FastQCFastQC Report
Tue 4 May 2021
TC4_E2_fDEHP_2.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameTC4_E2_fDEHP_2.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences40363850
Sequences flagged as poor quality0
Sequence length52
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CTTGTCACTAGATGCAAAGACGCCTTAGCCTAAACACATCACAACCACAACC797700.19762733237785793No Hit
GGATGACTTTGCACAGTTCCTGGATACATGTTGCAAGGCTGCTGACAAGGAC705910.17488668697361623No Hit
AGCAGATTAAGAAACAAACGGCTCTTGCTGAGCTGGTGAAGCACAAGCCCAA664880.16472165068495698No Hit
CCTGCTTCTCGACTGAGGGTCCAAACCTTGTCACTAGATGCAAAGACGCCTT637090.15783677721525574No Hit
CCTCACCCGGCCCGGACACGGACAGGATTGACAGATTGATAGCTCTTTCTCG611460.15148703604834524No Hit
GTTGCAAGGCTGCTGACAAGGACACCTGCTTCTCGACTGAGGGTCCAAACCT580350.14377964440953972No Hit
CCTAAACACATCACAACCACAACCTTCTCAGGCTACCCTGAGAAAAAAAGAC516580.12798085415538904No Hit
CTTCACCTTCCACTCTGATATCTGCACACTTCCAGAGAAGGAGAAGCAGATT452460.11209535264847136No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)