FastQCFastQC Report
Wed 3 Mar 2021
TC3_D2_fPM_2.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameTC3_D2_fPM_2.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences44969623
Sequences flagged as poor quality0
Sequence length101
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CCCCACTAGCCTCTGGCAAAATGAAGTGGGTAACCTTTCTCCTCCTCCTC1274230.28335349842714935No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG555150.12345000090394354No Hit
CACGATCACAAGAAAGACGTGGTCCTGACAGACAGACAATCCTATTCCCT543420.12084157343280374No Hit
CAACATTTCAAAGGCCTAGTCCTGATTGCCTTTTCCCAGTATCTCCAGAA476250.10590482379627687No Hit
CCACGATCACAAGAAAGACGTGGTCCTGACAGACAGACAATCCTATTCCC460200.1023357478447173No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)