Database and Motifs High-scoring Motif Occurrences Debugging Information


FIMO - Motif search tool

FIMO version 4.10.0, (Release date: Wed May 21 10:35:36 2014 +1000)

For further information on how to interpret these results or to get a copy of the FIMO software please access http://meme.nbcr.net

If you use FIMO in your research, please cite the following paper:
Charles E. Grant, Timothy L. Bailey, and William Stafford Noble, "FIMO: Scanning for occurrences of a given motif", Bioinformatics, 27(7):1017-1018, 2011. [full text]

DATABASE AND MOTIFS

DATABASE Static_Male-biased_Output/Static_Male-biased.fa
Database contains 1954 sequences, 977000 residues

MOTIFS Static_Male-biased_Output/dreme_out/dreme.xml (nucleotide)

MOTIF WIDTH BEST POSSIBLE MATCH
ATYGATY 7 ATTGATT
TRTTTR 6 TGTTTG
CAAAGKY 7 CAAAGGT
CMSAG 5 CACAG
CCWGGAA 7 CCTGGAA
CACGKG 6 CACGTG
TGGCW 5 TGGCA
AATAAAW 7 AATAAAA
CCCWCCCC 8 CCCTCCCC
TGACCTW 7 TGACCTT

Random model letter frequencies (from Static_Male-biased_Output/background):
A 0.274 C 0.227 G 0.227 T 0.274

SECTION I: HIGH-SCORING MOTIF OCCURRENCES
Motif Sequence Name Strand Start End p-value q-value Matched Sequence
CCWGGAA chr1 + 9555419 9555425 5.38e-05 0.244 CCTGGAA
CCWGGAA chr1 − 74770691 74770697 5.38e-05 0.244 CCTGGAA
CCWGGAA chr1 − 75118239 75118245 5.38e-05 0.244 CCTGGAA
CCWGGAA chr1 − 90658110 90658116 5.38e-05 0.244 CCTGGAA
CCWGGAA chr1 + 102278917 102278923 5.38e-05 0.244 CCTGGAA
CCWGGAA chr1 + 102281911 102281917 5.38e-05 0.244 CCTGGAA
CCWGGAA chr1 − 165747799 165747805 5.38e-05 0.244 CCTGGAA
CCWGGAA chr1 − 166617897 166617903 5.38e-05 0.244 CCTGGAA
CCWGGAA chr1 + 166617998 166618004 5.38e-05 0.244 CCTGGAA
CCWGGAA chr1 + 180714802 180714808 5.38e-05 0.244 CCTGGAA
CCWGGAA chr1 + 180715079 180715085 5.38e-05 0.244 CCTGGAA
CCWGGAA chr1 + 180715201 180715207 5.38e-05 0.244 CCTGGAA
CCWGGAA chr1 + 185778754 185778760 5.38e-05 0.244 CCTGGAA
CCWGGAA chr1 + 188498688 188498694 5.38e-05 0.244 CCTGGAA
CCWGGAA chr1 − 188508128 188508134 5.38e-05 0.244 CCTGGAA
CCWGGAA chr1 − 193746015 193746021 5.38e-05 0.244 CCTGGAA
CCWGGAA chr1 − 197048108 197048114 5.38e-05 0.244 CCTGGAA
CCWGGAA chr10 + 15469023 15469029 5.38e-05 0.244 CCTGGAA
CCWGGAA chr10 − 16349025 16349031 5.38e-05 0.244 CCTGGAA
CCWGGAA chr10 + 38936319 38936325 5.38e-05 0.244 CCTGGAA
CCWGGAA chr10 + 39154322 39154328 5.38e-05 0.244 CCTGGAA
CCWGGAA chr10 + 39154392 39154398 5.38e-05 0.244 CCTGGAA
CCWGGAA chr10 − 39772237 39772243 5.38e-05 0.244 CCTGGAA
CCWGGAA chr10 + 56806793 56806799 5.38e-05 0.244 CCTGGAA
CCWGGAA chr10 − 62584295 62584301 5.38e-05 0.244 CCTGGAA
CCWGGAA chr10 + 67737360 67737366 5.38e-05 0.244 CCTGGAA
CCWGGAA chr10 + 85626751 85626757 5.38e-05 0.244 CCTGGAA
CCWGGAA chr10 − 86495687 86495693 5.38e-05 0.244 CCTGGAA
CCWGGAA chr10 − 92642883 92642889 5.38e-05 0.244 CCTGGAA
CCWGGAA chr10 + 98612175 98612181 5.38e-05 0.244 CCTGGAA
CCWGGAA chr10 − 107946945 107946951 5.38e-05 0.244 CCTGGAA
CCWGGAA chr10 − 111035499 111035505 5.38e-05 0.244 CCTGGAA
CCWGGAA chr10 + 120927178 120927184 5.38e-05 0.244 CCTGGAA
CCWGGAA chr10 + 121906914 121906920 5.38e-05 0.244 CCTGGAA
CCWGGAA chr11 + 7716021 7716027 5.38e-05 0.244 CCTGGAA
CCWGGAA chr11 + 16680243 16680249 5.38e-05 0.244 CCTGGAA
CCWGGAA chr11 + 16681688 16681694 5.38e-05 0.244 CCTGGAA
CCWGGAA chr11 − 16717377 16717383 5.38e-05 0.244 CCTGGAA
CCWGGAA chr11 − 16738982 16738988 5.38e-05 0.244 CCTGGAA
CCWGGAA chr11 − 16744264 16744270 5.38e-05 0.244 CCTGGAA
CCWGGAA chr11 − 16759237 16759243 5.38e-05 0.244 CCTGGAA
CCWGGAA chr11 − 16761509 16761515 5.38e-05 0.244 CCTGGAA
CCWGGAA chr11 + 16761980 16761986 5.38e-05 0.244 CCTGGAA
CCWGGAA chr11 + 16804318 16804324 5.38e-05 0.244 CCTGGAA
CCWGGAA chr11 − 20901461 20901467 5.38e-05 0.244 CCTGGAA
CCWGGAA chr11 + 77918072 77918078 5.38e-05 0.244 CCTGGAA
CCWGGAA chr11 + 81302327 81302333 5.38e-05 0.244 CCTGGAA
CCWGGAA chr11 + 84004506 84004512 5.38e-05 0.244 CCTGGAA
CCWGGAA chr11 − 86388040 86388046 5.38e-05 0.244 CCTGGAA
CCWGGAA chr11 + 97692714 97692720 5.38e-05 0.244 CCTGGAA
CCWGGAA chr11 + 101204343 101204349 5.38e-05 0.244 CCTGGAA
CCWGGAA chr11 + 106529538 106529544 5.38e-05 0.244 CCTGGAA
CCWGGAA chr11 − 111101118 111101124 5.38e-05 0.244 CCTGGAA
CCWGGAA chr11 + 113480373 113480379 5.38e-05 0.244 CCTGGAA
CCWGGAA chr12 − 3537583 3537589 5.38e-05 0.244 CCTGGAA
CCWGGAA chr12 + 3537600 3537606 5.38e-05 0.244 CCTGGAA
CCWGGAA chr12 + 3703027 3703033 5.38e-05 0.244 CCTGGAA
CCWGGAA chr12 − 8223790 8223796 5.38e-05 0.244 CCTGGAA
CCWGGAA chr12 + 8541993 8541999 5.38e-05 0.244 CCTGGAA
CCWGGAA chr12 − 10574693 10574699 5.38e-05 0.244 CCTGGAA
CCWGGAA chr12 + 10574702 10574708 5.38e-05 0.244 CCTGGAA
CCWGGAA chr12 + 16591909 16591915 5.38e-05 0.244 CCTGGAA
CCWGGAA chr12 + 33374145 33374151 5.38e-05 0.244 CCTGGAA
CCWGGAA chr12 − 40823864 40823870 5.38e-05 0.244 CCTGGAA
CCWGGAA chr12 − 52971009 52971015 5.38e-05 0.244 CCTGGAA
CCWGGAA chr12 + 72819989 72819995 5.38e-05 0.244 CCTGGAA
CCWGGAA chr12 − 76795329 76795335 5.38e-05 0.244 CCTGGAA
CCWGGAA chr12 − 80505176 80505182 5.38e-05 0.244 CCTGGAA
CCWGGAA chr12 + 86683666 86683672 5.38e-05 0.244 CCTGGAA
CCWGGAA chr12 − 104903594 104903600 5.38e-05 0.244 CCTGGAA
CCWGGAA chr12 + 105266434 105266440 5.38e-05 0.244 CCTGGAA
CCWGGAA chr13 + 7352249 7352255 5.38e-05 0.244 CCTGGAA
CCWGGAA chr13 + 12643009 12643015 5.38e-05 0.244 CCTGGAA
CCWGGAA chr13 − 16794563 16794569 5.38e-05 0.244 CCTGGAA
CCWGGAA chr13 + 21116244 21116250 5.38e-05 0.244 CCTGGAA
CCWGGAA chr13 + 24408776 24408782 5.38e-05 0.244 CCTGGAA
CCWGGAA chr13 + 24457287 24457293 5.38e-05 0.244 CCTGGAA
CCWGGAA chr13 + 24457302 24457308 5.38e-05 0.244 CCTGGAA
CCWGGAA chr13 + 31603090 31603096 5.38e-05 0.244 CCTGGAA
CCWGGAA chr13 − 35108202 35108208 5.38e-05 0.244 CCTGGAA
CCWGGAA chr13 + 36418873 36418879 5.38e-05 0.244 CCTGGAA
CCWGGAA chr13 − 43465177 43465183 5.38e-05 0.244 CCTGGAA
CCWGGAA chr13 − 52286654 52286660 5.38e-05 0.244 CCTGGAA
CCWGGAA chr13 − 52287054 52287060 5.38e-05 0.244 CCTGGAA
CCWGGAA chr13 − 54925959 54925965 5.38e-05 0.244 CCTGGAA
CCWGGAA chr13 − 74161070 74161076 5.38e-05 0.244 CCTGGAA
CCWGGAA chr13 + 95023024 95023030 5.38e-05 0.244 CCTGGAA
CCWGGAA chr13 + 102549272 102549278 5.38e-05 0.244 CCTGGAA
CCWGGAA chr13 + 104076052 104076058 5.38e-05 0.244 CCTGGAA
CCWGGAA chr13 − 108432141 108432147 5.38e-05 0.244 CCTGGAA
CCWGGAA chr13 − 111502936 111502942 5.38e-05 0.244 CCTGGAA
CCWGGAA chr13 − 112695641 112695647 5.38e-05 0.244 CCTGGAA
CCWGGAA chr13 − 112695767 112695773 5.38e-05 0.244 CCTGGAA
CCWGGAA chr13 − 114890552 114890558 5.38e-05 0.244 CCTGGAA
CCWGGAA chr13 − 115281352 115281358 5.38e-05 0.244 CCTGGAA
CCWGGAA chr14 − 11964733 11964739 5.38e-05 0.244 CCTGGAA
CCWGGAA chr14 + 12591769 12591775 5.38e-05 0.244 CCTGGAA
CCWGGAA chr14 − 18520135 18520141 5.38e-05 0.244 CCTGGAA
CCWGGAA chr14 + 18519954 18519960 5.38e-05 0.244 CCTGGAA
CCWGGAA chr14 + 21012645 21012651 5.38e-05 0.244 CCTGGAA
CCWGGAA chr14 − 21138830 21138836 5.38e-05 0.244 CCTGGAA
CCWGGAA chr14 − 29474827 29474833 5.38e-05 0.244 CCTGGAA
CCWGGAA chr14 − 29474987 29474993 5.38e-05 0.244 CCTGGAA
CCWGGAA chr14 − 31489459 31489465 5.38e-05 0.244 CCTGGAA
CCWGGAA chr14 + 51763079 51763085 5.38e-05 0.244 CCTGGAA
CCWGGAA chr14 − 65143270 65143276 5.38e-05 0.244 CCTGGAA
CCWGGAA chr14 − 65474268 65474274 5.38e-05 0.244 CCTGGAA
CCWGGAA chr14 − 66340509 66340515 5.38e-05 0.244 CCTGGAA
CCWGGAA chr14 − 66355244 66355250 5.38e-05 0.244 CCTGGAA
CCWGGAA chr14 − 66360962 66360968 5.38e-05 0.244 CCTGGAA
CCWGGAA chr14 − 66378356 66378362 5.38e-05 0.244 CCTGGAA
CCWGGAA chr14 + 66392041 66392047 5.38e-05 0.244 CCTGGAA
CCWGGAA chr14 − 66408101 66408107 5.38e-05 0.244 CCTGGAA
CCWGGAA chr14 − 66752089 66752095 5.38e-05 0.244 CCTGGAA
CCWGGAA chr14 − 75454563 75454569 5.38e-05 0.244 CCTGGAA
CCWGGAA chr14 − 75454775 75454781 5.38e-05 0.244 CCTGGAA
CCWGGAA chr14 − 87162273 87162279 5.38e-05 0.244 CCTGGAA
CCWGGAA chr14 − 118408747 118408753 5.38e-05 0.244 CCTGGAA
CCWGGAA chr14 + 120235095 120235101 5.38e-05 0.244 CCTGGAA
CCWGGAA chr14 − 120664929 120664935 5.38e-05 0.244 CCTGGAA
CCWGGAA chr14 + 121604288 121604294 5.38e-05 0.244 CCTGGAA
CCWGGAA chr15 − 3448133 3448139 5.38e-05 0.244 CCTGGAA
CCWGGAA chr15 − 4628466 4628472 5.38e-05 0.244 CCTGGAA
CCWGGAA chr15 + 6187897 6187903 5.38e-05 0.244 CCTGGAA
CCWGGAA chr15 − 6396845 6396851 5.38e-05 0.244 CCTGGAA
CCWGGAA chr15 − 7197412 7197418 5.38e-05 0.244 CCTGGAA
CCWGGAA chr15 + 7201736 7201742 5.38e-05 0.244 CCTGGAA
CCWGGAA chr15 + 24999656 24999662 5.38e-05 0.244 CCTGGAA
CCWGGAA chr15 − 27563970 27563976 5.38e-05 0.244 CCTGGAA
CCWGGAA chr15 − 33632058 33632064 5.38e-05 0.244 CCTGGAA
CCWGGAA chr15 + 33632181 33632187 5.38e-05 0.244 CCTGGAA
CCWGGAA chr15 + 37736352 37736358 5.38e-05 0.244 CCTGGAA
CCWGGAA chr15 + 38352733 38352739 5.38e-05 0.244 CCTGGAA
CCWGGAA chr15 + 38522616 38522622 5.38e-05 0.244 CCTGGAA
CCWGGAA chr15 − 41672603 41672609 5.38e-05 0.244 CCTGGAA
CCWGGAA chr15 − 42724455 42724461 5.38e-05 0.244 CCTGGAA
CCWGGAA chr15 + 77429111 77429117 5.38e-05 0.244 CCTGGAA
CCWGGAA chr15 + 81084175 81084181 5.38e-05 0.244 CCTGGAA
CCWGGAA chr15 + 81084304 81084310 5.38e-05 0.244 CCTGGAA
CCWGGAA chr15 − 81196868 81196874 5.38e-05 0.244 CCTGGAA
CCWGGAA chr15 + 82224011 82224017 5.38e-05 0.244 CCTGGAA
CCWGGAA chr15 − 82466326 82466332 5.38e-05 0.244 CCTGGAA
CCWGGAA chr15 + 88726958 88726964 5.38e-05 0.244 CCTGGAA
CCWGGAA chr15 + 95580364 95580370 5.38e-05 0.244 CCTGGAA
CCWGGAA chr15 − 97154295 97154301 5.38e-05 0.244 CCTGGAA
CCWGGAA chr16 + 11407675 11407681 5.38e-05 0.244 CCTGGAA
CCWGGAA chr16 + 13774684 13774690 5.38e-05 0.244 CCTGGAA
CCWGGAA chr16 − 18403826 18403832 5.38e-05 0.244 CCTGGAA
CCWGGAA chr16 − 18408738 18408744 5.38e-05 0.244 CCTGGAA
CCWGGAA chr16 − 26691830 26691836 5.38e-05 0.244 CCTGGAA
CCWGGAA chr16 − 30000193 30000199 5.38e-05 0.244 CCTGGAA
CCWGGAA chr16 + 46097748 46097754 5.38e-05 0.244 CCTGGAA
CCWGGAA chr16 + 52250376 52250382 5.38e-05 0.244 CCTGGAA
CCWGGAA chr16 + 87690926 87690932 5.38e-05 0.244 CCTGGAA
CCWGGAA chr16 + 88583950 88583956 5.38e-05 0.244 CCTGGAA
CCWGGAA chr16 − 98014555 98014561 5.38e-05 0.244 CCTGGAA
CCWGGAA chr17 − 25069403 25069409 5.38e-05 0.244 CCTGGAA
CCWGGAA chr17 − 26719550 26719556 5.38e-05 0.244 CCTGGAA
CCWGGAA chr17 + 26743820 26743826 5.38e-05 0.244 CCTGGAA
CCWGGAA chr17 + 27122782 27122788 5.38e-05 0.244 CCTGGAA
CCWGGAA chr17 − 27773663 27773669 5.38e-05 0.244 CCTGGAA
CCWGGAA chr17 − 29279023 29279029 5.38e-05 0.244 CCTGGAA
CCWGGAA chr17 − 29279030 29279036 5.38e-05 0.244 CCTGGAA
CCWGGAA chr17 − 30791314 30791320 5.38e-05 0.244 CCTGGAA
CCWGGAA chr17 − 34961176 34961182 5.38e-05 0.244 CCTGGAA
CCWGGAA chr17 − 46605346 46605352 5.38e-05 0.244 CCTGGAA
CCWGGAA chr17 + 60648898 60648904 5.38e-05 0.244 CCTGGAA
CCWGGAA chr17 − 75722424 75722430 5.38e-05 0.244 CCTGGAA
CCWGGAA chr17 − 77996278 77996284 5.38e-05 0.244 CCTGGAA
CCWGGAA chr17 + 83648192 83648198 5.38e-05 0.244 CCTGGAA
CCWGGAA chr18 − 7666032 7666038 5.38e-05 0.244 CCTGGAA
CCWGGAA chr18 − 7666400 7666406 5.38e-05 0.244 CCTGGAA
CCWGGAA chr18 − 9672464 9672470 5.38e-05 0.244 CCTGGAA
CCWGGAA chr18 + 12683070 12683076 5.38e-05 0.244 CCTGGAA
CCWGGAA chr18 − 12797879 12797885 5.38e-05 0.244 CCTGGAA
CCWGGAA chr18 − 12836377 12836383 5.38e-05 0.244 CCTGGAA
CCWGGAA chr18 + 12845452 12845458 5.38e-05 0.244 CCTGGAA
CCWGGAA chr18 + 12853777 12853783 5.38e-05 0.244 CCTGGAA
CCWGGAA chr18 − 12857144 12857150 5.38e-05 0.244 CCTGGAA
CCWGGAA chr18 − 12866292 12866298 5.38e-05 0.244 CCTGGAA
CCWGGAA chr18 + 12872917 12872923 5.38e-05 0.244 CCTGGAA
CCWGGAA chr18 + 12887414 12887420 5.38e-05 0.244 CCTGGAA
CCWGGAA chr18 − 15496552 15496558 5.38e-05 0.244 CCTGGAA
CCWGGAA chr18 − 32126298 32126304 5.38e-05 0.244 CCTGGAA
CCWGGAA chr18 − 39875350 39875356 5.38e-05 0.244 CCTGGAA
CCWGGAA chr18 + 43023736 43023742 5.38e-05 0.244 CCTGGAA
CCWGGAA chr18 − 43506896 43506902 5.38e-05 0.244 CCTGGAA
CCWGGAA chr18 − 55342823 55342829 5.38e-05 0.244 CCTGGAA
CCWGGAA chr18 − 56556562 56556568 5.38e-05 0.244 CCTGGAA
CCWGGAA chr18 − 64689487 64689493 5.38e-05 0.244 CCTGGAA
CCWGGAA chr18 − 64766193 64766199 5.38e-05 0.244 CCTGGAA
CCWGGAA chr18 − 75688306 75688312 5.38e-05 0.244 CCTGGAA
CCWGGAA chr18 − 75688431 75688437 5.38e-05 0.244 CCTGGAA
CCWGGAA chr18 − 80434428 80434434 5.38e-05 0.244 CCTGGAA
CCWGGAA chr18 − 81460792 81460798 5.38e-05 0.244 CCTGGAA
CCWGGAA chr18 − 90756421 90756427 5.38e-05 0.244 CCTGGAA
CCWGGAA chr18 − 90756467 90756473 5.38e-05 0.244 CCTGGAA
CCWGGAA chr18 + 90756621 90756627 5.38e-05 0.244 CCTGGAA
CCWGGAA chr19 + 3691523 3691529 5.38e-05 0.244 CCTGGAA
CCWGGAA chr19 + 4045922 4045928 5.38e-05 0.244 CCTGGAA
CCWGGAA chr19 + 12069288 12069294 5.38e-05 0.244 CCTGGAA
CCWGGAA chr19 + 20525915 20525921 5.38e-05 0.244 CCTGGAA
CCWGGAA chr19 − 21372361 21372367 5.38e-05 0.244 CCTGGAA
CCWGGAA chr19 + 21371924 21371930 5.38e-05 0.244 CCTGGAA
CCWGGAA chr19 + 21715915 21715921 5.38e-05 0.244 CCTGGAA
CCWGGAA chr19 + 22124053 22124059 5.38e-05 0.244 CCTGGAA
CCWGGAA chr19 + 23131747 23131753 5.38e-05 0.244 CCTGGAA
CCWGGAA chr19 + 23143233 23143239 5.38e-05 0.244 CCTGGAA
CCWGGAA chr19 − 23200603 23200609 5.38e-05 0.244 CCTGGAA
CCWGGAA chr19 + 23200519 23200525 5.38e-05 0.244 CCTGGAA
CCWGGAA chr19 + 29192799 29192805 5.38e-05 0.244 CCTGGAA
CCWGGAA chr19 + 41363879 41363885 5.38e-05 0.244 CCTGGAA
CCWGGAA chr19 + 41364082 41364088 5.38e-05 0.244 CCTGGAA
CCWGGAA chr19 + 46174568 46174574 5.38e-05 0.244 CCTGGAA
CCWGGAA chr19 − 49434978 49434984 5.38e-05 0.244 CCTGGAA
CCWGGAA chr19 + 58478414 58478420 5.38e-05 0.244 CCTGGAA
CCWGGAA chr19 + 58478497 58478503 5.38e-05 0.244 CCTGGAA
CCWGGAA chr2 − 3550456 3550462 5.38e-05 0.244 CCTGGAA
CCWGGAA chr2 − 4467618 4467624 5.38e-05 0.244 CCTGGAA
CCWGGAA chr2 + 5531418 5531424 5.38e-05 0.244 CCTGGAA
CCWGGAA chr2 − 11324329 11324335 5.38e-05 0.244 CCTGGAA
CCWGGAA chr2 − 11329242 11329248 5.38e-05 0.244 CCTGGAA
CCWGGAA chr2 − 12808770 12808776 5.38e-05 0.244 CCTGGAA
CCWGGAA chr2 + 18341757 18341763 5.38e-05 0.244 CCTGGAA
CCWGGAA chr2 − 26481831 26481837 5.38e-05 0.244 CCTGGAA
CCWGGAA chr2 + 27571002 27571008 5.38e-05 0.244 CCTGGAA
CCWGGAA chr2 + 30568749 30568755 5.38e-05 0.244 CCTGGAA
CCWGGAA chr2 − 31798766 31798772 5.38e-05 0.244 CCTGGAA
CCWGGAA chr2 − 50893699 50893705 5.38e-05 0.244 CCTGGAA
CCWGGAA chr2 + 61370839 61370845 5.38e-05 0.244 CCTGGAA
CCWGGAA chr2 − 62765455 62765461 5.38e-05 0.244 CCTGGAA
CCWGGAA chr2 − 64279503 64279509 5.38e-05 0.244 CCTGGAA
CCWGGAA chr2 − 71988829 71988835 5.38e-05 0.244 CCTGGAA
CCWGGAA chr2 − 72651714 72651720 5.38e-05 0.244 CCTGGAA
CCWGGAA chr2 − 73254076 73254082 5.38e-05 0.244 CCTGGAA
CCWGGAA chr2 − 83673165 83673171 5.38e-05 0.244 CCTGGAA
CCWGGAA chr2 − 91590457 91590463 5.38e-05 0.244 CCTGGAA
CCWGGAA chr2 − 109524455 109524461 5.38e-05 0.244 CCTGGAA
CCWGGAA chr2 − 118489700 118489706 5.38e-05 0.244 CCTGGAA
CCWGGAA chr2 − 124930362 124930368 5.38e-05 0.244 CCTGGAA
CCWGGAA chr2 + 155521206 155521212 5.38e-05 0.244 CCTGGAA
CCWGGAA chr2 + 156312195 156312201 5.38e-05 0.244 CCTGGAA
CCWGGAA chr2 − 163134334 163134340 5.38e-05 0.244 CCTGGAA
CCWGGAA chr2 + 164832451 164832457 5.38e-05 0.244 CCTGGAA
CCWGGAA chr2 − 165229714 165229720 5.38e-05 0.244 CCTGGAA
CCWGGAA chr2 + 167261337 167261343 5.38e-05 0.244 CCTGGAA
CCWGGAA chr2 − 168900855 168900861 5.38e-05 0.244 CCTGGAA
CCWGGAA chr3 + 21772143 21772149 5.38e-05 0.244 CCTGGAA
CCWGGAA chr3 − 23657708 23657714 5.38e-05 0.244 CCTGGAA
CCWGGAA chr3 − 26503922 26503928 5.38e-05 0.244 CCTGGAA
CCWGGAA chr3 − 31293206 31293212 5.38e-05 0.244 CCTGGAA
CCWGGAA chr3 + 32474299 32474305 5.38e-05 0.244 CCTGGAA
CCWGGAA chr3 + 43858935 43858941 5.38e-05 0.244 CCTGGAA
CCWGGAA chr3 + 51548312 51548318 5.38e-05 0.244 CCTGGAA
CCWGGAA chr3 + 67328067 67328073 5.38e-05 0.244 CCTGGAA
CCWGGAA chr3 − 67362555 67362561 5.38e-05 0.244 CCTGGAA
CCWGGAA chr3 + 75707091 75707097 5.38e-05 0.244 CCTGGAA
CCWGGAA chr3 − 88914186 88914192 5.38e-05 0.244 CCTGGAA
CCWGGAA chr3 + 88914036 88914042 5.38e-05 0.244 CCTGGAA
CCWGGAA chr3 + 91285731 91285737 5.38e-05 0.244 CCTGGAA
CCWGGAA chr3 − 94162122 94162128 5.38e-05 0.244 CCTGGAA
CCWGGAA chr3 − 94162305 94162311 5.38e-05 0.244 CCTGGAA
CCWGGAA chr3 − 94500494 94500500 5.38e-05 0.244 CCTGGAA
CCWGGAA chr3 + 94508303 94508309 5.38e-05 0.244 CCTGGAA
CCWGGAA chr3 − 94508941 94508947 5.38e-05 0.244 CCTGGAA
CCWGGAA chr3 + 94512795 94512801 5.38e-05 0.244 CCTGGAA
CCWGGAA chr3 − 96451285 96451291 5.38e-05 0.244 CCTGGAA
CCWGGAA chr3 − 104414833 104414839 5.38e-05 0.244 CCTGGAA
CCWGGAA chr3 + 107118024 107118030 5.38e-05 0.244 CCTGGAA
CCWGGAA chr3 + 112548324 112548330 5.38e-05 0.244 CCTGGAA
CCWGGAA chr3 − 116618108 116618114 5.38e-05 0.244 CCTGGAA
CCWGGAA chr3 + 119217182 119217188 5.38e-05 0.244 CCTGGAA
CCWGGAA chr3 + 122669198 122669204 5.38e-05 0.244 CCTGGAA
CCWGGAA chr3 + 129038888 129038894 5.38e-05 0.244 CCTGGAA
CCWGGAA chr3 − 135171415 135171421 5.38e-05 0.244 CCTGGAA
CCWGGAA chr3 + 135171297 135171303 5.38e-05 0.244 CCTGGAA
CCWGGAA chr3 − 138010090 138010096 5.38e-05 0.244 CCTGGAA
CCWGGAA chr3 + 148505497 148505503 5.38e-05 0.244 CCTGGAA
CCWGGAA chr4 − 32874239 32874245 5.38e-05 0.244 CCTGGAA
CCWGGAA chr4 − 44990345 44990351 5.38e-05 0.244 CCTGGAA
CCWGGAA chr4 + 57135225 57135231 5.38e-05 0.244 CCTGGAA
CCWGGAA chr4 + 62913327 62913333 5.38e-05 0.244 CCTGGAA
CCWGGAA chr4 − 75861458 75861464 5.38e-05 0.244 CCTGGAA
CCWGGAA chr4 + 103123228 103123234 5.38e-05 0.244 CCTGGAA
CCWGGAA chr4 − 104443019 104443025 5.38e-05 0.244 CCTGGAA
CCWGGAA chr4 − 104762163 104762169 5.38e-05 0.244 CCTGGAA
CCWGGAA chr4 + 107731505 107731511 5.38e-05 0.244 CCTGGAA
CCWGGAA chr4 − 107744680 107744686 5.38e-05 0.244 CCTGGAA
CCWGGAA chr4 + 107745059 107745065 5.38e-05 0.244 CCTGGAA
CCWGGAA chr4 + 107771746 107771752 5.38e-05 0.244 CCTGGAA
CCWGGAA chr4 − 107780998 107781004 5.38e-05 0.244 CCTGGAA
CCWGGAA chr4 + 114794259 114794265 5.38e-05 0.244 CCTGGAA
CCWGGAA chr4 − 114952855 114952861 5.38e-05 0.244 CCTGGAA
CCWGGAA chr4 + 117621340 117621346 5.38e-05 0.244 CCTGGAA
CCWGGAA chr4 + 117805026 117805032 5.38e-05 0.244 CCTGGAA
CCWGGAA chr4 − 120461611 120461617 5.38e-05 0.244 CCTGGAA
CCWGGAA chr4 + 123135144 123135150 5.38e-05 0.244 CCTGGAA
CCWGGAA chr4 − 123924225 123924231 5.38e-05 0.244 CCTGGAA
CCWGGAA chr4 + 128787975 128787981 5.38e-05 0.244 CCTGGAA
CCWGGAA chr4 − 129008580 129008586 5.38e-05 0.244 CCTGGAA
CCWGGAA chr4 − 129019626 129019632 5.38e-05 0.244 CCTGGAA
CCWGGAA chr4 + 134453116 134453122 5.38e-05 0.244 CCTGGAA
CCWGGAA chr4 − 141083457 141083463 5.38e-05 0.244 CCTGGAA
CCWGGAA chr4 − 152376926 152376932 5.38e-05 0.244 CCTGGAA
CCWGGAA chr4 − 154690930 154690936 5.38e-05 0.244 CCTGGAA
CCWGGAA chr5 − 28420514 28420520 5.38e-05 0.244 CCTGGAA
CCWGGAA chr5 − 53605766 53605772 5.38e-05 0.244 CCTGGAA
CCWGGAA chr5 − 65101814 65101820 5.38e-05 0.244 CCTGGAA
CCWGGAA chr5 − 81942663 81942669 5.38e-05 0.244 CCTGGAA
CCWGGAA chr5 + 87448828 87448834 5.38e-05 0.244 CCTGGAA
CCWGGAA chr5 + 91328741 91328747 5.38e-05 0.244 CCTGGAA
CCWGGAA chr5 + 99420863 99420869 5.38e-05 0.244 CCTGGAA
CCWGGAA chr5 + 106568828 106568834 5.38e-05 0.244 CCTGGAA
CCWGGAA chr5 − 113558745 113558751 5.38e-05 0.244 CCTGGAA
CCWGGAA chr5 + 117744099 117744105 5.38e-05 0.244 CCTGGAA
CCWGGAA chr5 + 123112942 123112948 5.38e-05 0.244 CCTGGAA
CCWGGAA chr5 + 124005255 124005261 5.38e-05 0.244 CCTGGAA
CCWGGAA chr5 + 124006604 124006610 5.38e-05 0.244 CCTGGAA
CCWGGAA chr5 − 137838988 137838994 5.38e-05 0.244 CCTGGAA
CCWGGAA chr5 − 138523872 138523878 5.38e-05 0.244 CCTGGAA
CCWGGAA chr5 − 139804793 139804799 5.38e-05 0.244 CCTGGAA
CCWGGAA chr5 + 139809505 139809511 5.38e-05 0.244 CCTGGAA
CCWGGAA chr6 + 17009578 17009584 5.38e-05 0.244 CCTGGAA
CCWGGAA chr6 + 17202189 17202195 5.38e-05 0.244 CCTGGAA
CCWGGAA chr6 − 23596434 23596440 5.38e-05 0.244 CCTGGAA
CCWGGAA chr6 + 23596471 23596477 5.38e-05 0.244 CCTGGAA
CCWGGAA chr6 + 34421681 34421687 5.38e-05 0.244 CCTGGAA
CCWGGAA chr6 + 34421914 34421920 5.38e-05 0.244 CCTGGAA
CCWGGAA chr6 − 50681374 50681380 5.38e-05 0.244 CCTGGAA
CCWGGAA chr6 + 50684682 50684688 5.38e-05 0.244 CCTGGAA
CCWGGAA chr6 + 51956726 51956732 5.38e-05 0.244 CCTGGAA
CCWGGAA chr6 + 71144413 71144419 5.38e-05 0.244 CCTGGAA
CCWGGAA chr6 − 85772054 85772060 5.38e-05 0.244 CCTGGAA
CCWGGAA chr6 + 89810049 89810055 5.38e-05 0.244 CCTGGAA
CCWGGAA chr6 + 89810109 89810115 5.38e-05 0.244 CCTGGAA
CCWGGAA chr6 − 94501493 94501499 5.38e-05 0.244 CCTGGAA
CCWGGAA chr6 − 115369387 115369393 5.38e-05 0.244 CCTGGAA
CCWGGAA chr6 − 117226588 117226594 5.38e-05 0.244 CCTGGAA
CCWGGAA chr6 − 118356418 118356424 5.38e-05 0.244 CCTGGAA
CCWGGAA chr6 + 119303478 119303484 5.38e-05 0.244 CCTGGAA
CCWGGAA chr6 + 121003791 121003797 5.38e-05 0.244 CCTGGAA
CCWGGAA chr6 + 122548752 122548758 5.38e-05 0.244 CCTGGAA
CCWGGAA chr6 − 124459316 124459322 5.38e-05 0.244 CCTGGAA
CCWGGAA chr6 − 124459345 124459351 5.38e-05 0.244 CCTGGAA
CCWGGAA chr6 + 126995476 126995482 5.38e-05 0.244 CCTGGAA
CCWGGAA chr6 + 134467672 134467678 5.38e-05 0.244 CCTGGAA
CCWGGAA chr6 − 135026051 135026057 5.38e-05 0.244 CCTGGAA
CCWGGAA chr6 + 141723001 141723007 5.38e-05 0.244 CCTGGAA
CCWGGAA chr6 + 142476660 142476666 5.38e-05 0.244 CCTGGAA
CCWGGAA chr6 − 144877795 144877801 5.38e-05 0.244 CCTGGAA
CCWGGAA chr6 − 147782238 147782244 5.38e-05 0.244 CCTGGAA
CCWGGAA chr6 + 149117417 149117423 5.38e-05 0.244 CCTGGAA
CCWGGAA chr7 − 31502383 31502389 5.38e-05 0.244 CCTGGAA
CCWGGAA chr7 − 47064360 47064366 5.38e-05 0.244 CCTGGAA
CCWGGAA chr7 − 54010384 54010390 5.38e-05 0.244 CCTGGAA
CCWGGAA chr7 − 56100897 56100903 5.38e-05 0.244 CCTGGAA
CCWGGAA chr7 + 56678669 56678675 5.38e-05 0.244 CCTGGAA
CCWGGAA chr7 − 56685156 56685162 5.38e-05 0.244 CCTGGAA
CCWGGAA chr7 + 74313312 74313318 5.38e-05 0.244 CCTGGAA
CCWGGAA chr7 + 75455309 75455315 5.38e-05 0.244 CCTGGAA
CCWGGAA chr7 − 76062242 76062248 5.38e-05 0.244 CCTGGAA
CCWGGAA chr7 + 77661757 77661763 5.38e-05 0.244 CCTGGAA
CCWGGAA chr7 − 77721934 77721940 5.38e-05 0.244 CCTGGAA
CCWGGAA chr7 − 79433414 79433420 5.38e-05 0.244 CCTGGAA
CCWGGAA chr7 + 96866414 96866420 5.38e-05 0.244 CCTGGAA
CCWGGAA chr7 − 105671641 105671647 5.38e-05 0.244 CCTGGAA
CCWGGAA chr7 + 105671234 105671240 5.38e-05 0.244 CCTGGAA
CCWGGAA chr7 + 106155695 106155701 5.38e-05 0.244 CCTGGAA
CCWGGAA chr7 + 106173135 106173141 5.38e-05 0.244 CCTGGAA
CCWGGAA chr7 − 122074230 122074236 5.38e-05 0.244 CCTGGAA
CCWGGAA chr7 + 130787124 130787130 5.38e-05 0.244 CCTGGAA
CCWGGAA chr7 + 134713058 134713064 5.38e-05 0.244 CCTGGAA
CCWGGAA chr7 − 141932171 141932177 5.38e-05 0.244 CCTGGAA
CCWGGAA chr7 − 141932369 141932375 5.38e-05 0.244 CCTGGAA
CCWGGAA chr7 + 146675200 146675206 5.38e-05 0.244 CCTGGAA
CCWGGAA chr8 − 11324090 11324096 5.38e-05 0.244 CCTGGAA
CCWGGAA chr8 + 26726301 26726307 5.38e-05 0.244 CCTGGAA
CCWGGAA chr8 + 35856330 35856336 5.38e-05 0.244 CCTGGAA
CCWGGAA chr8 + 40003041 40003047 5.38e-05 0.244 CCTGGAA
CCWGGAA chr8 − 47561089 47561095 5.38e-05 0.244 CCTGGAA
CCWGGAA chr8 + 48003820 48003826 5.38e-05 0.244 CCTGGAA
CCWGGAA chr8 − 75541863 75541869 5.38e-05 0.244 CCTGGAA
CCWGGAA chr8 − 81870586 81870592 5.38e-05 0.244 CCTGGAA
CCWGGAA chr8 − 97678172 97678178 5.38e-05 0.244 CCTGGAA
CCWGGAA chr8 − 97902114 97902120 5.38e-05 0.244 CCTGGAA
CCWGGAA chr8 − 107370790 107370796 5.38e-05 0.244 CCTGGAA
CCWGGAA chr8 − 107646175 107646181 5.38e-05 0.244 CCTGGAA
CCWGGAA chr8 + 116617351 116617357 5.38e-05 0.244 CCTGGAA
CCWGGAA chr8 + 118888603 118888609 5.38e-05 0.244 CCTGGAA
CCWGGAA chr8 + 123014221 123014227 5.38e-05 0.244 CCTGGAA
CCWGGAA chr8 − 123015269 123015275 5.38e-05 0.244 CCTGGAA
CCWGGAA chr8 − 126221321 126221327 5.38e-05 0.244 CCTGGAA
CCWGGAA chr8 + 126500471 126500477 5.38e-05 0.244 CCTGGAA
CCWGGAA chr9 + 31801970 31801976 5.38e-05 0.244 CCTGGAA
CCWGGAA chr9 + 31807680 31807686 5.38e-05 0.244 CCTGGAA
CCWGGAA chr9 − 47391111 47391117 5.38e-05 0.244 CCTGGAA
CCWGGAA chr9 − 59607568 59607574 5.38e-05 0.244 CCTGGAA
CCWGGAA chr9 − 61269690 61269696 5.38e-05 0.244 CCTGGAA
CCWGGAA chr9 − 71013553 71013559 5.38e-05 0.244 CCTGGAA
CCWGGAA chr9 − 74552099 74552105 5.38e-05 0.244 CCTGGAA
CCWGGAA chr9 + 80104756 80104762 5.38e-05 0.244 CCTGGAA
CCWGGAA chr9 − 80574316 80574322 5.38e-05 0.244 CCTGGAA
CCWGGAA chr9 + 94238549 94238555 5.38e-05 0.244 CCTGGAA
CCWGGAA chr9 + 96742526 96742532 5.38e-05 0.244 CCTGGAA
CCWGGAA chr9 − 108277177 108277183 5.38e-05 0.244 CCTGGAA
CCWGGAA chr9 − 108303511 108303517 5.38e-05 0.244 CCTGGAA
CCWGGAA chr9 + 108448794 108448800 5.38e-05 0.244 CCTGGAA
CCWGGAA chr9 + 110219872 110219878 5.38e-05 0.244 CCTGGAA
CCWGGAA chr9 − 112040410 112040416 5.38e-05 0.244 CCTGGAA
CCWGGAA chr9 − 121807384 121807390 5.38e-05 0.244 CCTGGAA
CCWGGAA chr9 − 122623149 122623155 5.38e-05 0.244 CCTGGAA
CCWGGAA chrX + 6548784 6548790 5.38e-05 0.244 CCTGGAA
CCWGGAA chrX + 34344241 34344247 5.38e-05 0.244 CCTGGAA
CCWGGAA chrX + 40483216 40483222 5.38e-05 0.244 CCTGGAA
CCWGGAA chrX + 98844415 98844421 5.38e-05 0.244 CCTGGAA
CCWGGAA chrX + 98844475 98844481 5.38e-05 0.244 CCTGGAA
CCWGGAA chrX − 120325061 120325067 5.38e-05 0.244 CCTGGAA
CCWGGAA chrX − 120778708 120778714 5.38e-05 0.244 CCTGGAA
CCWGGAA chrX + 121312804 121312810 5.38e-05 0.244 CCTGGAA
CCWGGAA chrX + 160184048 160184054 5.38e-05 0.244 CCTGGAA
CCWGGAA chrX + 160184264 160184270 5.38e-05 0.244 CCTGGAA
DEBUGGING INFORMATION

Command line: 

/share/pkg/meme/4.10.0_4/install/bin/fimo --parse-genomic-coord --verbosity 1 --oc Static_Male-biased_Output/fimo_out_11 --bgfile Static_Male-biased_Output/background --motif CCWGGAA Static_Male-biased_Output/dreme_out/dreme.xml Static_Male-biased_Output/Static_Male-biased.fa

Settings: 




output directory = Static_Male-biased_Output/fimo_out_11
MEME file name = Static_Male-biased_Output/dreme_out/dreme.xml
sequence file name = Static_Male-biased_Output/Static_Male-biased.fa




background file name = Static_Male-biased_Output/background
allow clobber = true
compute q-values = true




parse genomic coord. = true
text only = false
scan both strands = true




max sequence length = 250000000
output threshold = 0.0001
threshold type = p-value




max stored scores = 100000
pseudocount = 0.1
verbosity = 1




selected motif = CCWGGAA

This information can be useful in the event you wish to report a problem with the FIMO software.

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