-----------------------
Need shift 5 command (have more than 9 arguments):
-----------------------
-----------------------
Start of variable list:
-----------------------
SCRIPT_DIR:
/net/waxman-server/mnt/data/waxmanlabvm_home/kkarri/G170/Scripts/09b_DiffExp_3_featureCounts
Dataset_DIR:
/net/waxman-server/mnt/data/waxmanlabvm_home/kkarri/G170
Dataset_Label:
G170
GTF_Files_DIR:
/unprotected/projects/waxmanlab/routines/GTF_Files
ANNOTATION_FILE:
RefSeq_GeneBody.gtf
CONDITION_1_NAME:
F_Placebo_TD227
CONDITION_2_NAME:
F_CPA_7cycle_TD227
Lengths_DIR:
/unprotected/projects/waxmanlab/routines/GTF_Files/lengths
GENE_LENGTHS_FILE:
Exon_Regions_Lengths.txt
COUNT_DIR:
RefSeq_Exon_GTF
OUTPUT_PREFIX:
DiffExp_v2_GeneBody
DiffExp_Index:
DiffExp_3a
COL_SUFFIX:
GeneBody
COUNT_PROGRAM:
featureCounts
-----------------------
End of variable list
-----------------------
==========================================================
Starting on : Mon Sep 16 10:09:15 EDT 2019
Running on node : scc-kb1
Current directory : /net/waxman-server/mnt/data/waxmanlabvm_home/kkarri/G170/Scripts/09b_DiffExp_3_featureCounts
Current job ID : 9373312
Current job name : Step_09b_DiffExp_3a
Task index number : undefined
Parameter for multiple cores : 1
==========================================================

Change dir to scratch directory


Print scratch directory location:

/scratch/9373312.1.linga

Loading required modules...

------------------------------------------
Sample_DIR:
G170_M7
Sample_ID:
G170_M7
Description:
F_Placebo1_TD227
M_Num:
M7
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: G170_M7
Sample_DIR:
G170_M8
Sample_ID:
G170_M8
Description:
F_Placebo2_TD227
M_Num:
M8
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: G170_M8
Sample_DIR:
G170_M9
Sample_ID:
G170_M9
Description:
F_Placebo3_TD227
M_Num:
M9
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: G170_M9
M_Num_Cond1_List:
M7M8M9
------------------------------------------
------------------------------------------
Sample_DIR:
G170_M16
Sample_ID:
G170_M16
Description:
F_CPA_7cycle10_TD227
M_Num:
M16
Copy Condition_2 sample count files to Condition_2 folder
calculate mapped reads: G170_M16
Sample_DIR:
G170_M17
Sample_ID:
G170_M17
Description:
F_CPA_7cycle11_TD227
M_Num:
M17
Copy Condition_2 sample count files to Condition_2 folder
calculate mapped reads: G170_M17
M_Num_Cond2_List:
M16M17
------------------------------------------
==========================================================

Number of replicates in each condition:

NUM_REP_CONDITION1: 3
NUM_REP_CONDITION1: 3
==========================================================

Renaming input count files

Counting program: Not HTSeq
No lines removed.
Counting program: Not HTSeq
No lines removed.
Counting program: Not HTSeq
No lines removed.
Counting program: Not HTSeq
No lines removed.
Counting program: Not HTSeq
No lines removed.
number of mapped reads
60501929
42192838
36624937
57487914
56185788
==========================================================

List files in Input

-rw-r--r-- 1 kkarri waxmanlab 291522 Sep 16 10:09 /scratch/9373312.1.linga/Input/Exon_Regions_Lengths.txt
-rw-r--r-- 1 kkarri waxmanlab 257784 Sep 16 10:09 /scratch/9373312.1.linga/Input/F_CPA_7cycle_TD2270.out
-rw-r--r-- 1 kkarri waxmanlab      9 Sep 16 10:09 /scratch/9373312.1.linga/Input/F_CPA_7cycle_TD2270_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab 255349 Sep 16 10:09 /scratch/9373312.1.linga/Input/F_CPA_7cycle_TD2271.out
-rw-r--r-- 1 kkarri waxmanlab      9 Sep 16 10:09 /scratch/9373312.1.linga/Input/F_CPA_7cycle_TD2271_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab 254109 Sep 16 10:09 /scratch/9373312.1.linga/Input/F_Placebo_TD2270.out
-rw-r--r-- 1 kkarri waxmanlab      9 Sep 16 10:09 /scratch/9373312.1.linga/Input/F_Placebo_TD2270_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab 257155 Sep 16 10:09 /scratch/9373312.1.linga/Input/F_Placebo_TD2271.out
-rw-r--r-- 1 kkarri waxmanlab      9 Sep 16 10:09 /scratch/9373312.1.linga/Input/F_Placebo_TD2271_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab 256961 Sep 16 10:09 /scratch/9373312.1.linga/Input/F_Placebo_TD2272.out
-rw-r--r-- 1 kkarri waxmanlab      9 Sep 16 10:09 /scratch/9373312.1.linga/Input/F_Placebo_TD2272_num_mapped_reads.txt

/scratch/9373312.1.linga/Input/F_CPA_7cycle_TD227:
total 8
drwxr-xr-x 2 kkarri waxmanlab 4096 Sep 16 10:09 .
drwxr-xr-x 4 kkarri waxmanlab 4096 Sep 16 10:09 ..

/scratch/9373312.1.linga/Input/F_Placebo_TD227:
total 8
drwxr-xr-x 2 kkarri waxmanlab 4096 Sep 16 10:09 .
drwxr-xr-x 4 kkarri waxmanlab 4096 Sep 16 10:09 ..
==========================================================

Starting to run my commands

Printing Rscript command:
Rscript differentialAnalysis.R F_Placebo_TD227 F_CPA_7cycle_TD227 3 2 RefSeq_GeneBody.gtf /scratch/9373312.1.linga/Input DiffExp_v2_GeneBody Exon_Regions_Lengths.txt
[1] "Arguments for differentialAnalysisDESeq.R:"
[1] "F_Placebo_TD227"
[1] "F_CPA_7cycle_TD227"
[1] 3
[1] 2
[1] "RefSeq_GeneBody.gtf"
[1] "/scratch/9373312.1.linga/Input"
[1] "DiffExp_v2_GeneBody"
[1] "Exon_Regions_Lengths.txt"
[1] "sum1:214412.983148717" "sum1:218948.443771197" "sum1:210400.320518929"
[4] "sum1:214587.249146281"
[1] "sum2:248115.595127921" "sum2:270101.980452701" "sum2:259108.787790311"
load GTF file ... 
parse attributes ... 
[1] "output file is in: /scratch/9373312.1.linga/Input/DiffExp_v2_GeneBody_F_Placebo_TD227_F_CPA_7cycle_TD227.txt"
==========================================================

Create SEGEX formatted file:

Printing Rscript command:
Rscript formatForSegex_ver3.R  DiffExp_v2_GeneBody_F_Placebo_TD227_F_CPA_7cycle_TD227.txt F_CPA_7cycle_TD227_G170_M16M17_vs_F_Placebo_TD227_G170_M7M8M9_DiffExp_v2_GeneBody_forSEGEXUpload 1 GeneBody
Printing Rscript command:
Rscript formatForSegex_ver4.R  DiffExp_v2_GeneBody_F_Placebo_TD227_F_CPA_7cycle_TD227.txt F_CPA_7cycle_TD227_G170_M16M17_vs_F_Placebo_TD227_G170_M7M8M9_DiffExp_v2_GeneBody_forSEGEXUpload 1 GeneBody
==========================================================
Comparison_Info:
F_CPA_7cycle_TD227_G170_M16M17_F_Placebo_TD227_G170_M7M8M9
#----------------------------------------------------------------------------------
Running Diff_Genes.R
#----------------------------------------------------------------------------------
Printing Rscript command:
Rscript Diff_Genes.R F_CPA_7cycle_TD227_G170_M16M17_vs_F_Placebo_TD227_G170_M7M8M9_DiffExp_v2_GeneBody_forSEGEXUpload_DESeq.txt 2 0.05 DESeq GeneBody'_'F_CPA_7cycle_TD227_G170_M16M17_F_Placebo_TD227_G170_M7M8M9
[1] "Print arguments:"
[1] "-----------------"
[1] "Differential expression_Output:"
[1] "F_CPA_7cycle_TD227_G170_M16M17_vs_F_Placebo_TD227_G170_M7M8M9_DiffExp_v2_GeneBody_forSEGEXUpload_DESeq.txt"
[1] "fold_change_cutoff:"
[1] "2"
[1] "padj_cutoff:"
[1] "0.05"
[1] "postfix:"
[1] "DESeq"
[1] "count_method:"
[1] "GeneBody_F_CPA_7cycle_TD227_G170_M16M17_F_Placebo_TD227_G170_M7M8M9"
[1] "-----------------"
[1] "Differential Gene Counts"
[1] "Number of significant differential genes with positive fold change (Up Genes):"
[1] 703   7
[1] "Number of significant differential genes with negative fold change (Down Genes):"
[1] 546   7
[1] "Check out Up_Genes_DESeq_GeneBody_F_CPA_7cycle_TD227_G170_M16M17_F_Placebo_TD227_G170_M7M8M9.txt!"
[1] "Check out Down_Genes_DESeq_GeneBody_F_CPA_7cycle_TD227_G170_M16M17_F_Placebo_TD227_G170_M7M8M9.txt!"
Rscript Diff_Genes.R F_CPA_7cycle_TD227_G170_M16M17_vs_F_Placebo_TD227_G170_M7M8M9_DiffExp_v2_GeneBody_forSEGEXUpload_EdgeR.txt 2 0.05 EdgeR GeneBody'_'F_CPA_7cycle_TD227_G170_M16M17_F_Placebo_TD227_G170_M7M8M9
[1] "Print arguments:"
[1] "-----------------"
[1] "Differential expression_Output:"
[1] "F_CPA_7cycle_TD227_G170_M16M17_vs_F_Placebo_TD227_G170_M7M8M9_DiffExp_v2_GeneBody_forSEGEXUpload_EdgeR.txt"
[1] "fold_change_cutoff:"
[1] "2"
[1] "padj_cutoff:"
[1] "0.05"
[1] "postfix:"
[1] "EdgeR"
[1] "count_method:"
[1] "GeneBody_F_CPA_7cycle_TD227_G170_M16M17_F_Placebo_TD227_G170_M7M8M9"
[1] "-----------------"
[1] "Differential Gene Counts"
[1] "Number of significant differential genes with positive fold change (Up Genes):"
[1] 805   7
[1] "Number of significant differential genes with negative fold change (Down Genes):"
[1] 464   7
[1] "Check out Up_Genes_EdgeR_GeneBody_F_CPA_7cycle_TD227_G170_M16M17_F_Placebo_TD227_G170_M7M8M9.txt!"
[1] "Check out Down_Genes_EdgeR_GeneBody_F_CPA_7cycle_TD227_G170_M16M17_F_Placebo_TD227_G170_M7M8M9.txt!"
#----------------------------------------------------------------------------------
Running Venn_Diff_Genes.R
#----------------------------------------------------------------------------------
Printing Rscript command:
#----------------------------------------------------------------------------------
Rscript Venn_Diff_Genes.R Down_Genes_DESeq_GeneBody_F_CPA_7cycle_TD227_G170_M16M17_F_Placebo_TD227_G170_M7M8M9.txt Down_Genes_EdgeR_GeneBody_F_CPA_7cycle_TD227_G170_M16M17_F_Placebo_TD227_G170_M7M8M9.txt GeneBody_Counting DiffExp_3a
[1] "Print arguments:"
[1] "-----------------"
[1] "File1:"
[1] "Down_Genes_DESeq_GeneBody_F_CPA_7cycle_TD227_G170_M16M17_F_Placebo_TD227_G170_M7M8M9.txt"
[1] "File2:"
[1] "Down_Genes_EdgeR_GeneBody_F_CPA_7cycle_TD227_G170_M16M17_F_Placebo_TD227_G170_M7M8M9.txt"
[1] "Subtitle:"
[1] "GeneBody_Counting"
[1] "DiffExp_Index:"
[1] "DiffExp_3a"
[1] "-----------------"
[1] "Down.DESeq.GeneBody.HTSeq"
[1] "Down.EdgeR.GeneBody.HTSeq"
null device 
          1 
[1] "Removing VennDiagram*.log files"
[1] "Check out Venn diagram and Count.Table!"
#----------------------------------------------------------------------------------
Rscript Venn_Diff_Genes.R Up_Genes_DESeq_GeneBody_F_CPA_7cycle_TD227_G170_M16M17_F_Placebo_TD227_G170_M7M8M9.txt Up_Genes_EdgeR_GeneBody_F_CPA_7cycle_TD227_G170_M16M17_F_Placebo_TD227_G170_M7M8M9.txt GeneBody_Counting DiffExp_3a
[1] "Print arguments:"
[1] "-----------------"
[1] "File1:"
[1] "Up_Genes_DESeq_GeneBody_F_CPA_7cycle_TD227_G170_M16M17_F_Placebo_TD227_G170_M7M8M9.txt"
[1] "File2:"
[1] "Up_Genes_EdgeR_GeneBody_F_CPA_7cycle_TD227_G170_M16M17_F_Placebo_TD227_G170_M7M8M9.txt"
[1] "Subtitle:"
[1] "GeneBody_Counting"
[1] "DiffExp_Index:"
[1] "DiffExp_3a"
[1] "-----------------"
[1] "Up.DESeq.GeneBody.HTSeq"
[1] "Up.EdgeR.GeneBody.HTSeq"
null device 
          1 
[1] "Removing VennDiagram*.log files"
[1] "Check out Venn diagram and Count.Table!"
#----------------------------------------------------------------------------------
#----------------------------------------------------------------------------------
Merging Count.Table(s) into one text file
#----------------------------------------------------------------------------------
Comparison_Info:
F_CPA_7cycle_TD227_G170_M16M17_F_Placebo_TD227_G170_M7M8M9
#----------------------------------------------------------------------------------
==========================================================
Renaming the Differential_Expression_File
==========================================================

List files in Input

-rw-r--r-- 1 kkarri waxmanlab      297 Sep 16 10:10 /scratch/9373312.1.linga/Input/DiffExp_3a_Venn_Tables_F_CPA_7cycle_TD227_G170_M16M17_F_Placebo_TD227_G170_M7M8M9.txt
-rw-r--r-- 1 kkarri waxmanlab 11064392 Sep 16 10:10 /scratch/9373312.1.linga/Input/DiffExp_v2_GeneBody_F_Placebo_TD227_F_CPA_7cycle_TD227.txt
-rwxr-xr-x 1 kkarri waxmanlab     7394 Sep 16 10:09 /scratch/9373312.1.linga/Input/Diff_Genes.R
-rw-r--r-- 1 kkarri waxmanlab   124957 Sep 16 10:10 /scratch/9373312.1.linga/Input/Down_Genes_DESeq_GeneBody_F_CPA_7cycle_TD227_G170_M16M17_F_Placebo_TD227_G170_M7M8M9.txt
-rw-r--r-- 1 kkarri waxmanlab    68649 Sep 16 10:10 /scratch/9373312.1.linga/Input/Down_Genes_EdgeR_GeneBody_F_CPA_7cycle_TD227_G170_M16M17_F_Placebo_TD227_G170_M7M8M9.txt
-rw-r--r-- 1 kkarri waxmanlab   291522 Sep 16 10:09 /scratch/9373312.1.linga/Input/Exon_Regions_Lengths.txt
-rw-r--r-- 1 kkarri waxmanlab   257784 Sep 16 10:09 /scratch/9373312.1.linga/Input/F_CPA_7cycle_TD2270.out
-rw-r--r-- 1 kkarri waxmanlab        9 Sep 16 10:09 /scratch/9373312.1.linga/Input/F_CPA_7cycle_TD2270_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab   255349 Sep 16 10:09 /scratch/9373312.1.linga/Input/F_CPA_7cycle_TD2271.out
-rw-r--r-- 1 kkarri waxmanlab        9 Sep 16 10:09 /scratch/9373312.1.linga/Input/F_CPA_7cycle_TD2271_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab  6201500 Sep 16 10:10 /scratch/9373312.1.linga/Input/F_CPA_7cycle_TD227_G170_M16M17_vs_F_Placebo_TD227_G170_M7M8M9_DiffExp_v2_GeneBody_forSEGEXUpload_DESeq.txt
-rw-r--r-- 1 kkarri waxmanlab  5209423 Sep 16 10:10 /scratch/9373312.1.linga/Input/F_CPA_7cycle_TD227_G170_M16M17_vs_F_Placebo_TD227_G170_M7M8M9_DiffExp_v2_GeneBody_forSEGEXUpload_EdgeR.txt
-rw-r--r-- 1 kkarri waxmanlab  6201498 Sep 16 10:10 /scratch/9373312.1.linga/Input/F_CPA_7cycle_TD227_G170_M16M17_vs_F_Placebo_TD227_G170_M7M8M9_DiffExp_v2_GeneBody_forSEGEXUpload_TPM_DESeq.txt
-rw-r--r-- 1 kkarri waxmanlab  5209421 Sep 16 10:10 /scratch/9373312.1.linga/Input/F_CPA_7cycle_TD227_G170_M16M17_vs_F_Placebo_TD227_G170_M7M8M9_DiffExp_v2_GeneBody_forSEGEXUpload_TPM_EdgeR.txt
-rw-r--r-- 1 kkarri waxmanlab   254109 Sep 16 10:09 /scratch/9373312.1.linga/Input/F_Placebo_TD2270.out
-rw-r--r-- 1 kkarri waxmanlab        9 Sep 16 10:09 /scratch/9373312.1.linga/Input/F_Placebo_TD2270_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab   257155 Sep 16 10:09 /scratch/9373312.1.linga/Input/F_Placebo_TD2271.out
-rw-r--r-- 1 kkarri waxmanlab        9 Sep 16 10:09 /scratch/9373312.1.linga/Input/F_Placebo_TD2271_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab   256961 Sep 16 10:09 /scratch/9373312.1.linga/Input/F_Placebo_TD2272.out
-rw-r--r-- 1 kkarri waxmanlab        9 Sep 16 10:09 /scratch/9373312.1.linga/Input/F_Placebo_TD2272_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab   146211 Sep 16 10:10 /scratch/9373312.1.linga/Input/Up_Genes_DESeq_GeneBody_F_CPA_7cycle_TD227_G170_M16M17_F_Placebo_TD227_G170_M7M8M9.txt
-rw-r--r-- 1 kkarri waxmanlab   150535 Sep 16 10:10 /scratch/9373312.1.linga/Input/Up_Genes_EdgeR_GeneBody_F_CPA_7cycle_TD227_G170_M16M17_F_Placebo_TD227_G170_M7M8M9.txt
-rwxr-xr-x 1 kkarri waxmanlab     9553 Sep 16 10:09 /scratch/9373312.1.linga/Input/Venn_Diff_Genes.R
-rw-r--r-- 1 kkarri waxmanlab    42767 Sep 16 10:10 /scratch/9373312.1.linga/Input/Venn_Down.DESeq.GeneBody.HTSeq.Down.EdgeR.GeneBody.HTSeq.png
-rw-r--r-- 1 kkarri waxmanlab    40982 Sep 16 10:10 /scratch/9373312.1.linga/Input/Venn_Up.DESeq.GeneBody.HTSeq.Up.EdgeR.GeneBody.HTSeq.png
-rwxr-xr-x 1 kkarri waxmanlab     3925 Sep 16 10:09 /scratch/9373312.1.linga/Input/formatForSegex_ver3.R
-rwxr-xr-x 1 kkarri waxmanlab     3929 Sep 16 10:09 /scratch/9373312.1.linga/Input/formatForSegex_ver4.R

/scratch/9373312.1.linga/Input/F_CPA_7cycle_TD227:
total 8
drwxr-xr-x 2 kkarri waxmanlab 4096 Sep 16 10:09 .
drwxr-xr-x 4 kkarri waxmanlab 4096 Sep 16 10:10 ..

/scratch/9373312.1.linga/Input/F_Placebo_TD227:
total 8
drwxr-xr-x 2 kkarri waxmanlab 4096 Sep 16 10:09 .
drwxr-xr-x 4 kkarri waxmanlab 4096 Sep 16 10:10 ..
==========================================================

List files in scratch

total 72M
drwx------   3 kkarri waxmanlab 4.0K Sep 16 10:10 .
drwxrwxrwt. 46 root   root      4.0K Sep 16 10:09 ..
-rw-r--r--   1 kkarri waxmanlab  132 Sep 16 10:09 Condition_1.txt
-rw-r--r--   1 kkarri waxmanlab  111 Sep 16 10:09 Condition_2.txt
drwxr-xr-x   4 kkarri waxmanlab 4.0K Sep 16 10:10 Input
-rw-r--r--   1 kkarri waxmanlab  72M Sep 16 10:09 RefSeq_GeneBody.gtf
-rwxr-xr-x   1 kkarri waxmanlab  17K Sep 16 10:09 differentialAnalysis.R

==========================================================
Re-naming files in OUTPUT_DIR
Need to append the COUNT_PROGRAM name to all output files

List files in OUTPUT_DIR

total 66M
drwxr-xr-x 2 kkarri waxmanlab 4.0K Sep 16 10:05 .
drwxr-xr-x 6 kkarri waxmanlab 4.0K Sep 16 10:03 ..
-rw-r--r-- 1 kkarri waxmanlab  297 Sep 16 10:05 DiffExp_3a_Venn_Tables_F_CPA_7cycle_TD227_G170_M16M17_F_Placebo_TD227_G170_M7M8M9_featureCounts.txt
-rw-r--r-- 1 kkarri waxmanlab  11M Sep 16 10:05 DiffExp_v2_GeneBody_F_Placebo_TD227_F_CPA_7cycle_TD227_featureCounts.txt
-rw-r--r-- 1 kkarri waxmanlab 123K Sep 16 10:05 Down_Genes_DESeq_GeneBody_F_CPA_7cycle_TD227_G170_M16M17_F_Placebo_TD227_G170_M7M8M9_featureCounts.txt
-rw-r--r-- 1 kkarri waxmanlab  68K Sep 16 10:05 Down_Genes_EdgeR_GeneBody_F_CPA_7cycle_TD227_G170_M16M17_F_Placebo_TD227_G170_M7M8M9_featureCounts.txt
-rw-r--r-- 1 kkarri waxmanlab 6.0M Sep 16 10:05 F_CPA_7cycle_TD227_G170_M16M17_vs_F_Placebo_TD227_G170_M7M8M9_DiffExp_v2_GeneBody_forSEGEXUpload_DESeq_featureCounts.txt
-rw-r--r-- 1 kkarri waxmanlab 5.0M Sep 16 10:05 F_CPA_7cycle_TD227_G170_M16M17_vs_F_Placebo_TD227_G170_M7M8M9_DiffExp_v2_GeneBody_forSEGEXUpload_EdgeR_featureCounts.txt
-rw-r--r-- 1 kkarri waxmanlab 6.0M Sep 16 10:05 F_CPA_7cycle_TD227_G170_M16M17_vs_F_Placebo_TD227_G170_M7M8M9_DiffExp_v2_GeneBody_forSEGEXUpload_TPM_DESeq_featureCounts.txt
-rw-r--r-- 1 kkarri waxmanlab 5.0M Sep 16 10:05 F_CPA_7cycle_TD227_G170_M16M17_vs_F_Placebo_TD227_G170_M7M8M9_DiffExp_v2_GeneBody_forSEGEXUpload_TPM_EdgeR_featureCounts.txt
-rw-r--r-- 1 kkarri waxmanlab 143K Sep 16 10:05 Up_Genes_DESeq_GeneBody_F_CPA_7cycle_TD227_G170_M16M17_F_Placebo_TD227_G170_M7M8M9_featureCounts.txt
-rw-r--r-- 1 kkarri waxmanlab 148K Sep 16 10:05 Up_Genes_EdgeR_GeneBody_F_CPA_7cycle_TD227_G170_M16M17_F_Placebo_TD227_G170_M7M8M9_featureCounts.txt
-rw-r--r-- 1 kkarri waxmanlab  42K Sep 16 10:05 Venn_Down.DESeq.GeneBody.HTSeq.Down.EdgeR.GeneBody.HTSeq_featureCounts.png
-rw-r--r-- 1 kkarri waxmanlab  41K Sep 16 10:05 Venn_Up.DESeq.GeneBody.HTSeq.Up.EdgeR.GeneBody.HTSeq_featureCounts.png
==========================================================
==========================================================
Finished on : Mon Sep 16 10:10:41 EDT 2019
1 minutes and 26 seconds elapsed.
==========================================================
