/share/pkg.7/cellranger/3.1.0/install/bin/cellranger-cs/3.1.0/bin/count --id=10X_TCPO_premRNA_Transcript --transcriptome=/net/waxman-server/mnt/data/waxmanlabvm_home/kkarri/G171/ref/mm10_ensmbl/mm10_premrna_v1.0_ensembl_usethis --fastqs=/net/waxman-server/mnt/data/waxmanlabvm_home/kkarri/G172/G172/outs/fastq_path/HM3TJBGXC/TCPO --sample=TCPO