FastQCFastQC Report
Wed 3 Mar 2021
TC3_D3_fPM_2.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameTC3_D3_fPM_2.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences44894283
Sequences flagged as poor quality0
Sequence length101
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CCCCACTAGCCTCTGGCAAAATGAAGTGGGTAACCTTTCTCCTCCTCCTC1357360.30234584657471864No Hit
CACGATCACAAGAAAGACGTGGTCCTGACAGACAGACAATCCTATTCCCT538270.11989722611228694No Hit
CCACGATCACAAGAAAGACGTGGTCCTGACAGACAGACAATCCTATTCCC519450.11570515559854247No Hit
CAACATTTCAAAGGCCTAGTCCTGATTGCCTTTTCCCAGTATCTCCAGAA480330.10699135121503109No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)