FastQCFastQC Report
Fri 18 Dec 2020
BPA10UG_M_24_2.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameBPA10UG_M_24_2.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences21502908
Sequences flagged as poor quality0
Sequence length35-75
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CACGATCACAAGAAAGACGTGGTCCTGACAGACAGACAATCCTATTCCCTACCAAAATGAAGATGCTGCTGCTG346020.16091776981978437No Hit
CCCCACTAGCCTCTGGCAAAATGAAGTGGGTAACCTTTCTCCTCCTCCTCTTCGTCTCCGGCTCTGCTTTTTCCA275630.1281826625496421No Hit
CTAGCCTCTGGCAAAATGAAGTGGGTAACCTTTCTCCTCCTCCTCTTCGTCTCCGGCTCTGCTTTTTCCAGGGGT237330.11037111817620202No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.7)