FastQCFastQC Report
Thu 19 Nov 2020
TCDD_M_A9_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameTCDD_M_A9_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences31475018
Sequences flagged as poor quality0
Sequence length51
%GC51

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ACGACTTTTACTTCCTCTAGATAGTCAAGTTCGACCGTCTTCTCAGCGCTC706480.2244573775938746No Hit
CTTTTACTTCCTCTAGATAGTCAAGTTCGACCGTCTTCTCAGCGCTCCGCC349680.11109763304980476No Hit
GTCGGCATGTATTAGCTCTAGAATTACCACAGTTATCCAAGTAGGAGAGGA328930.10450510306300699No Hit
CCGTCGGCATGTATTAGCTCTAGAATTACCACAGTTATCCAAGTAGGAGAG324770.10318341994276223No Hit
GTTCGTTATCGGAATTAACCAGACAAATCGCTCCACCAACTAAGAACGGCC322090.1023319510095276No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.7)