FastQCFastQC Report
Thu 19 Nov 2020
C_F_A6_2.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameC_F_A6_2.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences40217174
Sequences flagged as poor quality0
Sequence length51
%GC51

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CCTCACCCGGCCCGGACACGGACAGGATTGACAGATTGATAGCTCTTTCTC1122240.27904496720729305No Hit
CCTGCCAGTAGCATATGCTTGTCTCAAAGATTAAGCCATGCATGTCTAAGT921070.22902404828345221No Hit
CCCCACTAGCCTCTGGCAAAATGAAGTGGGTAACCTTTCTCCTCCTCCTCT598010.14869518181461483No Hit
TCCTGCCAGTAGCATATGCTTGTCTCAAAGATTAAGCCATGCATGTCTAAG470470.11698236181388577No Hit
CAACCCCACTAGCCTCTGGCAAAATGAAGTGGGTAACCTTTCTCCTCCTCC436310.10848847808152806No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.7)