FastQCFastQC Report
Sun 7 Feb 2021
TC6_B3_mPM_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameTC6_B3_mPM_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences68839766
Sequences flagged as poor quality0
Sequence length50
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CCTCACCCGGCCCGGACACGGACAGGATTGACAGATTGATAGCTCTTTCT1164770.16920016840266425No Hit
GCCACGATCACAAGAAAGACGTGGTCCTGACAGACAGACAATCCTATTCC1065410.15476665042702206No Hit
CCACGATCACAAGAAAGACGTGGTCCTGACAGACAGACAATCCTATTCCC896690.130257560724422No Hit
CACGATCACAAGAAAGACGTGGTCCTGACAGACAGACAATCCTATTCCCT699320.10158663235432847No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)