FastQCFastQC Report
Thu 19 Nov 2020
TCDD_F_A5_2.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameTCDD_F_A5_2.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences40225198
Sequences flagged as poor quality0
Sequence length51
%GC51

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CCTCACCCGGCCCGGACACGGACAGGATTGACAGATTGATAGCTCTTTCTC1213650.3017138660200007No Hit
CCTGCCAGTAGCATATGCTTGTCTCAAAGATTAAGCCATGCATGTCTAAGT928460.23081552016226245No Hit
TCCTGCCAGTAGCATATGCTTGTCTCAAAGATTAAGCCATGCATGTCTAAG656450.1631937274740077No Hit
CCCCACTAGCCTCTGGCAAAATGAAGTGGGTAACCTTTCTCCTCCTCCTCT491300.12213737269857565No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.7)