FastQCFastQC Report
Mon 8 Mar 2021
TC8_C5_fCTRL_2.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameTC8_C5_fCTRL_2.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences36943042
Sequences flagged as poor quality0
Sequence length150
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CCTCACCCGGCCCGGACACGGACAGGATTGACAGATTGATAGCTCTTTCT833790.2256960864240687No Hit
CGGAGAGCTCCGGGGAGGTCACCCACACCCTTCAGGATGAAAGCTGTGGT584470.15820841174909203No Hit
CCTGCCAGTAGCATATGCTTGTCTCAAAGATTAAGCCATGCATGTCTAAG549150.14864774806579276No Hit
CTTAGATCCAGGGTGCCCCTCCAACCAGGATGAGGCTCTTCATCGCTCTT429890.11636562035145888No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)