FastQCFastQC Report
Thu 14 Jan 2021
TC2_F2_fBPAhi_2.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameTC2_F2_fBPAhi_2.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences61154547
Sequences flagged as poor quality0
Sequence length35-75
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA811820.1327489188988678No Hit
CTAGCCTCTGGCAAAATGAAGTGGGTAACCTTTCTCCTCCTCCTCTTCGTCTCCGGCTCTGCTTTTTCCAGGGGT728150.11906718890420363No Hit
CCCCACTAGCCTCTGGCAAAATGAAGTGGGTAACCTTTCTCCTCCTCCTCTTCGTCTCCGGCTCTGCTTTTTCCA645370.10553099183287222No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)