Sample total_passed total_failed secondary_passed secondary_failed supplementary_passed supplementary_failed duplicates_passed duplicates_failed mapped_passed mapped_failed mapped_passed_pct mapped_failed_pct paired in sequencing_passed paired in sequencing_failed read1_passed read1_failed read2_passed read2_failed properly paired_passed properly paired_failed properly paired_passed_pct properly paired_failed_pct with itself and mate mapped_passed with itself and mate mapped_failed singletons_passed singletons_failed singletons_passed_pct singletons_failed_pct with mate mapped to a different chr_passed with mate mapped to a different chr_failed with mate mapped to a different chr (mapQ >= 5)_passed with mate mapped to a different chr (mapQ >= 5)_failed flagstat_total GSE138392_M10_statistics_for_all_accepted_reads 3294813 0 969441 0 0 0 0 0 3294813 0 100.0 nan 0 0 0 0 0 0 0 0 nan nan 0 0 0 0 nan nan 0 0 0 0 3294813 GSE138392_M10_statistics_for_primary_reads 2325372 0 0 0 0 0 0 0 2325372 0 100.0 nan 0 0 0 0 0 0 0 0 nan nan 0 0 0 0 nan nan 0 0 0 0 2325372 GSE138392_M10_statistics_for_primary_unique_reads 1955036 0 0 0 0 0 0 0 1955036 0 100.0 nan 0 0 0 0 0 0 0 0 nan nan 0 0 0 0 nan nan 0 0 0 0 1955036 GSE138392_M11_statistics_for_all_accepted_reads 3135880 0 742739 0 0 0 0 0 3135880 0 100.0 nan 0 0 0 0 0 0 0 0 nan nan 0 0 0 0 nan nan 0 0 0 0 3135880 GSE138392_M11_statistics_for_primary_reads 2393141 0 0 0 0 0 0 0 2393141 0 100.0 nan 0 0 0 0 0 0 0 0 nan nan 0 0 0 0 nan nan 0 0 0 0 2393141 GSE138392_M11_statistics_for_primary_unique_reads 2051676 0 0 0 0 0 0 0 2051676 0 100.0 nan 0 0 0 0 0 0 0 0 nan nan 0 0 0 0 nan nan 0 0 0 0 2051676 GSE138392_M12_statistics_for_all_accepted_reads 3318714 0 768231 0 0 0 0 0 3318714 0 100.0 nan 0 0 0 0 0 0 0 0 nan nan 0 0 0 0 nan nan 0 0 0 0 3318714 GSE138392_M12_statistics_for_primary_reads 2550483 0 0 0 0 0 0 0 2550483 0 100.0 nan 0 0 0 0 0 0 0 0 nan nan 0 0 0 0 nan nan 0 0 0 0 2550483 GSE138392_M12_statistics_for_primary_unique_reads 2200550 0 0 0 0 0 0 0 2200550 0 100.0 nan 0 0 0 0 0 0 0 0 nan nan 0 0 0 0 nan nan 0 0 0 0 2200550 GSE138392_M13_statistics_for_all_accepted_reads 3336842 0 489370 0 0 0 0 0 3336842 0 100.0 nan 0 0 0 0 0 0 0 0 nan nan 0 0 0 0 nan nan 0 0 0 0 3336842 GSE138392_M13_statistics_for_primary_reads 2847472 0 0 0 0 0 0 0 2847472 0 100.0 nan 0 0 0 0 0 0 0 0 nan nan 0 0 0 0 nan nan 0 0 0 0 2847472 GSE138392_M13_statistics_for_primary_unique_reads 2572030 0 0 0 0 0 0 0 2572030 0 100.0 nan 0 0 0 0 0 0 0 0 nan nan 0 0 0 0 nan nan 0 0 0 0 2572030 GSE138392_M14_statistics_for_all_accepted_reads 2948752 0 433792 0 0 0 0 0 2948752 0 100.0 nan 0 0 0 0 0 0 0 0 nan nan 0 0 0 0 nan nan 0 0 0 0 2948752 GSE138392_M14_statistics_for_primary_reads 2514960 0 0 0 0 0 0 0 2514960 0 100.0 nan 0 0 0 0 0 0 0 0 nan nan 0 0 0 0 nan nan 0 0 0 0 2514960 GSE138392_M14_statistics_for_primary_unique_reads 2275205 0 0 0 0 0 0 0 2275205 0 100.0 nan 0 0 0 0 0 0 0 0 nan nan 0 0 0 0 nan nan 0 0 0 0 2275205 GSE138392_M15_statistics_for_all_accepted_reads 2809910 0 414812 0 0 0 0 0 2809910 0 100.0 nan 0 0 0 0 0 0 0 0 nan nan 0 0 0 0 nan nan 0 0 0 0 2809910 GSE138392_M15_statistics_for_primary_reads 2395098 0 0 0 0 0 0 0 2395098 0 100.0 nan 0 0 0 0 0 0 0 0 nan nan 0 0 0 0 nan nan 0 0 0 0 2395098 GSE138392_M15_statistics_for_primary_unique_reads 2160996 0 0 0 0 0 0 0 2160996 0 100.0 nan 0 0 0 0 0 0 0 0 nan nan 0 0 0 0 nan nan 0 0 0 0 2160996 GSE138392_M16_statistics_for_all_accepted_reads 2828567 0 408126 0 0 0 0 0 2828567 0 100.0 nan 0 0 0 0 0 0 0 0 nan nan 0 0 0 0 nan nan 0 0 0 0 2828567 GSE138392_M16_statistics_for_primary_reads 2420441 0 0 0 0 0 0 0 2420441 0 100.0 nan 0 0 0 0 0 0 0 0 nan nan 0 0 0 0 nan nan 0 0 0 0 2420441 GSE138392_M16_statistics_for_primary_unique_reads 2195913 0 0 0 0 0 0 0 2195913 0 100.0 nan 0 0 0 0 0 0 0 0 nan nan 0 0 0 0 nan nan 0 0 0 0 2195913 GSE138392_M17_statistics_for_all_accepted_reads 3167264 0 433289 0 0 0 0 0 3167264 0 100.0 nan 0 0 0 0 0 0 0 0 nan nan 0 0 0 0 nan nan 0 0 0 0 3167264 GSE138392_M17_statistics_for_primary_reads 2733975 0 0 0 0 0 0 0 2733975 0 100.0 nan 0 0 0 0 0 0 0 0 nan nan 0 0 0 0 nan nan 0 0 0 0 2733975 GSE138392_M17_statistics_for_primary_unique_reads 2479673 0 0 0 0 0 0 0 2479673 0 100.0 nan 0 0 0 0 0 0 0 0 nan nan 0 0 0 0 nan nan 0 0 0 0 2479673 GSE138392_M18_statistics_for_all_accepted_reads 2986768 0 409503 0 0 0 0 0 2986768 0 100.0 nan 0 0 0 0 0 0 0 0 nan nan 0 0 0 0 nan nan 0 0 0 0 2986768 GSE138392_M18_statistics_for_primary_reads 2577265 0 0 0 0 0 0 0 2577265 0 100.0 nan 0 0 0 0 0 0 0 0 nan nan 0 0 0 0 nan nan 0 0 0 0 2577265 GSE138392_M18_statistics_for_primary_unique_reads 2341234 0 0 0 0 0 0 0 2341234 0 100.0 nan 0 0 0 0 0 0 0 0 nan nan 0 0 0 0 nan nan 0 0 0 0 2341234 GSE138392_M19_statistics_for_all_accepted_reads 2502767 0 345939 0 0 0 0 0 2502767 0 100.0 nan 0 0 0 0 0 0 0 0 nan nan 0 0 0 0 nan nan 0 0 0 0 2502767 GSE138392_M19_statistics_for_primary_reads 2156828 0 0 0 0 0 0 0 2156828 0 100.0 nan 0 0 0 0 0 0 0 0 nan nan 0 0 0 0 nan nan 0 0 0 0 2156828 GSE138392_M19_statistics_for_primary_unique_reads 1947488 0 0 0 0 0 0 0 1947488 0 100.0 nan 0 0 0 0 0 0 0 0 nan nan 0 0 0 0 nan nan 0 0 0 0 1947488 GSE138392_M1_statistics_for_all_accepted_reads 3077776 0 468587 0 0 0 0 0 3077776 0 100.0 nan 0 0 0 0 0 0 0 0 nan nan 0 0 0 0 nan nan 0 0 0 0 3077776 GSE138392_M1_statistics_for_primary_reads 2609189 0 0 0 0 0 0 0 2609189 0 100.0 nan 0 0 0 0 0 0 0 0 nan nan 0 0 0 0 nan nan 0 0 0 0 2609189 GSE138392_M1_statistics_for_primary_unique_reads 2319968 0 0 0 0 0 0 0 2319968 0 100.0 nan 0 0 0 0 0 0 0 0 nan nan 0 0 0 0 nan nan 0 0 0 0 2319968 GSE138392_M20_statistics_for_all_accepted_reads 2960849 0 441784 0 0 0 0 0 2960849 0 100.0 nan 0 0 0 0 0 0 0 0 nan nan 0 0 0 0 nan nan 0 0 0 0 2960849 GSE138392_M20_statistics_for_primary_reads 2519065 0 0 0 0 0 0 0 2519065 0 100.0 nan 0 0 0 0 0 0 0 0 nan nan 0 0 0 0 nan nan 0 0 0 0 2519065 GSE138392_M20_statistics_for_primary_unique_reads 2262161 0 0 0 0 0 0 0 2262161 0 100.0 nan 0 0 0 0 0 0 0 0 nan nan 0 0 0 0 nan nan 0 0 0 0 2262161 GSE138392_M21_statistics_for_all_accepted_reads 2463186 0 325740 0 0 0 0 0 2463186 0 100.0 nan 0 0 0 0 0 0 0 0 nan nan 0 0 0 0 nan nan 0 0 0 0 2463186 GSE138392_M21_statistics_for_primary_reads 2137446 0 0 0 0 0 0 0 2137446 0 100.0 nan 0 0 0 0 0 0 0 0 nan nan 0 0 0 0 nan nan 0 0 0 0 2137446 GSE138392_M21_statistics_for_primary_unique_reads 1960797 0 0 0 0 0 0 0 1960797 0 100.0 nan 0 0 0 0 0 0 0 0 nan nan 0 0 0 0 nan nan 0 0 0 0 1960797 GSE138392_M22_statistics_for_all_accepted_reads 3446800 0 498949 0 0 0 0 0 3446800 0 100.0 nan 0 0 0 0 0 0 0 0 nan nan 0 0 0 0 nan nan 0 0 0 0 3446800 GSE138392_M22_statistics_for_primary_reads 2947851 0 0 0 0 0 0 0 2947851 0 100.0 nan 0 0 0 0 0 0 0 0 nan nan 0 0 0 0 nan nan 0 0 0 0 2947851 GSE138392_M22_statistics_for_primary_unique_reads 2673745 0 0 0 0 0 0 0 2673745 0 100.0 nan 0 0 0 0 0 0 0 0 nan nan 0 0 0 0 nan nan 0 0 0 0 2673745 GSE138392_M23_statistics_for_all_accepted_reads 3053046 0 408832 0 0 0 0 0 3053046 0 100.0 nan 0 0 0 0 0 0 0 0 nan nan 0 0 0 0 nan nan 0 0 0 0 3053046 GSE138392_M23_statistics_for_primary_reads 2644214 0 0 0 0 0 0 0 2644214 0 100.0 nan 0 0 0 0 0 0 0 0 nan nan 0 0 0 0 nan nan 0 0 0 0 2644214 GSE138392_M23_statistics_for_primary_unique_reads 2420277 0 0 0 0 0 0 0 2420277 0 100.0 nan 0 0 0 0 0 0 0 0 nan nan 0 0 0 0 nan nan 0 0 0 0 2420277 GSE138392_M24_statistics_for_all_accepted_reads 2884172 0 372906 0 0 0 0 0 2884172 0 100.0 nan 0 0 0 0 0 0 0 0 nan nan 0 0 0 0 nan nan 0 0 0 0 2884172 GSE138392_M24_statistics_for_primary_reads 2511266 0 0 0 0 0 0 0 2511266 0 100.0 nan 0 0 0 0 0 0 0 0 nan nan 0 0 0 0 nan nan 0 0 0 0 2511266 GSE138392_M24_statistics_for_primary_unique_reads 2303424 0 0 0 0 0 0 0 2303424 0 100.0 nan 0 0 0 0 0 0 0 0 nan nan 0 0 0 0 nan nan 0 0 0 0 2303424 GSE138392_M25_statistics_for_all_accepted_reads 3051298 0 505226 0 0 0 0 0 3051298 0 100.0 nan 0 0 0 0 0 0 0 0 nan nan 0 0 0 0 nan nan 0 0 0 0 3051298 GSE138392_M25_statistics_for_primary_reads 2546072 0 0 0 0 0 0 0 2546072 0 100.0 nan 0 0 0 0 0 0 0 0 nan nan 0 0 0 0 nan nan 0 0 0 0 2546072 GSE138392_M25_statistics_for_primary_unique_reads 2268918 0 0 0 0 0 0 0 2268918 0 100.0 nan 0 0 0 0 0 0 0 0 nan nan 0 0 0 0 nan nan 0 0 0 0 2268918 GSE138392_M26_statistics_for_all_accepted_reads 3008150 0 531901 0 0 0 0 0 3008150 0 100.0 nan 0 0 0 0 0 0 0 0 nan nan 0 0 0 0 nan nan 0 0 0 0 3008150 GSE138392_M26_statistics_for_primary_reads 2476249 0 0 0 0 0 0 0 2476249 0 100.0 nan 0 0 0 0 0 0 0 0 nan nan 0 0 0 0 nan nan 0 0 0 0 2476249 GSE138392_M26_statistics_for_primary_unique_reads 2205717 0 0 0 0 0 0 0 2205717 0 100.0 nan 0 0 0 0 0 0 0 0 nan nan 0 0 0 0 nan nan 0 0 0 0 2205717 GSE138392_M27_statistics_for_all_accepted_reads 3329359 0 581337 0 0 0 0 0 3329359 0 100.0 nan 0 0 0 0 0 0 0 0 nan nan 0 0 0 0 nan nan 0 0 0 0 3329359 GSE138392_M27_statistics_for_primary_reads 2748022 0 0 0 0 0 0 0 2748022 0 100.0 nan 0 0 0 0 0 0 0 0 nan nan 0 0 0 0 nan nan 0 0 0 0 2748022 GSE138392_M27_statistics_for_primary_unique_reads 2447145 0 0 0 0 0 0 0 2447145 0 100.0 nan 0 0 0 0 0 0 0 0 nan nan 0 0 0 0 nan nan 0 0 0 0 2447145 GSE138392_M28_statistics_for_all_accepted_reads 2494896 0 387800 0 0 0 0 0 2494896 0 100.0 nan 0 0 0 0 0 0 0 0 nan nan 0 0 0 0 nan nan 0 0 0 0 2494896 GSE138392_M28_statistics_for_primary_reads 2107096 0 0 0 0 0 0 0 2107096 0 100.0 nan 0 0 0 0 0 0 0 0 nan nan 0 0 0 0 nan nan 0 0 0 0 2107096 GSE138392_M28_statistics_for_primary_unique_reads 1891964 0 0 0 0 0 0 0 1891964 0 100.0 nan 0 0 0 0 0 0 0 0 nan nan 0 0 0 0 nan nan 0 0 0 0 1891964 GSE138392_M29_statistics_for_all_accepted_reads 2386840 0 310431 0 0 0 0 0 2386840 0 100.0 nan 0 0 0 0 0 0 0 0 nan nan 0 0 0 0 nan nan 0 0 0 0 2386840 GSE138392_M29_statistics_for_primary_reads 2076409 0 0 0 0 0 0 0 2076409 0 100.0 nan 0 0 0 0 0 0 0 0 nan nan 0 0 0 0 nan nan 0 0 0 0 2076409 GSE138392_M29_statistics_for_primary_unique_reads 1897616 0 0 0 0 0 0 0 1897616 0 100.0 nan 0 0 0 0 0 0 0 0 nan nan 0 0 0 0 nan nan 0 0 0 0 1897616 GSE138392_M2_statistics_for_all_accepted_reads 3183245 0 552524 0 0 0 0 0 3183245 0 100.0 nan 0 0 0 0 0 0 0 0 nan nan 0 0 0 0 nan nan 0 0 0 0 3183245 GSE138392_M2_statistics_for_primary_reads 2630721 0 0 0 0 0 0 0 2630721 0 100.0 nan 0 0 0 0 0 0 0 0 nan nan 0 0 0 0 nan nan 0 0 0 0 2630721 GSE138392_M2_statistics_for_primary_unique_reads 2322800 0 0 0 0 0 0 0 2322800 0 100.0 nan 0 0 0 0 0 0 0 0 nan nan 0 0 0 0 nan nan 0 0 0 0 2322800 GSE138392_M30_statistics_for_all_accepted_reads 2567868 0 332479 0 0 0 0 0 2567868 0 100.0 nan 0 0 0 0 0 0 0 0 nan nan 0 0 0 0 nan nan 0 0 0 0 2567868 GSE138392_M30_statistics_for_primary_reads 2235389 0 0 0 0 0 0 0 2235389 0 100.0 nan 0 0 0 0 0 0 0 0 nan nan 0 0 0 0 nan nan 0 0 0 0 2235389 GSE138392_M30_statistics_for_primary_unique_reads 2051501 0 0 0 0 0 0 0 2051501 0 100.0 nan 0 0 0 0 0 0 0 0 nan nan 0 0 0 0 nan nan 0 0 0 0 2051501 GSE138392_M31_statistics_for_all_accepted_reads 2543801 0 314849 0 0 0 0 0 2543801 0 100.0 nan 0 0 0 0 0 0 0 0 nan nan 0 0 0 0 nan nan 0 0 0 0 2543801 GSE138392_M31_statistics_for_primary_reads 2228952 0 0 0 0 0 0 0 2228952 0 100.0 nan 0 0 0 0 0 0 0 0 nan nan 0 0 0 0 nan nan 0 0 0 0 2228952 GSE138392_M31_statistics_for_primary_unique_reads 2049615 0 0 0 0 0 0 0 2049615 0 100.0 nan 0 0 0 0 0 0 0 0 nan nan 0 0 0 0 nan nan 0 0 0 0 2049615 GSE138392_M32_statistics_for_all_accepted_reads 2561731 0 327199 0 0 0 0 0 2561731 0 100.0 nan 0 0 0 0 0 0 0 0 nan nan 0 0 0 0 nan nan 0 0 0 0 2561731 GSE138392_M32_statistics_for_primary_reads 2234532 0 0 0 0 0 0 0 2234532 0 100.0 nan 0 0 0 0 0 0 0 0 nan nan 0 0 0 0 nan nan 0 0 0 0 2234532 GSE138392_M32_statistics_for_primary_unique_reads 2048643 0 0 0 0 0 0 0 2048643 0 100.0 nan 0 0 0 0 0 0 0 0 nan nan 0 0 0 0 nan nan 0 0 0 0 2048643 GSE138392_M3_statistics_for_all_accepted_reads 2900005 0 515715 0 0 0 0 0 2900005 0 100.0 nan 0 0 0 0 0 0 0 0 nan nan 0 0 0 0 nan nan 0 0 0 0 2900005 GSE138392_M3_statistics_for_primary_reads 2384290 0 0 0 0 0 0 0 2384290 0 100.0 nan 0 0 0 0 0 0 0 0 nan nan 0 0 0 0 nan nan 0 0 0 0 2384290 GSE138392_M3_statistics_for_primary_unique_reads 2105452 0 0 0 0 0 0 0 2105452 0 100.0 nan 0 0 0 0 0 0 0 0 nan nan 0 0 0 0 nan nan 0 0 0 0 2105452 GSE138392_M4_statistics_for_all_accepted_reads 2934918 0 487230 0 0 0 0 0 2934918 0 100.0 nan 0 0 0 0 0 0 0 0 nan nan 0 0 0 0 nan nan 0 0 0 0 2934918 GSE138392_M4_statistics_for_primary_reads 2447688 0 0 0 0 0 0 0 2447688 0 100.0 nan 0 0 0 0 0 0 0 0 nan nan 0 0 0 0 nan nan 0 0 0 0 2447688 GSE138392_M4_statistics_for_primary_unique_reads 2161452 0 0 0 0 0 0 0 2161452 0 100.0 nan 0 0 0 0 0 0 0 0 nan nan 0 0 0 0 nan nan 0 0 0 0 2161452 GSE138392_M5_statistics_for_all_accepted_reads 3051474 0 441571 0 0 0 0 0 3051474 0 100.0 nan 0 0 0 0 0 0 0 0 nan nan 0 0 0 0 nan nan 0 0 0 0 3051474 GSE138392_M5_statistics_for_primary_reads 2609903 0 0 0 0 0 0 0 2609903 0 100.0 nan 0 0 0 0 0 0 0 0 nan nan 0 0 0 0 nan nan 0 0 0 0 2609903 GSE138392_M5_statistics_for_primary_unique_reads 2366110 0 0 0 0 0 0 0 2366110 0 100.0 nan 0 0 0 0 0 0 0 0 nan nan 0 0 0 0 nan nan 0 0 0 0 2366110 GSE138392_M6_statistics_for_all_accepted_reads 2808873 0 394402 0 0 0 0 0 2808873 0 100.0 nan 0 0 0 0 0 0 0 0 nan nan 0 0 0 0 nan nan 0 0 0 0 2808873 GSE138392_M6_statistics_for_primary_reads 2414471 0 0 0 0 0 0 0 2414471 0 100.0 nan 0 0 0 0 0 0 0 0 nan nan 0 0 0 0 nan nan 0 0 0 0 2414471 GSE138392_M6_statistics_for_primary_unique_reads 2195852 0 0 0 0 0 0 0 2195852 0 100.0 nan 0 0 0 0 0 0 0 0 nan nan 0 0 0 0 nan nan 0 0 0 0 2195852 GSE138392_M7_statistics_for_all_accepted_reads 2891658 0 396576 0 0 0 0 0 2891658 0 100.0 nan 0 0 0 0 0 0 0 0 nan nan 0 0 0 0 nan nan 0 0 0 0 2891658 GSE138392_M7_statistics_for_primary_reads 2495082 0 0 0 0 0 0 0 2495082 0 100.0 nan 0 0 0 0 0 0 0 0 nan nan 0 0 0 0 nan nan 0 0 0 0 2495082 GSE138392_M7_statistics_for_primary_unique_reads 2262483 0 0 0 0 0 0 0 2262483 0 100.0 nan 0 0 0 0 0 0 0 0 nan nan 0 0 0 0 nan nan 0 0 0 0 2262483 GSE138392_M8_statistics_for_all_accepted_reads 2924701 0 414834 0 0 0 0 0 2924701 0 100.0 nan 0 0 0 0 0 0 0 0 nan nan 0 0 0 0 nan nan 0 0 0 0 2924701 GSE138392_M8_statistics_for_primary_reads 2509867 0 0 0 0 0 0 0 2509867 0 100.0 nan 0 0 0 0 0 0 0 0 nan nan 0 0 0 0 nan nan 0 0 0 0 2509867 GSE138392_M8_statistics_for_primary_unique_reads 2273637 0 0 0 0 0 0 0 2273637 0 100.0 nan 0 0 0 0 0 0 0 0 nan nan 0 0 0 0 nan nan 0 0 0 0 2273637 GSE138392_M9_statistics_for_all_accepted_reads 3228175 0 767976 0 0 0 0 0 3228175 0 100.0 nan 0 0 0 0 0 0 0 0 nan nan 0 0 0 0 nan nan 0 0 0 0 3228175 GSE138392_M9_statistics_for_primary_reads 2460199 0 0 0 0 0 0 0 2460199 0 100.0 nan 0 0 0 0 0 0 0 0 nan nan 0 0 0 0 nan nan 0 0 0 0 2460199 GSE138392_M9_statistics_for_primary_unique_reads 2115605 0 0 0 0 0 0 0 2115605 0 100.0 nan 0 0 0 0 0 0 0 0 nan nan 0 0 0 0 nan nan 0 0 0 0 2115605