Sample STAR_mqc-generalstats-star-uniquely_mapped_percent STAR_mqc-generalstats-star-uniquely_mapped Picard_mqc-generalstats-picard-PCT_RIBOSOMAL_BASES Picard_mqc-generalstats-picard-PCT_MRNA_BASES Picard_mqc-generalstats-picard-summed_median Picard_mqc-generalstats-picard-summed_mean featureCounts_mqc-generalstats-featurecounts-percent_assigned featureCounts_mqc-generalstats-featurecounts-Assigned Samtools_mqc-generalstats-samtools-flagstat_total Samtools_mqc-generalstats-samtools-mapped_passed fastp_mqc-generalstats-fastp-pct_duplication fastp_mqc-generalstats-fastp-after_filtering_q30_rate fastp_mqc-generalstats-fastp-after_filtering_q30_bases fastp_mqc-generalstats-fastp-after_filtering_gc_content fastp_mqc-generalstats-fastp-pct_surviving fastp_mqc-generalstats-fastp-pct_adapter FastQC_mqc-generalstats-fastqc-percent_duplicates FastQC_mqc-generalstats-fastqc-percent_gc FastQC_mqc-generalstats-fastqc-avg_sequence_length FastQC_mqc-generalstats-fastqc-percent_fails FastQC_mqc-generalstats-fastqc-total_sequences PRJNA395963_M10_PRJNA395963_M10 87.34 34026943.0 PRJNA395963_M10_primary_unique 0.2916 84.7918 197 409.457081 PRJNA395963_M10_sorted 93.21699865897445 31718895 PRJNA395963_M10_statistics_for_all_accepted_reads 86371660 86371660 PRJNA395963_M10_statistics_for_primary_reads 75035876 75035876 PRJNA395963_M10_statistics_for_primary_unique_reads 68053886 68053886 PRJNA395963_M11_PRJNA395963_M11 86.23 34104773.0 PRJNA395963_M11_primary_unique 0.5026 84.3 175 336.538954 PRJNA395963_M11_sorted 93.00031406161243 31717546 PRJNA395963_M11_statistics_for_all_accepted_reads 88690376 88690376 PRJNA395963_M11_statistics_for_primary_reads 75824340 75824340 PRJNA395963_M11_statistics_for_primary_unique_reads 68209546 68209546 PRJNA395963_M12_PRJNA395963_M12 87.59 31149159.0 PRJNA395963_M12_primary_unique 0.2987 84.3333 189 401.552332 PRJNA395963_M12_sorted 93.34838221474936 29077236 PRJNA395963_M12_statistics_for_all_accepted_reads 78972312 78972312 PRJNA395963_M12_statistics_for_primary_reads 68564818 68564818 PRJNA395963_M12_statistics_for_primary_unique_reads 62298318 62298318 PRJNA395963_M13_PRJNA395963_M13 87.48 20812336.0 PRJNA395963_M13_primary_unique 0.3796 86.52250000000001 191 406.106501 PRJNA395963_M13_sorted 93.9664966008621 19556623 PRJNA395963_M13_statistics_for_all_accepted_reads 52832430 52832430 PRJNA395963_M13_statistics_for_primary_reads 45796408 45796408 PRJNA395963_M13_statistics_for_primary_unique_reads 41624672 41624672 PRJNA395963_M14_PRJNA395963_M14 87.37 21659434.0 PRJNA395963_M14_primary_unique 0.6278 84.5823 180 353.037594 PRJNA395963_M14_sorted 94.18471415273363 20399876 PRJNA395963_M14_statistics_for_all_accepted_reads 54832100 54832100 PRJNA395963_M14_statistics_for_primary_reads 47525884 47525884 PRJNA395963_M14_statistics_for_primary_unique_reads 43318868 43318868 PRJNA395963_M15_PRJNA395963_M15 87.66 18109694.0 PRJNA395963_M15_primary_unique 0.6786000000000001 86.0715 186 394.480491 PRJNA395963_M15_sorted 94.16521891534998 17053033 PRJNA395963_M15_statistics_for_all_accepted_reads 45688922 45688922 PRJNA395963_M15_statistics_for_primary_reads 39767072 39767072 PRJNA395963_M15_statistics_for_primary_unique_reads 36219388 36219388 PRJNA395963_M16_PRJNA395963_M16 87.9 19540681.0 PRJNA395963_M16_primary_unique 0.3629 87.16239999999999 188 397.078262 PRJNA395963_M16_sorted 94.25531791855157 18418131 PRJNA395963_M16_statistics_for_all_accepted_reads 49068452 49068452 PRJNA395963_M16_statistics_for_primary_reads 42838364 42838364 PRJNA395963_M16_statistics_for_primary_unique_reads 39081362 39081362 PRJNA395963_M17_PRJNA395963_M17 84.52 24861229.0 PRJNA395963_M17_primary_unique 0.5368 84.9623 222 480.994791 PRJNA395963_M17_sorted 94.51624052857564 23497899 PRJNA395963_M17_statistics_for_all_accepted_reads 62664244 62664244 PRJNA395963_M17_statistics_for_primary_reads 54482634 54482634 PRJNA395963_M17_statistics_for_primary_unique_reads 49722458 49722458 PRJNA395963_M18_PRJNA395963_M18 88.57 30595849.0 PRJNA395963_M18_primary_unique 0.7002999999999999 86.9379 207 456.37356099999994 PRJNA395963_M18_sorted 94.5280681702933 28921665 PRJNA395963_M18_statistics_for_all_accepted_reads 75681096 75681096 PRJNA395963_M18_statistics_for_primary_reads 66751280 66751280 PRJNA395963_M18_statistics_for_primary_unique_reads 61191698 61191698 PRJNA395963_M19_PRJNA395963_M19 87.53 29047779.0 PRJNA395963_M19_primary_unique 0.4328 86.9104 216 497.998012 PRJNA395963_M19_sorted 94.4116725757243 27424494 PRJNA395963_M19_statistics_for_all_accepted_reads 71995536 71995536 PRJNA395963_M19_statistics_for_primary_reads 63316348 63316348 PRJNA395963_M19_statistics_for_primary_unique_reads 58095558 58095558 PRJNA395963_M1_PRJNA395963_M1 81.32 27119693.0 PRJNA395963_M1_primary_unique 0.4979 86.1812 214 456.99792 PRJNA395963_M1_sorted 92.68378517411684 25135558 PRJNA395963_M1_statistics_for_all_accepted_reads 76312986 76312986 PRJNA395963_M1_statistics_for_primary_reads 61925798 61925798 PRJNA395963_M1_statistics_for_primary_unique_reads 54239386 54239386 PRJNA395963_M20_PRJNA395963_M20 86.67 27643470.0 PRJNA395963_M20_primary_unique 0.7126 85.6073 208 457.364888 PRJNA395963_M20_sorted 94.202482539276 26040835 PRJNA395963_M20_statistics_for_all_accepted_reads 68826950 68826950 PRJNA395963_M20_statistics_for_primary_reads 60434682 60434682 PRJNA395963_M20_statistics_for_primary_unique_reads 55286940 55286940 PRJNA395963_M21_PRJNA395963_M21 88.04 27943794.0 PRJNA395963_M21_primary_unique 0.5773999999999999 86.4447 216 493.40587 PRJNA395963_M21_sorted 94.63895632783436 26445715 PRJNA395963_M21_statistics_for_all_accepted_reads 69410284 69410284 PRJNA395963_M21_statistics_for_primary_reads 61038096 61038096 PRJNA395963_M21_statistics_for_primary_unique_reads 55887588 55887588 PRJNA395963_M22_PRJNA395963_M22 87.38 26936727.0 PRJNA395963_M22_primary_unique 1.5283 84.6847 216 471.98688699999997 PRJNA395963_M22_sorted 94.3652582587335 25418912 PRJNA395963_M22_statistics_for_all_accepted_reads 65690776 65690776 PRJNA395963_M22_statistics_for_primary_reads 58537016 58537016 PRJNA395963_M22_statistics_for_primary_unique_reads 53873454 53873454 PRJNA395963_M23_PRJNA395963_M23 89.22 29012078.0 PRJNA395963_M23_primary_unique 1.1528 87.0507 235 551.581297 PRJNA395963_M23_sorted 94.85514619118285 27519449 PRJNA395963_M23_statistics_for_all_accepted_reads 70457808 70457808 PRJNA395963_M23_statistics_for_primary_reads 62889002 62889002 PRJNA395963_M23_statistics_for_primary_unique_reads 58024156 58024156 PRJNA395963_M24_PRJNA395963_M24 88.52 27567928.0 PRJNA395963_M24_primary_unique 0.5841 85.1839 225 521.391461 PRJNA395963_M24_sorted 94.49473315513592 26050240 PRJNA395963_M24_statistics_for_all_accepted_reads 67060416 67060416 PRJNA395963_M24_statistics_for_primary_reads 59824112 59824112 PRJNA395963_M24_statistics_for_primary_unique_reads 55135856 55135856 PRJNA395963_M2_PRJNA395963_M2 80.33 25042330.0 PRJNA395963_M2_primary_unique 0.41900000000000004 84.64970000000001 218 461.194431 PRJNA395963_M2_sorted 93.96265044027453 23530437 PRJNA395963_M2_statistics_for_all_accepted_reads 71083134 71083134 PRJNA395963_M2_statistics_for_primary_reads 56959728 56959728 PRJNA395963_M2_statistics_for_primary_unique_reads 50084660 50084660 PRJNA395963_M3_PRJNA395963_M3 82.68 26004064.0 PRJNA395963_M3_primary_unique 0.5087 84.31689999999999 203 398.252229 PRJNA395963_M3_sorted 93.02487488109551 24190248 PRJNA395963_M3_statistics_for_all_accepted_reads 71565708 71565708 PRJNA395963_M3_statistics_for_primary_reads 58896160 58896160 PRJNA395963_M3_statistics_for_primary_unique_reads 52008128 52008128 PRJNA395963_M4_PRJNA395963_M4 79.74 25596415.0 PRJNA395963_M4_primary_unique 0.402 84.9812 212 438.234456 PRJNA395963_M4_sorted 93.77716762288782 24003593 PRJNA395963_M4_statistics_for_all_accepted_reads 73770116 73770116 PRJNA395963_M4_statistics_for_primary_reads 58540572 58540572 PRJNA395963_M4_statistics_for_primary_unique_reads 51192830 51192830 PRJNA395963_M5_PRJNA395963_M5 83.32 39628036.0 PRJNA395963_M5_primary_unique 0.5474 84.6345 211 449.130837 PRJNA395963_M5_sorted 93.54001041081116 37068069 PRJNA395963_M5_statistics_for_all_accepted_reads 107655716 107655716 PRJNA395963_M5_statistics_for_primary_reads 89237796 89237796 PRJNA395963_M5_statistics_for_primary_unique_reads 79256072 79256072 PRJNA395963_M6_PRJNA395963_M6 83.46 22103540.0 PRJNA395963_M6_primary_unique 0.9976 85.1351 214 460.36328799999995 PRJNA395963_M6_sorted 93.27603632721274 20617306 PRJNA395963_M6_statistics_for_all_accepted_reads 59918296 59918296 PRJNA395963_M6_statistics_for_primary_reads 49807756 49807756 PRJNA395963_M6_statistics_for_primary_unique_reads 44207080 44207080 PRJNA395963_M7_PRJNA395963_M7 84.41 31649082.0 PRJNA395963_M7_primary_unique 0.8647 83.85000000000001 212 449.389257 PRJNA395963_M7_sorted 93.06703745783211 29454863 PRJNA395963_M7_statistics_for_all_accepted_reads 84448534 84448534 PRJNA395963_M7_statistics_for_primary_reads 70964634 70964634 PRJNA395963_M7_statistics_for_primary_unique_reads 63298164 63298164 PRJNA395963_M8_PRJNA395963_M8 79.92 30849177.0 PRJNA395963_M8_primary_unique 0.69 85.2673 212 452.705401 PRJNA395963_M8_sorted 93.96356991954761 28986988 PRJNA395963_M8_statistics_for_all_accepted_reads 88833522 88833522 PRJNA395963_M8_statistics_for_primary_reads 70477522 70477522 PRJNA395963_M8_statistics_for_primary_unique_reads 61698354 61698354 PRJNA395963_M9_PRJNA395963_M9 87.6 37923766.0 PRJNA395963_M9_primary_unique 0.5214 84.39370000000001 190 368.46546 PRJNA395963_M9_sorted 93.05724805917218 35290813 PRJNA395963_M9_statistics_for_all_accepted_reads 95823254 95823254 PRJNA395963_M9_statistics_for_primary_reads 83735888 83735888 PRJNA395963_M9_statistics_for_primary_unique_reads 75847532 75847532 SRR5874291_pass_1 22.2912 0.955048 4919168795.0 0.487751 98.17476190888368 0.25380097148522696 66.264994073103 48.0 76.0 20.0 34543603.0 SRR5874291_pass_2 64.99231565547042 48.0 76.0 20.0 34543603.0 SRR5874292_pass_1 20.2374 0.952073 4108340130.0 0.484734 96.62505490590182 0.39009368340747047 63.596645453780894 48.0 76.0 20.0 29413960.0 SRR5874292_pass_2 61.283165017641124 48.0 76.0 20.0 29413960.0 SRR5874293_pass_1 25.481199999999998 0.940664 5462873100.0 0.478698 98.16383599660385 0.36908492436259005 68.05375876012874 47.0 76.0 20.0 38960681.0 SRR5874293_pass_2 66.77650464790045 47.0 76.0 20.0 38960681.0 SRR5874294_pass_1 26.338 0.937488 6024233689.0 0.477672 97.74894960212924 0.37172037874308794 68.39639619692527 47.0 76.0 20.0 43293833.0 SRR5874294_pass_2 66.82073379549401 47.0 76.0 20.0 43293833.0 SRR5874295_pass_1 24.8792 0.936584 4953219876.0 0.477205 97.94016655257673 0.39355126725324574 66.01892764365724 47.0 76.0 20.0 35562584.0 SRR5874295_pass_2 64.60418700402569 47.0 76.0 20.0 35562584.0 SRR5874296_pass_1 26.4818 0.941423 5543831383.0 0.477363 98.05841816921964 0.41354982023167686 68.10626999882295 47.0 76.0 20.0 39551462.0 SRR5874296_pass_2 66.58259637050685 47.0 76.0 20.0 39551462.0 SRR5874297_pass_1 20.529 0.937661 3453964751.0 0.47817 97.8826292386564 0.4722268948071379 61.964496970346 47.0 76.0 20.0 24789990.0 SRR5874297_pass_2 60.64152935658427 47.0 76.0 20.0 24789990.0 SRR5874298_pass_1 22.7243 0.93747 3318600530.0 0.479614 98.0077477713251 0.41665740149490055 64.61706621385974 47.0 76.0 20.0 23789809.0 SRR5874298_pass_2 63.14803843670565 48.0 76.0 20.0 23789809.0 SRR5874299_pass_1 21.1183 0.936311 3090138474.0 0.484098 97.78337208785541 0.4237461968957637 63.114326677728975 48.0 76.0 20.0 22230524.0 SRR5874299_pass_2 61.60693529649323 48.0 76.0 20.0 22230524.0 SRR5874300_pass_1 19.8662 0.935463 2868662568.0 0.484013 97.78089216336112 0.4530343484447889 61.58653111056551 48.0 76.0 20.0 20658257.0 SRR5874300_pass_2 60.176787188736725 48.0 76.0 20.0 20658257.0 SRR5874301_pass_1 20.5395 0.954016 4329149188.0 0.486902 96.92839033330455 0.2521481758112539 64.52915835116227 48.0 76.0 20.0 30825922.0 SRR5874301_pass_2 62.69570566535435 48.0 76.0 20.0 30825922.0 SRR5874302_pass_1 21.820899999999998 0.954417 4495799760.0 0.485865 97.7080639407084 0.23430148542794094 65.6708942281845 48.0 76.0 20.0 31741156.0 SRR5874302_pass_2 64.16397820363605 48.0 76.0 20.0 31741156.0 SRR5874303_pass_1 21.8579 0.952222 4503548584.0 0.485327 97.62604917336327 0.24195951055563533 65.13619523297885 48.0 76.0 20.0 31896659.0 SRR5874303_pass_2 63.53889560811922 48.0 76.0 20.0 31896659.0 SRR5874304_pass_1 22.3396 0.955038 4693513841.0 0.486127 97.4995440159388 0.23457754632332511 66.20469816339634 48.0 76.0 20.0 33186467.0 SRR5874304_pass_2 64.28036028389928 48.0 76.0 20.0 33186467.0 SRR5874305_pass_1 23.5171 0.952949 4432599001.0 0.476738 98.23988095066247 0.2563929834286222 66.04723984738216 47.0 76.0 20.0 31173630.0 SRR5874305_pass_2 64.9936555247184 47.0 76.0 20.0 31173630.0 SRR5874306_pass_1 26.381 0.953877 4739980139.0 0.47738 98.10676950375262 0.25918380969613497 69.76584663164908 47.0 76.0 20.0 33347762.0 SRR5874306_pass_2 68.60339285421834 47.0 76.0 20.0 33347762.0 SRR5874307_pass_1 19.8784 0.953537 4385300523.0 0.486362 97.23130758710586 0.25985590261483515 63.41470850731286 48.0 76.0 20.0 31143799.0 SRR5874307_pass_2 61.78075111628072 48.0 76.0 20.0 31143799.0 SRR5874308_pass_1 20.389699999999998 0.953113 4607494665.0 0.488157 97.88578310079876 0.24896241059703095 65.5699554686673 48.0 76.0 20.0 32516957.0 SRR5874308_pass_2 64.03997807530794 48.0 76.0 20.0 32516957.0 SRR5874309_pass_1 25.7986 0.954476 4568253790.0 0.476232 98.17028147430943 0.25600383303255364 67.8488730200746 47.0 76.0 20.0 32099910.0 SRR5874309_pass_2 66.4702150304102 47.0 76.0 20.0 32099910.0 SRR5874310_pass_1 23.895 0.952426 4469748354.0 0.476962 98.24157934815959 0.24543932695196805 66.69022765983743 47.0 76.0 20.0 31450950.0 SRR5874310_pass_2 65.35701414656936 47.0 76.0 20.0 31450950.0 SRR5874311_pass_1 24.370900000000002 0.954485 5334445117.0 0.477716 98.13817424990076 0.2616584798381596 68.06733322357724 47.0 76.0 20.0 37496205.0 SRR5874311_pass_2 66.51499163440728 47.0 76.0 20.0 37496205.0 SRR5874312_pass_1 26.1054 0.955068 5503068137.0 0.477606 98.27725619068677 0.26449329285328754 68.96357582475505 47.0 76.0 20.0 38601735.0 SRR5874312_pass_2 67.58232837950561 47.0 76.0 20.0 38601735.0 SRR5874313_pass_1 26.9588 0.954643 6769669523.0 0.477996 98.16776197965554 0.2589879847909001 70.00999715535946 47.0 76.0 20.0 47562052.0 SRR5874313_pass_2 68.71140419922284 47.0 76.0 20.0 47562052.0 SRR5874314_pass_1 22.9424 0.948666 3748952396.0 0.477006 98.24960852015995 0.26501277470466883 65.61523000239472 47.0 76.0 20.0 26484761.0 SRR5874314_pass_2 64.74737973698345 47.0 76.0 20.0 26484761.0