| Database and Motifs | High-scoring Motif Occurrences | Debugging Information |
FIMO version 4.10.0, (Release date: Wed May 21 10:35:36 2014 +1000)
For further information on how to interpret these results or to get a copy of the FIMO software please access http://meme.nbcr.net
If you use FIMO in your research, please cite the following paper:
Charles E. Grant, Timothy L. Bailey, and William Stafford Noble,
"FIMO: Scanning for occurrences of a given motif",
Bioinformatics, 27(7):1017-1018, 2011.
[full text]
DATABASE
Dynamic_Male-biased_Output/Dynamic_Male-biased.fa
Database contains
846
sequences,
423000
residues
MOTIFS ./JASPAR_CORE_2014_vertebrates.meme (nucleotide)
| MOTIF | WIDTH | BEST POSSIBLE MATCH |
|---|---|---|
| MA0004.1 | 6 | CACGTG |
| MA0006.1 | 6 | TGCGTG |
| MA0009.1 | 11 | CTAGGTGTGAA |
| MA0017.1 | 14 | TGACCTTTGAACCT |
| MA0019.1 | 12 | AGATGCAATCCC |
| MA0025.1 | 11 | TTATGTAACAT |
| MA0027.1 | 11 | AAGTAGTGTTC |
| MA0028.1 | 10 | GAGCCGGAAG |
| MA0029.1 | 14 | AAGATAAGATAATA |
| MA0030.1 | 14 | CAAACGTAAACAAT |
| MA0031.1 | 8 | GTAAACAT |
| MA0032.1 | 8 | GGTAAGTA |
| MA0033.1 | 8 | TATACATA |
| MA0038.1 | 10 | CAAATCACTG |
| MA0040.1 | 11 | TATTGTTTATT |
| MA0041.1 | 12 | GAATGTTTGTTT |
| MA0042.1 | 12 | GGATGTTTGTTT |
| MA0043.1 | 12 | GGTTACGTAATT |
| MA0046.1 | 14 | GGTTAATAATTAAC |
| MA0048.1 | 12 | GCGCAGCTGCGT |
| MA0051.1 | 18 | GGAAAGTGAAAGCAAAAC |
| MA0056.1 | 6 | TGGGGA |
| MA0057.1 | 10 | GTAGGGGGAA |
| MA0059.1 | 11 | GAGCACGTGGT |
| MA0063.1 | 7 | TTAATTG |
| MA0066.1 | 20 | GTAGGTCACGGTGACCTACT |
| MA0067.1 | 8 | AGTCACGG |
| MA0068.1 | 30 | GAAAAATTTCCAATACTCCACTCCCCCCCC |
| MA0069.1 | 14 | TTCACGCATGAGTT |
| MA0070.1 | 12 | CCATCAATCAAA |
| MA0071.1 | 10 | ATCAAGGTCA |
| MA0072.1 | 14 | TATAAGTAGGTCAA |
| MA0073.1 | 20 | CCCCAAACCACCCCCCCCCA |
| MA0074.1 | 15 | GGGTCATCGAGTTCA |
| MA0075.1 | 5 | AATTA |
| MA0077.1 | 9 | CCATTGTTC |
| MA0078.1 | 9 | TTCATTGTC |
| MA0081.1 | 7 | AGAGGAA |
| MA0084.1 | 9 | GTAAACAAT |
| MA0087.1 | 7 | ATTGTTT |
| MA0088.1 | 20 | GATTTCCCATAATGCCTTGC |
| MA0089.1 | 6 | CATGAC |
| MA0090.1 | 12 | CACATTCCTCCG |
| MA0091.1 | 12 | CGACCATCTGTT |
| MA0092.1 | 10 | GGTCTGGCAT |
| MA0101.1 | 10 | GGGGATTTCC |
| MA0107.1 | 10 | GGGAATTTCC |
| MA0108.2 | 15 | GTATAAAAGGCGGGG |
| MA0109.1 | 10 | AACCTTATAT |
| MA0111.1 | 11 | AGGGTAACAGC |
| MA0115.1 | 17 | AAAGGTCAAAGGTCAAC |
| MA0116.1 | 15 | GGCACCCAGGGGTGC |
| MA0117.1 | 8 | GCTGACGG |
| MA0119.1 | 14 | TGGCACCATGCCAA |
| MA0122.1 | 9 | TTAAGTGGA |
| MA0124.1 | 7 | ATACTTA |
| MA0125.1 | 8 | TAATTGGT |
| MA0130.1 | 6 | ATCCAC |
| MA0131.1 | 10 | TAACGTCCGC |
| MA0132.1 | 6 | CTAATT |
| MA0133.1 | 7 | ACAACAC |
| MA0135.1 | 13 | AAATTAATTAATC |
| MA0136.1 | 9 | TACTTCCTT |
| MA0139.1 | 19 | TGGCCACCAGGGGGCGCTA |
| MA0142.1 | 15 | CTTTGTTATGCAAAT |
| MA0149.1 | 18 | GGAAGGAAGGAAGGAAGG |
| MA0062.2 | 11 | CCGGAAGTGGC |
| MA0039.2 | 10 | TGGGTGGGGC |
| MA0138.2 | 21 | TTCAGCACCATGGACAGCGCC |
| MA0002.2 | 11 | GTCTGTGGTTT |
| MA0047.2 | 12 | TGTTTACTTAGG |
| MA0112.2 | 20 | GGCCCAGGTCACCCTGACCT |
| MA0065.2 | 15 | GTAGGGCAAAGGTCA |
| MA0151.1 | 6 | ATTAAA |
| MA0152.1 | 7 | TTTTCCA |
| MA0153.1 | 12 | TTAATATTTAAC |
| MA0155.1 | 12 | TGTCAGGGGGCG |
| MA0156.1 | 8 | CAGGAAAT |
| MA0157.1 | 8 | TGTAAACA |
| MA0158.1 | 8 | CACTAATT |
| MA0159.1 | 17 | AGGTCATGGAGAGGTCA |
| MA0160.1 | 8 | AAGGTCAC |
| MA0161.1 | 6 | TTGGCA |
| MA0163.1 | 14 | GGGGCCCAAGGGGG |
| MA0164.1 | 7 | CAAGCTT |
| MA0018.2 | 8 | TGACGTCA |
| MA0099.2 | 7 | TGACTCA |
| MA0259.1 | 8 | GGACGTGC |
| MA0442.1 | 6 | CTTTGT |
| MA0141.2 | 12 | AGGTCAAGGTCA |
| MA0145.2 | 14 | CCAGTTCAAACCAG |
| MA0146.2 | 14 | GGGGCCGAGGCCTG |
| MA0461.1 | 8 | CAGATGGC |
| MA0462.1 | 11 | GAAATGACTCA |
| MA0463.1 | 14 | TTTCCTAGAAAGCA |
| MA0464.1 | 11 | CTCACGTGCAC |
| MA0465.1 | 11 | AAGCCATAAAA |
| MA0466.1 | 11 | TATTGCACAAT |
| MA0467.1 | 11 | AAGAGGATTAG |
| MA0468.1 | 11 | TAATTTAATCA |
| MA0469.1 | 15 | CTCCCGCCCCCACTC |
| MA0470.1 | 11 | GGGCGGGAAGG |
| MA0471.1 | 11 | GGGCGGGAAGG |
| MA0472.1 | 15 | CCCCCGCCCACGCAC |
| MA0473.1 | 13 | GAACCAGGAAGTG |
| MA0474.1 | 11 | ACAGGAAGTGG |
| MA0475.1 | 11 | ACAGGAAGTGG |
| MA0476.1 | 11 | TGTGACTCATT |
| MA0477.1 | 11 | GGTGACTCATG |
| MA0478.1 | 11 | GGATGACTCAT |
| MA0479.1 | 11 | TCCAATCCACA |
| MA0480.1 | 11 | TCCTGTTTACA |
| MA0481.1 | 15 | CAAAAGTAAACAAAG |
| MA0482.1 | 11 | TCTTATCTCCC |
| MA0483.1 | 11 | AAATCACAGCA |
| MA0484.1 | 15 | AGAGTCCAAAGTCCA |
| MA0485.1 | 13 | GGCCATAAATCAC |
| MA0486.1 | 15 | CTTCTAGAAGGTTCT |
| MA0488.1 | 13 | AAGATGATGTCAT |
| MA0489.1 | 14 | AGGAGATGACTCAT |
| MA0490.1 | 11 | GGATGACTCAT |
| MA0491.1 | 11 | GGTGACTCATC |
| MA0492.1 | 15 | AAAGATGATGTCATC |
| MA0493.1 | 11 | GGCCACACCCA |
| MA0494.1 | 19 | TGACCTAAAGTAACCTCTG |
| MA0495.1 | 18 | GCTGAGTCAGCAATTTTT |
| MA0496.1 | 15 | CTGAGTCAGCAATTT |
| MA0497.1 | 15 | ATGCTAAAAATAGAA |
| MA0498.1 | 15 | AGCTGTCACTCACCT |
| MA0499.1 | 13 | TGCAGCTGTCCCT |
| MA0500.1 | 11 | GACAGCTGCAG |
| MA0501.1 | 15 | ATGACTCAGCAATTT |
| MA0502.1 | 15 | AAATGGACCAATCAG |
| MA0503.1 | 11 | AGCCACTCAAG |
| MA0504.1 | 15 | AGGGGTCAGAGGTCA |
| MA0505.1 | 15 | AAGTTCAAGGTCAGC |
| MA0506.1 | 11 | GCGCCTGCGCA |
| MA0507.1 | 13 | TTCATTTGCATAT |
| MA0508.1 | 15 | AGAAAGTGAAAGTGA |
| MA0509.1 | 14 | GTTGCCATGGCAAC |
| MA0510.1 | 15 | CTCCCTGGCAACAGC |
| MA0511.1 | 15 | GGGGTTTGTGGTTTG |
| MA0512.1 | 11 | CAAAGGTCAGA |
| MA0513.1 | 13 | CTGTCTGTCACCT |
| MA0514.1 | 10 | CCTTTGTTTT |
| MA0515.1 | 10 | CCATTGTTTT |
| MA0516.1 | 15 | GCCCCGCCCCCTCCC |
| MA0517.1 | 15 | TCAGTTTCATTTTCC |
| MA0518.1 | 14 | TTTCCAGGAAATGG |
| MA0519.1 | 11 | ATTTCCAAGAA |
| MA0520.1 | 15 | CATTTCCTGAGAAAT |
| MA0521.1 | 11 | AACAGCTGCAG |
| MA0522.1 | 11 | CACAGCTGCAG |
| MA0523.1 | 14 | AAAGATCAAAGGAA |
| MA0524.1 | 15 | CATGGCCCCAGGGCA |
| MA0525.1 | 20 | AGACATGCCCAGACATGCCC |
| MA0526.1 | 11 | GTCATGTGACC |
| MA0527.1 | 15 | CTCTCGCGAGATCTG |
| MA0528.1 | 21 | GGAGGAGGAGGGGGAGGAGGA |
| MA0007.2 | 15 | AAGAACAGAATGTTC |
| MA0102.3 | 11 | ATTGCACAATA |
| MA0024.2 | 11 | CGGGCGGGAGG |
| MA0154.2 | 11 | GTCCCCAGGGA |
| MA0162.2 | 14 | CCCCCGCCCCCGCC |
| MA0076.2 | 11 | CCACTTCCGGC |
| MA0258.2 | 15 | AGGTCACCCTGACCT |
| MA0098.2 | 15 | CCCACTTCCTGTCTC |
| MA0148.3 | 15 | TCCATGTTTACTTTG |
| MA0035.3 | 11 | TTCTTATCTGT |
| MA0036.2 | 14 | AGATTCTTATCTGT |
| MA0037.2 | 8 | AGATAAGA |
| MA0114.2 | 15 | CTGGACTTTGGACTC |
| MA0050.2 | 21 | TTTTACTTTCACTTTCACTTT |
| MA0058.2 | 10 | AAGCACATGG |
| MA0052.2 | 15 | AGCTAAAAATAGCAT |
| MA0100.2 | 10 | CCAACTGCCA |
| MA0147.2 | 10 | CCATGTGCTT |
| MA0104.3 | 8 | GCCACGTG |
| MA0150.2 | 15 | CAGCATGACTCAGCA |
| MA0105.3 | 11 | GGGAATTTCCC |
| MA0060.2 | 18 | AGAGTGCTGATTGGTCCA |
| MA0014.2 | 19 | GAGGGCAGCCAAGCGTGAC |
| MA0080.3 | 15 | AAAAAGAGGAAGTGA |
| MA0143.3 | 8 | CCTTTGTT |
| MA0079.3 | 11 | GCCCCGCCCCC |
| MA0083.2 | 18 | CATGCCCAAATAAGGCAA |
| MA0137.3 | 11 | TTTCCAGGAAA |
| MA0144.2 | 11 | CTTCTGGGAAA |
| MA0140.2 | 18 | CTTATCTGTGAGGAGCAG |
| MA0003.2 | 15 | CATTGCCTCAGGGCA |
| MA0106.2 | 15 | ACATGCCCAGACATG |
| MA0093.2 | 11 | GCCACGTGACC |
| MA0095.2 | 12 | CAAGATGGCGGC |
| MA0103.2 | 9 | CCTCACCTG |
| MA0591.1 | 15 | AGGATGACTCAGCAC |
| MA0592.1 | 11 | CCAAGGTCACA |
| MA0593.1 | 11 | AAGTAAACAAA |
| MA0594.1 | 11 | GCCATAAATCA |
| MA0595.1 | 10 | ATCACCCCAC |
| MA0596.1 | 10 | ATGGGGTGAT |
| MA0597.1 | 9 | CTGCCCGCA |
| MA0598.1 | 8 | CCTTCCTG |
| MA0599.1 | 10 | GCCCCGCCCC |
| MA0600.1 | 19 | GTTGCCATGGCAACCGCGG |
| MA0113.2 | 15 | AGAACAGAATGTTCT |
Random model letter frequencies
(from Dynamic_Male-biased_Output/background):
A 0.282 C 0.218 G 0.218 T 0.282
| Motif | Sequence Name | Strand | Start | End | p-value | q-value | Matched Sequence |
|---|---|---|---|---|---|---|---|
| MA0466.1 | chr3 | + | 133403586 | 133403596 | 7.32e-07 | 0.154 | TATTGCACAAT |
| MA0466.1 | chr4 | + | 125851193 | 125851203 | 7.32e-07 | 0.154 | TATTGCACAAT |
| MA0466.1 | chr8 | + | 63045918 | 63045928 | 7.32e-07 | 0.154 | GATTGCACAAT |
| MA0466.1 | chr2 | + | 102894603 | 102894613 | 1.3e-06 | 0.154 | GATTGCACCAT |
| MA0466.1 | chr1 | − | 104414743 | 104414753 | 1.87e-06 | 0.154 | TATTGCACAAC |
| MA0466.1 | chr17 | + | 29606664 | 29606674 | 1.87e-06 | 0.154 | GATTGCACAAC |
| MA0466.1 | chr17 | + | 70310420 | 70310430 | 1.87e-06 | 0.154 | TATTGCACAAC |
| MA0466.1 | chr8 | − | 56010521 | 56010531 | 1.87e-06 | 0.154 | TATTGCACAAC |
| MA0466.1 | chrX | + | 108739978 | 108739988 | 1.87e-06 | 0.154 | GATTGCACAAC |
| MA0466.1 | chrX | + | 138951250 | 138951260 | 1.87e-06 | 0.154 | TATTGCACAAC |
| MA0466.1 | chr3 | + | 148896812 | 148896822 | 2.31e-06 | 0.173 | GATTGCACCAC |
| MA0466.1 | chr18 | − | 59282912 | 59282922 | 3.25e-06 | 0.179 | GATTGCATAAT |
| MA0466.1 | chr2 | + | 134539194 | 134539204 | 3.25e-06 | 0.179 | TATTGCATAAT |
| MA0466.1 | chr2 | − | 143702579 | 143702589 | 3.25e-06 | 0.179 | TATTGCATAAT |
| MA0466.1 | chr3 | − | 59945222 | 59945232 | 3.25e-06 | 0.179 | GATTGCATAAT |
| MA0466.1 | chr10 | + | 92718386 | 92718396 | 3.98e-06 | 0.194 | GATTGCATCAT |
| MA0466.1 | chr5 | − | 96735485 | 96735495 | 3.98e-06 | 0.194 | TATTGCATCAT |
| MA0466.1 | chr6 | − | 100579178 | 100579188 | 4.72e-06 | 0.217 | GATTGCATAAC |
| MA0466.1 | chr7 | − | 47120206 | 47120216 | 5.28e-06 | 0.23 | GATTGCATCAC |
| MA0466.1 | chr9 | − | 122266395 | 122266405 | 6.58e-06 | 0.264 | AATTGCACAAT |
| MA0466.1 | chr11 | − | 5280557 | 5280567 | 8.03e-06 | 0.264 | TGTTGCACAAC |
| MA0466.1 | chr4 | − | 107796719 | 107796729 | 8.03e-06 | 0.264 | TGTTGCACAAC |
| MA0466.1 | chr6 | + | 147593073 | 147593083 | 8.03e-06 | 0.264 | TGTTGCACAAC |
| MA0466.1 | chr2 | − | 169979189 | 169979199 | 8.6e-06 | 0.264 | AATTGCACAAC |
| MA0466.1 | chr3 | + | 51815394 | 51815404 | 8.6e-06 | 0.264 | CATTGCACAAC |
| MA0466.1 | chr10 | + | 8671058 | 8671068 | 9.88e-06 | 0.264 | TATTTCACAAT |
| MA0466.1 | chr10 | + | 8671143 | 8671153 | 9.88e-06 | 0.264 | GATTTCACAAT |
| MA0466.1 | chr11 | − | 46378289 | 46378299 | 9.88e-06 | 0.264 | GATTTCACAAT |
| MA0466.1 | chr11 | + | 86427561 | 86427571 | 9.88e-06 | 0.264 | TATTTCACAAT |
| MA0466.1 | chr12 | − | 70965189 | 70965199 | 9.88e-06 | 0.264 | TATTTCACAAT |
| MA0466.1 | chr7 | − | 94519986 | 94519996 | 9.88e-06 | 0.264 | GATTTCACAAT |
| MA0466.1 | chr1 | − | 104414798 | 104414808 | 1.26e-05 | 0.303 | AATTGCATAAT |
| MA0466.1 | chr16 | − | 10676945 | 10676955 | 1.26e-05 | 0.303 | CATTGCATAAT |
| MA0466.1 | chr11 | − | 8469755 | 8469765 | 1.33e-05 | 0.303 | GATTTCACCAT |
| MA0466.1 | chr11 | + | 23041182 | 23041192 | 1.46e-05 | 0.303 | GATTTCACAAC |
| MA0466.1 | chr13 | + | 24470255 | 24470265 | 1.46e-05 | 0.303 | GATTTCACAAC |
| MA0466.1 | chr19 | + | 34387754 | 34387764 | 1.46e-05 | 0.303 | GATTTCACAAC |
| MA0466.1 | chr8 | + | 56010555 | 56010565 | 1.46e-05 | 0.303 | GATTTCACAAC |
| MA0466.1 | chr5 | − | 45968147 | 45968157 | 1.63e-05 | 0.303 | TGTTGCATAAC |
| MA0466.1 | chr1 | + | 40299854 | 40299864 | 1.75e-05 | 0.303 | AATTGCATAAC |
| MA0466.1 | chr8 | + | 63046075 | 63046085 | 1.75e-05 | 0.303 | AATTGCATAAC |
| MA0466.1 | chr1 | − | 138428101 | 138428111 | 1.85e-05 | 0.303 | TATTGCAAAAT |
| MA0466.1 | chr2 | − | 134370342 | 134370352 | 1.85e-05 | 0.303 | TATTGCAAAAT |
| MA0466.1 | chr3 | + | 98491732 | 98491742 | 1.85e-05 | 0.303 | TATTGCAAAAT |
| MA0466.1 | chr7 | − | 87801533 | 87801543 | 1.85e-05 | 0.303 | TATTGCAAAAT |
| MA0466.1 | chr8 | + | 107351059 | 107351069 | 1.85e-05 | 0.303 | TATTGCAAAAT |
| MA0466.1 | chr10 | − | 47302250 | 47302260 | 1.9e-05 | 0.303 | TATTTCACCAC |
| MA0466.1 | chr1 | − | 176697067 | 176697077 | 1.98e-05 | 0.303 | TATTGCTCAAT |
| MA0466.1 | chr11 | − | 8138555 | 8138565 | 1.98e-05 | 0.303 | TATTGCTCAAT |
| MA0466.1 | chr14 | − | 75637232 | 75637242 | 1.98e-05 | 0.303 | TATTGCTCAAT |
| MA0466.1 | chr14 | + | 103863189 | 103863199 | 1.98e-05 | 0.303 | GATTGCTCAAT |
| MA0466.1 | chr15 | + | 6392537 | 6392547 | 1.98e-05 | 0.303 | GATTGCTCAAT |
| MA0466.1 | chr6 | + | 15843670 | 15843680 | 1.98e-05 | 0.303 | TATTGCTCAAT |
| MA0466.1 | chr8 | + | 79580311 | 79580321 | 1.98e-05 | 0.303 | TATTGCTCAAT |
| MA0466.1 | chr10 | + | 47302399 | 47302409 | 2.14e-05 | 0.311 | TATTTCATAAT |
| MA0466.1 | chr13 | − | 105879504 | 105879514 | 2.14e-05 | 0.311 | GATTTCATAAT |
| MA0466.1 | chr5 | + | 123470554 | 123470564 | 2.14e-05 | 0.311 | TATTTCATAAT |
| MA0466.1 | chr1 | − | 23487725 | 23487735 | 2.23e-05 | 0.313 | AATTGCATCAC |
| MA0466.1 | chr4 | − | 57298001 | 57298011 | 2.23e-05 | 0.313 | CATTGCATCAC |
| MA0466.1 | chr6 | + | 53946747 | 53946757 | 2.31e-05 | 0.313 | TATTGCAACAT |
| MA0466.1 | chr9 | + | 74641384 | 74641394 | 2.31e-05 | 0.313 | GATTGCAACAT |
| MA0466.1 | chr1 | − | 133837705 | 133837715 | 2.36e-05 | 0.313 | TATTGCTCCAT |
| MA0466.1 | chr11 | + | 79374159 | 79374169 | 2.42e-05 | 0.313 | GCTTGCACAAT |
| MA0466.1 | chr12 | + | 105583965 | 105583975 | 2.42e-05 | 0.313 | GCTTGCACAAT |
| MA0466.1 | chr10 | − | 47302456 | 47302466 | 2.57e-05 | 0.317 | GATTGCAAAAC |
| MA0466.1 | chr8 | + | 116633805 | 116633815 | 2.57e-05 | 0.317 | GATTGCAAAAC |
| MA0466.1 | chr7 | + | 126702871 | 126702881 | 2.66e-05 | 0.317 | TATTTCATCAT |
| MA0466.1 | chr8 | + | 47447785 | 47447795 | 2.66e-05 | 0.317 | TATTTCATCAT |
| MA0466.1 | chr9 | − | 9213199 | 9213209 | 2.66e-05 | 0.317 | GATTTCATCAT |
| MA0466.1 | chr3 | + | 18167527 | 18167537 | 2.77e-05 | 0.317 | CGTTGCACAAT |
| MA0466.1 | chr3 | − | 143773891 | 143773901 | 2.77e-05 | 0.317 | TATTGCCCAAT |
| MA0466.1 | chr15 | + | 58974177 | 58974187 | 2.83e-05 | 0.317 | GATTGCTCAAC |
| MA0466.1 | chr7 | + | 138594009 | 138594019 | 2.83e-05 | 0.317 | TATTGCTCAAC |
| MA0466.1 | chr5 | + | 135102831 | 135102841 | 2.92e-05 | 0.317 | GATTTCATAAC |
| MA0466.1 | chr7 | + | 112739345 | 112739355 | 2.97e-05 | 0.317 | TCTTGCACCAT |
| MA0466.1 | chr3 | + | 58312372 | 58312382 | 3.08e-05 | 0.317 | GATTGCAACAC |
| MA0466.1 | chr11 | − | 112582266 | 112582276 | 3.17e-05 | 0.317 | GATTGCCCCAT |
| MA0466.1 | chr8 | + | 46324915 | 46324925 | 3.17e-05 | 0.317 | TATTGCCCCAT |
| MA0466.1 | chr11 | + | 16645088 | 16645098 | 3.21e-05 | 0.317 | TATTGCTCCAC |
| MA0466.1 | chr9 | + | 74698898 | 74698908 | 3.21e-05 | 0.317 | GATTGCTCCAC |
| MA0466.1 | chr10 | + | 24081492 | 24081502 | 3.39e-05 | 0.317 | TATTTCATCAC |
| MA0466.1 | chr15 | − | 66441030 | 66441040 | 3.39e-05 | 0.317 | GATTTCATCAC |
| MA0466.1 | chr18 | + | 59377665 | 59377675 | 3.39e-05 | 0.317 | GATTTCATCAC |
| MA0466.1 | chr2 | + | 147386608 | 147386618 | 3.39e-05 | 0.317 | GATTTCATCAC |
| MA0466.1 | chr3 | + | 97792201 | 97792211 | 3.39e-05 | 0.317 | TATTTCATCAC |
| MA0466.1 | chr9 | − | 112731955 | 112731965 | 3.39e-05 | 0.317 | TATTTCATCAC |
| MA0466.1 | chr18 | + | 33722442 | 33722452 | 3.48e-05 | 0.317 | AGTTGCACAAC |
| MA0466.1 | chr2 | + | 106493605 | 106493615 | 3.48e-05 | 0.317 | AGTTGCACAAC |
| MA0466.1 | chr2 | − | 161191746 | 161191756 | 3.48e-05 | 0.317 | GATTGCCCAAC |
| MA0466.1 | chr4 | + | 96773722 | 96773732 | 3.57e-05 | 0.317 | TATTGCTTAAT |
| MA0466.1 | chr7 | − | 87801547 | 87801557 | 3.57e-05 | 0.317 | TATTGCTTAAT |
| MA0466.1 | chr12 | + | 101097101 | 101097111 | 3.72e-05 | 0.317 | TGTTTCACAAT |
| MA0466.1 | chr17 | + | 85132010 | 85132020 | 3.72e-05 | 0.317 | TGTTTCACAAT |
| MA0466.1 | chr3 | + | 18329115 | 18329125 | 3.72e-05 | 0.317 | TGTTTCACAAT |
| MA0466.1 | chr5 | − | 91416608 | 91416618 | 3.72e-05 | 0.317 | GGTTTCACAAT |
| MA0466.1 | chr13 | + | 3765406 | 3765416 | 3.79e-05 | 0.317 | GATTGCCCCAC |
| MA0466.1 | chr11 | + | 86427543 | 86427553 | 3.96e-05 | 0.317 | CATTTCACAAT |
| MA0466.1 | chr12 | + | 70520313 | 70520323 | 3.96e-05 | 0.317 | GATTGCTTCAT |
| MA0466.1 | chr13 | + | 34204352 | 34204362 | 3.96e-05 | 0.317 | AATTTCACAAT |
| MA0466.1 | chr14 | − | 103863056 | 103863066 | 3.96e-05 | 0.317 | CATTTCACAAT |
| MA0466.1 | chr3 | + | 145486922 | 145486932 | 3.96e-05 | 0.317 | CATTTCACAAT |
| MA0466.1 | chr6 | − | 22440931 | 22440941 | 3.96e-05 | 0.317 | GATTGCTTCAT |
| MA0466.1 | chr9 | + | 122266376 | 122266386 | 3.96e-05 | 0.317 | CATTTCACAAT |
| MA0466.1 | chr10 | − | 106795969 | 106795979 | 4.03e-05 | 0.317 | TCTTGCATAAT |
| MA0466.1 | chr6 | − | 149293066 | 149293076 | 4.03e-05 | 0.317 | GCTTGCATAAT |
| MA0466.1 | chr10 | − | 88860787 | 88860797 | 4.29e-05 | 0.324 | GATTGCTTAAC |
| MA0466.1 | chr18 | + | 33352537 | 33352547 | 4.29e-05 | 0.324 | TATTGCTTAAC |
| MA0466.1 | chr2 | − | 134367892 | 134367902 | 4.29e-05 | 0.324 | TATTGCTTAAC |
| MA0466.1 | chr8 | + | 42196224 | 42196234 | 4.29e-05 | 0.324 | GATTGCTTAAC |
| MA0466.1 | chr17 | + | 85132108 | 85132118 | 4.35e-05 | 0.324 | GGTTTCACCAT |
| MA0466.1 | chr2 | + | 43998395 | 43998405 | 4.35e-05 | 0.324 | TGTTTCACCAT |
| MA0466.1 | chr14 | − | 23610475 | 23610485 | 4.48e-05 | 0.324 | AATTTCACCAT |
| MA0466.1 | chr5 | − | 121026227 | 121026237 | 4.48e-05 | 0.324 | AATTTCACCAT |
| MA0466.1 | chr6 | + | 24158093 | 24158103 | 4.48e-05 | 0.324 | CATTTCACCAT |
| MA0466.1 | chr10 | + | 10565038 | 10565048 | 4.54e-05 | 0.324 | GCTTGCATCAT |
| MA0466.1 | chr3 | + | 18167656 | 18167666 | 4.54e-05 | 0.324 | TCTTGCATCAT |
| MA0466.1 | chr10 | − | 94615457 | 94615467 | 4.59e-05 | 0.325 | TGTTTCACAAC |
| MA0466.1 | chr2 | − | 67807233 | 67807243 | 4.84e-05 | 0.336 | GATTGCCTCAT |
| MA0466.1 | chr7 | + | 146094078 | 146094088 | 4.84e-05 | 0.336 | GATTGCCTCAT |
| MA0466.1 | chr17 | − | 8470199 | 8470209 | 4.97e-05 | 0.339 | GATTGCTTCAC |
| MA0466.1 | chr6 | + | 53946773 | 53946783 | 4.97e-05 | 0.339 | CATTTCACAAC |
| MA0466.1 | chr4 | + | 104512906 | 104512916 | 5.12e-05 | 0.345 | GATTGCACAAG |
| MA0466.1 | chr7 | − | 105673583 | 105673593 | 5.12e-05 | 0.345 | GATTGCACAAG |
| MA0466.1 | chr14 | − | 73534051 | 73534061 | 5.27e-05 | 0.349 | GATTGCCTAAC |
| MA0466.1 | chr2 | + | 106493591 | 106493601 | 5.27e-05 | 0.349 | CGTTGCATAAC |
| MA0466.1 | chr14 | + | 40078503 | 40078513 | 5.34e-05 | 0.351 | TGTTGCAAAAT |
| MA0466.1 | chr4 | − | 52828672 | 52828682 | 5.66e-05 | 0.365 | CATTGCAAAAT |
| MA0466.1 | chr8 | + | 130861041 | 130861051 | 5.66e-05 | 0.365 | TGTTGCTCAAT |
| MA0466.1 | chr18 | + | 81518579 | 81518589 | 5.83e-05 | 0.368 | AATTGCTCAAT |
| MA0466.1 | chr2 | − | 134480839 | 134480849 | 5.83e-05 | 0.368 | CATTGCTCAAT |
| MA0466.1 | chr15 | − | 66876933 | 66876943 | 5.88e-05 | 0.368 | GATTGCACCAG |
| MA0466.1 | chr10 | − | 23974673 | 23974683 | 5.97e-05 | 0.368 | TGTTTCATAAT |
| MA0466.1 | chr10 | − | 121751043 | 121751053 | 6.04e-05 | 0.368 | TATTACACAAC |
| MA0466.1 | chr5 | − | 96735546 | 96735556 | 6.04e-05 | 0.368 | TATTACACAAC |
| MA0466.1 | chr10 | + | 98129101 | 98129111 | 6.41e-05 | 0.368 | AATTTCATAAT |
| MA0466.1 | chr14 | + | 77131557 | 77131567 | 6.41e-05 | 0.368 | TATTTCGCAAT |
| MA0466.1 | chr15 | − | 87060992 | 87061002 | 6.41e-05 | 0.368 | AATTTCATAAT |
| MA0466.1 | chr18 | − | 60368724 | 60368734 | 6.41e-05 | 0.368 | AATTTCATAAT |
| MA0466.1 | chr18 | − | 60392785 | 60392795 | 6.41e-05 | 0.368 | AATTTCATAAT |
| MA0466.1 | chr2 | + | 134582014 | 134582024 | 6.41e-05 | 0.368 | CATTTCATAAT |
| MA0466.1 | chr3 | − | 18198978 | 18198988 | 6.41e-05 | 0.368 | GGTTGCAACAT |
| MA0466.1 | chr3 | − | 145487085 | 145487095 | 6.41e-05 | 0.368 | AATTTCATAAT |
| MA0466.1 | chr4 | + | 11162604 | 11162614 | 6.41e-05 | 0.368 | AATTTCATAAT |
| MA0466.1 | chr7 | + | 27857786 | 27857796 | 6.41e-05 | 0.368 | CATTTCATAAT |
| MA0466.1 | chr2 | + | 134370474 | 134370484 | 6.56e-05 | 0.368 | GGTTGCTCCAT |
| MA0466.1 | chr5 | − | 77532037 | 77532047 | 6.56e-05 | 0.368 | CATTGCAACAT |
| MA0466.1 | chr6 | − | 27776219 | 27776229 | 6.56e-05 | 0.368 | AATTGCAACAT |
| MA0466.1 | chr17 | − | 43447444 | 43447454 | 6.67e-05 | 0.368 | CATTGCTCCAT |
| MA0466.1 | chr3 | − | 80814057 | 80814067 | 6.67e-05 | 0.368 | GGTTGCGTAAT |
| MA0466.1 | chr1 | + | 90645811 | 90645821 | 6.73e-05 | 0.368 | TGTTGCAAAAC |
| MA0466.1 | chr1 | + | 133837611 | 133837621 | 6.86e-05 | 0.368 | CCTTGCACAAT |
| MA0466.1 | chr10 | + | 47372353 | 47372363 | 6.86e-05 | 0.368 | CCTTGCACAAT |
| MA0466.1 | chr2 | − | 73809571 | 73809581 | 6.86e-05 | 0.368 | GGTTTCATCAT |
| MA0466.1 | chr6 | + | 27776439 | 27776449 | 6.86e-05 | 0.368 | TGTTTCATCAT |
| MA0466.1 | chr14 | − | 66335216 | 66335226 | 7.03e-05 | 0.375 | GATTACACCAC |
| MA0466.1 | chr14 | − | 51713502 | 51713512 | 7.15e-05 | 0.375 | CATTGCAAAAC |
| MA0466.1 | chr1 | + | 13797989 | 13797999 | 7.3e-05 | 0.375 | AATTTCATCAT |
| MA0466.1 | chr13 | + | 32285342 | 32285352 | 7.3e-05 | 0.375 | AATTTCATCAT |
| MA0466.1 | chr13 | + | 114877028 | 114877038 | 7.3e-05 | 0.375 | AATTTCATCAT |
| MA0466.1 | chr2 | − | 67807257 | 67807267 | 7.3e-05 | 0.375 | CATTTCATCAT |
| MA0466.1 | chr18 | − | 21129644 | 21129654 | 7.36e-05 | 0.375 | AATTGCCCAAT |
| MA0466.1 | chr18 | + | 64692739 | 64692749 | 7.42e-05 | 0.375 | AATTGCTCAAC |
| MA0466.1 | chr4 | − | 96769641 | 96769651 | 7.42e-05 | 0.375 | AATTGCTCAAC |
| MA0466.1 | chr10 | + | 94615533 | 94615543 | 7.49e-05 | 0.375 | GGTTTCATAAC |
| MA0466.1 | chr10 | − | 110752304 | 110752314 | 7.49e-05 | 0.375 | GGTTTCATAAC |
| MA0466.1 | chr3 | − | 143773857 | 143773867 | 7.61e-05 | 0.375 | TATTACATAAT |
| MA0466.1 | chr5 | + | 102993067 | 102993077 | 7.61e-05 | 0.375 | TATTACATAAT |
| MA0466.1 | chr6 | + | 23997079 | 23997089 | 7.61e-05 | 0.375 | TATTACATAAT |
| MA0466.1 | chr1 | − | 40244911 | 40244921 | 7.85e-05 | 0.382 | AATTTCATAAC |
| MA0466.1 | chr6 | + | 29770483 | 29770493 | 7.85e-05 | 0.382 | CATTTCATAAC |
| MA0466.1 | chr2 | + | 67817764 | 67817774 | 8.02e-05 | 0.383 | TATTTCAAAAT |
| MA0466.1 | chr4 | − | 149708504 | 149708514 | 8.02e-05 | 0.383 | GATTTCAAAAT |
| MA0466.1 | chr6 | − | 15843659 | 15843669 | 8.02e-05 | 0.383 | TATTTCAAAAT |
| MA0466.1 | chr14 | + | 21782337 | 21782347 | 8.27e-05 | 0.389 | TATTGCATAAG |
| MA0466.1 | chr7 | + | 31773713 | 31773723 | 8.27e-05 | 0.389 | CATTGCAACAC |
| MA0466.1 | chr14 | + | 18557815 | 18557825 | 8.37e-05 | 0.389 | TATTTCTCAAT |
| MA0466.1 | chr2 | − | 134367732 | 134367742 | 8.37e-05 | 0.389 | TATTTCTCAAT |
| MA0466.1 | chr7 | − | 19603359 | 19603369 | 8.37e-05 | 0.389 | GATTTCTCAAT |
| MA0466.1 | chr4 | + | 107799278 | 107799288 | 8.41e-05 | 0.389 | AATTGCCCCAT |
| MA0466.1 | chr16 | + | 10649060 | 10649070 | 8.6e-05 | 0.39 | CCTTGCACAAC |
| MA0466.1 | chr16 | − | 87636491 | 87636501 | 8.6e-05 | 0.39 | CCTTGCACAAC |
| MA0466.1 | chr14 | − | 40078831 | 40078841 | 8.78e-05 | 0.39 | TATTACATCAT |
| MA0466.1 | chr16 | − | 43298262 | 43298272 | 8.78e-05 | 0.39 | CATTGCGTAAC |
| MA0466.1 | chr18 | + | 76131001 | 76131011 | 8.78e-05 | 0.39 | GATTACATCAT |
| MA0466.1 | chr3 | − | 14840932 | 14840942 | 8.78e-05 | 0.39 | TGTTGCCCAAC |
| MA0466.1 | chr4 | − | 107796896 | 107796906 | 8.78e-05 | 0.39 | GATTACATCAT |
| MA0466.1 | chr14 | − | 77131558 | 77131568 | 8.93e-05 | 0.39 | GATTGCGAAAT |
| MA0466.1 | chr15 | − | 3558245 | 3558255 | 8.93e-05 | 0.39 | TGTTGCTTAAT |
| MA0466.1 | chr16 | − | 43328526 | 43328536 | 8.93e-05 | 0.39 | TGTTGCTTAAT |
| MA0466.1 | chr1 | − | 191935652 | 191935662 | 9.19e-05 | 0.39 | CATTGCCCAAC |
| MA0466.1 | chr15 | − | 38277797 | 38277807 | 9.19e-05 | 0.39 | GATTTCAACAT |
| MA0466.1 | chr16 | + | 45986677 | 45986687 | 9.19e-05 | 0.39 | AATTGCCCAAC |
| MA0466.1 | chr17 | + | 84720126 | 84720136 | 9.19e-05 | 0.39 | AATTGCCCAAC |
| MA0466.1 | chr3 | + | 15201537 | 15201547 | 9.19e-05 | 0.39 | CATTGCCCAAC |
| MA0466.1 | chr1 | − | 176850722 | 176850732 | 9.28e-05 | 0.39 | CATTGCTTAAT |
| MA0466.1 | chr10 | + | 47373656 | 47373666 | 9.28e-05 | 0.39 | CATTGCTTAAT |
| MA0466.1 | chr11 | − | 115889346 | 115889356 | 9.28e-05 | 0.39 | AATTGCTTAAT |
| MA0466.1 | chr16 | − | 14950859 | 14950869 | 9.41e-05 | 0.393 | TATTTCTCCAT |
| MA0466.1 | chr15 | − | 3670822 | 3670832 | 9.5e-05 | 0.395 | GATTACATAAC |
| MA0466.1 | chr5 | + | 104803430 | 104803440 | 9.61e-05 | 0.395 | GCTTTCACAAT |
| MA0466.1 | chr13 | − | 100436974 | 100436984 | 9.71e-05 | 0.395 | GATTTCGTAAT |
| MA0466.1 | chr1 | + | 23488110 | 23488120 | 9.84e-05 | 0.395 | TATTTCAAAAC |
| MA0466.1 | chr17 | + | 63360338 | 63360348 | 9.84e-05 | 0.395 | TATTTCAAAAC |
| MA0466.1 | chr2 | − | 134581960 | 134581970 | 9.84e-05 | 0.395 | TATTTCAAAAC |
| MA0466.1 | chr3 | + | 58312547 | 58312557 | 9.84e-05 | 0.395 | GATTTCAAAAC |
| MA0466.1 | chr3 | + | 133403543 | 133403553 | 9.84e-05 | 0.395 | GATTTCAAAAC |
| MA0466.1 | chr13 | − | 4050377 | 4050387 | 9.91e-05 | 0.396 | GGTTGCCCCAC |
Command line:
/share/pkg/meme/4.10.0_4/install/bin/fimo --parse-genomic-coord --verbosity 1 --oc Dynamic_Male-biased_Output/fimo_out_6 --bgfile Dynamic_Male-biased_Output/background --motif MA0466.1 ./JASPAR_CORE_2014_vertebrates.meme Dynamic_Male-biased_Output/Dynamic_Male-biased.fa
Settings:
| output directory = Dynamic_Male-biased_Output/fimo_out_6 | MEME file name = ./JASPAR_CORE_2014_vertebrates.meme | sequence file name = Dynamic_Male-biased_Output/Dynamic_Male-biased.fa |
| background file name = Dynamic_Male-biased_Output/background | allow clobber = true | compute q-values = true |
| parse genomic coord. = true | text only = false | scan both strands = true |
| max sequence length = 250000000 | output threshold = 0.0001 | threshold type = p-value |
| max stored scores = 100000 | pseudocount = 0.1 | verbosity = 1 |
| selected motif = MA0466.1 |
This information can be useful in the event you wish to report a problem with the FIMO software.