Sample STAR_mqc-generalstats-star-uniquely_mapped_percent STAR_mqc-generalstats-star-uniquely_mapped featureCounts_mqc-generalstats-featurecounts-percent_assigned featureCounts_mqc-generalstats-featurecounts-Assigned Samtools_mqc-generalstats-samtools-flagstat_total Samtools_mqc-generalstats-samtools-mapped_passed fastp_mqc-generalstats-fastp-pct_duplication fastp_mqc-generalstats-fastp-after_filtering_q30_rate fastp_mqc-generalstats-fastp-after_filtering_q30_bases fastp_mqc-generalstats-fastp-after_filtering_gc_content fastp_mqc-generalstats-fastp-pct_surviving fastp_mqc-generalstats-fastp-pct_adapter FastQC_mqc-generalstats-fastqc-percent_duplicates FastQC_mqc-generalstats-fastqc-percent_gc FastQC_mqc-generalstats-fastqc-avg_sequence_length FastQC_mqc-generalstats-fastqc-percent_fails FastQC_mqc-generalstats-fastqc-total_sequences KC14001Luc_M07_KC14001Luc_M07 91.83 36900853.0 KC14001Luc_M07_sorted 89.20218456738655 32916367 KC14001Luc_M07_statistics_for_all_accepted_reads 84875120 84875120 KC14001Luc_M07_statistics_for_primary_reads 78740428 78740428 KC14001Luc_M07_statistics_for_primary_unique_reads 73801706 73801706 KC14002Luc_M08_KC14002Luc_M08 92.01 39207970.0 KC14002Luc_M08_sorted 89.52276794743518 35100060 KC14002Luc_M08_statistics_for_all_accepted_reads 89753788 89753788 KC14002Luc_M08_statistics_for_primary_reads 83467050 83467050 KC14002Luc_M08_statistics_for_primary_unique_reads 78415940 78415940 KC14005Luc_M09_KC14005Luc_M09 91.97 39654618.0 KC14005Luc_M09_sorted 90.04103633024532 35705429 KC14005Luc_M09_statistics_for_all_accepted_reads 90857452 90857452 KC14005Luc_M09_statistics_for_primary_reads 84415184 84415184 KC14005Luc_M09_statistics_for_primary_unique_reads 79309236 79309236 KC14007GHR_M10_KC14007GHR_M10 91.47 40056418.0 KC14007GHR_M10_sorted 88.92900508477818 35621774 KC14007GHR_M10_statistics_for_all_accepted_reads 91403406 91403406 KC14007GHR_M10_statistics_for_primary_reads 85119316 85119316 KC14007GHR_M10_statistics_for_primary_unique_reads 80112836 80112836 KC14008GHR_M11_KC14008GHR_M11 91.62 42359411.0 KC14008GHR_M11_sorted 89.71514972198268 38002809 KC14008GHR_M11_statistics_for_all_accepted_reads 96545522 96545522 KC14008GHR_M11_statistics_for_primary_reads 89876814 89876814 KC14008GHR_M11_statistics_for_primary_unique_reads 84718822 84718822 KC14012GHR_M12_KC14012GHR_M12 92.39 40070752.0 KC14012GHR_M12_sorted 89.6850974995428 35937493 KC14012GHR_M12_statistics_for_all_accepted_reads 90133292 90133292 KC14012GHR_M12_statistics_for_primary_reads 84522762 84522762 KC14012GHR_M12_statistics_for_primary_unique_reads 80141504 80141504 KC14015Luc_M19_KC14015Luc_M19 91.98 42645016.0 KC14015Luc_M19_sorted 89.55394928213886 38190296 KC14015Luc_M19_statistics_for_all_accepted_reads 96936340 96936340 KC14015Luc_M19_statistics_for_primary_reads 90440684 90440684 KC14015Luc_M19_statistics_for_primary_unique_reads 85290032 85290032 KC14016Luc_M20_KC14016Luc_M20 91.94 38359150.0 KC14016Luc_M20_sorted 90.34697067062226 34656330 KC14016Luc_M20_statistics_for_all_accepted_reads 87495596 87495596 KC14016Luc_M20_statistics_for_primary_reads 81463308 81463308 KC14016Luc_M20_statistics_for_primary_unique_reads 76718300 76718300 KC14017Luc_M21_KC14017Luc_M21 91.9 47209030.0 KC14017Luc_M21_sorted 90.06181656348372 42517310 KC14017Luc_M21_statistics_for_all_accepted_reads 107798798 107798798 KC14017Luc_M21_statistics_for_primary_reads 100410980 100410980 KC14017Luc_M21_statistics_for_primary_unique_reads 94418060 94418060 KC14019GHR_M22_KC14019GHR_M22 91.6 52848194.0 KC14019GHR_M22_sorted 89.67706446127563 47392709 KC14019GHR_M22_statistics_for_all_accepted_reads 121263852 121263852 KC14019GHR_M22_statistics_for_primary_reads 112687976 112687976 KC14019GHR_M22_statistics_for_primary_unique_reads 105696388 105696388 KC14022GHR_M23_KC14022GHR_M23 91.16 47952927.0 KC14022GHR_M23_sorted 89.74507020186692 43035388 KC14022GHR_M23_statistics_for_all_accepted_reads 110127544 110127544 KC14022GHR_M23_statistics_for_primary_reads 102217282 102217282 KC14022GHR_M23_statistics_for_primary_unique_reads 95905854 95905854 KC14024GHR_M24_KC14024GHR_M24 91.73 47610197.0 KC14024GHR_M24_sorted 90.49161044219161 43083234 KC14024GHR_M24_statistics_for_all_accepted_reads 107876312 107876312 KC14024GHR_M24_statistics_for_primary_reads 100818914 100818914 KC14024GHR_M24_statistics_for_primary_unique_reads 95220394 95220394 KC14101WT_M01_KC14101WT_M01 85.76 37070577.0 KC14101WT_M01_sorted 91.08719025333757 33766547 KC14101WT_M01_statistics_for_all_accepted_reads 84425630 84425630 KC14101WT_M01_statistics_for_primary_reads 78420126 78420126 KC14101WT_M01_statistics_for_primary_unique_reads 74141154 74141154 KC14102WT_M02_KC14102WT_M02 82.78 35787269.0 KC14102WT_M02_sorted 89.26386643250146 31945100 KC14102WT_M02_statistics_for_all_accepted_reads 83324826 83324826 KC14102WT_M02_statistics_for_primary_reads 76600236 76600236 KC14102WT_M02_statistics_for_primary_unique_reads 71574538 71574538 KC14103WT_M03_KC14103WT_M03 82.27 37552527.0 KC14103WT_M03_sorted 88.93547696537173 33397519 KC14103WT_M03_statistics_for_all_accepted_reads 87802786 87802786 KC14103WT_M03_statistics_for_primary_reads 80572170 80572170 KC14103WT_M03_statistics_for_primary_unique_reads 75105054 75105054 KC14113KO_M04_KC14113KO_M04 91.77 39728682.0 KC14113KO_M04_sorted 88.3907701745555 35116488 KC14113KO_M04_statistics_for_all_accepted_reads 90720942 90720942 KC14113KO_M04_statistics_for_primary_reads 84566514 84566514 KC14113KO_M04_statistics_for_primary_unique_reads 79457364 79457364 KC14114KO_M05_KC14114KO_M05 88.98 41876278.0 KC14114KO_M05_sorted 86.02409220800378 36023688 KC14114KO_M05_statistics_for_all_accepted_reads 100159794 100159794 KC14114KO_M05_statistics_for_primary_reads 91362996 91362996 KC14114KO_M05_statistics_for_primary_unique_reads 83752556 83752556 KC14119WT_M13_KC14119WT_M13 91.82 53121823.0 KC14119WT_M13_sorted 90.39384811775003 48018860 KC14119WT_M13_statistics_for_all_accepted_reads 121040560 121040560 KC14119WT_M13_statistics_for_primary_reads 112644328 112644328 KC14119WT_M13_statistics_for_primary_unique_reads 106243646 106243646 KC14120WT_M14_KC14120WT_M14 91.31 45881324.0 KC14120WT_M14_sorted 90.57724227836145 41558038 KC14120WT_M14_statistics_for_all_accepted_reads 104986322 104986322 KC14120WT_M14_statistics_for_primary_reads 97553894 97553894 KC14120WT_M14_statistics_for_primary_unique_reads 91762648 91762648 KC14121WT_M15_KC14121WT_M15 91.17 46018874.0 KC14121WT_M15_sorted 90.24047394119205 41527650 KC14121WT_M15_statistics_for_all_accepted_reads 104481502 104481502 KC14121WT_M15_statistics_for_primary_reads 97474204 97474204 KC14121WT_M15_statistics_for_primary_unique_reads 92037748 92037748 KC14131KO_M16_KC14131KO_M16 91.81 40662076.0 KC14131KO_M16_sorted 89.31502661103679 36317344 KC14131KO_M16_statistics_for_all_accepted_reads 92611892 92611892 KC14131KO_M16_statistics_for_primary_reads 86355720 86355720 KC14131KO_M16_statistics_for_primary_unique_reads 81324152 81324152 KC14132KO_M17_KC14132KO_M17 92.05 40389187.0 KC14132KO_M17_sorted 89.12594848715327 35997246 KC14132KO_M17_statistics_for_all_accepted_reads 91560784 91560784 KC14132KO_M17_statistics_for_primary_reads 85559730 85559730 KC14132KO_M17_statistics_for_primary_unique_reads 80778374 80778374 KC14134KO_M18_KC14134KO_M18 91.36 50003161.0 KC14134KO_M18_sorted 88.59604295816419 44300822 KC14134KO_M18_statistics_for_all_accepted_reads 114792832 114792832 KC14134KO_M18_statistics_for_primary_reads 106666848 106666848 KC14134KO_M18_statistics_for_primary_unique_reads 100006322 100006322 KC14136KO_M06_KC14136KO_M06 91.67 39524016.0 KC14136KO_M06_sorted 89.94677818165037 35550579 KC14136KO_M06_statistics_for_all_accepted_reads 90127174 90127174 KC14136KO_M06_statistics_for_primary_reads 83986458 83986458 KC14136KO_M06_statistics_for_primary_unique_reads 79048032 79048032 KC14_001_Luc_1 36.6668 0.944681 11313254663.0 0.496971 99.56913223463484 1.9157782608579883 78.92228354035686 49.0 150.0 18.181818181818183 40185183.0 KC14_001_Luc_2 80.47485044505828 49.0 150.0 9.090909090909092 40185183.0 KC14_002_Luc_1 37.160399999999996 0.94314 11976305159.0 0.49519 99.526904128685 1.5118951022652003 78.45638437092535 49.0 150.0 18.181818181818183 42611025.0 KC14_002_Luc_2 80.00811799312368 49.0 150.0 9.090909090909092 42611025.0 KC14_005_Luc_1 39.0211 0.948928 12189707782.0 0.500579 99.59954151275694 2.34920554367939 79.94523529985415 49.0 150.0 18.181818181818183 43114831.0 KC14_005_Luc_2 81.76801951746357 50.0 150.0 9.090909090909092 43114831.0 KC14_007_GHR_1 37.024699999999996 0.945175 12322369602.0 0.501306 99.53976251629832 2.4916427996082375 78.79249118537575 49.0 150.0 18.181818181818183 43789784.0 KC14_007_GHR_2 80.94167123504747 50.0 150.0 9.090909090909092 43789784.0 KC14_008_GHR_1 37.0611 0.946849 13034440927.0 0.501065 99.58833902293813 2.7894741680406256 79.22273495169158 49.0 150.0 18.181818181818183 46231975.0 KC14_008_GHR_2 81.03824950057353 50.0 150.0 9.090909090909092 46231975.0 KC14_012_GHR_1 36.7139 0.946791 12225169002.0 0.497602 99.53731620852032 2.4483319870850546 77.24505794587253 49.0 150.0 18.181818181818183 43372386.0 KC14_012_GHR_2 79.2022548155317 50.0 150.0 9.090909090909092 43372386.0 KC14_015_Luc_1 35.326299999999996 0.941752 12981532758.0 0.494679 99.50358058031284 2.8322713821040004 76.64740047716828 49.0 150.0 18.181818181818183 46361200.0 KC14_015_Luc_2 77.35195144393776 49.0 150.0 9.090909090909092 46361200.0 KC14_016_Luc_1 35.1623 0.941876 11680934973.0 0.496566 99.48606439318452 2.9208828642553244 76.71232275741167 49.0 150.0 18.181818181818183 41723515.0 KC14_016_Luc_2 77.58504516934067 49.0 150.0 9.090909090909092 41723515.0 KC14_017_Luc_1 37.4237 0.942766 14410144980.0 0.494789 99.53118119010796 2.65597350115788 79.18316725681292 49.0 150.0 18.181818181818183 51368886.0 KC14_017_Luc_2 79.79012715432765 49.0 150.0 9.090909090909092 51368886.0 KC14_019_GHR_1 38.0381 0.940307 16135233337.0 0.492498 99.5273782604746 2.9051754677776946 79.66684572813895 49.0 150.0 18.181818181818183 57694553.0 KC14_019_GHR_2 79.82866428686059 49.0 150.0 9.090909090909092 57694553.0 KC14_022_GHR_1 33.4918 0.937294 14637136674.0 0.493714 99.39993092131007 3.139147213706727 77.49497740015684 49.0 150.0 18.181818181818183 52603777.0 KC14_022_GHR_2 77.42370086716518 49.0 150.0 9.090909090909092 52603777.0 KC14_024_GHR_1 36.0911 0.945085 14566097478.0 0.496399 99.50832378319033 3.6329296958866713 77.76672300878597 49.0 150.0 18.181818181818183 51900619.0 KC14_024_GHR_2 78.7396253329279 49.0 150.0 9.090909090909092 51900619.0 KC14_101_WT_1 39.6262 0.946763 12193929865.0 0.49371 99.57436600442952 2.1030683197226256 79.32033461510562 49.0 150.0 18.181818181818183 43228220.0 KC14_101_WT_2 81.01010088633166 49.0 150.0 9.090909090909092 43228220.0 KC14_102_WT_1 39.7836 0.947044 12204676028.0 0.487277 99.61963238887644 2.1470375100135697 79.70400833083005 48.0 150.0 18.181818181818183 43231336.0 KC14_102_WT_2 81.34920822392739 48.0 150.0 9.090909090909092 43231336.0 KC14_103_WT_1 40.4224 0.946576 12878181189.0 0.48718 99.63027628153974 2.367059024459632 80.22120182568393 48.0 150.0 18.181818181818183 45646517.0 KC14_103_WT_2 81.6634829029718 48.0 150.0 9.090909090909092 45646517.0 KC14_113_KO_1 35.857 0.946648 12211828853.0 0.496845 99.56393452589502 1.9573341730197518 77.15879921017368 49.0 150.0 18.181818181818183 43292352.0 KC14_113_KO_2 78.8614654495129 49.0 150.0 9.090909090909092 43292352.0 KC14_114_KO_1 40.2754 0.935716 13107841386.0 0.488806 99.4788720749543 2.186045939398568 81.07759261755119 48.0 150.0 18.181818181818183 47061957.0 KC14_114_KO_2 81.38565723411128 49.0 150.0 9.090909090909092 47061957.0 KC14_119_WT_1 39.4877 0.943697 16223807329.0 0.498402 99.50561718667585 3.2703129337266574 79.93131779967361 49.0 150.0 18.181818181818183 57852537.0 KC14_119_WT_2 80.60637566116293 50.0 150.0 9.090909090909092 57852537.0 KC14_120_WT_1 39.2442 0.945188 14113897763.0 0.495722 99.5123121402905 3.147166442706567 82.15107665388548 49.0 150.0 18.181818181818183 50248534.0 KC14_120_WT_2 82.63090106455188 49.0 150.0 9.090909090909092 50248534.0 KC14_121_WT_1 37.877300000000005 0.942152 14128300648.0 0.498542 99.49043779689661 3.3353057929892036 79.57270335509637 49.0 150.0 18.181818181818183 50478430.0 KC14_121_WT_2 79.93766365911986 50.0 150.0 9.090909090909092 50478430.0 KC14_131_KO_1 35.998599999999996 0.942093 12401669542.0 0.494761 99.52630070080275 3.230250933035008 77.64399157963493 49.0 150.0 18.181818181818183 44289067.0 KC14_131_KO_2 78.50646067667601 49.0 150.0 9.090909090909092 44289067.0 KC14_132_KO_1 41.2159 0.952229 12421232382.0 0.500983 99.64672759306978 4.03859507825695 83.7377645816203 49.0 150.0 18.181818181818183 43879170.0 KC14_132_KO_2 83.4476095503611 50.0 150.0 9.090909090909092 43879170.0 KC14_134_KO_1 42.919000000000004 0.950929 15481781389.0 0.49903 99.60636122280951 3.4779123091501156 84.72184885109725 49.0 150.0 18.181818181818183 54734445.0 KC14_134_KO_2 84.11537133166152 50.0 150.0 9.090909090909092 54734445.0 KC14_136_KO_1 35.1907 0.939373 12059172548.0 0.494793 99.55105483188701 2.551669479908877 77.82974107735049 49.0 150.0 18.181818181818183 43115733.0 KC14_136_KO_2 78.69078310685678 49.0 150.0 9.090909090909092 43115733.0