FastQCFastQC Report
Sun 7 Feb 2021
TC6_B4_mPM_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameTC6_B4_mPM_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences51775626
Sequences flagged as poor quality0
Sequence length50
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GCCACGATCACAAGAAAGACGTGGTCCTGACAGACAGACAATCCTATTCC1111530.21468209771138258No Hit
CCACGATCACAAGAAAGACGTGGTCCTGACAGACAGACAATCCTATTCCC977330.18876256561340274No Hit
CACGATCACAAGAAAGACGTGGTCCTGACAGACAGACAATCCTATTCCCT768270.14838449273409074No Hit
CTTTAATGTAGAAAAGATTAATGGGGAATGGCATACTATTATCCTGGCCT668990.12920944693165082No Hit
CGATCACAAGAAAGACGTGGTCCTGACAGACAGACAATCCTATTCCCTAC568300.1097620722152157No Hit
CACAAGAAAGACGTGGTCCTGACAGACAGACAATCCTATTCCCTACCAAA557690.1077128454226705No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)