========================================================== Starting on : Tue Oct 15 19:02:09 EDT 2019 Running on node : scc-wk3 Current job ID : 44493 Current job name : bamtofastq_10X_Nash_1.qsub Task index number : ========================================================== bamtofastq v1.1.2 [W::bam_hdr_read] EOF marker is absent. The input is probably truncated. Args { arg_bam: "/net/waxman-server/mnt/data/waxmanlabvm_home/kkarri/NASH/data/NASH1/10X_Nash_1.bam", arg_output_path: "/net/waxman-server/mnt/data/waxmanlabvm_home/kkarri/NASH/data/NASH1/10X_Nash_1", flag_locus: None, flag_bx_list: None, flag_reads_per_fastq: 50000000, flag_gemcode: false, flag_lr20: false, flag_cr11: false } [E::bgzf_read] bgzf_read_block error -1 after 0 of 4 bytes thread 'main' panicked at 'called `Result::unwrap()` on an `Err` value: Truncated', /checkout/src/libcore/result.rs:916:5 note: Run with `RUST_BACKTRACE=1` for a backtrace. Finished .............. Tue Oct 15 19:23:52 EDT 2019