Sample	total_passed	total_failed	secondary_passed	secondary_failed	supplementary_passed	supplementary_failed	duplicates_passed	duplicates_failed	mapped_passed	mapped_failed	mapped_passed_pct	mapped_failed_pct	paired in sequencing_passed	paired in sequencing_failed	read1_passed	read1_failed	read2_passed	read2_failed	properly paired_passed	properly paired_failed	properly paired_passed_pct	properly paired_failed_pct	with itself and mate mapped_passed	with itself and mate mapped_failed	singletons_passed	singletons_failed	singletons_passed_pct	singletons_failed_pct	with mate mapped to a different chr_passed	with mate mapped to a different chr_failed	with mate mapped to a different chr (mapQ >= 5)_passed	with mate mapped to a different chr (mapQ >= 5)_failed	flagstat_total
PRJNA395963_M10_statistics_for_all_accepted_reads	86371660	0	11335784	0	0	0	0	0	86371660	0	100.0	nan	75035876	0	37517938	0	37517938	0	75035876	0	100.0	nan	75035876	0	0	0	0.0	nan	0	0	0	0	86371660
PRJNA395963_M10_statistics_for_primary_reads	75035876	0	0	0	0	0	0	0	75035876	0	100.0	nan	75035876	0	37517938	0	37517938	0	75035876	0	100.0	nan	75035876	0	0	0	0.0	nan	0	0	0	0	75035876
PRJNA395963_M10_statistics_for_primary_unique_reads	68053886	0	0	0	0	0	0	0	68053886	0	100.0	nan	68053886	0	34026943	0	34026943	0	68053886	0	100.0	nan	68053886	0	0	0	0.0	nan	0	0	0	0	68053886
PRJNA395963_M11_statistics_for_all_accepted_reads	88690376	0	12866036	0	0	0	0	0	88690376	0	100.0	nan	75824340	0	37912170	0	37912170	0	75824340	0	100.0	nan	75824340	0	0	0	0.0	nan	0	0	0	0	88690376
PRJNA395963_M11_statistics_for_primary_reads	75824340	0	0	0	0	0	0	0	75824340	0	100.0	nan	75824340	0	37912170	0	37912170	0	75824340	0	100.0	nan	75824340	0	0	0	0.0	nan	0	0	0	0	75824340
PRJNA395963_M11_statistics_for_primary_unique_reads	68209546	0	0	0	0	0	0	0	68209546	0	100.0	nan	68209546	0	34104773	0	34104773	0	68209546	0	100.0	nan	68209546	0	0	0	0.0	nan	0	0	0	0	68209546
PRJNA395963_M12_statistics_for_all_accepted_reads	78972312	0	10407494	0	0	0	0	0	78972312	0	100.0	nan	68564818	0	34282409	0	34282409	0	68564818	0	100.0	nan	68564818	0	0	0	0.0	nan	0	0	0	0	78972312
PRJNA395963_M12_statistics_for_primary_reads	68564818	0	0	0	0	0	0	0	68564818	0	100.0	nan	68564818	0	34282409	0	34282409	0	68564818	0	100.0	nan	68564818	0	0	0	0.0	nan	0	0	0	0	68564818
PRJNA395963_M12_statistics_for_primary_unique_reads	62298318	0	0	0	0	0	0	0	62298318	0	100.0	nan	62298318	0	31149159	0	31149159	0	62298318	0	100.0	nan	62298318	0	0	0	0.0	nan	0	0	0	0	62298318
PRJNA395963_M13_statistics_for_all_accepted_reads	52832430	0	7036022	0	0	0	0	0	52832430	0	100.0	nan	45796408	0	22898204	0	22898204	0	45796408	0	100.0	nan	45796408	0	0	0	0.0	nan	0	0	0	0	52832430
PRJNA395963_M13_statistics_for_primary_reads	45796408	0	0	0	0	0	0	0	45796408	0	100.0	nan	45796408	0	22898204	0	22898204	0	45796408	0	100.0	nan	45796408	0	0	0	0.0	nan	0	0	0	0	45796408
PRJNA395963_M13_statistics_for_primary_unique_reads	41624672	0	0	0	0	0	0	0	41624672	0	100.0	nan	41624672	0	20812336	0	20812336	0	41624672	0	100.0	nan	41624672	0	0	0	0.0	nan	0	0	0	0	41624672
PRJNA395963_M14_statistics_for_all_accepted_reads	54832100	0	7306216	0	0	0	0	0	54832100	0	100.0	nan	47525884	0	23762942	0	23762942	0	47525884	0	100.0	nan	47525884	0	0	0	0.0	nan	0	0	0	0	54832100
PRJNA395963_M14_statistics_for_primary_reads	47525884	0	0	0	0	0	0	0	47525884	0	100.0	nan	47525884	0	23762942	0	23762942	0	47525884	0	100.0	nan	47525884	0	0	0	0.0	nan	0	0	0	0	47525884
PRJNA395963_M14_statistics_for_primary_unique_reads	43318868	0	0	0	0	0	0	0	43318868	0	100.0	nan	43318868	0	21659434	0	21659434	0	43318868	0	100.0	nan	43318868	0	0	0	0.0	nan	0	0	0	0	43318868
PRJNA395963_M15_statistics_for_all_accepted_reads	45688922	0	5921850	0	0	0	0	0	45688922	0	100.0	nan	39767072	0	19883536	0	19883536	0	39767072	0	100.0	nan	39767072	0	0	0	0.0	nan	0	0	0	0	45688922
PRJNA395963_M15_statistics_for_primary_reads	39767072	0	0	0	0	0	0	0	39767072	0	100.0	nan	39767072	0	19883536	0	19883536	0	39767072	0	100.0	nan	39767072	0	0	0	0.0	nan	0	0	0	0	39767072
PRJNA395963_M15_statistics_for_primary_unique_reads	36219388	0	0	0	0	0	0	0	36219388	0	100.0	nan	36219388	0	18109694	0	18109694	0	36219388	0	100.0	nan	36219388	0	0	0	0.0	nan	0	0	0	0	36219388
PRJNA395963_M16_statistics_for_all_accepted_reads	49068452	0	6230088	0	0	0	0	0	49068452	0	100.0	nan	42838364	0	21419182	0	21419182	0	42838364	0	100.0	nan	42838364	0	0	0	0.0	nan	0	0	0	0	49068452
PRJNA395963_M16_statistics_for_primary_reads	42838364	0	0	0	0	0	0	0	42838364	0	100.0	nan	42838364	0	21419182	0	21419182	0	42838364	0	100.0	nan	42838364	0	0	0	0.0	nan	0	0	0	0	42838364
PRJNA395963_M16_statistics_for_primary_unique_reads	39081362	0	0	0	0	0	0	0	39081362	0	100.0	nan	39081362	0	19540681	0	19540681	0	39081362	0	100.0	nan	39081362	0	0	0	0.0	nan	0	0	0	0	39081362
PRJNA395963_M17_statistics_for_all_accepted_reads	62664244	0	8181610	0	0	0	0	0	62664244	0	100.0	nan	54482634	0	27241317	0	27241317	0	54482634	0	100.0	nan	54482634	0	0	0	0.0	nan	0	0	0	0	62664244
PRJNA395963_M17_statistics_for_primary_reads	54482634	0	0	0	0	0	0	0	54482634	0	100.0	nan	54482634	0	27241317	0	27241317	0	54482634	0	100.0	nan	54482634	0	0	0	0.0	nan	0	0	0	0	54482634
PRJNA395963_M17_statistics_for_primary_unique_reads	49722458	0	0	0	0	0	0	0	49722458	0	100.0	nan	49722458	0	24861229	0	24861229	0	49722458	0	100.0	nan	49722458	0	0	0	0.0	nan	0	0	0	0	49722458
PRJNA395963_M18_statistics_for_all_accepted_reads	75681096	0	8929816	0	0	0	0	0	75681096	0	100.0	nan	66751280	0	33375640	0	33375640	0	66751280	0	100.0	nan	66751280	0	0	0	0.0	nan	0	0	0	0	75681096
PRJNA395963_M18_statistics_for_primary_reads	66751280	0	0	0	0	0	0	0	66751280	0	100.0	nan	66751280	0	33375640	0	33375640	0	66751280	0	100.0	nan	66751280	0	0	0	0.0	nan	0	0	0	0	66751280
PRJNA395963_M18_statistics_for_primary_unique_reads	61191698	0	0	0	0	0	0	0	61191698	0	100.0	nan	61191698	0	30595849	0	30595849	0	61191698	0	100.0	nan	61191698	0	0	0	0.0	nan	0	0	0	0	61191698
PRJNA395963_M19_statistics_for_all_accepted_reads	71995536	0	8679188	0	0	0	0	0	71995536	0	100.0	nan	63316348	0	31658174	0	31658174	0	63316348	0	100.0	nan	63316348	0	0	0	0.0	nan	0	0	0	0	71995536
PRJNA395963_M19_statistics_for_primary_reads	63316348	0	0	0	0	0	0	0	63316348	0	100.0	nan	63316348	0	31658174	0	31658174	0	63316348	0	100.0	nan	63316348	0	0	0	0.0	nan	0	0	0	0	63316348
PRJNA395963_M19_statistics_for_primary_unique_reads	58095558	0	0	0	0	0	0	0	58095558	0	100.0	nan	58095558	0	29047779	0	29047779	0	58095558	0	100.0	nan	58095558	0	0	0	0.0	nan	0	0	0	0	58095558
PRJNA395963_M1_statistics_for_all_accepted_reads	76312986	0	14387188	0	0	0	0	0	76312986	0	100.0	nan	61925798	0	30962899	0	30962899	0	61925798	0	100.0	nan	61925798	0	0	0	0.0	nan	0	0	0	0	76312986
PRJNA395963_M1_statistics_for_primary_reads	61925798	0	0	0	0	0	0	0	61925798	0	100.0	nan	61925798	0	30962899	0	30962899	0	61925798	0	100.0	nan	61925798	0	0	0	0.0	nan	0	0	0	0	61925798
PRJNA395963_M1_statistics_for_primary_unique_reads	54239386	0	0	0	0	0	0	0	54239386	0	100.0	nan	54239386	0	27119693	0	27119693	0	54239386	0	100.0	nan	54239386	0	0	0	0.0	nan	0	0	0	0	54239386
PRJNA395963_M20_statistics_for_all_accepted_reads	68826950	0	8392268	0	0	0	0	0	68826950	0	100.0	nan	60434682	0	30217341	0	30217341	0	60434682	0	100.0	nan	60434682	0	0	0	0.0	nan	0	0	0	0	68826950
PRJNA395963_M20_statistics_for_primary_reads	60434682	0	0	0	0	0	0	0	60434682	0	100.0	nan	60434682	0	30217341	0	30217341	0	60434682	0	100.0	nan	60434682	0	0	0	0.0	nan	0	0	0	0	60434682
PRJNA395963_M20_statistics_for_primary_unique_reads	55286940	0	0	0	0	0	0	0	55286940	0	100.0	nan	55286940	0	27643470	0	27643470	0	55286940	0	100.0	nan	55286940	0	0	0	0.0	nan	0	0	0	0	55286940
PRJNA395963_M21_statistics_for_all_accepted_reads	69410284	0	8372188	0	0	0	0	0	69410284	0	100.0	nan	61038096	0	30519048	0	30519048	0	61038096	0	100.0	nan	61038096	0	0	0	0.0	nan	0	0	0	0	69410284
PRJNA395963_M21_statistics_for_primary_reads	61038096	0	0	0	0	0	0	0	61038096	0	100.0	nan	61038096	0	30519048	0	30519048	0	61038096	0	100.0	nan	61038096	0	0	0	0.0	nan	0	0	0	0	61038096
PRJNA395963_M21_statistics_for_primary_unique_reads	55887588	0	0	0	0	0	0	0	55887588	0	100.0	nan	55887588	0	27943794	0	27943794	0	55887588	0	100.0	nan	55887588	0	0	0	0.0	nan	0	0	0	0	55887588
PRJNA395963_M22_statistics_for_all_accepted_reads	65690776	0	7153760	0	0	0	0	0	65690776	0	100.0	nan	58537016	0	29268508	0	29268508	0	58537016	0	100.0	nan	58537016	0	0	0	0.0	nan	0	0	0	0	65690776
PRJNA395963_M22_statistics_for_primary_reads	58537016	0	0	0	0	0	0	0	58537016	0	100.0	nan	58537016	0	29268508	0	29268508	0	58537016	0	100.0	nan	58537016	0	0	0	0.0	nan	0	0	0	0	58537016
PRJNA395963_M22_statistics_for_primary_unique_reads	53873454	0	0	0	0	0	0	0	53873454	0	100.0	nan	53873454	0	26936727	0	26936727	0	53873454	0	100.0	nan	53873454	0	0	0	0.0	nan	0	0	0	0	53873454
PRJNA395963_M23_statistics_for_all_accepted_reads	70457808	0	7568806	0	0	0	0	0	70457808	0	100.0	nan	62889002	0	31444501	0	31444501	0	62889002	0	100.0	nan	62889002	0	0	0	0.0	nan	0	0	0	0	70457808
PRJNA395963_M23_statistics_for_primary_reads	62889002	0	0	0	0	0	0	0	62889002	0	100.0	nan	62889002	0	31444501	0	31444501	0	62889002	0	100.0	nan	62889002	0	0	0	0.0	nan	0	0	0	0	62889002
PRJNA395963_M23_statistics_for_primary_unique_reads	58024156	0	0	0	0	0	0	0	58024156	0	100.0	nan	58024156	0	29012078	0	29012078	0	58024156	0	100.0	nan	58024156	0	0	0	0.0	nan	0	0	0	0	58024156
PRJNA395963_M24_statistics_for_all_accepted_reads	67060416	0	7236304	0	0	0	0	0	67060416	0	100.0	nan	59824112	0	29912056	0	29912056	0	59824112	0	100.0	nan	59824112	0	0	0	0.0	nan	0	0	0	0	67060416
PRJNA395963_M24_statistics_for_primary_reads	59824112	0	0	0	0	0	0	0	59824112	0	100.0	nan	59824112	0	29912056	0	29912056	0	59824112	0	100.0	nan	59824112	0	0	0	0.0	nan	0	0	0	0	59824112
PRJNA395963_M24_statistics_for_primary_unique_reads	55135856	0	0	0	0	0	0	0	55135856	0	100.0	nan	55135856	0	27567928	0	27567928	0	55135856	0	100.0	nan	55135856	0	0	0	0.0	nan	0	0	0	0	55135856
PRJNA395963_M2_statistics_for_all_accepted_reads	71083134	0	14123406	0	0	0	0	0	71083134	0	100.0	nan	56959728	0	28479864	0	28479864	0	56959728	0	100.0	nan	56959728	0	0	0	0.0	nan	0	0	0	0	71083134
PRJNA395963_M2_statistics_for_primary_reads	56959728	0	0	0	0	0	0	0	56959728	0	100.0	nan	56959728	0	28479864	0	28479864	0	56959728	0	100.0	nan	56959728	0	0	0	0.0	nan	0	0	0	0	56959728
PRJNA395963_M2_statistics_for_primary_unique_reads	50084660	0	0	0	0	0	0	0	50084660	0	100.0	nan	50084660	0	25042330	0	25042330	0	50084660	0	100.0	nan	50084660	0	0	0	0.0	nan	0	0	0	0	50084660
PRJNA395963_M3_statistics_for_all_accepted_reads	71565708	0	12669548	0	0	0	0	0	71565708	0	100.0	nan	58896160	0	29448080	0	29448080	0	58896160	0	100.0	nan	58896160	0	0	0	0.0	nan	0	0	0	0	71565708
PRJNA395963_M3_statistics_for_primary_reads	58896160	0	0	0	0	0	0	0	58896160	0	100.0	nan	58896160	0	29448080	0	29448080	0	58896160	0	100.0	nan	58896160	0	0	0	0.0	nan	0	0	0	0	58896160
PRJNA395963_M3_statistics_for_primary_unique_reads	52008128	0	0	0	0	0	0	0	52008128	0	100.0	nan	52008128	0	26004064	0	26004064	0	52008128	0	100.0	nan	52008128	0	0	0	0.0	nan	0	0	0	0	52008128
PRJNA395963_M4_statistics_for_all_accepted_reads	73770116	0	15229544	0	0	0	0	0	73770116	0	100.0	nan	58540572	0	29270286	0	29270286	0	58540572	0	100.0	nan	58540572	0	0	0	0.0	nan	0	0	0	0	73770116
PRJNA395963_M4_statistics_for_primary_reads	58540572	0	0	0	0	0	0	0	58540572	0	100.0	nan	58540572	0	29270286	0	29270286	0	58540572	0	100.0	nan	58540572	0	0	0	0.0	nan	0	0	0	0	58540572
PRJNA395963_M4_statistics_for_primary_unique_reads	51192830	0	0	0	0	0	0	0	51192830	0	100.0	nan	51192830	0	25596415	0	25596415	0	51192830	0	100.0	nan	51192830	0	0	0	0.0	nan	0	0	0	0	51192830
PRJNA395963_M5_statistics_for_all_accepted_reads	107655716	0	18417920	0	0	0	0	0	107655716	0	100.0	nan	89237796	0	44618898	0	44618898	0	89237796	0	100.0	nan	89237796	0	0	0	0.0	nan	0	0	0	0	107655716
PRJNA395963_M5_statistics_for_primary_reads	89237796	0	0	0	0	0	0	0	89237796	0	100.0	nan	89237796	0	44618898	0	44618898	0	89237796	0	100.0	nan	89237796	0	0	0	0.0	nan	0	0	0	0	89237796
PRJNA395963_M5_statistics_for_primary_unique_reads	79256072	0	0	0	0	0	0	0	79256072	0	100.0	nan	79256072	0	39628036	0	39628036	0	79256072	0	100.0	nan	79256072	0	0	0	0.0	nan	0	0	0	0	79256072
PRJNA395963_M6_statistics_for_all_accepted_reads	59918296	0	10110540	0	0	0	0	0	59918296	0	100.0	nan	49807756	0	24903878	0	24903878	0	49807756	0	100.0	nan	49807756	0	0	0	0.0	nan	0	0	0	0	59918296
PRJNA395963_M6_statistics_for_primary_reads	49807756	0	0	0	0	0	0	0	49807756	0	100.0	nan	49807756	0	24903878	0	24903878	0	49807756	0	100.0	nan	49807756	0	0	0	0.0	nan	0	0	0	0	49807756
PRJNA395963_M6_statistics_for_primary_unique_reads	44207080	0	0	0	0	0	0	0	44207080	0	100.0	nan	44207080	0	22103540	0	22103540	0	44207080	0	100.0	nan	44207080	0	0	0	0.0	nan	0	0	0	0	44207080
PRJNA395963_M7_statistics_for_all_accepted_reads	84448534	0	13483900	0	0	0	0	0	84448534	0	100.0	nan	70964634	0	35482317	0	35482317	0	70964634	0	100.0	nan	70964634	0	0	0	0.0	nan	0	0	0	0	84448534
PRJNA395963_M7_statistics_for_primary_reads	70964634	0	0	0	0	0	0	0	70964634	0	100.0	nan	70964634	0	35482317	0	35482317	0	70964634	0	100.0	nan	70964634	0	0	0	0.0	nan	0	0	0	0	70964634
PRJNA395963_M7_statistics_for_primary_unique_reads	63298164	0	0	0	0	0	0	0	63298164	0	100.0	nan	63298164	0	31649082	0	31649082	0	63298164	0	100.0	nan	63298164	0	0	0	0.0	nan	0	0	0	0	63298164
PRJNA395963_M8_statistics_for_all_accepted_reads	88833522	0	18356000	0	0	0	0	0	88833522	0	100.0	nan	70477522	0	35238761	0	35238761	0	70477522	0	100.0	nan	70477522	0	0	0	0.0	nan	0	0	0	0	88833522
PRJNA395963_M8_statistics_for_primary_reads	70477522	0	0	0	0	0	0	0	70477522	0	100.0	nan	70477522	0	35238761	0	35238761	0	70477522	0	100.0	nan	70477522	0	0	0	0.0	nan	0	0	0	0	70477522
PRJNA395963_M8_statistics_for_primary_unique_reads	61698354	0	0	0	0	0	0	0	61698354	0	100.0	nan	61698354	0	30849177	0	30849177	0	61698354	0	100.0	nan	61698354	0	0	0	0.0	nan	0	0	0	0	61698354
PRJNA395963_M9_statistics_for_all_accepted_reads	95823254	0	12087366	0	0	0	0	0	95823254	0	100.0	nan	83735888	0	41867944	0	41867944	0	83735888	0	100.0	nan	83735888	0	0	0	0.0	nan	0	0	0	0	95823254
PRJNA395963_M9_statistics_for_primary_reads	83735888	0	0	0	0	0	0	0	83735888	0	100.0	nan	83735888	0	41867944	0	41867944	0	83735888	0	100.0	nan	83735888	0	0	0	0.0	nan	0	0	0	0	83735888
PRJNA395963_M9_statistics_for_primary_unique_reads	75847532	0	0	0	0	0	0	0	75847532	0	100.0	nan	75847532	0	37923766	0	37923766	0	75847532	0	100.0	nan	75847532	0	0	0	0.0	nan	0	0	0	0	75847532