0 nan nan 0 0 0 0 nan nan 0 0 0 0 11102092 GSE138391_M10_statistics_for_primary_unique_reads 9848575 0 0 0 0 0 0 0 9848575 0 100.0 nan 0 0 0 0 0 0 0 0 nan nan 0 0 0 0 nan nan 0 0 0 0 9848575 GSE138391_M11_statistics_for_all_accepted_reads 14633433 0 2968119 0 0 0 0 0 14633433 0 100.0 nan 0 0 0 0 0 0 0 0 nan nan 0 0 0 0 nan nan 0 0 0 0 14633433 GSE138391_M11_statistics_for_primary_reads 11665314 0 0 0 0 0 0 0 11665314 0 100.0 nan 0 0 0 0 0 0 0 0 nan nan 0 0 0 0 nan nan 0 0 0 0 11665314 GSE138391_M11_statistics_for_primary_unique_reads 10135895 0 0 0 0 0 0 0 10135895 0 100.0 nan 0 0 0 0 0 0 0 0 nan nan 0 0 0 0 nan nan 0 0 0 0 10135895 GSE138391_M12_statistics_for_all_accepted_reads 16061234 0 3149641 0 0 0 0 0 16061234 0 100.0 nan 0 0 0 0 0 0 0 0 nan nan 0 0 0 0 nan nan 0 0 0 0 16061234 GSE138391_M12_statistics_for_primary_reads 12911593 0 0 0 0 0 0 0 12911593 0 100.0 nan 0 0 0 0 0 0 0 0 nan nan 0 0 0 0 nan nan 0 0 0 0 12911593 GSE138391_M12_statistics_for_primary_unique_reads 11339790 0 0 0 0 0 0 0 11339790 0 100.0 nan 0 0 0 0 0 0 0 0 nan nan 0 0 0 0 nan nan 0 0 0 0 11339790 GSE138391_M13_statistics_for_all_accepted_reads 14246068 0 1972071 0 0 0 0 0 14246068 0 100.0 nan 0 0 0 0 0 0 0 0 nan nan 0 0 0 0 nan nan 0 0 0 0 14246068 GSE138391_M13_statistics_for_primary_reads 12273997 0 0 0 0 0 0 0 12273997 0 100.0 nan 0 0 0 0 0 0 0 0 nan nan 0 0 0 0 nan nan 0 0 0 0 12273997 GSE138391_M13_statistics_for_primary_unique_reads 11110290 0 0 0 0 0 0 0 11110290 0 100.0 nan 0 0 0 0 0 0 0 0 nan nan 0 0 0 0 nan nan 0 0 0 0 11110290 GSE138391_M14_statistics_for_all_accepted_reads 16892028 0 2576734 0 0 0 0 0 16892028 0 100.0 nan 0 0 0 0 0 0 0 0 nan nan 0 0 0 0 nan nan 0 0 0 0 16892028 GSE138391_M14_statistics_for_primary_reads 14315294 0 0 0 0 0 0 0 14315294 0 100.0 nan 0 0 0 0 0 0 0 0 nan nan 0 0 0 0 nan nan 0 0 0 0 14315294 GSE138391_M14_statistics_for_primary_unique_reads 12930414 0 0 0 0 0 0 0 12930414 0 100.0 nan 0 0 0 0 0 0 0 0 nan nan 0 0 0 0 nan nan 0 0 0 0 12930414 GSE138391_M15_statistics_for_all_accepted_reads 15190347 0 2227765 0 0 0 0 0 15190347 0 100.0 nan 0 0 0 0 0 0 0 0 nan nan 0 0 0 0 nan nan 0 0 0 0 15190347 GSE138391_M15_statistics_for_primary_reads 12962582 0 0 0 0 0 0 0 12962582 0 100.0 nan 0 0 0 0 0 0 0 0 nan nan 0 0 0 0 nan nan 0 0 0 0 12962582 GSE138391_M15_statistics_for_primary_unique_reads 11684234 0 0 0 0 0 0 0 11684234 0 100.0 nan 0 0 0 0 0 0 0 0 nan nan 0 0 0 0 nan nan 0 0 0 0 11684234 GSE138391_M16_statistics_for_all_accepted_reads 14857804 0 2270109 0 0 0 0 0 14857804 0 100.0 nan 0 0 0 0 0 0 0 0 nan nan 0 0 0 0 nan nan 0 0 0 0 14857804 GSE138391_M16_statistics_for_primary_reads 12587695 0 0 0 0 0 0 0 12587695 0 100.0 nan 0 0 0 0 0 0 0 0 nan nan 0 0 0 0 nan nan 0 0 0 0 12587695 GSE138391_M16_statistics_for_primary_unique_reads 11271164 0 0 0 0 0 0 0 11271164 0 100.0 nan 0 0 0 0 0 0 0 0 nan nan 0 0 0 0 nan nan 0 0 0 0 11271164 GSE138391_M17_statistics_for_all_accepted_reads 16232842 0 2482712 0 0 0 0 0 16232842 0 100.0 nan 0 0 0 0 0 0 0 0 nan nan 0 0 0 0 nan nan 0 0 0 0 16232842 GSE138391_M17_statistics_for_primary_reads 13750130 0 0 0 0 0 0 0 13750130 0 100.0 nan 0 0 0 0 0 0 0 0 nan nan 0 0 0 0 nan nan 0 0 0 0 13750130 GSE138391_M17_statistics_for_primary_unique_reads 12253527 0 0 0 0 0 0 0 12253527 0 100.0 nan 0 0 0 0 0 0 0 0 nan nan 0 0 0 0 nan nan 0 0 0 0 12253527 GSE138391_M18_statistics_for_all_accepted_reads 17362141 0 2943789 0 0 0 0 0 17362141 0 100.0 nan 0 0 0 0 0 0 0 0 nan nan 0 0 0 0 nan nan 0 0 0 0 17362141 GSE138391_M18_statistics_for_primary_reads 14418352 0 0 0 0 0 0 0 14418352 0 100.0 nan 0 0 0 0 0 0 0 0 nan nan 0 0 0 0 nan nan 0 0 0 0 14418352 GSE138391_M18_statistics_for_primary_unique_reads 12640021 0 0 0 0 0 0 0 12640021 0 100.0 nan 0 0 0 0 0 0 0 0 nan nan 0 0 0 0 nan nan 0 0 0 0 12640021 GSE138391_M19_statistics_for_all_accepted_reads 15734003 0 2391800 0 0 0 0 0 15734003 0 100.0 nan 0 0 0 0 0 0 0 0 nan nan 0 0 0 0 nan nan 0 0 0 0 15734003 GSE138391_M19_statistics_for_primary_reads 13342203 0 0 0 0 0 0 0 13342203 0 100.0 nan 0 0 0 0 0 0 0 0 nan nan 0 0 0 0 nan nan 0 0 0 0 13342203 GSE138391_M19_statistics_for_primary_unique_reads 11806996 0 0 0 0 0 0 0 11806996 0 100.0 nan 0 0 0 0 0 0 0 0 nan nan 0 0 0 0 nan nan 0 0 0 0 11806996 GSE138391_M1_statistics_for_all_accepted_reads 12829782 0 1896507 0 0 0 0 0 12829782 0 100.0 nan 0 0 0 0 0 0 0 0 nan nan 0 0 0 0 nan nan 0 0 0 0 12829782 GSE138391_M1_statistics_for_primary_reads 10933275 0 0 0 0 0 0 0 10933275 0 100.0 nan 0 0 0 0 0 0 0 0 nan nan 0 0 0 0 nan nan 0 0 0 0 10933275 GSE138391_M1_statistics_for_primary_unique_reads 9679342 0 0 0 0 0 0 0 9679342 0 100.0 nan 0 0 0 0 0 0 0 0 nan nan 0 0 0 0 nan nan 0 0 0 0 9679342 GSE138391_M20_statistics_for_all_accepted_reads 16602716 0 3017109 0 0 0 0 0 16602716 0 100.0 nan 0 0 0 0 0 0 0 0 nan nan 0 0 0 0 nan nan 0 0 0 0 16602716 GSE138391_M20_statistics_for_primary_reads 13585607 0 0 0 0 0 0 0 13585607 0 100.0 nan 0 0 0 0 0 0 0 0 nan nan 0 0 0 0 nan nan 0 0 0 0 13585607 GSE138391_M20_statistics_for_primary_unique_reads 11945231 0 0 0 0 0 0 0 11945231 0 100.0 nan 0 0 0 0 0 0 0 0 nan nan 0 0 0 0 nan nan 0 0 0 0 11945231 GSE138391_M21_statistics_for_all_accepted_reads 12237181 0 1779367 0 0 0 0 0 12237181 0 100.0 nan 0 0 0 0 0 0 0 0 nan nan 0 0 0 0 nan nan 0 0 0 0 12237181 GSE138391_M21_statistics_for_primary_reads 10457814 0 0 0 0 0 0 0 10457814 0 100.0 nan 0 0 0 0 0 0 0 0 nan nan 0 0 0 0 nan nan 0 0 0 0 10457814 GSE138391_M21_statistics_for_primary_unique_reads 9385843 0 0 0 0 0 0 0 9385843 0 100.0 nan 0 0 0 0 0 0 0 0 nan nan 0 0 0 0 nan nan 0 0 0 0 9385843 GSE138391_M22_statistics_for_all_accepted_reads 12870728 0 1827969 0 0 0 0 0 12870728 0 100.0 nan 0 0 0 0 0 0 0 0 nan nan 0 0 0 0 nan nan 0 0 0 0 12870728 GSE138391_M22_statistics_for_primary_reads 11042759 0 0 0 0 0 0 0 11042759 0 100.0 nan 0 0 0 0 0 0 0 0 nan nan 0 0 0 0 nan nan 0 0 0 0 11042759 GSE138391_M22_statistics_for_primary_unique_reads 9913348 0 0 0 0 0 0 0 9913348 0 100.0 nan 0 0 0 0 0 0 0 0 nan nan 0 0 0 0 nan nan 0 0 0 0 9913348 GSE138391_M23_statistics_for_all_accepted_reads 11676729 0 1627340 0 0 0 0 0 11676729 0 100.0 nan 0 0 0 0 0 0 0 0 nan nan 0 0 0 0 nan nan 0 0 0 0 11676729 GSE138391_M23_statistics_for_primary_reads 10049389 0 0 0 0 0 0 0 10049389 0 100.0 nan 0 0 0 0 0 0 0 0 nan nan 0 0 0 0 nan nan 0 0 0 0 10049389 GSE138391_M23_statistics_for_primary_unique_reads 9026179 0 0 0 0 0 0 0 9026179 0 100.0 nan 0 0 0 0 0 0 0 0 nan nan 0 0 0 0 nan nan 0 0 0 0 9026179 GSE138391_M24_statistics_for_all_accepted_reads 13219184 0 1883213 0 0 0 0 0 13219184 0 100.0 nan 0 0 0 0 0 0 0 0 nan nan 0 0 0 0 nan nan 0 0 0 0 13219184 GSE138391_M24_statistics_for_primary_reads 11335971 0 0 0 0 0 0 0 11335971 0 100.0 nan 0 0 0 0 0 0 0 0 nan nan 0 0 0 0 nan nan 0 0 0 0 11335971 GSE138391_M24_statistics_for_primary_unique_reads 10080198 0 0 0 0 0 0 0 10080198 0 100.0 nan 0 0 0 0 0 0 0 0 nan nan 0 0 0 0 nan nan 0 0 0 0 10080198 GSE138391_M25_statistics_for_all_accepted_reads 12905941 0 4095239 0 0 0 0 0 12905941 0 100.0 nan 0 0 0 0 0 0 0 0 nan nan 0 0 0 0 nan nan 0 0 0 0 12905941 GSE138391_M25_statistics_for_primary_reads 8810702 0 0 0 0 0 0 0 8810702 0 100.0 nan 0 0 0 0 0 0 0 0 nan nan 0 0 0 0 nan nan 0 0 0 0 8810702 GSE138391_M25_statistics_for_primary_unique_reads 7333863 0 0 0 0 0 0 0 7333863 0 100.0 nan 0 0 0 0 0 0 0 0 nan nan 0 0 0 0 nan nan 0 0 0 0 7333863 GSE138391_M26_statistics_for_all_accepted_reads 12569856 0 3747445 0 0 0 0 0 12569856 0 100.0 nan 0 0 0 0 0 0 0 0 nan nan 0 0 0 0 nan nan 0 0 0 0 12569856 GSE138391_M26_statistics_for_primary_reads 8822411 0 0 0 0 0 0 0 8822411 0 100.0 nan 0 0 0 0 0 0 0 0 nan nan 0 0 0 0 nan nan 0 0 0 0 8822411 GSE138391_M26_statistics_for_primary_unique_reads 7434063 0 0 0 0 0 0 0 7434063 0 100.0 nan 0 0 0 0 0 0 0 0 nan nan 0 0 0 0 nan nan 0 0 0 0 7434063 GSE138391_M27_statistics_for_all_accepted_reads 17538579 0 5039006 0 0 0 0 0 17538579 0 100.0 nan 0 0 0 0 0 0 0 0 nan nan 0 0 0 0 nan nan 0 0 0 0 17538579 GSE138391_M27_statistics_for_primary_reads 12499573 0 0 0 0 0 0 0 12499573 0 100.0 nan 0 0 0 0 0 0 0 0 nan nan 0 0 0 0 nan nan 0 0 0 0 12499573 GSE138391_M27_statistics_for_primary_unique_reads 10582057 0 0 0 0 0 0 0 10582057 0 100.0 nan 0 0 0 0 0 0 0 0 nan nan 0 0 0 0 nan nan 0 0 0 0 10582057 GSE138391_M28_statistics_for_all_accepted_reads 17166132 0 5807958 0 0 0 0 0 17166132 0 100.0 nan 0 0 0 0 0 0 0 0 nan nan 0 0 0 0 nan nan 0 0 0 0 17166132 GSE138391_M28_statistics_for_primary_reads 11358174 0 0 0 0 0 0 0 11358174 0 100.0 nan 0 0 0 0 0 0 0 0 nan nan 0 0 0 0 nan nan 0 0 0 0 11358174 GSE138391_M28_statistics_for_primary_unique_reads 9357513 0 0 0 0 0 0 0 9357513 0 100.0 nan 0 0 0 0 0 0 0 0 nan nan 0 0 0 0 nan nan 0 0 0 0 9357513 GSE138391_M29_statistics_for_all_accepted_reads 11877097 0 1750868 0 0 0 0 0 11877097 0 100.0 nan 0 0 0 0 0 0 0 0 nan nan 0 0 0 0 nan nan 0 0 0 0 11877097 GSE138391_M29_statistics_for_primary_reads 10126229 0 0 0 0 0 0 0 10126229 0 100.0 nan 0 0 0 0 0 0 0 0 nan nan 0 0 0 0 nan nan 0 0 0 0 10126229 GSE138391_M29_statistics_for_primary_unique_reads 9135643 0 0 0 0 0 0 0 9135643 0 100.0 nan 0 0 0 0 0 0 0 0 nan nan 0 0 0 0 nan nan 0 0 0 0 9135643 GSE138391_M2_statistics_for_all_accepted_reads 12229983 0 1791343 0 0 0 0 0 12229983 0 100.0 nan 0 0 0 0 0 0 0 0 nan nan 0 0 0 0 nan nan 0 0 0 0 12229983 GSE138391_M2_statistics_for_primary_reads 10438640 0 0 0 0 0 0 0 10438640 0 100.0 nan 0 0 0 0 0 0 0 0 nan nan 0 0 0 0 nan nan 0 0 0 0 10438640 GSE138391_M2_statistics_for_primary_unique_reads 9258389 0 0 0 0 0 0 0 9258389 0 100.0 nan 0 0 0 0 0 0 0 0 nan nan 0 0 0 0 nan nan 0 0 0 0 9258389 GSE138391_M30_statistics_for_all_accepted_reads 11371416 0 1677049 0 0 0 0 0 11371416 0 100.0 nan 0 0 0 0 0 0 0 0 nan nan 0 0 0 0 nan nan 0 0 0 0 11371416 GSE138391_M30_statistics_for_primary_reads 9694367 0 0 0 0 0 0 0 9694367 0 100.0 nan 0 0 0 0 0 0 0 0 nan nan 0 0 0 0 nan nan 0 0 0 0 9694367 GSE138391_M30_statistics_for_primary_unique_reads 8742302 0 0 0 0 0 0 0 8742302 0 100.0 nan 0 0 0 0 0 0 0 0 nan nan 0 0 0 0 nan nan 0 0 0 0 8742302 GSE138391_M31_statistics_for_all_accepted_reads 14104968 0 2258667 0 0 0 0 0 14104968 0 100.0 nan 0 0 0 0 0 0 0 0 nan nan 0 0 0 0 nan nan 0 0 0 0 14104968 GSE138391_M31_statistics_for_primary_reads 11846301 0 0 0 0 0 0 0 11846301 0 100.0 nan 0 0 0 0 0 0 0 0 nan nan 0 0 0 0 nan nan 0 0 0 0 11846301 GSE138391_M31_statistics_for_primary_unique_reads 10638087 0 0 0 0 0 0 0 10638087 0 100.0 nan 0 0 0 0 0 0 0 0 nan nan 0 0 0 0 nan nan 0 0 0 0 10638087 GSE138391_M32_statistics_for_all_accepted_reads 15148824 0 2447177 0 0 0 0 0 15148824 0 100.0 nan 0 0 0 0 0 0 0 0 nan nan 0 0 0 0 nan nan 0 0 0 0 15148824 GSE138391_M32_statistics_for_primary_reads 12701647 0 0 0 0 0 0 0 12701647 0 100.0 nan 0 0 0 0 0 0 0 0 nan nan 0 0 0 0 nan nan 0 0 0 0 12701647 GSE138391_M32_statistics_for_primary_unique_reads 11364472 0 0 0 0 0 0 0 11364472 0 100.0 nan 0 0 0 0 0 0 0 0 nan nan 0 0 0 0 nan nan 0 0 0 0 11364472 GSE138391_M3_statistics_for_all_accepted_reads 12507623 0 1760410 0 0 0 0 0 12507623 0 100.0 nan 0 0 0 0 0 0 0 0 nan nan 0 0 0 0 nan nan 0 0 0 0 12507623 GSE138391_M3_statistics_for_primary_reads 10747213 0 0 0 0 0 0 0 10747213 0 100.0 nan 0 0 0 0 0 0 0 0 nan nan 0 0 0 0 nan nan 0 0 0 0 10747213 GSE138391_M3_statistics_for_primary_unique_reads 9568483 0 0 0 0 0 0 0 9568483 0 100.0 nan 0 0 0 0 0 0 0 0 nan nan 0 0 0 0 nan nan 0 0 0 0 9568483 GSE138391_M4_statistics_for_all_accepted_reads 12987326 0 2013727 0 0 0 0 0 12987326 0 100.0 nan 0 0 0 0 0 0 0 0 nan nan 0 0 0 0 nan nan 0 0 0 0 12987326 GSE138391_M4_statistics_for_primary_reads 10973599 0 0 0 0 0 0 0 10973599 0 100.0 nan 0 0 0 0 0 0 0 0 nan nan 0 0 0 0 nan nan 0 0 0 0 10973599 GSE138391_M4_statistics_for_primary_unique_reads 9663246 0 0 0 0 0 0 0 9663246 0 100.0 nan 0 0 0 0 0 0 0 0 nan nan 0 0 0 0 nan nan 0 0 0 0 9663246 GSE138391_M5_statistics_for_all_accepted_reads 12401113 0 1678369 0 0 0 0 0 12401113 0 100.0 nan 0 0 0 0 0 0 0 0 nan nan 0 0 0 0 nan nan 0 0 0 0 12401113 GSE138391_M5_statistics_for_primary_reads 10722744 0 0 0 0 0 0 0 10722744 0 100.0 nan 0 0 0 0 0 0 0 0 nan nan 0 0 0 0 nan nan 0 0 0 0 10722744 GSE138391_M5_statistics_for_primary_unique_reads 9643290 0 0 0 0 0 0 0 9643290 0 100.0 nan 0 0 0 0 0 0 0 0 nan nan 0 0 0 0 nan nan 0 0 0 0 9643290 GSE138391_M6_statistics_for_all_accepted_reads 14673784 0 2070522 0 0 0 0 0 14673784 0 100.0 nan 0 0 0 0 0 0 0 0 nan nan 0 0 0 0 nan nan 0 0 0 0 14673784 GSE138391_M6_statistics_for_primary_reads 12603262 0 0 0 0 0 0 0 12603262 0 100.0 nan 0 0 0 0 0 0 0 0 nan nan 0 0 0 0 nan nan 0 0 0 0 12603262 GSE138391_M6_statistics_for_primary_unique_reads 11292283 0 0 0 0 0 0 0 11292283 0 100.0 nan 0 0 0 0 0 0 0 0 nan nan 0 0 0 0 nan nan 0 0 0 0 11292283 GSE138391_M7_statistics_for_all_accepted_reads 14086209 0 1946479 0 0 0 0 0 14086209 0 100.0 nan 0 0 0 0 0 0 0 0 nan nan 0 0 0 0 nan nan 0 0 0 0 14086209 GSE138391_M7_statistics_for_primary_reads 12139730 0 0 0 0 0 0 0 12139730 0 100.0 nan 0 0 0 0 0 0 0 0 nan nan 0 0 0 0 nan nan 0 0 0 0 12139730 GSE138391_M7_statistics_for_primary_unique_reads 10912419 0 0 0 0 0 0 0 10912419 0 100.0 nan 0 0 0 0 0 0 0 0 nan nan 0 0 0 0 nan nan 0 0 0 0 10912419 GSE138391_M8_statistics_for_all_accepted_reads 13912435 0 1937321 0 0 0 0 0 13912435 0 100.0 nan 0 0 0 0 0 0 0 0 nan nan 0 0 0 0 nan nan 0 0 0 0 13912435 GSE138391_M8_statistics_for_primary_reads 11975114 0 0 0 0 0 0 0 11975114 0 100.0 nan 0 0 0 0 0 0 0 0 nan nan 0 0 0 0 nan nan 0 0 0 0 11975114 GSE138391_M8_statistics_for_primary_unique_reads 10755386 0 0 0 0 0 0 0 10755386 0 100.0 nan 0 0 0 0 0 0 0 0 nan nan 0 0 0 0 nan nan 0 0 0 0 10755386 GSE138391_M9_statistics_for_all_accepted_reads 16052723 0 3280557 0 0 0 0 0 16052723 0 100.0 nan 0 0 0 0 0 0 0 0 nan nan 0 0 0 0 nan nan 0 0 0 0 16052723 GSE138391_M9_statistics_for_primary_reads 12772166 0 0 0 0 0 0 0 12772166 0 100.0 nan 0 0 0 0 0 0 0 0 nan nan 0 0 0 0 nan nan 0 0 0 0 12772166 GSE138391_M9_statistics_for_primary_unique_reads 11232535 0 0 0 0 0 0 0 11232535 0 100.0 nan 0 0 0 0 0 0 0 0 nan nan 0 0 0 0 nan nan 0 0 0 0 11232535