FastQCFastQC Report
Thu 19 Nov 2020
C_F_A4_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameC_F_A4_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences33742225
Sequences flagged as poor quality0
Sequence length51
%GC51

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ACGACTTTTACTTCCTCTAGATAGTCAAGTTCGACCGTCTTCTCAGCGCTC647960.19203238672019998No Hit
GTCGGCATGTATTAGCTCTAGAATTACCACAGTTATCCAAGTAGGAGAGGA354650.105105694719302No Hit
CTTTTACTTCCTCTAGATAGTCAAGTTCGACCGTCTTCTCAGCGCTCCGCC339180.10052093482276288No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.7)