Database and Motifs High-scoring Motif Occurrences Debugging Information



FIMO - Motif search tool

FIMO version 4.10.0, (Release date: Wed May 21 10:35:36 2014 +1000)

For further information on how to interpret these results or to get a copy of the FIMO software please access http://meme.nbcr.net

If you use FIMO in your research, please cite the following paper:
Charles E. Grant, Timothy L. Bailey, and William Stafford Noble, "FIMO: Scanning for occurrences of a given motif", Bioinformatics, 27(7):1017-1018, 2011. [full text]


DATABASE AND MOTIFS

DATABASE Static_Male-biased_Output/Static_Male-biased.fa
Database contains 1954 sequences, 977000 residues

MOTIFS ./JASPAR_CORE_2014_vertebrates.meme (nucleotide)

MOTIF WIDTH BEST POSSIBLE MATCH
MA0004.1 6 CACGTG
MA0006.1 6 TGCGTG
MA0009.1 11 CTAGGTGTGAA
MA0017.1 14 TGACCTTTGAACCT
MA0019.1 12 AGATGCAATCCC
MA0025.1 11 TTATGTAACAT
MA0027.1 11 AAGTAGTGTTC
MA0028.1 10 GAGCCGGAAG
MA0029.1 14 AAGATAAGATAATA
MA0030.1 14 CAAACGTAAACAAT
MA0031.1 8 GTAAACAT
MA0032.1 8 GGTAAGTA
MA0033.1 8 TATACATA
MA0038.1 10 CAAATCACTG
MA0040.1 11 TATTGTTTATT
MA0041.1 12 GAATGTTTGTTT
MA0042.1 12 GGATGTTTGTTT
MA0043.1 12 GGTTACGTAATT
MA0046.1 14 GGTTAATAATTAAC
MA0048.1 12 GCGCAGCTGCGT
MA0051.1 18 GGAAAGTGAAAGCAAAAC
MA0056.1 6 TGGGGA
MA0057.1 10 GTAGGGGGAA
MA0059.1 11 GAGCACGTGGT
MA0063.1 7 TTAATTG
MA0066.1 20 GTAGGTCACGGTGACCTACT
MA0067.1 8 AGTCACGG
MA0068.1 30 GAAAAATTTCCAATACTCCACTCCCCCCCC
MA0069.1 14 TTCACGCATGAGTT
MA0070.1 12 CCATCAATCAAA
MA0071.1 10 ATCAAGGTCA
MA0072.1 14 TATAAGTAGGTCAA
MA0073.1 20 CCCCAAACCACCCCCCCCCA
MA0074.1 15 GGGTCATCGAGTTCA
MA0075.1 5 AATTA
MA0077.1 9 CCATTGTTC
MA0078.1 9 TTCATTGTC
MA0081.1 7 AGAGGAA
MA0084.1 9 GTAAACAAT
MA0087.1 7 ATTGTTT
MA0088.1 20 GATTTCCCATAATGCCTTGC
MA0089.1 6 CATGAC
MA0090.1 12 CACATTCCTCCG
MA0091.1 12 CGACCATCTGTT
MA0092.1 10 GGTCTGGCAT
MA0101.1 10 GGGGATTTCC
MA0107.1 10 GGGAATTTCC
MA0108.2 15 GTATAAAAGGCGGGG
MA0109.1 10 AACCTTATAT
MA0111.1 11 AGGGTAACAGC
MA0115.1 17 AAAGGTCAAAGGTCAAC
MA0116.1 15 GGCACCCAGGGGTGC
MA0117.1 8 GCTGACGG
MA0119.1 14 TGGCACCATGCCAA
MA0122.1 9 TTAAGTGGA
MA0124.1 7 ATACTTA
MA0125.1 8 TAATTGGT
MA0130.1 6 ATCCAC
MA0131.1 10 TAACGTCCGC
MA0132.1 6 CTAATT
MA0133.1 7 ACAACAC
MA0135.1 13 AAATTAATTAATC
MA0136.1 9 TACTTCCTT
MA0139.1 19 TGGCCACCAGGGGGCGCTA
MA0142.1 15 CTTTGTTATGCAAAT
MA0149.1 18 GGAAGGAAGGAAGGAAGG
MA0062.2 11 CCGGAAGTGGC
MA0039.2 10 TGGGTGGGGC
MA0138.2 21 TTCAGCACCATGGACAGCGCC
MA0002.2 11 GTCTGTGGTTT
MA0047.2 12 TGTTTACTTAGG
MA0112.2 20 GGCCCAGGTCACCCTGACCT
MA0065.2 15 GTAGGGCAAAGGTCA
MA0151.1 6 ATTAAA
MA0152.1 7 TTTTCCA
MA0153.1 12 TTAATATTTAAC
MA0155.1 12 TGTCAGGGGGCG
MA0156.1 8 CAGGAAAT
MA0157.1 8 TGTAAACA
MA0158.1 8 CACTAATT
MA0159.1 17 AGGTCATGGAGAGGTCA
MA0160.1 8 AAGGTCAC
MA0161.1 6 TTGGCA
MA0163.1 14 GGGGCCCAAGGGGG
MA0164.1 7 CAAGCTT
MA0018.2 8 TGACGTCA
MA0099.2 7 TGACTCA
MA0259.1 8 GGACGTGC
MA0442.1 6 CTTTGT
MA0141.2 12 AGGTCAAGGTCA
MA0145.2 14 CCAGTTCAAACCAG
MA0146.2 14 GGGGCCGAGGCCTG
MA0461.1 8 CAGATGGC
MA0462.1 11 GAAATGACTCA
MA0463.1 14 TTTCCTAGAAAGCA
MA0464.1 11 CTCACGTGCAC
MA0465.1 11 AAGCCATAAAA
MA0466.1 11 TATTGCACAAT
MA0467.1 11 AAGAGGATTAG
MA0468.1 11 TAATTTAATCA
MA0469.1 15 CTCCCGCCCCCACTC
MA0470.1 11 GGGCGGGAAGG
MA0471.1 11 GGGCGGGAAGG
MA0472.1 15 CCCCCGCCCACGCAC
MA0473.1 13 GAACCAGGAAGTG
MA0474.1 11 ACAGGAAGTGG
MA0475.1 11 ACAGGAAGTGG
MA0476.1 11 TGTGACTCATT
MA0477.1 11 GGTGACTCATG
MA0478.1 11 GGATGACTCAT
MA0479.1 11 TCCAATCCACA
MA0480.1 11 TCCTGTTTACA
MA0481.1 15 CAAAAGTAAACAAAG
MA0482.1 11 TCTTATCTCCC
MA0483.1 11 AAATCACAGCA
MA0484.1 15 AGAGTCCAAAGTCCA
MA0485.1 13 GGCCATAAATCAC
MA0486.1 15 CTTCTAGAAGGTTCT
MA0488.1 13 AAGATGATGTCAT
MA0489.1 14 AGGAGATGACTCAT
MA0490.1 11 GGATGACTCAT
MA0491.1 11 GGTGACTCATC
MA0492.1 15 AAAGATGATGTCATC
MA0493.1 11 GGCCACACCCA
MA0494.1 19 TGACCTAAAGTAACCTCTG
MA0495.1 18 GCTGAGTCAGCAATTTTT
MA0496.1 15 CTGAGTCAGCAATTT
MA0497.1 15 ATGCTAAAAATAGAA
MA0498.1 15 AGCTGTCACTCACCT
MA0499.1 13 TGCAGCTGTCCCT
MA0500.1 11 GACAGCTGCAG
MA0501.1 15 ATGACTCAGCAATTT
MA0502.1 15 AAATGGACCAATCAG
MA0503.1 11 AGCCACTCAAG
MA0504.1 15 AGGGGTCAGAGGTCA
MA0505.1 15 AAGTTCAAGGTCAGC
MA0506.1 11 GCGCCTGCGCA
MA0507.1 13 TTCATTTGCATAT
MA0508.1 15 AGAAAGTGAAAGTGA
MA0509.1 14 GTTGCCATGGCAAC
MA0510.1 15 CTCCCTGGCAACAGC
MA0511.1 15 GGGGTTTGTGGTTTG
MA0512.1 11 CAAAGGTCAGA
MA0513.1 13 CTGTCTGTCACCT
MA0514.1 10 CCTTTGTTTT
MA0515.1 10 CCATTGTTTT
MA0516.1 15 GCCCCGCCCCCTCCC
MA0517.1 15 TCAGTTTCATTTTCC
MA0518.1 14 TTTCCAGGAAATGG
MA0519.1 11 ATTTCCAAGAA
MA0520.1 15 CATTTCCTGAGAAAT
MA0521.1 11 AACAGCTGCAG
MA0522.1 11 CACAGCTGCAG
MA0523.1 14 AAAGATCAAAGGAA
MA0524.1 15 CATGGCCCCAGGGCA
MA0525.1 20 AGACATGCCCAGACATGCCC
MA0526.1 11 GTCATGTGACC
MA0527.1 15 CTCTCGCGAGATCTG
MA0528.1 21 GGAGGAGGAGGGGGAGGAGGA
MA0007.2 15 AAGAACAGAATGTTC
MA0102.3 11 ATTGCACAATA
MA0024.2 11 CGGGCGGGAGG
MA0154.2 11 GTCCCCAGGGA
MA0162.2 14 CCCCCGCCCCCGCC
MA0076.2 11 CCACTTCCGGC
MA0258.2 15 AGGTCACCCTGACCT
MA0098.2 15 CCCACTTCCTGTCTC
MA0148.3 15 TCCATGTTTACTTTG
MA0035.3 11 TTCTTATCTGT
MA0036.2 14 AGATTCTTATCTGT
MA0037.2 8 AGATAAGA
MA0114.2 15 CTGGACTTTGGACTC
MA0050.2 21 TTTTACTTTCACTTTCACTTT
MA0058.2 10 AAGCACATGG
MA0052.2 15 AGCTAAAAATAGCAT
MA0100.2 10 CCAACTGCCA
MA0147.2 10 CCATGTGCTT
MA0104.3 8 GCCACGTG
MA0150.2 15 CAGCATGACTCAGCA
MA0105.3 11 GGGAATTTCCC
MA0060.2 18 AGAGTGCTGATTGGTCCA
MA0014.2 19 GAGGGCAGCCAAGCGTGAC
MA0080.3 15 AAAAAGAGGAAGTGA
MA0143.3 8 CCTTTGTT
MA0079.3 11 GCCCCGCCCCC
MA0083.2 18 CATGCCCAAATAAGGCAA
MA0137.3 11 TTTCCAGGAAA
MA0144.2 11 CTTCTGGGAAA
MA0140.2 18 CTTATCTGTGAGGAGCAG
MA0003.2 15 CATTGCCTCAGGGCA
MA0106.2 15 ACATGCCCAGACATG
MA0093.2 11 GCCACGTGACC
MA0095.2 12 CAAGATGGCGGC
MA0103.2 9 CCTCACCTG
MA0591.1 15 AGGATGACTCAGCAC
MA0592.1 11 CCAAGGTCACA
MA0593.1 11 AAGTAAACAAA
MA0594.1 11 GCCATAAATCA
MA0595.1 10 ATCACCCCAC
MA0596.1 10 ATGGGGTGAT
MA0597.1 9 CTGCCCGCA
MA0598.1 8 CCTTCCTG
MA0599.1 10 GCCCCGCCCC
MA0600.1 19 GTTGCCATGGCAACCGCGG
MA0113.2 15 AGAACAGAATGTTCT

Random model letter frequencies (from Static_Male-biased_Output/background):
A 0.274 C 0.227 G 0.227 T 0.274


SECTION I: HIGH-SCORING MOTIF OCCURRENCES

Motif Sequence Name Strand Start End p-value q-value Matched Sequence
MA0597.1 chr1 34179934 34179942 7.81e-06 0.469 CTGCCCTCA
MA0597.1 chr11 + 97692739 97692747 7.81e-06 0.469 CTGCCCTCA
MA0597.1 chr12 + 52970704 52970712 7.81e-06 0.469 CTGCCCTCA
MA0597.1 chr15 + 82280553 82280561 7.81e-06 0.469 CTGCCCTCA
MA0597.1 chr15 + 95580665 95580673 7.81e-06 0.469 CTGCCCTCA
MA0597.1 chr16 18403622 18403630 7.81e-06 0.469 CTGCCCTCA
MA0597.1 chr16 + 46097678 46097686 7.81e-06 0.469 CTGCCCTCA
MA0597.1 chr17 + 84668241 84668249 7.81e-06 0.469 CTGCCCTCA
MA0597.1 chr18 9485567 9485575 7.81e-06 0.469 CTGCCCTCA
MA0597.1 chr18 12875354 12875362 7.81e-06 0.469 CTGCCCTCA
MA0597.1 chr18 64759336 64759344 7.81e-06 0.469 CTGCCCTCA
MA0597.1 chr2 168901074 168901082 7.81e-06 0.469 CTGCCCTCA
MA0597.1 chr3 32474192 32474200 7.81e-06 0.469 CTGCCCTCA
MA0597.1 chr3 + 121349696 121349704 7.81e-06 0.469 CTGCCCTCA
MA0597.1 chr3 + 148710276 148710284 7.81e-06 0.469 CTGCCCTCA
MA0597.1 chr4 107720380 107720388 7.81e-06 0.469 CTGCCCTCA
MA0597.1 chr4 + 154690961 154690969 7.81e-06 0.469 CTGCCCTCA
MA0597.1 chr6 58690751 58690759 7.81e-06 0.469 CTGCCCTCA
MA0597.1 chr7 141385011 141385019 7.81e-06 0.469 CTGCCCTCA
MA0597.1 chr8 + 116628481 116628489 7.81e-06 0.469 CTGCCCTCA
MA0597.1 chr9 116087275 116087283 7.81e-06 0.469 CTGCCCTCA
MA0597.1 chr9 + 122622844 122622852 7.81e-06 0.469 CTGCCCTCA
MA0597.1 chrX 137587095 137587103 7.81e-06 0.469 CTGCCCTCA
MA0597.1 chr1 75118507 75118515 1.01e-05 0.469 CTGCCCGGA
MA0597.1 chr16 + 81188094 81188102 1.01e-05 0.469 CTGCCCGGA
MA0597.1 chr17 24402326 24402334 1.01e-05 0.469 CTGCCCGGA
MA0597.1 chr18 + 13201275 13201283 1.01e-05 0.469 CTGCCCGGA
MA0597.1 chr3 + 129261580 129261588 1.01e-05 0.469 CTGCCCGGA
MA0597.1 chr6 + 47945928 47945936 1.01e-05 0.469 CTGCCCGGA
MA0597.1 chr8 + 80010937 80010945 1.01e-05 0.469 CTGCCCGGA
MA0597.1 chr1 58254851 58254859 1.56e-05 0.469 CTGCCCACA
MA0597.1 chr1 176861314 176861322 1.56e-05 0.469 CTGCCCACA
MA0597.1 chr10 + 12308029 12308037 1.56e-05 0.469 CTGCCCACA
MA0597.1 chr11 16804530 16804538 1.56e-05 0.469 CTGCCCACA
MA0597.1 chr11 + 46534646 46534654 1.56e-05 0.469 CTGCCCACA
MA0597.1 chr12 + 8542601 8542609 1.56e-05 0.469 CTGCCCACA
MA0597.1 chr15 77592447 77592455 1.56e-05 0.469 CTGCCCACA
MA0597.1 chr15 88726800 88726808 1.56e-05 0.469 CTGCCCACA
MA0597.1 chr18 + 12869946 12869954 1.56e-05 0.469 CTGCCCACA
MA0597.1 chr2 + 72044105 72044113 1.56e-05 0.469 CTGCCCACA
MA0597.1 chr2 + 154848320 154848328 1.56e-05 0.469 CTGCCCACA
MA0597.1 chr3 101628423 101628431 1.56e-05 0.469 CTGCCCACA
MA0597.1 chr3 + 121349680 121349688 1.56e-05 0.469 CTGCCCACA
MA0597.1 chr4 + 152376552 152376560 1.56e-05 0.469 CTGCCCACA
MA0597.1 chr6 72435050 72435058 1.56e-05 0.469 CTGCCCACA
MA0597.1 chr6 117010187 117010195 1.56e-05 0.469 CTGCCCACA
MA0597.1 chr6 + 121586381 121586389 1.56e-05 0.469 CTGCCCACA
MA0597.1 chr6 + 143433890 143433898 1.56e-05 0.469 CTGCCCACA
MA0597.1 chr7 122354215 122354223 1.56e-05 0.469 CTGCCCACA
MA0597.1 chr7 137999438 137999446 1.56e-05 0.469 CTGCCCACA
MA0597.1 chr8 46321953 46321961 1.56e-05 0.469 CTGCCCACA
MA0597.1 chr4 + 104040249 104040257 1.75e-05 0.469 CCGCCCGCA
MA0597.1 chr10 + 26834118 26834126 2.09e-05 0.469 CTGCCCTTA
MA0597.1 chr10 + 39772282 39772290 2.09e-05 0.469 CTGCCCTTA
MA0597.1 chr10 92539339 92539347 2.09e-05 0.469 CTGCCCTTA
MA0597.1 chr10 + 120947234 120947242 2.09e-05 0.469 CTGCCCTTA
MA0597.1 chr12 51625184 51625192 2.09e-05 0.469 CTGCCCTTA
MA0597.1 chr14 + 31892576 31892584 2.09e-05 0.469 CTGCCCTTA
MA0597.1 chr19 21701232 21701240 2.09e-05 0.469 CTGCCCTTA
MA0597.1 chr19 23137330 23137338 2.09e-05 0.469 CTGCCCTTA
MA0597.1 chr19 44118674 44118682 2.09e-05 0.469 CTGCCCTTA
MA0597.1 chr4 + 62912575 62912583 2.09e-05 0.469 CTGCCCTTA
MA0597.1 chr6 + 135026021 135026029 2.09e-05 0.469 CTGCCCTTA
MA0597.1 chr6 + 149084223 149084231 2.09e-05 0.469 CTGCCCTTA
MA0597.1 chr8 + 46408458 46408466 2.09e-05 0.469 CTGCCCTTA
MA0597.1 chr8 + 46412584 46412592 2.09e-05 0.469 CTGCCCTTA
MA0597.1 chrX + 53206752 53206760 2.09e-05 0.469 CTGCCCTTA
MA0597.1 chrX 137585441 137585449 2.09e-05 0.469 CTGCCCTTA
MA0597.1 chr1 58205192 58205200 2.7e-05 0.469 CTGCCCTGA
MA0597.1 chr11 + 16777966 16777974 2.7e-05 0.469 CTGCCCTGA
MA0597.1 chr12 + 104903604 104903612 2.7e-05 0.469 CTGCCCTGA
MA0597.1 chr12 + 109284648 109284656 2.7e-05 0.469 CTGCCCTGA
MA0597.1 chr12 + 109284684 109284692 2.7e-05 0.469 CTGCCCTGA
MA0597.1 chr12 + 109284830 109284838 2.7e-05 0.469 CTGCCCTGA
MA0597.1 chr12 + 109284960 109284968 2.7e-05 0.469 CTGCCCTGA
MA0597.1 chr13 95169148 95169156 2.7e-05 0.469 CTGCCCTGA
MA0597.1 chr14 + 11992185 11992193 2.7e-05 0.469 CTGCCCTGA
MA0597.1 chr14 31892676 31892684 2.7e-05 0.469 CTGCCCTGA
MA0597.1 chr14 118079288 118079296 2.7e-05 0.469 CTGCCCTGA
MA0597.1 chr15 + 82288368 82288376 2.7e-05 0.469 CTGCCCTGA
MA0597.1 chr16 + 30257798 30257806 2.7e-05 0.469 CTGCCCTGA
MA0597.1 chr17 11229551 11229559 2.7e-05 0.469 CTGCCCTGA
MA0597.1 chr18 + 43023721 43023729 2.7e-05 0.469 CTGCCCTGA
MA0597.1 chr2 163710899 163710907 2.7e-05 0.469 CTGCCCTGA
MA0597.1 chr4 + 125069843 125069851 2.7e-05 0.469 CTGCCCTGA
MA0597.1 chr4 149801100 149801108 2.7e-05 0.469 CTGCCCTGA
MA0597.1 chr5 + 4089890 4089898 2.7e-05 0.469 CTGCCCTGA
MA0597.1 chr5 64146517 64146525 2.7e-05 0.469 CTGCCCTGA
MA0597.1 chr5 123148638 123148646 2.7e-05 0.469 CTGCCCTGA
MA0597.1 chr5 + 123472991 123472999 2.7e-05 0.469 CTGCCCTGA
MA0597.1 chr6 + 87953917 87953925 2.7e-05 0.469 CTGCCCTGA
MA0597.1 chr6 98541162 98541170 2.7e-05 0.469 CTGCCCTGA
MA0597.1 chr7 147914226 147914234 2.7e-05 0.469 CTGCCCTGA
MA0597.1 chr8 122933554 122933562 2.7e-05 0.469 CTGCCCTGA
MA0597.1 chr9 + 74694865 74694873 2.7e-05 0.469 CTGCCCTGA
MA0597.1 chr9 + 80104992 80105000 2.7e-05 0.469 CTGCCCTGA
MA0597.1 chr1 36158460 36158468 3.16e-05 0.469 CTGCCAGCA
MA0597.1 chr1 65662342 65662350 3.16e-05 0.469 CTGCCAGCA
MA0597.1 chr11 16769597 16769605 3.16e-05 0.469 CTGCCAGCA
MA0597.1 chr11 + 81302399 81302407 3.16e-05 0.469 CTGCCAGCA
MA0597.1 chr11 + 117512709 117512717 3.16e-05 0.469 CTGCCAGCA
MA0597.1 chr13 + 57468324 57468332 3.16e-05 0.469 CTGCCAGCA
MA0597.1 chr13 + 92095002 92095010 3.16e-05 0.469 CTGCCAGCA
MA0597.1 chr13 + 102547965 102547973 3.16e-05 0.469 CTGCCAGCA
MA0597.1 chr13 104369721 104369729 3.16e-05 0.469 CTGCCAGCA
MA0597.1 chr15 + 102013779 102013787 3.16e-05 0.469 CTGCCAGCA
MA0597.1 chr16 + 23967377 23967385 3.16e-05 0.469 CTGCCAGCA
MA0597.1 chr16 24225739 24225747 3.16e-05 0.469 CTGCCAGCA
MA0597.1 chr16 24238540 24238548 3.16e-05 0.469 CTGCCAGCA
MA0597.1 chr16 35743280 35743288 3.16e-05 0.469 CTGCCAGCA
MA0597.1 chr18 12900047 12900055 3.16e-05 0.469 CTGCCCGCC
MA0597.1 chr18 13547220 13547228 3.16e-05 0.469 CTGCCAGCA
MA0597.1 chr18 38359903 38359911 3.16e-05 0.469 CTGCCAGCA
MA0597.1 chr3 10239749 10239757 3.16e-05 0.469 CTGCCAGCA
MA0597.1 chr3 + 27798355 27798363 3.16e-05 0.469 CTGCCAGCA
MA0597.1 chr3 + 54562130 54562138 3.16e-05 0.469 CTGCCAGCA
MA0597.1 chr3 94514807 94514815 3.16e-05 0.469 CTGCCAGCA
MA0597.1 chr3 129296114 129296122 3.16e-05 0.469 CTGCCAGCA
MA0597.1 chr4 102905066 102905074 3.16e-05 0.469 CTGCCAGCA
MA0597.1 chr4 + 107723466 107723474 3.16e-05 0.469 CTGCCAGCA
MA0597.1 chr5 + 136363709 136363717 3.16e-05 0.469 CTGCCCGCC
MA0597.1 chr6 + 145814751 145814759 3.16e-05 0.469 CTGCCCGCC
MA0597.1 chr6 + 146275545 146275553 3.16e-05 0.469 CTGCCCGCC
MA0597.1 chr7 + 77660402 77660410 3.16e-05 0.469 CTGCCAGCA
MA0597.1 chr7 137999427 137999435 3.16e-05 0.469 CTGCCCGCC
MA0597.1 chr9 24671328 24671336 3.16e-05 0.469 CTGCCAGCA
MA0597.1 chr9 115061305 115061313 3.16e-05 0.469 CTGCCAGCA
MA0597.1 chr9 + 116046411 116046419 3.16e-05 0.469 CTGCCAGCA
MA0597.1 chrX 35841577 35841585 3.16e-05 0.469 CTGCCAGCA
MA0597.1 chr10 + 95239796 95239804 3.44e-05 0.498 CTGCCCGAA
MA0597.1 chr13 74156595 74156603 3.44e-05 0.498 CTGCCCGAA
MA0597.1 chr8 + 126166039 126166047 3.44e-05 0.498 CTGCCCGAA
MA0597.1 chr1 + 60881831 60881839 3.77e-05 0.508 TTGCCCTCA
MA0597.1 chr11 60675710 60675718 3.77e-05 0.508 TTGCCCTCA
MA0597.1 chr11 62419527 62419535 3.77e-05 0.508 TTGCCCTCA
MA0597.1 chr11 + 111104119 111104127 3.77e-05 0.508 TTGCCCTCA
MA0597.1 chr12 + 77110901 77110909 3.77e-05 0.508 TTGCCCTCA
MA0597.1 chr17 + 28844870 28844878 3.77e-05 0.508 TTGCCCTCA
MA0597.1 chr18 + 85885674 85885682 3.77e-05 0.508 TTGCCCTCA
MA0597.1 chr7 53998400 53998408 3.77e-05 0.508 TTGCCCTCA
MA0597.1 chr1 + 75009388 75009396 4.1e-05 0.508 CTGCCCATA
MA0597.1 chr10 27812057 27812065 4.1e-05 0.508 CTGCCCATA
MA0597.1 chr10 114796046 114796054 4.1e-05 0.508 CTGCCCATA
MA0597.1 chr15 + 82274455 82274463 4.1e-05 0.508 CTGCCCATA
MA0597.1 chr16 + 98014537 98014545 4.1e-05 0.508 CTGCCCATA
MA0597.1 chr2 + 27570906 27570914 4.1e-05 0.508 CTGCCCATA
MA0597.1 chr2 61370864 61370872 4.1e-05 0.508 CTGCCCATA
MA0597.1 chr2 168901086 168901094 4.1e-05 0.508 CTGCCCATA
MA0597.1 chr5 + 96733138 96733146 4.1e-05 0.508 CTGCCCATA
MA0597.1 chr6 122079812 122079820 4.1e-05 0.508 CTGCCCATA
MA0597.1 chr7 137999372 137999380 4.1e-05 0.508 CTGCCCATA
MA0597.1 chr16 23967227 23967235 4.38e-05 0.508 TTGCCCGGA
MA0597.1 chr1 38918479 38918487 5.11e-05 0.508 CTGCCCAGA
MA0597.1 chr1 180714762 180714770 5.11e-05 0.508 CTGCCCAGA
MA0597.1 chr10 17019758 17019766 5.11e-05 0.508 CTGCCCAGA
MA0597.1 chr11 81824473 81824481 5.11e-05 0.508 CTGCCCAGA
MA0597.1 chr11 119086269 119086277 5.11e-05 0.508 CTGCCCAGA
MA0597.1 chr12 104903441 104903449 5.11e-05 0.508 CTGCCCAGA
MA0597.1 chr13 + 24407507 24407515 5.11e-05 0.508 CTGCCCAGA
MA0597.1 chr13 51190355 51190363 5.11e-05 0.508 CTGCCCAGA
MA0597.1 chr13 + 54766053 54766061 5.11e-05 0.508 CTGCCCAGA
MA0597.1 chr14 + 59612074 59612082 5.11e-05 0.508 CTGCCCAGA
MA0597.1 chr14 118154821 118154829 5.11e-05 0.508 CTGCCCAGA
MA0597.1 chr14 + 120230431 120230439 5.11e-05 0.508 CTGCCCAGA
MA0597.1 chr16 24231790 24231798 5.11e-05 0.508 CTGCCCAGA
MA0597.1 chr16 25911701 25911709 5.11e-05 0.508 CTGCCCAGA
MA0597.1 chr17 + 46585207 46585215 5.11e-05 0.508 CTGCCCAGA
MA0597.1 chr17 + 66015729 66015737 5.11e-05 0.508 CTGCCCAGA
MA0597.1 chr18 + 13202228 13202236 5.11e-05 0.508 CTGCCCAGA
MA0597.1 chr18 + 39875370 39875378 5.11e-05 0.508 CTGCCCAGA
MA0597.1 chr19 + 59445971 59445979 5.11e-05 0.508 CTGCCCAGA
MA0597.1 chr2 161147696 161147704 5.11e-05 0.508 CTGCCCAGA
MA0597.1 chr3 27393221 27393229 5.11e-05 0.508 CTGCCCAGA
MA0597.1 chr3 94514766 94514774 5.11e-05 0.508 CTGCCCAGA
MA0597.1 chr4 107772701 107772709 5.11e-05 0.508 CTGCCCAGA
MA0597.1 chr5 66932845 66932853 5.11e-05 0.508 CTGCCCAGA
MA0597.1 chr5 96438221 96438229 5.11e-05 0.508 CTGCCCAGA
MA0597.1 chr5 100020508 100020516 5.11e-05 0.508 CTGCCCAGA
MA0597.1 chr5 + 134903904 134903912 5.11e-05 0.508 CTGCCCAGA
MA0597.1 chr6 + 50681196 50681204 5.11e-05 0.508 CTGCCCAGA
MA0597.1 chr6 50753392 50753400 5.11e-05 0.508 CTGCCCAGA
MA0597.1 chr7 + 36532118 36532126 5.11e-05 0.508 CTGCCCAGA
MA0597.1 chr8 + 107579855 107579863 5.11e-05 0.508 CTGCCCAGA
MA0597.1 chr8 + 107614990 107614998 5.11e-05 0.508 CTGCCCAGA
MA0597.1 chr8 + 126500056 126500064 5.11e-05 0.508 CTGCCCAGA
MA0597.1 chr9 + 100520535 100520543 5.11e-05 0.508 CTGCCCAGA
MA0597.1 chr11 16733125 16733133 5.34e-05 0.508 CCGCCCTCA
MA0597.1 chr16 46097561 46097569 5.34e-05 0.508 CCGCCCTCA
MA0597.1 chr17 31741839 31741847 5.34e-05 0.508 CCGCCCTCA
MA0597.1 chr19 46206302 46206310 5.34e-05 0.508 CCGCCCTCA
MA0597.1 chr8 123155726 123155734 5.34e-05 0.508 CCGCCCTCA
MA0597.1 chr1 155617841 155617849 5.57e-05 0.508 CTGCCCGCT
MA0597.1 chr18 12877254 12877262 5.57e-05 0.508 CTGCCCGCT
MA0597.1 chr3 + 18143278 18143286 5.57e-05 0.508 CTGCCCGCT
MA0597.1 chr12 111133764 111133772 5.91e-05 0.508 TTGCCCACA
MA0597.1 chr13 44087126 44087134 5.91e-05 0.508 TTGCCCACA
MA0597.1 chr13 69783673 69783681 5.91e-05 0.508 TTGCCCACA
MA0597.1 chr16 11407769 11407777 5.91e-05 0.508 TTGCCCACA
MA0597.1 chr17 + 28949439 28949447 5.91e-05 0.508 TTGCCCACA
MA0597.1 chr4 + 115274432 115274440 5.91e-05 0.508 TTGCCCACA
MA0597.1 chr5 138449175 138449183 5.91e-05 0.508 TTGCCCACA
MA0597.1 chr6 + 146275408 146275416 5.91e-05 0.508 TTGCCCACA
MA0597.1 chr6 + 145814594 145814602 6.37e-05 0.508 CTTCCCGCA
MA0597.1 chr10 31364393 31364401 7.16e-05 0.508 CTGCCAGTA
MA0597.1 chr12 3702945 3702953 7.16e-05 0.508 CTGCCAGTA
MA0597.1 chr19 + 4800513 4800521 7.16e-05 0.508 CTGCCAGTA
MA0597.1 chr2 + 163136062 163136070 7.16e-05 0.508 CTGCCAGTA
MA0597.1 chr6 50754718 50754726 7.16e-05 0.508 CTGCCAGTA
MA0597.1 chr6 98541332 98541340 7.16e-05 0.508 CTGCCAGTA
MA0597.1 chr7 134713545 134713553 7.16e-05 0.508 CTGCCAGTA
MA0597.1 chr8 129986679 129986687 7.16e-05 0.508 CTGCCAGTA
MA0597.1 chrX 137588526 137588534 7.16e-05 0.508 CTGCCCGTC
MA0597.1 chr14 + 66340625 66340633 7.39e-05 0.508 CCGCCCACA
MA0597.1 chr14 + 121493193 121493201 7.39e-05 0.508 CCGCCCACA
MA0597.1 chr14 + 121493216 121493224 7.39e-05 0.508 CCGCCCACA
MA0597.1 chr14 + 121493239 121493247 7.39e-05 0.508 CCGCCCACA
MA0597.1 chr9 + 96770895 96770903 7.39e-05 0.508 CCGCCCACA
MA0597.1 chr1 102393411 102393419 7.79e-05 0.508 TTGCCCTTA
MA0597.1 chr1 + 109888772 109888780 7.79e-05 0.508 TTGCCCTTA
MA0597.1 chr1 155618163 155618171 7.79e-05 0.508 TTGCCCTTA
MA0597.1 chr10 87183011 87183019 7.79e-05 0.508 TTGCCCTTA
MA0597.1 chr13 102738146 102738154 7.79e-05 0.508 TTGCCCTTA
MA0597.1 chr16 + 48768011 48768019 7.79e-05 0.508 TTGCCCTTA
MA0597.1 chr18 12234961 12234969 7.79e-05 0.508 TTGCCCTTA
MA0597.1 chr18 55246882 55246890 7.79e-05 0.508 TTGCCCTTA
MA0597.1 chr2 + 39092561 39092569 7.79e-05 0.508 TTGCCCTTA
MA0597.1 chr8 118888892 118888900 7.79e-05 0.508 TTGCCCTTA
MA0597.1 chrX 139337250 139337258 7.79e-05 0.508 TTGCCCTTA
MA0597.1 chr1 + 58251389 58251397 8.58e-05 0.508 CTGCCCCCA
MA0597.1 chr1 93316984 93316992 8.58e-05 0.508 CTGCCCTCC
MA0597.1 chr10 + 18090435 18090443 8.58e-05 0.508 CTGCCCCCA
MA0597.1 chr10 + 81018964 81018972 8.58e-05 0.508 CTGCCATCA
MA0597.1 chr10 + 92539388 92539396 8.58e-05 0.508 CTGCCCTCC
MA0597.1 chr10 + 111035324 111035332 8.58e-05 0.508 CTGCCCCCA
MA0597.1 chr10 120935580 120935588 8.58e-05 0.508 CTGCCCTCC
MA0597.1 chr11 + 16680520 16680528 8.58e-05 0.508 CTGCCCCCA
MA0597.1 chr11 16740305 16740313 8.58e-05 0.508 CTGCCATCA
MA0597.1 chr11 16765470 16765478 8.58e-05 0.508 CTGCCCTCC
MA0597.1 chr11 + 16771666 16771674 8.58e-05 0.508 CTGCCATCA
MA0597.1 chr11 + 106529368 106529376 8.58e-05 0.508 CTGCCCTCC
MA0597.1 chr11 112672046 112672054 8.58e-05 0.508 CTGCCCCCA
MA0597.1 chr12 8223556 8223564 8.58e-05 0.508 CTGCCCTCC
MA0597.1 chr12 + 36102673 36102681 8.58e-05 0.508 CTGCCATCA
MA0597.1 chr12 105317640 105317648 8.58e-05 0.508 CTGCCCTCC
MA0597.1 chr13 + 57468531 57468539 8.58e-05 0.508 CTGCCCTCC
MA0597.1 chr13 + 81476830 81476838 8.58e-05 0.508 CTGCCCTCC
MA0597.1 chr13 92094766 92094774 8.58e-05 0.508 CTGCCCTCC
MA0597.1 chr14 21789745 21789753 8.58e-05 0.508 CTGCCATCA
MA0597.1 chr14 36498799 36498807 8.58e-05 0.508 CTGCCCCCA
MA0597.1 chr14 66378245 66378253 8.58e-05 0.508 CTGCCCCCA
MA0597.1 chr14 75454939 75454947 8.58e-05 0.508 CTGCCCTCC
MA0597.1 chr15 4628911 4628919 8.58e-05 0.508 CTGCCCTCC
MA0597.1 chr15 68118879 68118887 8.58e-05 0.508 CTGCCCTCC
MA0597.1 chr16 + 23967443 23967451 8.58e-05 0.508 CTGCCCTCC
MA0597.1 chr16 + 24240664 24240672 8.58e-05 0.508 CTGCCCTCC
MA0597.1 chr16 76455549 76455557 8.58e-05 0.508 CTGCCCTCC
MA0597.1 chr16 98014701 98014709 8.58e-05 0.508 CTGCCATCA
MA0597.1 chr17 + 31456470 31456478 8.58e-05 0.508 CTGCCCTCC
MA0597.1 chr17 31741793 31741801 8.58e-05 0.508 CTGCCATCA
MA0597.1 chr18 12817978 12817986 8.58e-05 0.508 CTGCCCCCA
MA0597.1 chr18 12851718 12851726 8.58e-05 0.508 CTGCCCCCA
MA0597.1 chr18 + 12853430 12853438 8.58e-05 0.508 CTGCCCTCC
MA0597.1 chr18 + 12853456 12853464 8.58e-05 0.508 CTGCCCTCC
MA0597.1 chr18 + 12888665 12888673 8.58e-05 0.508 CTGCCCCCA
MA0597.1 chr18 13548423 13548431 8.58e-05 0.508 CTGCCCCCA
MA0597.1 chr18 + 56556544 56556552 8.58e-05 0.508 CTGCCCCCA
MA0597.1 chr18 + 64765797 64765805 8.58e-05 0.508 CTGCCCTCC
MA0597.1 chr18 + 68222200 68222208 8.58e-05 0.508 CTGCCCCCA
MA0597.1 chr18 80434325 80434333 8.58e-05 0.508 CTGCCCCCA
MA0597.1 chr19 + 26732935 26732943 8.58e-05 0.508 CTGCCCTCC
MA0597.1 chr2 34382789 34382797 8.58e-05 0.508 CTGCCCTCC
MA0597.1 chr2 131693824 131693832 8.58e-05 0.508 CTGCCCTCC
MA0597.1 chr3 27393419 27393427 8.58e-05 0.508 CTGCCATCA
MA0597.1 chr3 67327808 67327816 8.58e-05 0.508 CTGCCATCA
MA0597.1 chr4 107805001 107805009 8.58e-05 0.508 CTGCCCCCA
MA0597.1 chr4 + 128787570 128787578 8.58e-05 0.508 CTGCCCTCC
MA0597.1 chr5 90914748 90914756 8.58e-05 0.508 CTGCCATCA
MA0597.1 chr5 91629568 91629576 8.58e-05 0.508 CTGCCCTCC
MA0597.1 chr5 + 111853302 111853310 8.58e-05 0.508 CTGCCCTCC
MA0597.1 chr5 136363683 136363691 8.58e-05 0.508 CTGCCCCCA
MA0597.1 chr6 + 138029853 138029861 8.58e-05 0.508 CTGCCCTCC
MA0597.1 chr6 149164127 149164135 8.58e-05 0.508 CTGCCATCA
MA0597.1 chr7 119330920 119330928 8.58e-05 0.508 CTGCCATCA
MA0597.1 chr7 + 137999271 137999279 8.58e-05 0.508 CTGCCCCCA
MA0597.1 chr7 150969972 150969980 8.58e-05 0.508 CTGCCCTCC
MA0597.1 chr8 + 71404514 71404522 8.58e-05 0.508 CTGCCCTCC
MA0597.1 chr8 95716171 95716179 8.58e-05 0.508 CTGCCCCCA
MA0597.1 chr8 107583705 107583713 8.58e-05 0.508 CTGCCCCCA
MA0597.1 chr9 24671462 24671470 8.58e-05 0.508 CTGCCCTCC
MA0597.1 chr9 61114979 61114987 8.58e-05 0.508 CTGCCCTCC
MA0597.1 chr9 + 116096790 116096798 8.58e-05 0.508 CTGCCCCCA
MA0597.1 chrX + 96349825 96349833 8.58e-05 0.508 CTGCCCTCC
MA0597.1 chr11 16639381 16639389 8.92e-05 0.508 CTGCCCTAA
MA0597.1 chr18 12883172 12883180 8.92e-05 0.508 CTGCCCTAA
MA0597.1 chr18 12883327 12883335 8.92e-05 0.508 CTGCCCTAA
MA0597.1 chr18 + 81460721 81460729 8.92e-05 0.508 CTGCCCTAA
MA0597.1 chr8 + 116674606 116674614 8.92e-05 0.508 CTGCCCTAA
MA0597.1 chrX 74910557 74910565 8.92e-05 0.508 CTGCCCTAA
MA0597.1 chr1 + 34180036 34180044 9.38e-05 0.508 CTGCCAGGA
MA0597.1 chr1 + 74998021 74998029 9.38e-05 0.508 CTGCCCGGC
MA0597.1 chr10 + 87977813 87977821 9.38e-05 0.508 CTGCCCGGC
MA0597.1 chr10 + 122573285 122573293 9.38e-05 0.508 CTGCCAGGA
MA0597.1 chr11 16709383 16709391 9.38e-05 0.508 CTGCCAGGA
MA0597.1 chr14 + 66337202 66337210 9.38e-05 0.508 CTGCCAGGA
MA0597.1 chr14 + 66340703 66340711 9.38e-05 0.508 CTGCCAGGA
MA0597.1 chr14 66378412 66378420 9.38e-05 0.508 CTGCCAGGA
MA0597.1 chr15 + 56110262 56110270 9.38e-05 0.508 CTGCCAGGA
MA0597.1 chr15 82285660 82285668 9.38e-05 0.508 CTGCCAGGA
MA0597.1 chr16 + 13611003 13611011 9.38e-05 0.508 CTGCCAGGA
MA0597.1 chr17 29592542 29592550 9.38e-05 0.508 CTGCCAGGA
MA0597.1 chr18 12848182 12848190 9.38e-05 0.508 CTGCCAGGA
MA0597.1 chr18 12887282 12887290 9.38e-05 0.508 CTGCCCGGC
MA0597.1 chr18 + 13201319 13201327 9.38e-05 0.508 CTGCCAGGA
MA0597.1 chr18 + 13201472 13201480 9.38e-05 0.508 CTGCCAGGA
MA0597.1 chr18 + 13201523 13201531 9.38e-05 0.508 CTGCCAGGA
MA0597.1 chr18 + 13201574 13201582 9.38e-05 0.508 CTGCCAGGA
MA0597.1 chr18 + 13201625 13201633 9.38e-05 0.508 CTGCCAGGA
MA0597.1 chr18 + 13201778 13201786 9.38e-05 0.508 CTGCCAGGA
MA0597.1 chr18 + 13201829 13201837 9.38e-05 0.508 CTGCCAGGA
MA0597.1 chr18 + 13201880 13201888 9.38e-05 0.508 CTGCCAGGA
MA0597.1 chr18 + 13201931 13201939 9.38e-05 0.508 CTGCCAGGA
MA0597.1 chr18 + 13201982 13201990 9.38e-05 0.508 CTGCCAGGA
MA0597.1 chr18 + 13202033 13202041 9.38e-05 0.508 CTGCCAGGA
MA0597.1 chr18 + 13202084 13202092 9.38e-05 0.508 CTGCCAGGA
MA0597.1 chr18 + 13202135 13202143 9.38e-05 0.508 CTGCCAGGA
MA0597.1 chr18 76051544 76051552 9.38e-05 0.508 CTGCCCGGC
MA0597.1 chr19 + 4046010 4046018 9.38e-05 0.508 CTGCCAGGA
MA0597.1 chr19 23135958 23135966 9.38e-05 0.508 CTGCCAGGA
MA0597.1 chr19 23136548 23136556 9.38e-05 0.508 CTGCCAGGA
MA0597.1 chr2 22519494 22519502 9.38e-05 0.508 CTGCCAGGA
MA0597.1 chr2 + 22526361 22526369 9.38e-05 0.508 CTGCCAGGA
MA0597.1 chr2 134802722 134802730 9.38e-05 0.508 CTGCCCGGC
MA0597.1 chr2 165229969 165229977 9.38e-05 0.508 CTGCCAGGA
MA0597.1 chr2 165230121 165230129 9.38e-05 0.508 CTGCCAGGA
MA0597.1 chr3 18382420 18382428 9.38e-05 0.508 CTGCCCGGC
MA0597.1 chr3 + 90277122 90277130 9.38e-05 0.508 CTGCCCGGC
MA0597.1 chr3 + 108101420 108101428 9.38e-05 0.508 CTGCCAGGA
MA0597.1 chr4 107773080 107773088 9.38e-05 0.508 CTGCCAGGA
MA0597.1 chr4 + 154746069 154746077 9.38e-05 0.508 CTGCCAGGA
MA0597.1 chr5 + 53598075 53598083 9.38e-05 0.508 CTGCCAGGA
MA0597.1 chr5 + 92981938 92981946 9.38e-05 0.508 CTGCCAGGA
MA0597.1 chr5 + 118744410 118744418 9.38e-05 0.508 CTGCCAGGA
MA0597.1 chr6 + 34421657 34421665 9.38e-05 0.508 CTGCCAGGA
MA0597.1 chr6 50681288 50681296 9.38e-05 0.508 CTGCCAGGA
MA0597.1 chr6 115369291 115369299 9.38e-05 0.508 CTGCCCGGC
MA0597.1 chr6 + 143433578 143433586 9.38e-05 0.508 CTGCCCGGC
MA0597.1 chr8 27618404 27618412 9.38e-05 0.508 CTGCCAGGA
MA0597.1 chr8 + 76427673 76427681 9.38e-05 0.508 CTGCCAGGA
MA0597.1 chr9 66449130 66449138 9.38e-05 0.508 CTGCCAGGA
MA0597.1 chrX + 34334809 34334817 9.38e-05 0.508 CTGCCAGGA
MA0597.1 chr1 171994314 171994322 9.72e-05 0.508 TTGCCCTGA
MA0597.1 chr10 + 23966707 23966715 9.72e-05 0.508 TTGCCCTGA
MA0597.1 chr15 + 24999668 24999676 9.72e-05 0.508 TTGCCCTGA
MA0597.1 chr16 + 76455138 76455146 9.72e-05 0.508 TTGCCCTGA
MA0597.1 chr16 77044690 77044698 9.72e-05 0.508 TTGCCCTGA
MA0597.1 chr17 + 46605210 46605218 9.72e-05 0.508 TTGCCCTGA
MA0597.1 chr18 + 54294708 54294716 9.72e-05 0.508 TTGCCCTGA
MA0597.1 chr3 + 122669185 122669193 9.72e-05 0.508 TTGCCCTGA
MA0597.1 chr4 60078808 60078816 9.72e-05 0.508 TTGCCCTGA
MA0597.1 chr4 + 114937612 114937620 9.72e-05 0.508 TTGCCCTGA
MA0597.1 chr4 + 117621437 117621445 9.72e-05 0.508 TTGCCCTGA
MA0597.1 chr5 + 151636258 151636266 9.72e-05 0.508 TTGCCCTGA
MA0597.1 chr7 135159969 135159977 9.72e-05 0.508 TTGCCCTGA
MA0597.1 chr9 + 74364998 74365006 9.72e-05 0.508 TTGCCCTGA
MA0597.1 chr9 + 74882785 74882793 9.72e-05 0.508 TTGCCCTGA
MA0597.1 chrX + 121269765 121269773 9.72e-05 0.508 TTGCCCTGA
MA0597.1 chr14 120228740 120228748 9.99e-05 0.521 GTGCCCGTA

DEBUGGING INFORMATION

Command line:

/share/pkg/meme/4.10.0_4/install/bin/fimo --parse-genomic-coord --verbosity 1 --oc Static_Male-biased_Output/fimo_out_13 --bgfile Static_Male-biased_Output/background --motif MA0597.1 ./JASPAR_CORE_2014_vertebrates.meme Static_Male-biased_Output/Static_Male-biased.fa

Settings:

output directory = Static_Male-biased_Output/fimo_out_13 MEME file name = ./JASPAR_CORE_2014_vertebrates.meme sequence file name = Static_Male-biased_Output/Static_Male-biased.fa
background file name = Static_Male-biased_Output/background allow clobber = true compute q-values = true
parse genomic coord. = true text only = false scan both strands = true
max sequence length = 250000000 output threshold = 0.0001 threshold type = p-value
max stored scores = 100000 pseudocount = 0.1 verbosity = 1
selected motif = MA0597.1

This information can be useful in the event you wish to report a problem with the FIMO software.


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