FastQCFastQC Report
Mon 6 Mar 2017
G151-M14-Index-27_ATTCCT-_BCALRAANXX_L003_001.R1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameG151-M14-Index-27_ATTCCT-_BCALRAANXX_L003_001.R1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences24489933
Sequences flagged as poor quality0
Sequence length50
%GC44

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TCTCGTA10800.017.2907343
CTCGTAT12050.016.95712344
GATCGGA15800.013.9473721
CGTCTGA16650.013.88579316
TATCTCG14250.013.25826541
ATCGGAA16650.013.0935252
ACACGTC18800.012.4154213
ACGTCTG18800.012.18001915
ATCTCGT17000.011.37190742
TCGGAAG22150.010.3389953
CGGAAGA26900.08.5956884
CACGTCT33150.07.23986714
CACACGT34450.07.0948712
GCACACG37950.06.78819911
Produced by FastQC (version 0.11.2)