FastQCFastQC Report
Thu 19 Nov 2020
TCDD_F_A4_2.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameTCDD_F_A4_2.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences41767537
Sequences flagged as poor quality0
Sequence length51
%GC51

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CCTCACCCGGCCCGGACACGGACAGGATTGACAGATTGATAGCTCTTTCTC1324050.31700456744672306No Hit
CCTGCCAGTAGCATATGCTTGTCTCAAAGATTAAGCCATGCATGTCTAAGT1117100.267456517725716No Hit
TCCTGCCAGTAGCATATGCTTGTCTCAAAGATTAAGCCATGCATGTCTAAG671340.16073248465668444No Hit
CCCCACTAGCCTCTGGCAAAATGAAGTGGGTAACCTTTCTCCTCCTCCTCT519720.12443156511718657No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.7)