-----------------------
Need shift 5 command (have more than 9 arguments):
-----------------------
-----------------------
Start of variable list:
-----------------------
SCRIPT_DIR:
/restricted/projectnb/waxmanlab/kkarri/tabula_muris/smartseq_fastq/Scripts/09b_DiffExp_2_featureCounts
Dataset_DIR:
/restricted/projectnb/waxmanlab/kkarri/tabula_muris/smartseq_fastq
Dataset_Label:
SRR
GTF_Files_DIR:
/restricted/projectnb/waxmanlab/kkarri/tabula_muris/GTF_Files
ANNOTATION_FILE:
RefSeq_GeneBody.gtf
CONDITION_1_NAME:
Hepatocyte
CONDITION_2_NAME:
NKCell
Lengths_DIR:
/restricted/projectnb/waxmanlab/kkarri/tabula_muris/GTF_Files/lengths
GENE_LENGTHS_FILE:
Intron_Only_Regions_Lengths.txt
COUNT_DIR:
RefSeq_Intron_GTF
OUTPUT_PREFIX:
DiffExp_v2_Intronic_Only
DiffExp_Index:
DiffExp_2c
COL_SUFFIX:
Intronic_Only
COUNT_PROGRAM:
featureCounts
-----------------------
End of variable list
-----------------------
==========================================================
Starting on : Thu Oct 18 23:11:54 EDT 2018
Running on node : scc-tk3
Current directory : /restricted/projectnb/waxmanlab/kkarri/tabula_muris/smartseq_fastq/Scripts/09b_DiffExp_2_featureCounts
Current job ID : 9022420
Current job name : Step_09b_DiffExp_2c
Task index number : undefined
Parameter for multiple cores : 1
==========================================================

Change dir to scratch directory


Print scratch directory location:

/scratch/9022420.1.linga

Loading required modules...

------------------------------------------
Sample_DIR:
SRR6575324
Sample_ID:
A10-MAA100041-3_9_M-1-1
Description:
hepatocyte
M_Num:
9
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: A10-MAA100041-3_9_M-1-1
Sample_DIR:
SRR6575742
Sample_ID:
A10-MAA100138-3_56_F-1-1
Description:
hepatocyte
M_Num:
56
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: A10-MAA100138-3_56_F-1-1
Sample_DIR:
SRR6575327
Sample_ID:
A11-MAA100041-3_9_M-1-1
Description:
hepatocyte
M_Num:
9
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: A11-MAA100041-3_9_M-1-1
Sample_DIR:
SRR6575744
Sample_ID:
A11-MAA100138-3_56_F-1-1
Description:
hepatocyte
M_Num:
56
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: A11-MAA100138-3_56_F-1-1
Sample_DIR:
SRR6575957
Sample_ID:
A11-MAA100140-3_57_F-1-1
Description:
hepatocyte
M_Num:
57
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: A11-MAA100140-3_57_F-1-1
Sample_DIR:
SRR6575538
Sample_ID:
A12-MAA100042-3_9_M-1-1
Description:
hepatocyte
M_Num:
9
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: A12-MAA100042-3_9_M-1-1
Sample_DIR:
SRR6575960
Sample_ID:
A12-MAA100140-3_57_F-1-1
Description:
hepatocyte
M_Num:
57
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: A12-MAA100140-3_57_F-1-1
Sample_DIR:
SRR6575726
Sample_ID:
A14-MAA000907-3_11_M-1-1
Description:
hepatocyte
M_Num:
11
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: A14-MAA000907-3_11_M-1-1
Sample_DIR:
SRR6575815
Sample_ID:
A18-MAA000907-3_11_M-1-1
Description:
hepatocyte
M_Num:
11
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: A18-MAA000907-3_11_M-1-1
Sample_DIR:
SRR6575437
Sample_ID:
A1-MAA000907-3_11_M-1-1
Description:
hepatocyte
M_Num:
11
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: A1-MAA000907-3_11_M-1-1
Sample_DIR:
SRR6576785
Sample_ID:
A1-MAA100039-3_11_M-1-1
Description:
hepatocyte
M_Num:
11
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: A1-MAA100039-3_11_M-1-1
Sample_DIR:
SRR6575722
Sample_ID:
A1-MAA100138-3_56_F-1-1
Description:
hepatocyte
M_Num:
56
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: A1-MAA100138-3_56_F-1-1
Sample_DIR:
SRR6575935
Sample_ID:
A1-MAA100140-3_57_F-1-1
Description:
hepatocyte
M_Num:
57
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: A1-MAA100140-3_57_F-1-1
Sample_DIR:
SRR6576787
Sample_ID:
A2-MAA100039-3_11_M-1-1
Description:
hepatocyte
M_Num:
11
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: A2-MAA100039-3_11_M-1-1
Sample_DIR:
SRR6576994
Sample_ID:
A2-MAA100040-3_11_M-1-1
Description:
hepatocyte
M_Num:
11
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: A2-MAA100040-3_11_M-1-1
Sample_DIR:
SRR6575724
Sample_ID:
A2-MAA100138-3_56_F-1-1
Description:
hepatocyte
M_Num:
56
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: A2-MAA100138-3_56_F-1-1
Sample_DIR:
SRR6575938
Sample_ID:
A2-MAA100140-3_57_F-1-1
Description:
hepatocyte
M_Num:
57
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: A2-MAA100140-3_57_F-1-1
Sample_DIR:
SRR6575482
Sample_ID:
A3-MAA000907-3_11_M-1-1
Description:
hepatocyte
M_Num:
11
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: A3-MAA000907-3_11_M-1-1
Sample_DIR:
SRR6576789
Sample_ID:
A3-MAA100039-3_11_M-1-1
Description:
hepatocyte
M_Num:
11
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: A3-MAA100039-3_11_M-1-1
Sample_DIR:
SRR6576996
Sample_ID:
A3-MAA100040-3_11_M-1-1
Description:
hepatocyte
M_Num:
11
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: A3-MAA100040-3_11_M-1-1
Sample_DIR:
SRR6575727
Sample_ID:
A3-MAA100138-3_56_F-1-1
Description:
hepatocyte
M_Num:
56
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: A3-MAA100138-3_56_F-1-1
Sample_DIR:
SRR6575940
Sample_ID:
A3-MAA100140-3_57_F-1-1
Description:
hepatocyte
M_Num:
57
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: A3-MAA100140-3_57_F-1-1
Sample_DIR:
SRR6576792
Sample_ID:
A4-MAA100039-3_11_M-1-1
Description:
hepatocyte
M_Num:
11
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: A4-MAA100039-3_11_M-1-1
Sample_DIR:
SRR6575311
Sample_ID:
A4-MAA100041-3_9_M-1-1
Description:
hepatocyte
M_Num:
9
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: A4-MAA100041-3_9_M-1-1
Sample_DIR:
SRR6575729
Sample_ID:
A4-MAA100138-3_56_F-1-1
Description:
hepatocyte
M_Num:
56
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: A4-MAA100138-3_56_F-1-1
Sample_DIR:
SRR6575942
Sample_ID:
A4-MAA100140-3_57_F-1-1
Description:
hepatocyte
M_Num:
57
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: A4-MAA100140-3_57_F-1-1
Sample_DIR:
SRR6575731
Sample_ID:
A5-MAA100138-3_56_F-1-1
Description:
hepatocyte
M_Num:
56
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: A5-MAA100138-3_56_F-1-1
Sample_DIR:
SRR6575944
Sample_ID:
A5-MAA100140-3_57_F-1-1
Description:
hepatocyte
M_Num:
57
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: A5-MAA100140-3_57_F-1-1
Sample_DIR:
SRR6576796
Sample_ID:
A6-MAA100039-3_11_M-1-1
Description:
hepatocyte
M_Num:
11
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: A6-MAA100039-3_11_M-1-1
Sample_DIR:
SRR6577003
Sample_ID:
A6-MAA100040-3_11_M-1-1
Description:
hepatocyte
M_Num:
11
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: A6-MAA100040-3_11_M-1-1
Sample_DIR:
SRR6575527
Sample_ID:
A6-MAA100042-3_9_M-1-1
Description:
hepatocyte
M_Num:
9
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: A6-MAA100042-3_9_M-1-1
Sample_DIR:
SRR6575733
Sample_ID:
A6-MAA100138-3_56_F-1-1
Description:
hepatocyte
M_Num:
56
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: A6-MAA100138-3_56_F-1-1
Sample_DIR:
SRR6575946
Sample_ID:
A6-MAA100140-3_57_F-1-1
Description:
hepatocyte
M_Num:
57
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: A6-MAA100140-3_57_F-1-1
Sample_DIR:
SRR6577005
Sample_ID:
A7-MAA100040-3_11_M-1-1
Description:
hepatocyte
M_Num:
11
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: A7-MAA100040-3_11_M-1-1
Sample_DIR:
SRR6575529
Sample_ID:
A7-MAA100042-3_9_M-1-1
Description:
hepatocyte
M_Num:
9
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: A7-MAA100042-3_9_M-1-1
Sample_DIR:
SRR6575735
Sample_ID:
A7-MAA100138-3_56_F-1-1
Description:
hepatocyte
M_Num:
56
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: A7-MAA100138-3_56_F-1-1
Sample_DIR:
SRR6575949
Sample_ID:
A7-MAA100140-3_57_F-1-1
Description:
hepatocyte
M_Num:
57
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: A7-MAA100140-3_57_F-1-1
Sample_DIR:
SRR6575738
Sample_ID:
A8-MAA100138-3_56_F-1-1
Description:
hepatocyte
M_Num:
56
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: A8-MAA100138-3_56_F-1-1
Sample_DIR:
SRR6575951
Sample_ID:
A8-MAA100140-3_57_F-1-1
Description:
hepatocyte
M_Num:
57
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: A8-MAA100140-3_57_F-1-1
Sample_DIR:
SRR6577007
Sample_ID:
A9-MAA100040-3_11_M-1-1
Description:
hepatocyte
M_Num:
11
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: A9-MAA100040-3_11_M-1-1
Sample_DIR:
SRR6575531
Sample_ID:
A9-MAA100042-3_9_M-1-1
Description:
hepatocyte
M_Num:
9
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: A9-MAA100042-3_9_M-1-1
Sample_DIR:
SRR6575740
Sample_ID:
A9-MAA100138-3_56_F-1-1
Description:
hepatocyte
M_Num:
56
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: A9-MAA100138-3_56_F-1-1
Sample_DIR:
SRR6575953
Sample_ID:
A9-MAA100140-3_57_F-1-1
Description:
hepatocyte
M_Num:
57
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: A9-MAA100140-3_57_F-1-1
Sample_DIR:
SRR6576125
Sample_ID:
B10-MAA000907-3_11_M-1-1
Description:
hepatocyte
M_Num:
11
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: B10-MAA000907-3_11_M-1-1
Sample_DIR:
SRR6576832
Sample_ID:
B10-MAA100039-3_11_M-1-1
Description:
hepatocyte
M_Num:
11
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: B10-MAA100039-3_11_M-1-1
Sample_DIR:
SRR6575768
Sample_ID:
B10-MAA100138-3_56_F-1-1
Description:
hepatocyte
M_Num:
56
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: B10-MAA100138-3_56_F-1-1
Sample_DIR:
SRR6576148
Sample_ID:
B11-MAA000907-3_11_M-1-1
Description:
hepatocyte
M_Num:
11
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: B11-MAA000907-3_11_M-1-1
Sample_DIR:
SRR6576834
Sample_ID:
B11-MAA100039-3_11_M-1-1
Description:
hepatocyte
M_Num:
11
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: B11-MAA100039-3_11_M-1-1
Sample_DIR:
SRR6575562
Sample_ID:
B11-MAA100042-3_9_M-1-1
Description:
hepatocyte
M_Num:
9
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: B11-MAA100042-3_9_M-1-1
Sample_DIR:
SRR6575771
Sample_ID:
B11-MAA100138-3_56_F-1-1
Description:
hepatocyte
M_Num:
56
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: B11-MAA100138-3_56_F-1-1
Sample_DIR:
SRR6576837
Sample_ID:
B12-MAA100039-3_11_M-1-1
Description:
hepatocyte
M_Num:
11
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: B12-MAA100039-3_11_M-1-1
Sample_DIR:
SRR6575355
Sample_ID:
B12-MAA100041-3_9_M-1-1
Description:
hepatocyte
M_Num:
9
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: B12-MAA100041-3_9_M-1-1
Sample_DIR:
SRR6575564
Sample_ID:
B12-MAA100042-3_9_M-1-1
Description:
hepatocyte
M_Num:
9
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: B12-MAA100042-3_9_M-1-1
Sample_DIR:
SRR6575986
Sample_ID:
B12-MAA100140-3_57_F-1-1
Description:
hepatocyte
M_Num:
57
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: B12-MAA100140-3_57_F-1-1
Sample_DIR:
SRR6576491
Sample_ID:
B14-MAA000377-3_9_M-1-1
Description:
hepatocyte
M_Num:
9
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: B14-MAA000377-3_9_M-1-1
Sample_DIR:
SRR6576160
Sample_ID:
B16-MAA000907-3_11_M-1-1
Description:
hepatocyte
M_Num:
11
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: B16-MAA000907-3_11_M-1-1
Sample_DIR:
SRR6576811
Sample_ID:
B1-MAA100039-3_11_M-1-1
Description:
hepatocyte
M_Num:
11
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: B1-MAA100039-3_11_M-1-1
Sample_DIR:
SRR6577016
Sample_ID:
B1-MAA100040-3_11_M-1-1
Description:
hepatocyte
M_Num:
11
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: B1-MAA100040-3_11_M-1-1
Sample_DIR:
SRR6575749
Sample_ID:
B1-MAA100138-3_56_F-1-1
Description:
hepatocyte
M_Num:
56
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: B1-MAA100138-3_56_F-1-1
Sample_DIR:
SRR6575962
Sample_ID:
B1-MAA100140-3_57_F-1-1
Description:
hepatocyte
M_Num:
57
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: B1-MAA100140-3_57_F-1-1
Sample_DIR:
SRR6576173
Sample_ID:
B22-MAA000907-3_11_M-1-1
Description:
hepatocyte
M_Num:
11
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: B22-MAA000907-3_11_M-1-1
Sample_DIR:
SRR6577018
Sample_ID:
B2-MAA100040-3_11_M-1-1
Description:
hepatocyte
M_Num:
11
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: B2-MAA100040-3_11_M-1-1
Sample_DIR:
SRR6575751
Sample_ID:
B2-MAA100138-3_56_F-1-1
Description:
hepatocyte
M_Num:
56
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: B2-MAA100138-3_56_F-1-1
Sample_DIR:
SRR6575964
Sample_ID:
B2-MAA100140-3_57_F-1-1
Description:
hepatocyte
M_Num:
57
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: B2-MAA100140-3_57_F-1-1
Sample_DIR:
SRR6576816
Sample_ID:
B3-MAA100039-3_11_M-1-1
Description:
hepatocyte
M_Num:
11
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: B3-MAA100039-3_11_M-1-1
Sample_DIR:
SRR6577020
Sample_ID:
B3-MAA100040-3_11_M-1-1
Description:
hepatocyte
M_Num:
11
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: B3-MAA100040-3_11_M-1-1
Sample_DIR:
SRR6575335
Sample_ID:
B3-MAA100041-3_9_M-1-1
Description:
hepatocyte
M_Num:
9
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: B3-MAA100041-3_9_M-1-1
Sample_DIR:
SRR6575753
Sample_ID:
B3-MAA100138-3_56_F-1-1
Description:
hepatocyte
M_Num:
56
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: B3-MAA100138-3_56_F-1-1
Sample_DIR:
SRR6575966
Sample_ID:
B3-MAA100140-3_57_F-1-1
Description:
hepatocyte
M_Num:
57
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: B3-MAA100140-3_57_F-1-1
Sample_DIR:
SRR6576818
Sample_ID:
B4-MAA100039-3_11_M-1-1
Description:
hepatocyte
M_Num:
11
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: B4-MAA100039-3_11_M-1-1
Sample_DIR:
SRR6577022
Sample_ID:
B4-MAA100040-3_11_M-1-1
Description:
hepatocyte
M_Num:
11
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: B4-MAA100040-3_11_M-1-1
Sample_DIR:
SRR6575546
Sample_ID:
B4-MAA100042-3_9_M-1-1
Description:
hepatocyte
M_Num:
9
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: B4-MAA100042-3_9_M-1-1
Sample_DIR:
SRR6575755
Sample_ID:
B4-MAA100138-3_56_F-1-1
Description:
hepatocyte
M_Num:
56
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: B4-MAA100138-3_56_F-1-1
Sample_DIR:
SRR6575968
Sample_ID:
B4-MAA100140-3_57_F-1-1
Description:
hepatocyte
M_Num:
57
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: B4-MAA100140-3_57_F-1-1
Sample_DIR:
SRR6576820
Sample_ID:
B5-MAA100039-3_11_M-1-1
Description:
hepatocyte
M_Num:
11
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: B5-MAA100039-3_11_M-1-1
Sample_DIR:
SRR6575757
Sample_ID:
B5-MAA100138-3_56_F-1-1
Description:
hepatocyte
M_Num:
56
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: B5-MAA100138-3_56_F-1-1
Sample_DIR:
SRR6575971
Sample_ID:
B5-MAA100140-3_57_F-1-1
Description:
hepatocyte
M_Num:
57
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: B5-MAA100140-3_57_F-1-1
Sample_DIR:
SRR6576822
Sample_ID:
B6-MAA100039-3_11_M-1-1
Description:
hepatocyte
M_Num:
11
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: B6-MAA100039-3_11_M-1-1
Sample_DIR:
SRR6577027
Sample_ID:
B6-MAA100040-3_11_M-1-1
Description:
hepatocyte
M_Num:
11
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: B6-MAA100040-3_11_M-1-1
Sample_DIR:
SRR6575760
Sample_ID:
B6-MAA100138-3_56_F-1-1
Description:
hepatocyte
M_Num:
56
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: B6-MAA100138-3_56_F-1-1
Sample_DIR:
SRR6575973
Sample_ID:
B6-MAA100140-3_57_F-1-1
Description:
hepatocyte
M_Num:
57
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: B6-MAA100140-3_57_F-1-1
Sample_DIR:
SRR6576158
Sample_ID:
B7-MAA000377-3_9_M-1-1
Description:
hepatocyte
M_Num:
9
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: B7-MAA000377-3_9_M-1-1
Sample_DIR:
SRR6576059
Sample_ID:
B7-MAA000907-3_11_M-1-1
Description:
hepatocyte
M_Num:
11
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: B7-MAA000907-3_11_M-1-1
Sample_DIR:
SRR6576826
Sample_ID:
B7-MAA100039-3_11_M-1-1
Description:
hepatocyte
M_Num:
11
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: B7-MAA100039-3_11_M-1-1
Sample_DIR:
SRR6577029
Sample_ID:
B7-MAA100040-3_11_M-1-1
Description:
hepatocyte
M_Num:
11
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: B7-MAA100040-3_11_M-1-1
Sample_DIR:
SRR6575344
Sample_ID:
B7-MAA100041-3_9_M-1-1
Description:
hepatocyte
M_Num:
9
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: B7-MAA100041-3_9_M-1-1
Sample_DIR:
SRR6575762
Sample_ID:
B7-MAA100138-3_56_F-1-1
Description:
hepatocyte
M_Num:
56
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: B7-MAA100138-3_56_F-1-1
Sample_DIR:
SRR6576269
Sample_ID:
B8-MAA000377-3_9_M-1-1
Description:
hepatocyte
M_Num:
9
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: B8-MAA000377-3_9_M-1-1
Sample_DIR:
SRR6577031
Sample_ID:
B8-MAA100040-3_11_M-1-1
Description:
hepatocyte
M_Num:
11
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: B8-MAA100040-3_11_M-1-1
Sample_DIR:
SRR6575764
Sample_ID:
B8-MAA100138-3_56_F-1-1
Description:
hepatocyte
M_Num:
56
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: B8-MAA100138-3_56_F-1-1
Sample_DIR:
SRR6576830
Sample_ID:
B9-MAA100039-3_11_M-1-1
Description:
hepatocyte
M_Num:
11
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: B9-MAA100039-3_11_M-1-1
Sample_DIR:
SRR6575766
Sample_ID:
B9-MAA100138-3_56_F-1-1
Description:
hepatocyte
M_Num:
56
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: B9-MAA100138-3_56_F-1-1
Sample_DIR:
SRR6575979
Sample_ID:
B9-MAA100140-3_57_F-1-1
Description:
hepatocyte
M_Num:
57
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: B9-MAA100140-3_57_F-1-1
Sample_DIR:
SRR6576859
Sample_ID:
C10-MAA100039-3_11_M-1-1
Description:
hepatocyte
M_Num:
11
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: C10-MAA100039-3_11_M-1-1
Sample_DIR:
SRR6575165
Sample_ID:
C10-MAA100040-3_11_M-1-1
Description:
hepatocyte
M_Num:
11
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: C10-MAA100040-3_11_M-1-1
Sample_DIR:
SRR6576008
Sample_ID:
C10-MAA100140-3_57_F-1-1
Description:
hepatocyte
M_Num:
57
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: C10-MAA100140-3_57_F-1-1
Sample_DIR:
SRR6576861
Sample_ID:
C11-MAA100039-3_11_M-1-1
Description:
hepatocyte
M_Num:
11
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: C11-MAA100039-3_11_M-1-1
Sample_DIR:
SRR6575588
Sample_ID:
C11-MAA100042-3_9_M-1-1
Description:
hepatocyte
M_Num:
9
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: C11-MAA100042-3_9_M-1-1
Sample_DIR:
SRR6575797
Sample_ID:
C11-MAA100138-3_56_F-1-1
Description:
hepatocyte
M_Num:
56
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: C11-MAA100138-3_56_F-1-1
Sample_DIR:
SRR6576010
Sample_ID:
C11-MAA100140-3_57_F-1-1
Description:
hepatocyte
M_Num:
57
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: C11-MAA100140-3_57_F-1-1
Sample_DIR:
SRR6576863
Sample_ID:
C12-MAA100039-3_11_M-1-1
Description:
hepatocyte
M_Num:
11
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: C12-MAA100039-3_11_M-1-1
Sample_DIR:
SRR6575383
Sample_ID:
C12-MAA100041-3_9_M-1-1
Description:
hepatocyte
M_Num:
9
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: C12-MAA100041-3_9_M-1-1
Sample_DIR:
SRR6575590
Sample_ID:
C12-MAA100042-3_9_M-1-1
Description:
hepatocyte
M_Num:
9
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: C12-MAA100042-3_9_M-1-1
Sample_DIR:
SRR6576012
Sample_ID:
C12-MAA100140-3_57_F-1-1
Description:
hepatocyte
M_Num:
57
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: C12-MAA100140-3_57_F-1-1
Sample_DIR:
SRR6576199
Sample_ID:
C13-MAA000907-3_11_M-1-1
Description:
hepatocyte
M_Num:
11
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: C13-MAA000907-3_11_M-1-1
Sample_DIR:
SRR6576212
Sample_ID:
C19-MAA000907-3_11_M-1-1
Description:
hepatocyte
M_Num:
11
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: C19-MAA000907-3_11_M-1-1
Sample_DIR:
SRR6576175
Sample_ID:
C1-MAA000907-3_11_M-1-1
Description:
hepatocyte
M_Num:
11
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: C1-MAA000907-3_11_M-1-1
Sample_DIR:
SRR6576839
Sample_ID:
C1-MAA100039-3_11_M-1-1
Description:
hepatocyte
M_Num:
11
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: C1-MAA100039-3_11_M-1-1
Sample_DIR:
SRR6577042
Sample_ID:
C1-MAA100040-3_11_M-1-1
Description:
hepatocyte
M_Num:
11
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: C1-MAA100040-3_11_M-1-1
Sample_DIR:
SRR6575775
Sample_ID:
C1-MAA100138-3_56_F-1-1
Description:
hepatocyte
M_Num:
56
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: C1-MAA100138-3_56_F-1-1
Sample_DIR:
SRR6575988
Sample_ID:
C1-MAA100140-3_57_F-1-1
Description:
hepatocyte
M_Num:
57
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: C1-MAA100140-3_57_F-1-1
Sample_DIR:
SRR6576841
Sample_ID:
C2-MAA100039-3_11_M-1-1
Description:
hepatocyte
M_Num:
11
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: C2-MAA100039-3_11_M-1-1
Sample_DIR:
SRR6575777
Sample_ID:
C2-MAA100138-3_56_F-1-1
Description:
hepatocyte
M_Num:
56
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: C2-MAA100138-3_56_F-1-1
Sample_DIR:
SRR6575990
Sample_ID:
C2-MAA100140-3_57_F-1-1
Description:
hepatocyte
M_Num:
57
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: C2-MAA100140-3_57_F-1-1
Sample_DIR:
SRR6575362
Sample_ID:
C3-MAA100041-3_9_M-1-1
Description:
hepatocyte
M_Num:
9
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: C3-MAA100041-3_9_M-1-1
Sample_DIR:
SRR6575779
Sample_ID:
C3-MAA100138-3_56_F-1-1
Description:
hepatocyte
M_Num:
56
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: C3-MAA100138-3_56_F-1-1
Sample_DIR:
SRR6575993
Sample_ID:
C3-MAA100140-3_57_F-1-1
Description:
hepatocyte
M_Num:
57
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: C3-MAA100140-3_57_F-1-1
Sample_DIR:
SRR6576845
Sample_ID:
C4-MAA100039-3_11_M-1-1
Description:
hepatocyte
M_Num:
11
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: C4-MAA100039-3_11_M-1-1
Sample_DIR:
SRR6575152
Sample_ID:
C4-MAA100040-3_11_M-1-1
Description:
hepatocyte
M_Num:
11
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: C4-MAA100040-3_11_M-1-1
Sample_DIR:
SRR6575573
Sample_ID:
C4-MAA100042-3_9_M-1-1
Description:
hepatocyte
M_Num:
9
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: C4-MAA100042-3_9_M-1-1
Sample_DIR:
SRR6575782
Sample_ID:
C4-MAA100138-3_56_F-1-1
Description:
hepatocyte
M_Num:
56
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: C4-MAA100138-3_56_F-1-1
Sample_DIR:
SRR6575995
Sample_ID:
C4-MAA100140-3_57_F-1-1
Description:
hepatocyte
M_Num:
57
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: C4-MAA100140-3_57_F-1-1
Sample_DIR:
SRR6575997
Sample_ID:
C5-MAA100140-3_57_F-1-1
Description:
hepatocyte
M_Num:
57
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: C5-MAA100140-3_57_F-1-1
Sample_DIR:
SRR6576850
Sample_ID:
C6-MAA100039-3_11_M-1-1
Description:
hepatocyte
M_Num:
11
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: C6-MAA100039-3_11_M-1-1
Sample_DIR:
SRR6575156
Sample_ID:
C6-MAA100040-3_11_M-1-1
Description:
hepatocyte
M_Num:
11
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: C6-MAA100040-3_11_M-1-1
Sample_DIR:
SRR6575577
Sample_ID:
C6-MAA100042-3_9_M-1-1
Description:
hepatocyte
M_Num:
9
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: C6-MAA100042-3_9_M-1-1
Sample_DIR:
SRR6575786
Sample_ID:
C6-MAA100138-3_56_F-1-1
Description:
hepatocyte
M_Num:
56
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: C6-MAA100138-3_56_F-1-1
Sample_DIR:
SRR6575999
Sample_ID:
C6-MAA100140-3_57_F-1-1
Description:
hepatocyte
M_Num:
57
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: C6-MAA100140-3_57_F-1-1
Sample_DIR:
SRR6575158
Sample_ID:
C7-MAA100040-3_11_M-1-1
Description:
hepatocyte
M_Num:
11
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: C7-MAA100040-3_11_M-1-1
Sample_DIR:
SRR6575579
Sample_ID:
C7-MAA100042-3_9_M-1-1
Description:
hepatocyte
M_Num:
9
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: C7-MAA100042-3_9_M-1-1
Sample_DIR:
SRR6575788
Sample_ID:
C7-MAA100138-3_56_F-1-1
Description:
hepatocyte
M_Num:
56
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: C7-MAA100138-3_56_F-1-1
Sample_DIR:
SRR6576001
Sample_ID:
C7-MAA100140-3_57_F-1-1
Description:
hepatocyte
M_Num:
57
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: C7-MAA100140-3_57_F-1-1
Sample_DIR:
SRR6576854
Sample_ID:
C8-MAA100039-3_11_M-1-1
Description:
hepatocyte
M_Num:
11
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: C8-MAA100039-3_11_M-1-1
Sample_DIR:
SRR6575374
Sample_ID:
C8-MAA100041-3_9_M-1-1
Description:
hepatocyte
M_Num:
9
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: C8-MAA100041-3_9_M-1-1
Sample_DIR:
SRR6575790
Sample_ID:
C8-MAA100138-3_56_F-1-1
Description:
hepatocyte
M_Num:
56
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: C8-MAA100138-3_56_F-1-1
Sample_DIR:
SRR6576004
Sample_ID:
C8-MAA100140-3_57_F-1-1
Description:
hepatocyte
M_Num:
57
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: C8-MAA100140-3_57_F-1-1
Sample_DIR:
SRR6576193
Sample_ID:
C9-MAA000907-3_11_M-1-1
Description:
hepatocyte
M_Num:
11
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: C9-MAA000907-3_11_M-1-1
Sample_DIR:
SRR6576856
Sample_ID:
C9-MAA100039-3_11_M-1-1
Description:
hepatocyte
M_Num:
11
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: C9-MAA100039-3_11_M-1-1
Sample_DIR:
SRR6575376
Sample_ID:
C9-MAA100041-3_9_M-1-1
Description:
hepatocyte
M_Num:
9
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: C9-MAA100041-3_9_M-1-1
Sample_DIR:
SRR6575584
Sample_ID:
C9-MAA100042-3_9_M-1-1
Description:
hepatocyte
M_Num:
9
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: C9-MAA100042-3_9_M-1-1
Sample_DIR:
SRR6576006
Sample_ID:
C9-MAA100140-3_57_F-1-1
Description:
hepatocyte
M_Num:
57
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: C9-MAA100140-3_57_F-1-1
Sample_DIR:
SRR6576885
Sample_ID:
D10-MAA100039-3_11_M-1-1
Description:
hepatocyte
M_Num:
11
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: D10-MAA100039-3_11_M-1-1
Sample_DIR:
SRR6575405
Sample_ID:
D10-MAA100041-3_9_M-1-1
Description:
hepatocyte
M_Num:
9
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: D10-MAA100041-3_9_M-1-1
Sample_DIR:
SRR6575822
Sample_ID:
D10-MAA100138-3_56_F-1-1
Description:
hepatocyte
M_Num:
56
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: D10-MAA100138-3_56_F-1-1
Sample_DIR:
SRR6576034
Sample_ID:
D10-MAA100140-3_57_F-1-1
Description:
hepatocyte
M_Num:
57
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: D10-MAA100140-3_57_F-1-1
Sample_DIR:
SRR6576887
Sample_ID:
D11-MAA100039-3_11_M-1-1
Description:
hepatocyte
M_Num:
11
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: D11-MAA100039-3_11_M-1-1
Sample_DIR:
SRR6575824
Sample_ID:
D11-MAA100138-3_56_F-1-1
Description:
hepatocyte
M_Num:
56
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: D11-MAA100138-3_56_F-1-1
Sample_DIR:
SRR6576038
Sample_ID:
D11-MAA100140-3_57_F-1-1
Description:
hepatocyte
M_Num:
57
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: D11-MAA100140-3_57_F-1-1
Sample_DIR:
SRR6576889
Sample_ID:
D12-MAA100039-3_11_M-1-1
Description:
hepatocyte
M_Num:
11
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: D12-MAA100039-3_11_M-1-1
Sample_DIR:
SRR6575618
Sample_ID:
D12-MAA100042-3_9_M-1-1
Description:
hepatocyte
M_Num:
9
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: D12-MAA100042-3_9_M-1-1
Sample_DIR:
SRR6575827
Sample_ID:
D12-MAA100138-3_56_F-1-1
Description:
hepatocyte
M_Num:
56
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: D12-MAA100138-3_56_F-1-1
Sample_DIR:
SRR6576040
Sample_ID:
D12-MAA100140-3_57_F-1-1
Description:
hepatocyte
M_Num:
57
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: D12-MAA100140-3_57_F-1-1
Sample_DIR:
SRR6575370
Sample_ID:
D15-MAA000377-3_9_M-1-1
Description:
hepatocyte
M_Num:
9
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: D15-MAA000377-3_9_M-1-1
Sample_DIR:
SRR6576221
Sample_ID:
D1-MAA000907-3_11_M-1-1
Description:
hepatocyte
M_Num:
11
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: D1-MAA000907-3_11_M-1-1
Sample_DIR:
SRR6576865
Sample_ID:
D1-MAA100039-3_11_M-1-1
Description:
hepatocyte
M_Num:
11
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: D1-MAA100039-3_11_M-1-1
Sample_DIR:
SRR6575594
Sample_ID:
D1-MAA100042-3_9_M-1-1
Description:
hepatocyte
M_Num:
9
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: D1-MAA100042-3_9_M-1-1
Sample_DIR:
SRR6575801
Sample_ID:
D1-MAA100138-3_56_F-1-1
Description:
hepatocyte
M_Num:
56
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: D1-MAA100138-3_56_F-1-1
Sample_DIR:
SRR6576015
Sample_ID:
D1-MAA100140-3_57_F-1-1
Description:
hepatocyte
M_Num:
57
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: D1-MAA100140-3_57_F-1-1
Sample_DIR:
SRR6576256
Sample_ID:
D20-MAA000907-3_11_M-1-1
Description:
hepatocyte
M_Num:
11
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: D20-MAA000907-3_11_M-1-1
Sample_DIR:
SRR6576867
Sample_ID:
D2-MAA100039-3_11_M-1-1
Description:
hepatocyte
M_Num:
11
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: D2-MAA100039-3_11_M-1-1
Sample_DIR:
SRR6575174
Sample_ID:
D2-MAA100040-3_11_M-1-1
Description:
hepatocyte
M_Num:
11
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: D2-MAA100040-3_11_M-1-1
Sample_DIR:
SRR6575387
Sample_ID:
D2-MAA100041-3_9_M-1-1
Description:
hepatocyte
M_Num:
9
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: D2-MAA100041-3_9_M-1-1
Sample_DIR:
SRR6575804
Sample_ID:
D2-MAA100138-3_56_F-1-1
Description:
hepatocyte
M_Num:
56
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: D2-MAA100138-3_56_F-1-1
Sample_DIR:
SRR6576017
Sample_ID:
D2-MAA100140-3_57_F-1-1
Description:
hepatocyte
M_Num:
57
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: D2-MAA100140-3_57_F-1-1
Sample_DIR:
SRR6576870
Sample_ID:
D3-MAA100039-3_11_M-1-1
Description:
hepatocyte
M_Num:
11
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: D3-MAA100039-3_11_M-1-1
Sample_DIR:
SRR6575176
Sample_ID:
D3-MAA100040-3_11_M-1-1
Description:
hepatocyte
M_Num:
11
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: D3-MAA100040-3_11_M-1-1
Sample_DIR:
SRR6575389
Sample_ID:
D3-MAA100041-3_9_M-1-1
Description:
hepatocyte
M_Num:
9
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: D3-MAA100041-3_9_M-1-1
Sample_DIR:
SRR6575806
Sample_ID:
D3-MAA100138-3_56_F-1-1
Description:
hepatocyte
M_Num:
56
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: D3-MAA100138-3_56_F-1-1
Sample_DIR:
SRR6576872
Sample_ID:
D4-MAA100039-3_11_M-1-1
Description:
hepatocyte
M_Num:
11
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: D4-MAA100039-3_11_M-1-1
Sample_DIR:
SRR6575178
Sample_ID:
D4-MAA100040-3_11_M-1-1
Description:
hepatocyte
M_Num:
11
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: D4-MAA100040-3_11_M-1-1
Sample_DIR:
SRR6575808
Sample_ID:
D4-MAA100138-3_56_F-1-1
Description:
hepatocyte
M_Num:
56
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: D4-MAA100138-3_56_F-1-1
Sample_DIR:
SRR6576021
Sample_ID:
D4-MAA100140-3_57_F-1-1
Description:
hepatocyte
M_Num:
57
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: D4-MAA100140-3_57_F-1-1
Sample_DIR:
SRR6576874
Sample_ID:
D5-MAA100039-3_11_M-1-1
Description:
hepatocyte
M_Num:
11
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: D5-MAA100039-3_11_M-1-1
Sample_DIR:
SRR6575180
Sample_ID:
D5-MAA100040-3_11_M-1-1
Description:
hepatocyte
M_Num:
11
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: D5-MAA100040-3_11_M-1-1
Sample_DIR:
SRR6575810
Sample_ID:
D5-MAA100138-3_56_F-1-1
Description:
hepatocyte
M_Num:
56
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: D5-MAA100138-3_56_F-1-1
Sample_DIR:
SRR6576023
Sample_ID:
D5-MAA100140-3_57_F-1-1
Description:
hepatocyte
M_Num:
57
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: D5-MAA100140-3_57_F-1-1
Sample_DIR:
SRR6576876
Sample_ID:
D6-MAA100039-3_11_M-1-1
Description:
hepatocyte
M_Num:
11
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: D6-MAA100039-3_11_M-1-1
Sample_DIR:
SRR6575812
Sample_ID:
D6-MAA100138-3_56_F-1-1
Description:
hepatocyte
M_Num:
56
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: D6-MAA100138-3_56_F-1-1
Sample_DIR:
SRR6576026
Sample_ID:
D6-MAA100140-3_57_F-1-1
Description:
hepatocyte
M_Num:
57
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: D6-MAA100140-3_57_F-1-1
Sample_DIR:
SRR6576878
Sample_ID:
D7-MAA100039-3_11_M-1-1
Description:
hepatocyte
M_Num:
11
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: D7-MAA100039-3_11_M-1-1
Sample_DIR:
SRR6575607
Sample_ID:
D7-MAA100042-3_9_M-1-1
Description:
hepatocyte
M_Num:
9
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: D7-MAA100042-3_9_M-1-1
Sample_DIR:
SRR6575816
Sample_ID:
D7-MAA100138-3_56_F-1-1
Description:
hepatocyte
M_Num:
56
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: D7-MAA100138-3_56_F-1-1
Sample_DIR:
SRR6576881
Sample_ID:
D8-MAA100039-3_11_M-1-1
Description:
hepatocyte
M_Num:
11
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: D8-MAA100039-3_11_M-1-1
Sample_DIR:
SRR6576030
Sample_ID:
D8-MAA100140-3_57_F-1-1
Description:
hepatocyte
M_Num:
57
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: D8-MAA100140-3_57_F-1-1
Sample_DIR:
SRR6576237
Sample_ID:
D9-MAA000907-3_11_M-1-1
Description:
hepatocyte
M_Num:
11
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: D9-MAA000907-3_11_M-1-1
Sample_DIR:
SRR6576883
Sample_ID:
D9-MAA100039-3_11_M-1-1
Description:
hepatocyte
M_Num:
11
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: D9-MAA100039-3_11_M-1-1
Sample_DIR:
SRR6575820
Sample_ID:
D9-MAA100138-3_56_F-1-1
Description:
hepatocyte
M_Num:
56
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: D9-MAA100138-3_56_F-1-1
Sample_DIR:
SRR6576909
Sample_ID:
E10-MAA100039-3_11_M-1-1
Description:
hepatocyte
M_Num:
11
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: E10-MAA100039-3_11_M-1-1
Sample_DIR:
SRR6575849
Sample_ID:
E10-MAA100138-3_56_F-1-1
Description:
hepatocyte
M_Num:
56
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: E10-MAA100138-3_56_F-1-1
Sample_DIR:
SRR6576062
Sample_ID:
E10-MAA100140-3_57_F-1-1
Description:
hepatocyte
M_Num:
57
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: E10-MAA100140-3_57_F-1-1
Sample_DIR:
SRR6576911
Sample_ID:
E11-MAA100039-3_11_M-1-1
Description:
hepatocyte
M_Num:
11
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: E11-MAA100039-3_11_M-1-1
Sample_DIR:
SRR6575851
Sample_ID:
E11-MAA100138-3_56_F-1-1
Description:
hepatocyte
M_Num:
56
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: E11-MAA100138-3_56_F-1-1
Sample_DIR:
SRR6576064
Sample_ID:
E11-MAA100140-3_57_F-1-1
Description:
hepatocyte
M_Num:
57
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: E11-MAA100140-3_57_F-1-1
Sample_DIR:
SRR6575853
Sample_ID:
E12-MAA100138-3_56_F-1-1
Description:
hepatocyte
M_Num:
56
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: E12-MAA100138-3_56_F-1-1
Sample_DIR:
SRR6576066
Sample_ID:
E12-MAA100140-3_57_F-1-1
Description:
hepatocyte
M_Num:
57
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: E12-MAA100140-3_57_F-1-1
Sample_DIR:
SRR6576297
Sample_ID:
E18-MAA000907-3_11_M-1-1
Description:
hepatocyte
M_Num:
11
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: E18-MAA000907-3_11_M-1-1
Sample_DIR:
SRR6576892
Sample_ID:
E1-MAA100039-3_11_M-1-1
Description:
hepatocyte
M_Num:
11
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: E1-MAA100039-3_11_M-1-1
Sample_DIR:
SRR6575829
Sample_ID:
E1-MAA100138-3_56_F-1-1
Description:
hepatocyte
M_Num:
56
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: E1-MAA100138-3_56_F-1-1
Sample_DIR:
SRR6576042
Sample_ID:
E1-MAA100140-3_57_F-1-1
Description:
hepatocyte
M_Num:
57
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: E1-MAA100140-3_57_F-1-1
Sample_DIR:
SRR6576304
Sample_ID:
E21-MAA000907-3_11_M-1-1
Description:
hepatocyte
M_Num:
11
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: E21-MAA000907-3_11_M-1-1
Sample_DIR:
SRR6576894
Sample_ID:
E2-MAA100039-3_11_M-1-1
Description:
hepatocyte
M_Num:
11
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: E2-MAA100039-3_11_M-1-1
Sample_DIR:
SRR6575622
Sample_ID:
E2-MAA100042-3_9_M-1-1
Description:
hepatocyte
M_Num:
9
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: E2-MAA100042-3_9_M-1-1
Sample_DIR:
SRR6575831
Sample_ID:
E2-MAA100138-3_56_F-1-1
Description:
hepatocyte
M_Num:
56
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: E2-MAA100138-3_56_F-1-1
Sample_DIR:
SRR6576044
Sample_ID:
E2-MAA100140-3_57_F-1-1
Description:
hepatocyte
M_Num:
57
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: E2-MAA100140-3_57_F-1-1
Sample_DIR:
SRR6576896
Sample_ID:
E3-MAA100039-3_11_M-1-1
Description:
hepatocyte
M_Num:
11
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: E3-MAA100039-3_11_M-1-1
Sample_DIR:
SRR6575202
Sample_ID:
E3-MAA100040-3_11_M-1-1
Description:
hepatocyte
M_Num:
11
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: E3-MAA100040-3_11_M-1-1
Sample_DIR:
SRR6575833
Sample_ID:
E3-MAA100138-3_56_F-1-1
Description:
hepatocyte
M_Num:
56
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: E3-MAA100138-3_56_F-1-1
Sample_DIR:
SRR6576046
Sample_ID:
E3-MAA100140-3_57_F-1-1
Description:
hepatocyte
M_Num:
57
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: E3-MAA100140-3_57_F-1-1
Sample_DIR:
SRR6576898
Sample_ID:
E4-MAA100039-3_11_M-1-1
Description:
hepatocyte
M_Num:
11
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: E4-MAA100039-3_11_M-1-1
Sample_DIR:
SRR6575627
Sample_ID:
E4-MAA100042-3_9_M-1-1
Description:
hepatocyte
M_Num:
9
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: E4-MAA100042-3_9_M-1-1
Sample_DIR:
SRR6575835
Sample_ID:
E4-MAA100138-3_56_F-1-1
Description:
hepatocyte
M_Num:
56
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: E4-MAA100138-3_56_F-1-1
Sample_DIR:
SRR6576049
Sample_ID:
E4-MAA100140-3_57_F-1-1
Description:
hepatocyte
M_Num:
57
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: E4-MAA100140-3_57_F-1-1
Sample_DIR:
SRR6575207
Sample_ID:
E5-MAA100040-3_11_M-1-1
Description:
hepatocyte
M_Num:
11
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: E5-MAA100040-3_11_M-1-1
Sample_DIR:
SRR6575838
Sample_ID:
E5-MAA100138-3_56_F-1-1
Description:
hepatocyte
M_Num:
56
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: E5-MAA100138-3_56_F-1-1
Sample_DIR:
SRR6576051
Sample_ID:
E5-MAA100140-3_57_F-1-1
Description:
hepatocyte
M_Num:
57
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: E5-MAA100140-3_57_F-1-1
Sample_DIR:
SRR6575840
Sample_ID:
E6-MAA100138-3_56_F-1-1
Description:
hepatocyte
M_Num:
56
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: E6-MAA100138-3_56_F-1-1
Sample_DIR:
SRR6576053
Sample_ID:
E6-MAA100140-3_57_F-1-1
Description:
hepatocyte
M_Num:
57
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: E6-MAA100140-3_57_F-1-1
Sample_DIR:
SRR6575211
Sample_ID:
E7-MAA100040-3_11_M-1-1
Description:
hepatocyte
M_Num:
11
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: E7-MAA100040-3_11_M-1-1
Sample_DIR:
SRR6575842
Sample_ID:
E7-MAA100138-3_56_F-1-1
Description:
hepatocyte
M_Num:
56
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: E7-MAA100138-3_56_F-1-1
Sample_DIR:
SRR6576055
Sample_ID:
E7-MAA100140-3_57_F-1-1
Description:
hepatocyte
M_Num:
57
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: E7-MAA100140-3_57_F-1-1
Sample_DIR:
SRR6576907
Sample_ID:
E8-MAA100039-3_11_M-1-1
Description:
hepatocyte
M_Num:
11
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: E8-MAA100039-3_11_M-1-1
Sample_DIR:
SRR6575213
Sample_ID:
E8-MAA100040-3_11_M-1-1
Description:
hepatocyte
M_Num:
11
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: E8-MAA100040-3_11_M-1-1
Sample_DIR:
SRR6575844
Sample_ID:
E8-MAA100138-3_56_F-1-1
Description:
hepatocyte
M_Num:
56
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: E8-MAA100138-3_56_F-1-1
Sample_DIR:
SRR6576057
Sample_ID:
E8-MAA100140-3_57_F-1-1
Description:
hepatocyte
M_Num:
57
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: E8-MAA100140-3_57_F-1-1
Sample_DIR:
SRR6575429
Sample_ID:
E9-MAA100041-3_9_M-1-1
Description:
hepatocyte
M_Num:
9
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: E9-MAA100041-3_9_M-1-1
Sample_DIR:
SRR6575846
Sample_ID:
E9-MAA100138-3_56_F-1-1
Description:
hepatocyte
M_Num:
56
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: E9-MAA100138-3_56_F-1-1
Sample_DIR:
SRR6576060
Sample_ID:
E9-MAA100140-3_57_F-1-1
Description:
hepatocyte
M_Num:
57
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: E9-MAA100140-3_57_F-1-1
Sample_DIR:
SRR6575592
Sample_ID:
F10-MAA000377-3_9_M-1-1
Description:
hepatocyte
M_Num:
9
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: F10-MAA000377-3_9_M-1-1
Sample_DIR:
SRR6575875
Sample_ID:
F10-MAA100138-3_56_F-1-1
Description:
hepatocyte
M_Num:
56
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: F10-MAA100138-3_56_F-1-1
Sample_DIR:
SRR6576088
Sample_ID:
F10-MAA100140-3_57_F-1-1
Description:
hepatocyte
M_Num:
57
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: F10-MAA100140-3_57_F-1-1
Sample_DIR:
SRR6575703
Sample_ID:
F11-MAA000377-3_9_M-1-1
Description:
hepatocyte
M_Num:
9
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: F11-MAA000377-3_9_M-1-1
Sample_DIR:
SRR6575668
Sample_ID:
F11-MAA100042-3_9_M-1-1
Description:
hepatocyte
M_Num:
9
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: F11-MAA100042-3_9_M-1-1
Sample_DIR:
SRR6575877
Sample_ID:
F11-MAA100138-3_56_F-1-1
Description:
hepatocyte
M_Num:
56
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: F11-MAA100138-3_56_F-1-1
Sample_DIR:
SRR6576937
Sample_ID:
F12-MAA100039-3_11_M-1-1
Description:
hepatocyte
M_Num:
11
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: F12-MAA100039-3_11_M-1-1
Sample_DIR:
SRR6575814
Sample_ID:
F13-MAA000377-3_9_M-1-1
Description:
hepatocyte
M_Num:
9
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: F13-MAA000377-3_9_M-1-1
Sample_DIR:
SRR6575925
Sample_ID:
F15-MAA000377-3_9_M-1-1
Description:
hepatocyte
M_Num:
9
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: F15-MAA000377-3_9_M-1-1
Sample_DIR:
SRR6576147
Sample_ID:
F17-MAA000377-3_9_M-1-1
Description:
hepatocyte
M_Num:
9
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: F17-MAA000377-3_9_M-1-1
Sample_DIR:
SRR6576170
Sample_ID:
F19-MAA000377-3_9_M-1-1
Description:
hepatocyte
M_Num:
9
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: F19-MAA000377-3_9_M-1-1
Sample_DIR:
SRR6576916
Sample_ID:
F1-MAA100039-3_11_M-1-1
Description:
hepatocyte
M_Num:
11
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: F1-MAA100039-3_11_M-1-1
Sample_DIR:
SRR6575855
Sample_ID:
F1-MAA100138-3_56_F-1-1
Description:
hepatocyte
M_Num:
56
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: F1-MAA100138-3_56_F-1-1
Sample_DIR:
SRR6576068
Sample_ID:
F1-MAA100140-3_57_F-1-1
Description:
hepatocyte
M_Num:
57
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: F1-MAA100140-3_57_F-1-1
Sample_DIR:
SRR6576345
Sample_ID:
F20-MAA000907-3_11_M-1-1
Description:
hepatocyte
M_Num:
11
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: F20-MAA000907-3_11_M-1-1
Sample_DIR:
SRR6576348
Sample_ID:
F21-MAA000907-3_11_M-1-1
Description:
hepatocyte
M_Num:
11
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: F21-MAA000907-3_11_M-1-1
Sample_DIR:
SRR6576350
Sample_ID:
F22-MAA000907-3_11_M-1-1
Description:
hepatocyte
M_Num:
11
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: F22-MAA000907-3_11_M-1-1
Sample_DIR:
SRR6575857
Sample_ID:
F2-MAA100138-3_56_F-1-1
Description:
hepatocyte
M_Num:
56
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: F2-MAA100138-3_56_F-1-1
Sample_DIR:
SRR6576071
Sample_ID:
F2-MAA100140-3_57_F-1-1
Description:
hepatocyte
M_Num:
57
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: F2-MAA100140-3_57_F-1-1
Sample_DIR:
SRR6576920
Sample_ID:
F3-MAA100039-3_11_M-1-1
Description:
hepatocyte
M_Num:
11
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: F3-MAA100039-3_11_M-1-1
Sample_DIR:
SRR6575229
Sample_ID:
F3-MAA100040-3_11_M-1-1
Description:
hepatocyte
M_Num:
11
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: F3-MAA100040-3_11_M-1-1
Sample_DIR:
SRR6575860
Sample_ID:
F3-MAA100138-3_56_F-1-1
Description:
hepatocyte
M_Num:
56
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: F3-MAA100138-3_56_F-1-1
Sample_DIR:
SRR6576073
Sample_ID:
F3-MAA100140-3_57_F-1-1
Description:
hepatocyte
M_Num:
57
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: F3-MAA100140-3_57_F-1-1
Sample_DIR:
SRR6576922
Sample_ID:
F4-MAA100039-3_11_M-1-1
Description:
hepatocyte
M_Num:
11
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: F4-MAA100039-3_11_M-1-1
Sample_DIR:
SRR6575653
Sample_ID:
F4-MAA100042-3_9_M-1-1
Description:
hepatocyte
M_Num:
9
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: F4-MAA100042-3_9_M-1-1
Sample_DIR:
SRR6575862
Sample_ID:
F4-MAA100138-3_56_F-1-1
Description:
hepatocyte
M_Num:
56
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: F4-MAA100138-3_56_F-1-1
Sample_DIR:
SRR6576075
Sample_ID:
F4-MAA100140-3_57_F-1-1
Description:
hepatocyte
M_Num:
57
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: F4-MAA100140-3_57_F-1-1
Sample_DIR:
SRR6576925
Sample_ID:
F5-MAA100039-3_11_M-1-1
Description:
hepatocyte
M_Num:
11
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: F5-MAA100039-3_11_M-1-1
Sample_DIR:
SRR6575233
Sample_ID:
F5-MAA100040-3_11_M-1-1
Description:
hepatocyte
M_Num:
11
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: F5-MAA100040-3_11_M-1-1
Sample_DIR:
SRR6575864
Sample_ID:
F5-MAA100138-3_56_F-1-1
Description:
hepatocyte
M_Num:
56
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: F5-MAA100138-3_56_F-1-1
Sample_DIR:
SRR6576077
Sample_ID:
F5-MAA100140-3_57_F-1-1
Description:
hepatocyte
M_Num:
57
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: F5-MAA100140-3_57_F-1-1
Sample_DIR:
SRR6576927
Sample_ID:
F6-MAA100039-3_11_M-1-1
Description:
hepatocyte
M_Num:
11
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: F6-MAA100039-3_11_M-1-1
Sample_DIR:
SRR6575235
Sample_ID:
F6-MAA100040-3_11_M-1-1
Description:
hepatocyte
M_Num:
11
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: F6-MAA100040-3_11_M-1-1
Sample_DIR:
SRR6575657
Sample_ID:
F6-MAA100042-3_9_M-1-1
Description:
hepatocyte
M_Num:
9
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: F6-MAA100042-3_9_M-1-1
Sample_DIR:
SRR6575866
Sample_ID:
F6-MAA100138-3_56_F-1-1
Description:
hepatocyte
M_Num:
56
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: F6-MAA100138-3_56_F-1-1
Sample_DIR:
SRR6576079
Sample_ID:
F6-MAA100140-3_57_F-1-1
Description:
hepatocyte
M_Num:
57
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: F6-MAA100140-3_57_F-1-1
Sample_DIR:
SRR6576929
Sample_ID:
F7-MAA100039-3_11_M-1-1
Description:
hepatocyte
M_Num:
11
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: F7-MAA100039-3_11_M-1-1
Sample_DIR:
SRR6575238
Sample_ID:
F7-MAA100040-3_11_M-1-1
Description:
hepatocyte
M_Num:
11
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: F7-MAA100040-3_11_M-1-1
Sample_DIR:
SRR6575868
Sample_ID:
F7-MAA100138-3_56_F-1-1
Description:
hepatocyte
M_Num:
56
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: F7-MAA100138-3_56_F-1-1
Sample_DIR:
SRR6576082
Sample_ID:
F7-MAA100140-3_57_F-1-1
Description:
hepatocyte
M_Num:
57
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: F7-MAA100140-3_57_F-1-1
Sample_DIR:
SRR6576931
Sample_ID:
F8-MAA100039-3_11_M-1-1
Description:
hepatocyte
M_Num:
11
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: F8-MAA100039-3_11_M-1-1
Sample_DIR:
SRR6575240
Sample_ID:
F8-MAA100040-3_11_M-1-1
Description:
hepatocyte
M_Num:
11
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: F8-MAA100040-3_11_M-1-1
Sample_DIR:
SRR6575871
Sample_ID:
F8-MAA100138-3_56_F-1-1
Description:
hepatocyte
M_Num:
56
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: F8-MAA100138-3_56_F-1-1
Sample_DIR:
SRR6576084
Sample_ID:
F8-MAA100140-3_57_F-1-1
Description:
hepatocyte
M_Num:
57
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: F8-MAA100140-3_57_F-1-1
Sample_DIR:
SRR6576933
Sample_ID:
F9-MAA100039-3_11_M-1-1
Description:
hepatocyte
M_Num:
11
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: F9-MAA100039-3_11_M-1-1
Sample_DIR:
SRR6575242
Sample_ID:
F9-MAA100040-3_11_M-1-1
Description:
hepatocyte
M_Num:
11
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: F9-MAA100040-3_11_M-1-1
Sample_DIR:
SRR6575873
Sample_ID:
F9-MAA100138-3_56_F-1-1
Description:
hepatocyte
M_Num:
56
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: F9-MAA100138-3_56_F-1-1
Sample_DIR:
SRR6576086
Sample_ID:
F9-MAA100140-3_57_F-1-1
Description:
hepatocyte
M_Num:
57
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: F9-MAA100140-3_57_F-1-1
Sample_DIR:
SRR6575901
Sample_ID:
G10-MAA100138-3_56_F-1-1
Description:
hepatocyte
M_Num:
56
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: G10-MAA100138-3_56_F-1-1
Sample_DIR:
SRR6576115
Sample_ID:
G10-MAA100140-3_57_F-1-1
Description:
hepatocyte
M_Num:
57
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: G10-MAA100140-3_57_F-1-1
Sample_DIR:
SRR6576961
Sample_ID:
G11-MAA100039-3_11_M-1-1
Description:
hepatocyte
M_Num:
11
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: G11-MAA100039-3_11_M-1-1
Sample_DIR:
SRR6575904
Sample_ID:
G11-MAA100138-3_56_F-1-1
Description:
hepatocyte
M_Num:
56
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: G11-MAA100138-3_56_F-1-1
Sample_DIR:
SRR6576117
Sample_ID:
G11-MAA100140-3_57_F-1-1
Description:
hepatocyte
M_Num:
57
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: G11-MAA100140-3_57_F-1-1
Sample_DIR:
SRR6576963
Sample_ID:
G12-MAA100039-3_11_M-1-1
Description:
hepatocyte
M_Num:
11
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: G12-MAA100039-3_11_M-1-1
Sample_DIR:
SRR6576203
Sample_ID:
G13-MAA000377-3_9_M-1-1
Description:
hepatocyte
M_Num:
9
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: G13-MAA000377-3_9_M-1-1
Sample_DIR:
SRR6576376
Sample_ID:
G16-MAA000907-3_11_M-1-1
Description:
hepatocyte
M_Num:
11
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: G16-MAA000907-3_11_M-1-1
Sample_DIR:
SRR6576225
Sample_ID:
G18-MAA000377-3_9_M-1-1
Description:
hepatocyte
M_Num:
9
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: G18-MAA000377-3_9_M-1-1
Sample_DIR:
SRR6575671
Sample_ID:
G1-MAA100042-3_9_M-1-1
Description:
hepatocyte
M_Num:
9
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: G1-MAA100042-3_9_M-1-1
Sample_DIR:
SRR6576095
Sample_ID:
G1-MAA100140-3_57_F-1-1
Description:
hepatocyte
M_Num:
57
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: G1-MAA100140-3_57_F-1-1
Sample_DIR:
SRR6575253
Sample_ID:
G2-MAA100040-3_11_M-1-1
Description:
hepatocyte
M_Num:
11
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: G2-MAA100040-3_11_M-1-1
Sample_DIR:
SRR6575884
Sample_ID:
G2-MAA100138-3_56_F-1-1
Description:
hepatocyte
M_Num:
56
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: G2-MAA100138-3_56_F-1-1
Sample_DIR:
SRR6576099
Sample_ID:
G3-MAA100140-3_57_F-1-1
Description:
hepatocyte
M_Num:
57
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: G3-MAA100140-3_57_F-1-1
Sample_DIR:
SRR6576945
Sample_ID:
G4-MAA100039-3_11_M-1-1
Description:
hepatocyte
M_Num:
11
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: G4-MAA100039-3_11_M-1-1
Sample_DIR:
SRR6575257
Sample_ID:
G4-MAA100040-3_11_M-1-1
Description:
hepatocyte
M_Num:
11
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: G4-MAA100040-3_11_M-1-1
Sample_DIR:
SRR6575888
Sample_ID:
G4-MAA100138-3_56_F-1-1
Description:
hepatocyte
M_Num:
56
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: G4-MAA100138-3_56_F-1-1
Sample_DIR:
SRR6576101
Sample_ID:
G4-MAA100140-3_57_F-1-1
Description:
hepatocyte
M_Num:
57
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: G4-MAA100140-3_57_F-1-1
Sample_DIR:
SRR6575261
Sample_ID:
G5-MAA100040-3_11_M-1-1
Description:
hepatocyte
M_Num:
11
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: G5-MAA100040-3_11_M-1-1
Sample_DIR:
SRR6575890
Sample_ID:
G5-MAA100138-3_56_F-1-1
Description:
hepatocyte
M_Num:
56
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: G5-MAA100138-3_56_F-1-1
Sample_DIR:
SRR6576950
Sample_ID:
G6-MAA100039-3_11_M-1-1
Description:
hepatocyte
M_Num:
11
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: G6-MAA100039-3_11_M-1-1
Sample_DIR:
SRR6575263
Sample_ID:
G6-MAA100040-3_11_M-1-1
Description:
hepatocyte
M_Num:
11
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: G6-MAA100040-3_11_M-1-1
Sample_DIR:
SRR6575893
Sample_ID:
G6-MAA100138-3_56_F-1-1
Description:
hepatocyte
M_Num:
56
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: G6-MAA100138-3_56_F-1-1
Sample_DIR:
SRR6576106
Sample_ID:
G6-MAA100140-3_57_F-1-1
Description:
hepatocyte
M_Num:
57
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: G6-MAA100140-3_57_F-1-1
Sample_DIR:
SRR6576952
Sample_ID:
G7-MAA100039-3_11_M-1-1
Description:
hepatocyte
M_Num:
11
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: G7-MAA100039-3_11_M-1-1
Sample_DIR:
SRR6575684
Sample_ID:
G7-MAA100042-3_9_M-1-1
Description:
hepatocyte
M_Num:
9
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: G7-MAA100042-3_9_M-1-1
Sample_DIR:
SRR6575895
Sample_ID:
G7-MAA100138-3_56_F-1-1
Description:
hepatocyte
M_Num:
56
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: G7-MAA100138-3_56_F-1-1
Sample_DIR:
SRR6576954
Sample_ID:
G8-MAA100039-3_11_M-1-1
Description:
hepatocyte
M_Num:
11
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: G8-MAA100039-3_11_M-1-1
Sample_DIR:
SRR6575897
Sample_ID:
G8-MAA100138-3_56_F-1-1
Description:
hepatocyte
M_Num:
56
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: G8-MAA100138-3_56_F-1-1
Sample_DIR:
SRR6576110
Sample_ID:
G8-MAA100140-3_57_F-1-1
Description:
hepatocyte
M_Num:
57
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: G8-MAA100140-3_57_F-1-1
Sample_DIR:
SRR6576956
Sample_ID:
G9-MAA100039-3_11_M-1-1
Description:
hepatocyte
M_Num:
11
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: G9-MAA100039-3_11_M-1-1
Sample_DIR:
SRR6575899
Sample_ID:
G9-MAA100138-3_56_F-1-1
Description:
hepatocyte
M_Num:
56
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: G9-MAA100138-3_56_F-1-1
Sample_DIR:
SRR6575511
Sample_ID:
H10-MAA100041-3_9_M-1-1
Description:
hepatocyte
M_Num:
9
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: H10-MAA100041-3_9_M-1-1
Sample_DIR:
SRR6576408
Sample_ID:
H11-MAA000907-3_11_M-1-1
Description:
hepatocyte
M_Num:
11
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: H11-MAA000907-3_11_M-1-1
Sample_DIR:
SRR6576987
Sample_ID:
H11-MAA100039-3_11_M-1-1
Description:
hepatocyte
M_Num:
11
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: H11-MAA100039-3_11_M-1-1
Sample_DIR:
SRR6575513
Sample_ID:
H11-MAA100041-3_9_M-1-1
Description:
hepatocyte
M_Num:
9
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: H11-MAA100041-3_9_M-1-1
Sample_DIR:
SRR6575931
Sample_ID:
H11-MAA100138-3_56_F-1-1
Description:
hepatocyte
M_Num:
56
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: H11-MAA100138-3_56_F-1-1
Sample_DIR:
SRR6576143
Sample_ID:
H11-MAA100140-3_57_F-1-1
Description:
hepatocyte
M_Num:
57
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: H11-MAA100140-3_57_F-1-1
Sample_DIR:
SRR6575302
Sample_ID:
H12-MAA100040-3_11_M-1-1
Description:
hepatocyte
M_Num:
11
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: H12-MAA100040-3_11_M-1-1
Sample_DIR:
SRR6575516
Sample_ID:
H12-MAA100041-3_9_M-1-1
Description:
hepatocyte
M_Num:
9
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: H12-MAA100041-3_9_M-1-1
Sample_DIR:
SRR6575933
Sample_ID:
H12-MAA100138-3_56_F-1-1
Description:
hepatocyte
M_Num:
56
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: H12-MAA100138-3_56_F-1-1
Sample_DIR:
SRR6576145
Sample_ID:
H12-MAA100140-3_57_F-1-1
Description:
hepatocyte
M_Num:
57
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: H12-MAA100140-3_57_F-1-1
Sample_DIR:
SRR6576412
Sample_ID:
H13-MAA000907-3_11_M-1-1
Description:
hepatocyte
M_Num:
11
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: H13-MAA000907-3_11_M-1-1
Sample_DIR:
SRR6576415
Sample_ID:
H14-MAA000907-3_11_M-1-1
Description:
hepatocyte
M_Num:
11
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: H14-MAA000907-3_11_M-1-1
Sample_DIR:
SRR6576965
Sample_ID:
H1-MAA100039-3_11_M-1-1
Description:
hepatocyte
M_Num:
11
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: H1-MAA100039-3_11_M-1-1
Sample_DIR:
SRR6575491
Sample_ID:
H1-MAA100041-3_9_M-1-1
Description:
hepatocyte
M_Num:
9
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: H1-MAA100041-3_9_M-1-1
Sample_DIR:
SRR6575695
Sample_ID:
H1-MAA100042-3_9_M-1-1
Description:
hepatocyte
M_Num:
9
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: H1-MAA100042-3_9_M-1-1
Sample_DIR:
SRR6575908
Sample_ID:
H1-MAA100138-3_56_F-1-1
Description:
hepatocyte
M_Num:
56
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: H1-MAA100138-3_56_F-1-1
Sample_DIR:
SRR6576121
Sample_ID:
H1-MAA100140-3_57_F-1-1
Description:
hepatocyte
M_Num:
57
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: H1-MAA100140-3_57_F-1-1
Sample_DIR:
SRR6576314
Sample_ID:
H20-MAA000377-3_9_M-1-1
Description:
hepatocyte
M_Num:
9
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: H20-MAA000377-3_9_M-1-1
Sample_DIR:
SRR6576428
Sample_ID:
H22-MAA000907-3_11_M-1-1
Description:
hepatocyte
M_Num:
11
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: H22-MAA000907-3_11_M-1-1
Sample_DIR:
SRR6576967
Sample_ID:
H2-MAA100039-3_11_M-1-1
Description:
hepatocyte
M_Num:
11
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: H2-MAA100039-3_11_M-1-1
Sample_DIR:
SRR6575494
Sample_ID:
H2-MAA100041-3_9_M-1-1
Description:
hepatocyte
M_Num:
9
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: H2-MAA100041-3_9_M-1-1
Sample_DIR:
SRR6575697
Sample_ID:
H2-MAA100042-3_9_M-1-1
Description:
hepatocyte
M_Num:
9
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: H2-MAA100042-3_9_M-1-1
Sample_DIR:
SRR6575910
Sample_ID:
H2-MAA100138-3_56_F-1-1
Description:
hepatocyte
M_Num:
56
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: H2-MAA100138-3_56_F-1-1
Sample_DIR:
SRR6576123
Sample_ID:
H2-MAA100140-3_57_F-1-1
Description:
hepatocyte
M_Num:
57
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: H2-MAA100140-3_57_F-1-1
Sample_DIR:
SRR6576247
Sample_ID:
H3-MAA000377-3_9_M-1-1
Description:
hepatocyte
M_Num:
9
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: H3-MAA000377-3_9_M-1-1
Sample_DIR:
SRR6575496
Sample_ID:
H3-MAA100041-3_9_M-1-1
Description:
hepatocyte
M_Num:
9
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: H3-MAA100041-3_9_M-1-1
Sample_DIR:
SRR6575912
Sample_ID:
H3-MAA100138-3_56_F-1-1
Description:
hepatocyte
M_Num:
56
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: H3-MAA100138-3_56_F-1-1
Sample_DIR:
SRR6576126
Sample_ID:
H3-MAA100140-3_57_F-1-1
Description:
hepatocyte
M_Num:
57
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: H3-MAA100140-3_57_F-1-1
Sample_DIR:
SRR6576972
Sample_ID:
H4-MAA100039-3_11_M-1-1
Description:
hepatocyte
M_Num:
11
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: H4-MAA100039-3_11_M-1-1
Sample_DIR:
SRR6576128
Sample_ID:
H4-MAA100140-3_57_F-1-1
Description:
hepatocyte
M_Num:
57
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: H4-MAA100140-3_57_F-1-1
Sample_DIR:
SRR6575917
Sample_ID:
H5-MAA100138-3_56_F-1-1
Description:
hepatocyte
M_Num:
56
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: H5-MAA100138-3_56_F-1-1
Sample_DIR:
SRR6576130
Sample_ID:
H5-MAA100140-3_57_F-1-1
Description:
hepatocyte
M_Num:
57
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: H5-MAA100140-3_57_F-1-1
Sample_DIR:
SRR6576399
Sample_ID:
H6-MAA000907-3_11_M-1-1
Description:
hepatocyte
M_Num:
11
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: H6-MAA000907-3_11_M-1-1
Sample_DIR:
SRR6575919
Sample_ID:
H6-MAA100138-3_56_F-1-1
Description:
hepatocyte
M_Num:
56
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: H6-MAA100138-3_56_F-1-1
Sample_DIR:
SRR6576132
Sample_ID:
H6-MAA100140-3_57_F-1-1
Description:
hepatocyte
M_Num:
57
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: H6-MAA100140-3_57_F-1-1
Sample_DIR:
SRR6576978
Sample_ID:
H7-MAA100039-3_11_M-1-1
Description:
hepatocyte
M_Num:
11
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: H7-MAA100039-3_11_M-1-1
Sample_DIR:
SRR6576134
Sample_ID:
H7-MAA100140-3_57_F-1-1
Description:
hepatocyte
M_Num:
57
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: H7-MAA100140-3_57_F-1-1
Sample_DIR:
SRR6576981
Sample_ID:
H8-MAA100039-3_11_M-1-1
Description:
hepatocyte
M_Num:
11
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: H8-MAA100039-3_11_M-1-1
Sample_DIR:
SRR6575507
Sample_ID:
H8-MAA100041-3_9_M-1-1
Description:
hepatocyte
M_Num:
9
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: H8-MAA100041-3_9_M-1-1
Sample_DIR:
SRR6575923
Sample_ID:
H8-MAA100138-3_56_F-1-1
Description:
hepatocyte
M_Num:
56
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: H8-MAA100138-3_56_F-1-1
Sample_DIR:
SRR6575509
Sample_ID:
H9-MAA100041-3_9_M-1-1
Description:
hepatocyte
M_Num:
9
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: H9-MAA100041-3_9_M-1-1
Sample_DIR:
SRR6575927
Sample_ID:
H9-MAA100138-3_56_F-1-1
Description:
hepatocyte
M_Num:
56
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: H9-MAA100138-3_56_F-1-1
Sample_DIR:
SRR6576139
Sample_ID:
H9-MAA100140-3_57_F-1-1
Description:
hepatocyte
M_Num:
57
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: H9-MAA100140-3_57_F-1-1
Sample_DIR:
SRR6576336
Sample_ID:
I14-MAA000377-3_9_M-1-1
Description:
hepatocyte
M_Num:
9
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: I14-MAA000377-3_9_M-1-1
Sample_DIR:
SRR6576439
Sample_ID:
I8-MAA000907-3_11_M-1-1
Description:
hepatocyte
M_Num:
11
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: I8-MAA000907-3_11_M-1-1
Sample_DIR:
SRR6576441
Sample_ID:
I9-MAA000907-3_11_M-1-1
Description:
hepatocyte
M_Num:
11
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: I9-MAA000907-3_11_M-1-1
Sample_DIR:
SRR6576481
Sample_ID:
J11-MAA000907-3_11_M-1-1
Description:
hepatocyte
M_Num:
11
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: J11-MAA000907-3_11_M-1-1
Sample_DIR:
SRR6576369
Sample_ID:
J12-MAA000377-3_9_M-1-1
Description:
hepatocyte
M_Num:
9
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: J12-MAA000377-3_9_M-1-1
Sample_DIR:
SRR6576487
Sample_ID:
J14-MAA000907-3_11_M-1-1
Description:
hepatocyte
M_Num:
11
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: J14-MAA000907-3_11_M-1-1
Sample_DIR:
SRR6576403
Sample_ID:
J17-MAA000377-3_9_M-1-1
Description:
hepatocyte
M_Num:
9
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: J17-MAA000377-3_9_M-1-1
Sample_DIR:
SRR6576467
Sample_ID:
J4-MAA000907-3_11_M-1-1
Description:
hepatocyte
M_Num:
11
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: J4-MAA000907-3_11_M-1-1
Sample_DIR:
SRR6576523
Sample_ID:
K10-MAA000907-3_11_M-1-1
Description:
hepatocyte
M_Num:
11
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: K10-MAA000907-3_11_M-1-1
Sample_DIR:
SRR6576469
Sample_ID:
K11-MAA000377-3_9_M-1-1
Description:
hepatocyte
M_Num:
9
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: K11-MAA000377-3_9_M-1-1
Sample_DIR:
SRR6576526
Sample_ID:
K11-MAA000907-3_11_M-1-1
Description:
hepatocyte
M_Num:
11
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: K11-MAA000907-3_11_M-1-1
Sample_DIR:
SRR6576503
Sample_ID:
K15-MAA000377-3_9_M-1-1
Description:
hepatocyte
M_Num:
9
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: K15-MAA000377-3_9_M-1-1
Sample_DIR:
SRR6576532
Sample_ID:
K15-MAA000907-3_11_M-1-1
Description:
hepatocyte
M_Num:
11
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: K15-MAA000907-3_11_M-1-1
Sample_DIR:
SRR6576504
Sample_ID:
K1-MAA000907-3_11_M-1-1
Description:
hepatocyte
M_Num:
11
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: K1-MAA000907-3_11_M-1-1
Sample_DIR:
SRR6576543
Sample_ID:
K22-MAA000907-3_11_M-1-1
Description:
hepatocyte
M_Num:
11
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: K22-MAA000907-3_11_M-1-1
Sample_DIR:
SRR6576458
Sample_ID:
K9-MAA000377-3_9_M-1-1
Description:
hepatocyte
M_Num:
9
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: K9-MAA000377-3_9_M-1-1
Sample_DIR:
SRR6576565
Sample_ID:
L10-MAA000907-3_11_M-1-1
Description:
hepatocyte
M_Num:
11
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: L10-MAA000907-3_11_M-1-1
Sample_DIR:
SRR6576569
Sample_ID:
L11-MAA000377-3_9_M-1-1
Description:
hepatocyte
M_Num:
9
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: L11-MAA000377-3_9_M-1-1
Sample_DIR:
SRR6576603
Sample_ID:
L15-MAA000377-3_9_M-1-1
Description:
hepatocyte
M_Num:
9
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: L15-MAA000377-3_9_M-1-1
Sample_DIR:
SRR6576576
Sample_ID:
L15-MAA000907-3_11_M-1-1
Description:
hepatocyte
M_Num:
11
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: L15-MAA000907-3_11_M-1-1
Sample_DIR:
SRR6576581
Sample_ID:
L17-MAA000907-3_11_M-1-1
Description:
hepatocyte
M_Num:
11
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: L17-MAA000907-3_11_M-1-1
Sample_DIR:
SRR6576592
Sample_ID:
L22-MAA000907-3_11_M-1-1
Description:
hepatocyte
M_Num:
11
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: L22-MAA000907-3_11_M-1-1
Sample_DIR:
SRR6576547
Sample_ID:
L7-MAA000377-3_9_M-1-1
Description:
hepatocyte
M_Num:
9
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: L7-MAA000377-3_9_M-1-1
Sample_DIR:
SRR6576669
Sample_ID:
M10-MAA000377-3_9_M-1-1
Description:
hepatocyte
M_Num:
9
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: M10-MAA000377-3_9_M-1-1
Sample_DIR:
SRR6576617
Sample_ID:
M12-MAA000907-3_11_M-1-1
Description:
hepatocyte
M_Num:
11
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: M12-MAA000907-3_11_M-1-1
Sample_DIR:
SRR6576714
Sample_ID:
M16-MAA000377-3_9_M-1-1
Description:
hepatocyte
M_Num:
9
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: M16-MAA000377-3_9_M-1-1
Sample_DIR:
SRR6576594
Sample_ID:
M1-MAA000907-3_11_M-1-1
Description:
hepatocyte
M_Num:
11
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: M1-MAA000907-3_11_M-1-1
Sample_DIR:
SRR6576647
Sample_ID:
M2-MAA000377-3_9_M-1-1
Description:
hepatocyte
M_Num:
9
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: M2-MAA000377-3_9_M-1-1
Sample_DIR:
SRR6576598
Sample_ID:
M3-MAA000907-3_11_M-1-1
Description:
hepatocyte
M_Num:
11
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: M3-MAA000907-3_11_M-1-1
Sample_DIR:
SRR6576780
Sample_ID:
N11-MAA000377-3_9_M-1-1
Description:
hepatocyte
M_Num:
9
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: N11-MAA000377-3_9_M-1-1
Sample_DIR:
SRR6576667
Sample_ID:
N14-MAA000907-3_11_M-1-1
Description:
hepatocyte
M_Num:
11
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: N14-MAA000907-3_11_M-1-1
Sample_DIR:
SRR6576670
Sample_ID:
N15-MAA000907-3_11_M-1-1
Description:
hepatocyte
M_Num:
11
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: N15-MAA000907-3_11_M-1-1
Sample_DIR:
SRR6576639
Sample_ID:
N1-MAA000907-3_11_M-1-1
Description:
hepatocyte
M_Num:
11
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: N1-MAA000907-3_11_M-1-1
Sample_DIR:
SRR6576847
Sample_ID:
N20-MAA000377-3_9_M-1-1
Description:
hepatocyte
M_Num:
9
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: N20-MAA000377-3_9_M-1-1
Sample_DIR:
SRR6576758
Sample_ID:
N7-MAA000377-3_9_M-1-1
Description:
hepatocyte
M_Num:
9
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: N7-MAA000377-3_9_M-1-1
Sample_DIR:
SRR6576980
Sample_ID:
O12-MAA000377-3_9_M-1-1
Description:
hepatocyte
M_Num:
9
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: O12-MAA000377-3_9_M-1-1
Sample_DIR:
SRR6577002
Sample_ID:
O14-MAA000377-3_9_M-1-1
Description:
hepatocyte
M_Num:
9
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: O14-MAA000377-3_9_M-1-1
Sample_DIR:
SRR6576717
Sample_ID:
O14-MAA000907-3_11_M-1-1
Description:
hepatocyte
M_Num:
11
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: O14-MAA000907-3_11_M-1-1
Sample_DIR:
SRR6576732
Sample_ID:
O21-MAA000907-3_11_M-1-1
Description:
hepatocyte
M_Num:
11
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: O21-MAA000907-3_11_M-1-1
Sample_DIR:
SRR6576689
Sample_ID:
O2-MAA000907-3_11_M-1-1
Description:
hepatocyte
M_Num:
11
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: O2-MAA000907-3_11_M-1-1
Sample_DIR:
SRR6576705
Sample_ID:
O9-MAA000907-3_11_M-1-1
Description:
hepatocyte
M_Num:
11
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: O9-MAA000907-3_11_M-1-1
Sample_DIR:
SRR6576765
Sample_ID:
P14-MAA000907-3_11_M-1-1
Description:
hepatocyte
M_Num:
11
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: P14-MAA000907-3_11_M-1-1
Sample_DIR:
SRR6575282
Sample_ID:
P15-MAA000377-3_9_M-1-1
Description:
hepatocyte
M_Num:
9
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: P15-MAA000377-3_9_M-1-1
Sample_DIR:
SRR6575326
Sample_ID:
P17-MAA000377-3_9_M-1-1
Description:
hepatocyte
M_Num:
9
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: P17-MAA000377-3_9_M-1-1
Sample_DIR:
SRR6576776
Sample_ID:
P19-MAA000907-3_11_M-1-1
Description:
hepatocyte
M_Num:
11
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: P19-MAA000907-3_11_M-1-1
Sample_DIR:
SRR6576781
Sample_ID:
P21-MAA000907-3_11_M-1-1
Description:
hepatocyte
M_Num:
11
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: P21-MAA000907-3_11_M-1-1
Sample_DIR:
SRR6575415
Sample_ID:
P22-MAA000377-3_9_M-1-1
Description:
hepatocyte
M_Num:
9
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: P22-MAA000377-3_9_M-1-1
Sample_DIR:
SRR6576783
Sample_ID:
P22-MAA000907-3_11_M-1-1
Description:
hepatocyte
M_Num:
11
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: P22-MAA000907-3_11_M-1-1
Sample_DIR:
SRR6576750
Sample_ID:
P7-MAA000907-3_11_M-1-1
Description:
hepatocyte
M_Num:
11
Copy Condition_1 sample count files to Condition_1 folder
calculate mapped reads: P7-MAA000907-3_11_M-1-1
M_Num_Cond1_List:
11
------------------------------------------
------------------------------------------
Sample_DIR:
SRR6575593
Sample_ID:
A8-MAA000907-3_11_M-1-1
Description:
natural_killer_cell
M_Num:
11
Copy Condition_2 sample count files to Condition_2 folder
calculate mapped reads: A8-MAA000907-3_11_M-1-1
Sample_DIR:
SRR6576171
Sample_ID:
B21-MAA000907-3_11_M-1-1
Description:
natural_killer_cell
M_Num:
11
Copy Condition_2 sample count files to Condition_2 folder
calculate mapped reads: B21-MAA000907-3_11_M-1-1
Sample_DIR:
SRR6576103
Sample_ID:
B9-MAA000907-3_11_M-1-1
Description:
natural_killer_cell
M_Num:
11
Copy Condition_2 sample count files to Condition_2 folder
calculate mapped reads: B9-MAA000907-3_11_M-1-1
Sample_DIR:
SRR6576217
Sample_ID:
C21-MAA000907-3_11_M-1-1
Description:
natural_killer_cell
M_Num:
11
Copy Condition_2 sample count files to Condition_2 folder
calculate mapped reads: C21-MAA000907-3_11_M-1-1
Sample_DIR:
SRR6576184
Sample_ID:
C5-MAA000907-3_11_M-1-1
Description:
natural_killer_cell
M_Num:
11
Copy Condition_2 sample count files to Condition_2 folder
calculate mapped reads: C5-MAA000907-3_11_M-1-1
Sample_DIR:
SRR6576186
Sample_ID:
C6-MAA000907-3_11_M-1-1
Description:
natural_killer_cell
M_Num:
11
Copy Condition_2 sample count files to Condition_2 folder
calculate mapped reads: C6-MAA000907-3_11_M-1-1
Sample_DIR:
SRR6576241
Sample_ID:
D11-MAA000907-3_11_M-1-1
Description:
natural_killer_cell
M_Num:
11
Copy Condition_2 sample count files to Condition_2 folder
calculate mapped reads: D11-MAA000907-3_11_M-1-1
Sample_DIR:
SRR6576261
Sample_ID:
D22-MAA000907-3_11_M-1-1
Description:
natural_killer_cell
M_Num:
11
Copy Condition_2 sample count files to Condition_2 folder
calculate mapped reads: D22-MAA000907-3_11_M-1-1
Sample_DIR:
SRR6576290
Sample_ID:
E15-MAA000907-3_11_M-1-1
Description:
natural_killer_cell
M_Num:
11
Copy Condition_2 sample count files to Condition_2 folder
calculate mapped reads: E15-MAA000907-3_11_M-1-1
Sample_DIR:
SRR6576299
Sample_ID:
E19-MAA000907-3_11_M-1-1
Description:
natural_killer_cell
M_Num:
11
Copy Condition_2 sample count files to Condition_2 folder
calculate mapped reads: E19-MAA000907-3_11_M-1-1
Sample_DIR:
SRR6576273
Sample_ID:
E5-MAA000907-3_11_M-1-1
Description:
natural_killer_cell
M_Num:
11
Copy Condition_2 sample count files to Condition_2 folder
calculate mapped reads: E5-MAA000907-3_11_M-1-1
Sample_DIR:
SRR6576334
Sample_ID:
F15-MAA000907-3_11_M-1-1
Description:
natural_killer_cell
M_Num:
11
Copy Condition_2 sample count files to Condition_2 folder
calculate mapped reads: F15-MAA000907-3_11_M-1-1
Sample_DIR:
SRR6576337
Sample_ID:
F16-MAA000907-3_11_M-1-1
Description:
natural_killer_cell
M_Num:
11
Copy Condition_2 sample count files to Condition_2 folder
calculate mapped reads: F16-MAA000907-3_11_M-1-1
Sample_DIR:
SRR6576339
Sample_ID:
F17-MAA000907-3_11_M-1-1
Description:
natural_killer_cell
M_Num:
11
Copy Condition_2 sample count files to Condition_2 folder
calculate mapped reads: F17-MAA000907-3_11_M-1-1
Sample_DIR:
SRR6576159
Sample_ID:
F18-MAA000377-3_9_M-1-1
Description:
natural_killer_cell
M_Num:
9
Copy Condition_2 sample count files to Condition_2 folder
calculate mapped reads: F18-MAA000377-3_9_M-1-1
Sample_DIR:
SRR6576308
Sample_ID:
F1-MAA000907-3_11_M-1-1
Description:
natural_killer_cell
M_Num:
11
Copy Condition_2 sample count files to Condition_2 folder
calculate mapped reads: F1-MAA000907-3_11_M-1-1
Sample_DIR:
SRR6576315
Sample_ID:
F4-MAA000907-3_11_M-1-1
Description:
natural_killer_cell
M_Num:
11
Copy Condition_2 sample count files to Condition_2 folder
calculate mapped reads: F4-MAA000907-3_11_M-1-1
Sample_DIR:
SRR6576372
Sample_ID:
G11-MAA000907-3_11_M-1-1
Description:
natural_killer_cell
M_Num:
11
Copy Condition_2 sample count files to Condition_2 folder
calculate mapped reads: G11-MAA000907-3_11_M-1-1
Sample_DIR:
SRR6576236
Sample_ID:
G19-MAA000377-3_9_M-1-1
Description:
natural_killer_cell
M_Num:
9
Copy Condition_2 sample count files to Condition_2 folder
calculate mapped reads: G19-MAA000377-3_9_M-1-1
Sample_DIR:
SRR6576382
Sample_ID:
G19-MAA000907-3_11_M-1-1
Description:
natural_killer_cell
M_Num:
11
Copy Condition_2 sample count files to Condition_2 folder
calculate mapped reads: G19-MAA000907-3_11_M-1-1
Sample_DIR:
SRR6576384
Sample_ID:
G20-MAA000907-3_11_M-1-1
Description:
natural_killer_cell
M_Num:
11
Copy Condition_2 sample count files to Condition_2 folder
calculate mapped reads: G20-MAA000907-3_11_M-1-1
Sample_DIR:
SRR6576388
Sample_ID:
G22-MAA000907-3_11_M-1-1
Description:
natural_killer_cell
M_Num:
11
Copy Condition_2 sample count files to Condition_2 folder
calculate mapped reads: G22-MAA000907-3_11_M-1-1
Sample_DIR:
SRR6576258
Sample_ID:
H12-MAA000377-3_9_M-1-1
Description:
natural_killer_cell
M_Num:
9
Copy Condition_2 sample count files to Condition_2 folder
calculate mapped reads: H12-MAA000377-3_9_M-1-1
Sample_DIR:
SRR6576401
Sample_ID:
H7-MAA000907-3_11_M-1-1
Description:
natural_killer_cell
M_Num:
11
Copy Condition_2 sample count files to Condition_2 folder
calculate mapped reads: H7-MAA000907-3_11_M-1-1
Sample_DIR:
SRR6576358
Sample_ID:
I22-MAA000377-3_9_M-1-1
Description:
natural_killer_cell
M_Num:
9
Copy Condition_2 sample count files to Condition_2 folder
calculate mapped reads: I22-MAA000377-3_9_M-1-1
Sample_DIR:
SRR6576425
Sample_ID:
J20-MAA000377-3_9_M-1-1
Description:
natural_killer_cell
M_Num:
9
Copy Condition_2 sample count files to Condition_2 folder
calculate mapped reads: J20-MAA000377-3_9_M-1-1
Sample_DIR:
SRR6576612
Sample_ID:
M10-MAA000907-3_11_M-1-1
Description:
natural_killer_cell
M_Num:
11
Copy Condition_2 sample count files to Condition_2 folder
calculate mapped reads: M10-MAA000907-3_11_M-1-1
Sample_DIR:
SRR6576691
Sample_ID:
M15-MAA000377-3_9_M-1-1
Description:
natural_killer_cell
M_Num:
9
Copy Condition_2 sample count files to Condition_2 folder
calculate mapped reads: M15-MAA000377-3_9_M-1-1
Sample_DIR:
SRR6576628
Sample_ID:
M17-MAA000907-3_11_M-1-1
Description:
natural_killer_cell
M_Num:
11
Copy Condition_2 sample count files to Condition_2 folder
calculate mapped reads: M17-MAA000907-3_11_M-1-1
Sample_DIR:
SRR6576630
Sample_ID:
M18-MAA000907-3_11_M-1-1
Description:
natural_killer_cell
M_Num:
11
Copy Condition_2 sample count files to Condition_2 folder
calculate mapped reads: M18-MAA000907-3_11_M-1-1
Sample_DIR:
SRR6576608
Sample_ID:
M8-MAA000907-3_11_M-1-1
Description:
natural_killer_cell
M_Num:
11
Copy Condition_2 sample count files to Condition_2 folder
calculate mapped reads: M8-MAA000907-3_11_M-1-1
Sample_DIR:
SRR6576672
Sample_ID:
N16-MAA000907-3_11_M-1-1
Description:
natural_killer_cell
M_Num:
11
Copy Condition_2 sample count files to Condition_2 folder
calculate mapped reads: N16-MAA000907-3_11_M-1-1
Sample_DIR:
SRR6576650
Sample_ID:
N6-MAA000907-3_11_M-1-1
Description:
natural_killer_cell
M_Num:
11
Copy Condition_2 sample count files to Condition_2 folder
calculate mapped reads: N6-MAA000907-3_11_M-1-1
Sample_DIR:
SRR6576656
Sample_ID:
N9-MAA000907-3_11_M-1-1
Description:
natural_killer_cell
M_Num:
11
Copy Condition_2 sample count files to Condition_2 folder
calculate mapped reads: N9-MAA000907-3_11_M-1-1
Sample_DIR:
SRR6575193
Sample_ID:
O21-MAA000377-3_9_M-1-1
Description:
natural_killer_cell
M_Num:
9
Copy Condition_2 sample count files to Condition_2 folder
calculate mapped reads: O21-MAA000377-3_9_M-1-1
M_Num_Cond2_List:
9
------------------------------------------
==========================================================

Number of replicates in each condition:

NUM_REP_CONDITION1: 0
NUM_REP_CONDITION1: 0
==========================================================

Renaming input count files

Counting program: Not HTSeq
No lines removed.
Counting program: Not HTSeq
No lines removed.
number of mapped reads
==========================================================

List files in Input

-rw-r--r-- 1 kkarri waxmanlab 301424 Oct 18 23:12 /scratch/9022420.1.linga/Input/Intron_Only_Regions_Lengths.txt

/scratch/9022420.1.linga/Input/Hepatocyte:
total 1636
drwxr-xr-x 2 kkarri waxmanlab 36864 Oct 18 23:12 .
drwxr-xr-x 4 kkarri waxmanlab  4096 Oct 18 23:12 ..
-rw-r--r-- 1 kkarri waxmanlab     6 Oct 18 23:11 A1-MAA000907-3_11_M-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab     8 Oct 18 23:11 A1-MAA100039-3_11_M-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab     8 Oct 18 23:11 A1-MAA100138-3_56_F-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab     8 Oct 18 23:11 A1-MAA100140-3_57_F-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab     7 Oct 18 23:11 A10-MAA100041-3_9_M-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab     7 Oct 18 23:11 A10-MAA100138-3_56_F-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab     7 Oct 18 23:11 A11-MAA100041-3_9_M-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab     8 Oct 18 23:11 A11-MAA100138-3_56_F-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab     7 Oct 18 23:11 A11-MAA100140-3_57_F-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab     8 Oct 18 23:11 A12-MAA100042-3_9_M-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab     8 Oct 18 23:11 A12-MAA100140-3_57_F-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab     7 Oct 18 23:11 A14-MAA000907-3_11_M-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab     7 Oct 18 23:11 A18-MAA000907-3_11_M-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab     8 Oct 18 23:11 A2-MAA100039-3_11_M-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab     8 Oct 18 23:11 A2-MAA100040-3_11_M-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab     8 Oct 18 23:11 A2-MAA100138-3_56_F-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab     8 Oct 18 23:11 A2-MAA100140-3_57_F-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab     7 Oct 18 23:11 A3-MAA000907-3_11_M-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab     8 Oct 18 23:11 A3-MAA100039-3_11_M-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab     8 Oct 18 23:11 A3-MAA100040-3_11_M-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab     8 Oct 18 23:11 A3-MAA100138-3_56_F-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab     8 Oct 18 23:11 A3-MAA100140-3_57_F-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab     8 Oct 18 23:11 A4-MAA100039-3_11_M-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab     7 Oct 18 23:11 A4-MAA100041-3_9_M-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab     8 Oct 18 23:11 A4-MAA100138-3_56_F-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab     8 Oct 18 23:11 A4-MAA100140-3_57_F-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab     7 Oct 18 23:11 A5-MAA100138-3_56_F-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab     8 Oct 18 23:11 A5-MAA100140-3_57_F-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab     8 Oct 18 23:11 A6-MAA100039-3_11_M-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab     7 Oct 18 23:11 A6-MAA100040-3_11_M-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab     7 Oct 18 23:11 A6-MAA100042-3_9_M-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab     8 Oct 18 23:11 A6-MAA100138-3_56_F-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab     8 Oct 18 23:11 A6-MAA100140-3_57_F-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab     8 Oct 18 23:11 A7-MAA100040-3_11_M-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab     8 Oct 18 23:11 A7-MAA100042-3_9_M-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab     8 Oct 18 23:11 A7-MAA100138-3_56_F-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab     8 Oct 18 23:11 A7-MAA100140-3_57_F-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab     8 Oct 18 23:11 A8-MAA100138-3_56_F-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab     8 Oct 18 23:11 A8-MAA100140-3_57_F-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab     7 Oct 18 23:11 A9-MAA100040-3_11_M-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab     8 Oct 18 23:11 A9-MAA100042-3_9_M-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab     7 Oct 18 23:11 A9-MAA100138-3_56_F-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab     7 Oct 18 23:11 A9-MAA100140-3_57_F-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab     8 Oct 18 23:11 B1-MAA100039-3_11_M-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab     8 Oct 18 23:11 B1-MAA100040-3_11_M-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab     8 Oct 18 23:11 B1-MAA100138-3_56_F-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab     8 Oct 18 23:11 B1-MAA100140-3_57_F-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab     7 Oct 18 23:11 B10-MAA000907-3_11_M-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab     8 Oct 18 23:11 B10-MAA100039-3_11_M-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab     7 Oct 18 23:11 B10-MAA100138-3_56_F-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab     8 Oct 18 23:11 B11-MAA000907-3_11_M-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab     8 Oct 18 23:11 B11-MAA100039-3_11_M-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab     8 Oct 18 23:11 B11-MAA100042-3_9_M-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab     7 Oct 18 23:11 B11-MAA100138-3_56_F-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab     8 Oct 18 23:11 B12-MAA100039-3_11_M-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab     7 Oct 18 23:11 B12-MAA100041-3_9_M-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab     8 Oct 18 23:11 B12-MAA100042-3_9_M-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab     7 Oct 18 23:11 B12-MAA100140-3_57_F-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab     8 Oct 18 23:11 B14-MAA000377-3_9_M-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab     7 Oct 18 23:11 B16-MAA000907-3_11_M-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab     8 Oct 18 23:11 B2-MAA100040-3_11_M-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab     8 Oct 18 23:11 B2-MAA100138-3_56_F-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab     8 Oct 18 23:11 B2-MAA100140-3_57_F-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab     7 Oct 18 23:11 B22-MAA000907-3_11_M-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab     8 Oct 18 23:11 B3-MAA100039-3_11_M-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab     8 Oct 18 23:11 B3-MAA100040-3_11_M-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab     8 Oct 18 23:11 B3-MAA100041-3_9_M-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab     8 Oct 18 23:11 B3-MAA100138-3_56_F-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab     7 Oct 18 23:11 B3-MAA100140-3_57_F-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab     8 Oct 18 23:11 B4-MAA100039-3_11_M-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab     8 Oct 18 23:11 B4-MAA100040-3_11_M-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab     7 Oct 18 23:11 B4-MAA100042-3_9_M-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab     8 Oct 18 23:11 B4-MAA100138-3_56_F-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab     8 Oct 18 23:11 B4-MAA100140-3_57_F-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab     8 Oct 18 23:11 B5-MAA100039-3_11_M-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab     7 Oct 18 23:11 B5-MAA100138-3_56_F-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab     8 Oct 18 23:11 B5-MAA100140-3_57_F-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab     8 Oct 18 23:11 B6-MAA100039-3_11_M-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab     7 Oct 18 23:11 B6-MAA100040-3_11_M-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab     8 Oct 18 23:11 B6-MAA100138-3_56_F-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab     7 Oct 18 23:11 B6-MAA100140-3_57_F-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab     7 Oct 18 23:11 B7-MAA000377-3_9_M-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab     7 Oct 18 23:11 B7-MAA000907-3_11_M-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab     8 Oct 18 23:11 B7-MAA100039-3_11_M-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab     8 Oct 18 23:11 B7-MAA100040-3_11_M-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab     8 Oct 18 23:11 B7-MAA100041-3_9_M-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab     8 Oct 18 23:11 B7-MAA100138-3_56_F-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab     8 Oct 18 23:11 B8-MAA000377-3_9_M-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab     7 Oct 18 23:11 B8-MAA100040-3_11_M-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab     8 Oct 18 23:11 B8-MAA100138-3_56_F-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab     7 Oct 18 23:11 B9-MAA100039-3_11_M-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab     8 Oct 18 23:11 B9-MAA100138-3_56_F-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab     7 Oct 18 23:11 B9-MAA100140-3_57_F-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab     7 Oct 18 23:11 C1-MAA000907-3_11_M-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab     8 Oct 18 23:11 C1-MAA100039-3_11_M-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab     7 Oct 18 23:11 C1-MAA100040-3_11_M-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab     8 Oct 18 23:11 C1-MAA100138-3_56_F-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab     8 Oct 18 23:11 C1-MAA100140-3_57_F-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab     8 Oct 18 23:11 C10-MAA100039-3_11_M-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab     7 Oct 18 23:11 C10-MAA100040-3_11_M-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab     8 Oct 18 23:11 C10-MAA100140-3_57_F-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab     8 Oct 18 23:11 C11-MAA100039-3_11_M-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab     8 Oct 18 23:11 C11-MAA100042-3_9_M-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab     8 Oct 18 23:11 C11-MAA100138-3_56_F-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab     8 Oct 18 23:11 C11-MAA100140-3_57_F-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab     8 Oct 18 23:11 C12-MAA100039-3_11_M-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab     7 Oct 18 23:11 C12-MAA100041-3_9_M-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab     8 Oct 18 23:11 C12-MAA100042-3_9_M-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab     8 Oct 18 23:11 C12-MAA100140-3_57_F-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab     7 Oct 18 23:11 C13-MAA000907-3_11_M-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab     7 Oct 18 23:11 C19-MAA000907-3_11_M-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab     7 Oct 18 23:11 C2-MAA100039-3_11_M-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab     8 Oct 18 23:11 C2-MAA100138-3_56_F-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab     8 Oct 18 23:11 C2-MAA100140-3_57_F-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab     7 Oct 18 23:11 C3-MAA100041-3_9_M-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab     8 Oct 18 23:11 C3-MAA100138-3_56_F-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab     8 Oct 18 23:11 C3-MAA100140-3_57_F-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab     7 Oct 18 23:11 C4-MAA100039-3_11_M-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab     8 Oct 18 23:11 C4-MAA100040-3_11_M-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab     8 Oct 18 23:11 C4-MAA100042-3_9_M-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab     7 Oct 18 23:11 C4-MAA100138-3_56_F-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab     8 Oct 18 23:11 C4-MAA100140-3_57_F-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab     8 Oct 18 23:11 C5-MAA100140-3_57_F-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab     8 Oct 18 23:11 C6-MAA100039-3_11_M-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab     8 Oct 18 23:11 C6-MAA100040-3_11_M-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab     8 Oct 18 23:11 C6-MAA100042-3_9_M-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab     8 Oct 18 23:11 C6-MAA100138-3_56_F-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab     8 Oct 18 23:11 C6-MAA100140-3_57_F-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab     8 Oct 18 23:11 C7-MAA100040-3_11_M-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab     8 Oct 18 23:11 C7-MAA100042-3_9_M-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab     8 Oct 18 23:11 C7-MAA100138-3_56_F-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab     8 Oct 18 23:11 C7-MAA100140-3_57_F-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab     7 Oct 18 23:11 C8-MAA100039-3_11_M-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab     7 Oct 18 23:11 C8-MAA100041-3_9_M-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab     8 Oct 18 23:11 C8-MAA100138-3_56_F-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab     8 Oct 18 23:11 C8-MAA100140-3_57_F-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab     7 Oct 18 23:11 C9-MAA000907-3_11_M-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab     8 Oct 18 23:11 C9-MAA100039-3_11_M-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab     8 Oct 18 23:11 C9-MAA100041-3_9_M-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab     7 Oct 18 23:11 C9-MAA100042-3_9_M-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab     8 Oct 18 23:11 C9-MAA100140-3_57_F-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab     7 Oct 18 23:11 D1-MAA000907-3_11_M-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab     8 Oct 18 23:11 D1-MAA100039-3_11_M-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab     7 Oct 18 23:11 D1-MAA100042-3_9_M-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab     8 Oct 18 23:11 D1-MAA100138-3_56_F-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab     8 Oct 18 23:11 D1-MAA100140-3_57_F-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab     8 Oct 18 23:11 D10-MAA100039-3_11_M-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab     7 Oct 18 23:11 D10-MAA100041-3_9_M-1-1_num_mapped_reads.txt
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-rw-r--r-- 1 kkarri waxmanlab     7 Oct 18 23:12 H11-MAA000907-3_11_M-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab     7 Oct 18 23:12 H11-MAA100039-3_11_M-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab     8 Oct 18 23:12 H11-MAA100041-3_9_M-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab     8 Oct 18 23:12 H11-MAA100138-3_56_F-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab     8 Oct 18 23:12 H11-MAA100140-3_57_F-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab     8 Oct 18 23:12 H12-MAA100040-3_11_M-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab     8 Oct 18 23:12 H12-MAA100041-3_9_M-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab     8 Oct 18 23:12 H12-MAA100138-3_56_F-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab     8 Oct 18 23:12 H12-MAA100140-3_57_F-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab     7 Oct 18 23:12 H13-MAA000907-3_11_M-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab     7 Oct 18 23:12 H14-MAA000907-3_11_M-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab     8 Oct 18 23:12 H2-MAA100039-3_11_M-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab     7 Oct 18 23:12 H2-MAA100041-3_9_M-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab     8 Oct 18 23:12 H2-MAA100042-3_9_M-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab     8 Oct 18 23:12 H2-MAA100138-3_56_F-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab     8 Oct 18 23:12 H2-MAA100140-3_57_F-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab     7 Oct 18 23:12 H20-MAA000377-3_9_M-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab     7 Oct 18 23:12 H22-MAA000907-3_11_M-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab     7 Oct 18 23:12 H3-MAA000377-3_9_M-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab     7 Oct 18 23:12 H3-MAA100041-3_9_M-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab     8 Oct 18 23:12 H3-MAA100138-3_56_F-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab     8 Oct 18 23:12 H3-MAA100140-3_57_F-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab     8 Oct 18 23:12 H4-MAA100039-3_11_M-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab     8 Oct 18 23:12 H4-MAA100140-3_57_F-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab     8 Oct 18 23:12 H5-MAA100138-3_56_F-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab     8 Oct 18 23:12 H5-MAA100140-3_57_F-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab     7 Oct 18 23:12 H6-MAA000907-3_11_M-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab     8 Oct 18 23:12 H6-MAA100138-3_56_F-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab     8 Oct 18 23:12 H6-MAA100140-3_57_F-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab     8 Oct 18 23:12 H7-MAA100039-3_11_M-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab     7 Oct 18 23:12 H7-MAA100140-3_57_F-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab     7 Oct 18 23:12 H8-MAA100039-3_11_M-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab     7 Oct 18 23:12 H8-MAA100041-3_9_M-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab     8 Oct 18 23:12 H8-MAA100138-3_56_F-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab     8 Oct 18 23:12 H9-MAA100041-3_9_M-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab     8 Oct 18 23:12 H9-MAA100138-3_56_F-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab     8 Oct 18 23:12 H9-MAA100140-3_57_F-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab     8 Oct 18 23:12 I14-MAA000377-3_9_M-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab     7 Oct 18 23:12 I8-MAA000907-3_11_M-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab     7 Oct 18 23:12 I9-MAA000907-3_11_M-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab     7 Oct 18 23:12 J11-MAA000907-3_11_M-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab     7 Oct 18 23:12 J12-MAA000377-3_9_M-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab     7 Oct 18 23:12 J14-MAA000907-3_11_M-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab     7 Oct 18 23:12 J17-MAA000377-3_9_M-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab     7 Oct 18 23:12 J4-MAA000907-3_11_M-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab     7 Oct 18 23:12 K1-MAA000907-3_11_M-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab     7 Oct 18 23:12 K10-MAA000907-3_11_M-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab     7 Oct 18 23:12 K11-MAA000377-3_9_M-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab     7 Oct 18 23:12 K11-MAA000907-3_11_M-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab     7 Oct 18 23:12 K15-MAA000377-3_9_M-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab     7 Oct 18 23:12 K15-MAA000907-3_11_M-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab     7 Oct 18 23:12 K22-MAA000907-3_11_M-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab     7 Oct 18 23:12 K9-MAA000377-3_9_M-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab     7 Oct 18 23:12 L10-MAA000907-3_11_M-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab     7 Oct 18 23:12 L11-MAA000377-3_9_M-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab     8 Oct 18 23:12 L15-MAA000377-3_9_M-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab     7 Oct 18 23:12 L15-MAA000907-3_11_M-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab     7 Oct 18 23:12 L17-MAA000907-3_11_M-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab     7 Oct 18 23:12 L22-MAA000907-3_11_M-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab     7 Oct 18 23:12 L7-MAA000377-3_9_M-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab     7 Oct 18 23:12 M1-MAA000907-3_11_M-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab     7 Oct 18 23:12 M10-MAA000377-3_9_M-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab     7 Oct 18 23:12 M12-MAA000907-3_11_M-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab     7 Oct 18 23:12 M16-MAA000377-3_9_M-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab     7 Oct 18 23:12 M2-MAA000377-3_9_M-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab     7 Oct 18 23:12 M3-MAA000907-3_11_M-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab     7 Oct 18 23:12 N1-MAA000907-3_11_M-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab     7 Oct 18 23:12 N11-MAA000377-3_9_M-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab     7 Oct 18 23:12 N14-MAA000907-3_11_M-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab     6 Oct 18 23:12 N15-MAA000907-3_11_M-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab     7 Oct 18 23:12 N20-MAA000377-3_9_M-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab     7 Oct 18 23:12 N7-MAA000377-3_9_M-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab     6 Oct 18 23:12 O12-MAA000377-3_9_M-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab     7 Oct 18 23:12 O14-MAA000377-3_9_M-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab     7 Oct 18 23:12 O14-MAA000907-3_11_M-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab     7 Oct 18 23:12 O2-MAA000907-3_11_M-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab     7 Oct 18 23:12 O21-MAA000907-3_11_M-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab     7 Oct 18 23:12 O9-MAA000907-3_11_M-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab     7 Oct 18 23:12 P14-MAA000907-3_11_M-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab     6 Oct 18 23:12 P15-MAA000377-3_9_M-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab     7 Oct 18 23:12 P17-MAA000377-3_9_M-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab     7 Oct 18 23:12 P19-MAA000907-3_11_M-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab     7 Oct 18 23:12 P21-MAA000907-3_11_M-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab     7 Oct 18 23:12 P22-MAA000377-3_9_M-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab     7 Oct 18 23:12 P22-MAA000907-3_11_M-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab     7 Oct 18 23:12 P7-MAA000907-3_11_M-1-1_num_mapped_reads.txt

/scratch/9022420.1.linga/Input/NKCell:
total 148
drwxr-xr-x 2 kkarri waxmanlab 4096 Oct 18 23:12 .
drwxr-xr-x 4 kkarri waxmanlab 4096 Oct 18 23:12 ..
-rw-r--r-- 1 kkarri waxmanlab    7 Oct 18 23:12 A8-MAA000907-3_11_M-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab    7 Oct 18 23:12 B21-MAA000907-3_11_M-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab    7 Oct 18 23:12 B9-MAA000907-3_11_M-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab    8 Oct 18 23:12 C21-MAA000907-3_11_M-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab    7 Oct 18 23:12 C5-MAA000907-3_11_M-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab    7 Oct 18 23:12 C6-MAA000907-3_11_M-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab    7 Oct 18 23:12 D11-MAA000907-3_11_M-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab    8 Oct 18 23:12 D22-MAA000907-3_11_M-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab    7 Oct 18 23:12 E15-MAA000907-3_11_M-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab    7 Oct 18 23:12 E19-MAA000907-3_11_M-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab    7 Oct 18 23:12 E5-MAA000907-3_11_M-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab    7 Oct 18 23:12 F1-MAA000907-3_11_M-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab    7 Oct 18 23:12 F15-MAA000907-3_11_M-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab    7 Oct 18 23:12 F16-MAA000907-3_11_M-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab    7 Oct 18 23:12 F17-MAA000907-3_11_M-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab    7 Oct 18 23:12 F18-MAA000377-3_9_M-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab    7 Oct 18 23:12 F4-MAA000907-3_11_M-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab    7 Oct 18 23:12 G11-MAA000907-3_11_M-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab    7 Oct 18 23:12 G19-MAA000377-3_9_M-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab    7 Oct 18 23:12 G19-MAA000907-3_11_M-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab    7 Oct 18 23:12 G20-MAA000907-3_11_M-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab    7 Oct 18 23:12 G22-MAA000907-3_11_M-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab    7 Oct 18 23:12 H12-MAA000377-3_9_M-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab    7 Oct 18 23:12 H7-MAA000907-3_11_M-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab    7 Oct 18 23:12 I22-MAA000377-3_9_M-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab    7 Oct 18 23:12 J20-MAA000377-3_9_M-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab    7 Oct 18 23:12 M10-MAA000907-3_11_M-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab    7 Oct 18 23:12 M15-MAA000377-3_9_M-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab    7 Oct 18 23:12 M17-MAA000907-3_11_M-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab    7 Oct 18 23:12 M18-MAA000907-3_11_M-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab    7 Oct 18 23:12 M8-MAA000907-3_11_M-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab    7 Oct 18 23:12 N16-MAA000907-3_11_M-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab    7 Oct 18 23:12 N6-MAA000907-3_11_M-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab    7 Oct 18 23:12 N9-MAA000907-3_11_M-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab    7 Oct 18 23:12 O21-MAA000377-3_9_M-1-1_num_mapped_reads.txt
==========================================================

Starting to run my commands

Printing Rscript command:
Rscript differentialAnalysis.R Hepatocyte NKCell 0 0 RefSeq_GeneBody.gtf /scratch/9022420.1.linga/Input DiffExp_v2_Intronic_Only Intron_Only_Regions_Lengths.txt
[1] "Arguments for differentialAnalysisDESeq.R:"
[1] "Hepatocyte"
[1] "NKCell"
[1] 0
[1] 0
[1] "RefSeq_GeneBody.gtf"
[1] "/scratch/9022420.1.linga/Input"
[1] "DiffExp_v2_Intronic_Only"
[1] "Intron_Only_Regions_Lengths.txt"
==========================================================

Create SEGEX formatted file:

Printing Rscript command:
Rscript formatForSegex_ver3.R  DiffExp_v2_Intronic_Only_Hepatocyte_NKCell.txt NKCell_SRR_9_vs_Hepatocyte_SRR_11_DiffExp_v2_Intronic_Only_forSEGEXUpload 1 Intronic_Only
==========================================================
Comparison_Info:
NKCell_SRR_9_Hepatocyte_SRR_11
#----------------------------------------------------------------------------------
Running Diff_Genes.R
#----------------------------------------------------------------------------------
Printing Rscript command:
Rscript Diff_Genes.R NKCell_SRR_9_vs_Hepatocyte_SRR_11_DiffExp_v2_Intronic_Only_forSEGEXUpload_DESeq.txt 2 0.05 DESeq Intronic_Only'_'NKCell_SRR_9_Hepatocyte_SRR_11
[1] "Print arguments:"
[1] "-----------------"
[1] "Differential expression_Output:"
[1] "NKCell_SRR_9_vs_Hepatocyte_SRR_11_DiffExp_v2_Intronic_Only_forSEGEXUpload_DESeq.txt"
[1] "fold_change_cutoff:"
[1] "2"
[1] "padj_cutoff:"
[1] "0.05"
[1] "postfix:"
[1] "DESeq"
[1] "count_method:"
[1] "Intronic_Only_NKCell_SRR_9_Hepatocyte_SRR_11"
[1] "-----------------"
[1] "DESeq or EdgeR job most likely failed."
[1] "Quitting R now."
Rscript Diff_Genes.R NKCell_SRR_9_vs_Hepatocyte_SRR_11_DiffExp_v2_Intronic_Only_forSEGEXUpload_EdgeR.txt 2 0.05 EdgeR Intronic_Only'_'NKCell_SRR_9_Hepatocyte_SRR_11
[1] "Print arguments:"
[1] "-----------------"
[1] "Differential expression_Output:"
[1] "NKCell_SRR_9_vs_Hepatocyte_SRR_11_DiffExp_v2_Intronic_Only_forSEGEXUpload_EdgeR.txt"
[1] "fold_change_cutoff:"
[1] "2"
[1] "padj_cutoff:"
[1] "0.05"
[1] "postfix:"
[1] "EdgeR"
[1] "count_method:"
[1] "Intronic_Only_NKCell_SRR_9_Hepatocyte_SRR_11"
[1] "-----------------"
[1] "DESeq or EdgeR job most likely failed."
[1] "Quitting R now."
#----------------------------------------------------------------------------------
Running Venn_Diff_Genes.R
#----------------------------------------------------------------------------------
Printing Rscript command:
#----------------------------------------------------------------------------------
Rscript Venn_Diff_Genes.R Down_Genes_DESeq_Intronic_Only_NKCell_SRR_9_Hepatocyte_SRR_11.txt Down_Genes_EdgeR_Intronic_Only_NKCell_SRR_9_Hepatocyte_SRR_11.txt Intronic_Only_Counting DiffExp_2c
[1] "Print arguments:"
[1] "-----------------"
[1] "File1:"
[1] "Down_Genes_DESeq_Intronic_Only_NKCell_SRR_9_Hepatocyte_SRR_11.txt"
[1] "File2:"
[1] "Down_Genes_EdgeR_Intronic_Only_NKCell_SRR_9_Hepatocyte_SRR_11.txt"
[1] "Subtitle:"
[1] "Intronic_Only_Counting"
[1] "DiffExp_Index:"
[1] "DiffExp_2c"
[1] "-----------------"
#----------------------------------------------------------------------------------
Rscript Venn_Diff_Genes.R Up_Genes_DESeq_Intronic_Only_NKCell_SRR_9_Hepatocyte_SRR_11.txt Up_Genes_EdgeR_Intronic_Only_NKCell_SRR_9_Hepatocyte_SRR_11.txt Intronic_Only_Counting DiffExp_2c
[1] "Print arguments:"
[1] "-----------------"
[1] "File1:"
[1] "Up_Genes_DESeq_Intronic_Only_NKCell_SRR_9_Hepatocyte_SRR_11.txt"
[1] "File2:"
[1] "Up_Genes_EdgeR_Intronic_Only_NKCell_SRR_9_Hepatocyte_SRR_11.txt"
[1] "Subtitle:"
[1] "Intronic_Only_Counting"
[1] "DiffExp_Index:"
[1] "DiffExp_2c"
[1] "-----------------"
#----------------------------------------------------------------------------------
#----------------------------------------------------------------------------------
Merging Count.Table(s) into one text file
#----------------------------------------------------------------------------------
Comparison_Info:
NKCell_SRR_9_Hepatocyte_SRR_11
#----------------------------------------------------------------------------------
==========================================================
Renaming the Differential_Expression_File
==========================================================

List files in Input

-rw-r--r-- 1 kkarri waxmanlab      0 Oct 18 23:12 /scratch/9022420.1.linga/Input/DiffExp_2c_Venn_Tables_NKCell_SRR_9_Hepatocyte_SRR_11.txt
-rwxr-xr-x 1 kkarri waxmanlab   7394 Oct 18 23:11 /scratch/9022420.1.linga/Input/Diff_Genes.R
-rw-r--r-- 1 kkarri waxmanlab 301424 Oct 18 23:12 /scratch/9022420.1.linga/Input/Intron_Only_Regions_Lengths.txt
-rwxr-xr-x 1 kkarri waxmanlab   9553 Oct 18 23:11 /scratch/9022420.1.linga/Input/Venn_Diff_Genes.R
-rwxr-xr-x 1 kkarri waxmanlab   3925 Oct 18 23:11 /scratch/9022420.1.linga/Input/formatForSegex_ver3.R

/scratch/9022420.1.linga/Input/Hepatocyte:
total 1636
drwxr-xr-x 2 kkarri waxmanlab 36864 Oct 18 23:12 .
drwxr-xr-x 4 kkarri waxmanlab  4096 Oct 18 23:12 ..
-rw-r--r-- 1 kkarri waxmanlab     6 Oct 18 23:11 A1-MAA000907-3_11_M-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab     8 Oct 18 23:11 A1-MAA100039-3_11_M-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab     8 Oct 18 23:11 A1-MAA100138-3_56_F-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab     8 Oct 18 23:11 A1-MAA100140-3_57_F-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab     7 Oct 18 23:11 A10-MAA100041-3_9_M-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab     7 Oct 18 23:11 A10-MAA100138-3_56_F-1-1_num_mapped_reads.txt
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-rw-r--r-- 1 kkarri waxmanlab     8 Oct 18 23:12 H4-MAA100140-3_57_F-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab     8 Oct 18 23:12 H5-MAA100138-3_56_F-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab     8 Oct 18 23:12 H5-MAA100140-3_57_F-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab     7 Oct 18 23:12 H6-MAA000907-3_11_M-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab     8 Oct 18 23:12 H6-MAA100138-3_56_F-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab     8 Oct 18 23:12 H6-MAA100140-3_57_F-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab     8 Oct 18 23:12 H7-MAA100039-3_11_M-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab     7 Oct 18 23:12 H7-MAA100140-3_57_F-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab     7 Oct 18 23:12 H8-MAA100039-3_11_M-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab     7 Oct 18 23:12 H8-MAA100041-3_9_M-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab     8 Oct 18 23:12 H8-MAA100138-3_56_F-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab     8 Oct 18 23:12 H9-MAA100041-3_9_M-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab     8 Oct 18 23:12 H9-MAA100138-3_56_F-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab     8 Oct 18 23:12 H9-MAA100140-3_57_F-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab     8 Oct 18 23:12 I14-MAA000377-3_9_M-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab     7 Oct 18 23:12 I8-MAA000907-3_11_M-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab     7 Oct 18 23:12 I9-MAA000907-3_11_M-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab     7 Oct 18 23:12 J11-MAA000907-3_11_M-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab     7 Oct 18 23:12 J12-MAA000377-3_9_M-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab     7 Oct 18 23:12 J14-MAA000907-3_11_M-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab     7 Oct 18 23:12 J17-MAA000377-3_9_M-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab     7 Oct 18 23:12 J4-MAA000907-3_11_M-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab     7 Oct 18 23:12 K1-MAA000907-3_11_M-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab     7 Oct 18 23:12 K10-MAA000907-3_11_M-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab     7 Oct 18 23:12 K11-MAA000377-3_9_M-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab     7 Oct 18 23:12 K11-MAA000907-3_11_M-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab     7 Oct 18 23:12 K15-MAA000377-3_9_M-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab     7 Oct 18 23:12 K15-MAA000907-3_11_M-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab     7 Oct 18 23:12 K22-MAA000907-3_11_M-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab     7 Oct 18 23:12 K9-MAA000377-3_9_M-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab     7 Oct 18 23:12 L10-MAA000907-3_11_M-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab     7 Oct 18 23:12 L11-MAA000377-3_9_M-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab     8 Oct 18 23:12 L15-MAA000377-3_9_M-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab     7 Oct 18 23:12 L15-MAA000907-3_11_M-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab     7 Oct 18 23:12 L17-MAA000907-3_11_M-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab     7 Oct 18 23:12 L22-MAA000907-3_11_M-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab     7 Oct 18 23:12 L7-MAA000377-3_9_M-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab     7 Oct 18 23:12 M1-MAA000907-3_11_M-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab     7 Oct 18 23:12 M10-MAA000377-3_9_M-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab     7 Oct 18 23:12 M12-MAA000907-3_11_M-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab     7 Oct 18 23:12 M16-MAA000377-3_9_M-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab     7 Oct 18 23:12 M2-MAA000377-3_9_M-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab     7 Oct 18 23:12 M3-MAA000907-3_11_M-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab     7 Oct 18 23:12 N1-MAA000907-3_11_M-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab     7 Oct 18 23:12 N11-MAA000377-3_9_M-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab     7 Oct 18 23:12 N14-MAA000907-3_11_M-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab     6 Oct 18 23:12 N15-MAA000907-3_11_M-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab     7 Oct 18 23:12 N20-MAA000377-3_9_M-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab     7 Oct 18 23:12 N7-MAA000377-3_9_M-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab     6 Oct 18 23:12 O12-MAA000377-3_9_M-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab     7 Oct 18 23:12 O14-MAA000377-3_9_M-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab     7 Oct 18 23:12 O14-MAA000907-3_11_M-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab     7 Oct 18 23:12 O2-MAA000907-3_11_M-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab     7 Oct 18 23:12 O21-MAA000907-3_11_M-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab     7 Oct 18 23:12 O9-MAA000907-3_11_M-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab     7 Oct 18 23:12 P14-MAA000907-3_11_M-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab     6 Oct 18 23:12 P15-MAA000377-3_9_M-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab     7 Oct 18 23:12 P17-MAA000377-3_9_M-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab     7 Oct 18 23:12 P19-MAA000907-3_11_M-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab     7 Oct 18 23:12 P21-MAA000907-3_11_M-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab     7 Oct 18 23:12 P22-MAA000377-3_9_M-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab     7 Oct 18 23:12 P22-MAA000907-3_11_M-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab     7 Oct 18 23:12 P7-MAA000907-3_11_M-1-1_num_mapped_reads.txt

/scratch/9022420.1.linga/Input/NKCell:
total 148
drwxr-xr-x 2 kkarri waxmanlab 4096 Oct 18 23:12 .
drwxr-xr-x 4 kkarri waxmanlab 4096 Oct 18 23:12 ..
-rw-r--r-- 1 kkarri waxmanlab    7 Oct 18 23:12 A8-MAA000907-3_11_M-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab    7 Oct 18 23:12 B21-MAA000907-3_11_M-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab    7 Oct 18 23:12 B9-MAA000907-3_11_M-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab    8 Oct 18 23:12 C21-MAA000907-3_11_M-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab    7 Oct 18 23:12 C5-MAA000907-3_11_M-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab    7 Oct 18 23:12 C6-MAA000907-3_11_M-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab    7 Oct 18 23:12 D11-MAA000907-3_11_M-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab    8 Oct 18 23:12 D22-MAA000907-3_11_M-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab    7 Oct 18 23:12 E15-MAA000907-3_11_M-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab    7 Oct 18 23:12 E19-MAA000907-3_11_M-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab    7 Oct 18 23:12 E5-MAA000907-3_11_M-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab    7 Oct 18 23:12 F1-MAA000907-3_11_M-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab    7 Oct 18 23:12 F15-MAA000907-3_11_M-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab    7 Oct 18 23:12 F16-MAA000907-3_11_M-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab    7 Oct 18 23:12 F17-MAA000907-3_11_M-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab    7 Oct 18 23:12 F18-MAA000377-3_9_M-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab    7 Oct 18 23:12 F4-MAA000907-3_11_M-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab    7 Oct 18 23:12 G11-MAA000907-3_11_M-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab    7 Oct 18 23:12 G19-MAA000377-3_9_M-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab    7 Oct 18 23:12 G19-MAA000907-3_11_M-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab    7 Oct 18 23:12 G20-MAA000907-3_11_M-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab    7 Oct 18 23:12 G22-MAA000907-3_11_M-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab    7 Oct 18 23:12 H12-MAA000377-3_9_M-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab    7 Oct 18 23:12 H7-MAA000907-3_11_M-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab    7 Oct 18 23:12 I22-MAA000377-3_9_M-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab    7 Oct 18 23:12 J20-MAA000377-3_9_M-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab    7 Oct 18 23:12 M10-MAA000907-3_11_M-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab    7 Oct 18 23:12 M15-MAA000377-3_9_M-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab    7 Oct 18 23:12 M17-MAA000907-3_11_M-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab    7 Oct 18 23:12 M18-MAA000907-3_11_M-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab    7 Oct 18 23:12 M8-MAA000907-3_11_M-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab    7 Oct 18 23:12 N16-MAA000907-3_11_M-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab    7 Oct 18 23:12 N6-MAA000907-3_11_M-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab    7 Oct 18 23:12 N9-MAA000907-3_11_M-1-1_num_mapped_reads.txt
-rw-r--r-- 1 kkarri waxmanlab    7 Oct 18 23:12 O21-MAA000377-3_9_M-1-1_num_mapped_reads.txt
==========================================================

List files in scratch

total 73M
drwx------   3 kkarri waxmanlab 4.0K Oct 18 23:12 .
drwxrwxrwt. 16 root   root       20K Oct 18 23:11 ..
-rw-r--r--   1 kkarri waxmanlab  19K Oct 18 23:11 Condition_1.txt
-rw-r--r--   1 kkarri waxmanlab 2.0K Oct 18 23:11 Condition_2.txt
drwxr-xr-x   4 kkarri waxmanlab 4.0K Oct 18 23:12 Input
-rw-r--r--   1 kkarri waxmanlab  72M Oct 18 23:11 RefSeq_GeneBody.gtf
-rwxr-xr-x   1 kkarri waxmanlab  16K Oct 18 23:11 differentialAnalysis.R

==========================================================
Re-naming files in OUTPUT_DIR
Need to append the COUNT_PROGRAM name to all output files

List files in OUTPUT_DIR

total 32K
drwxr-sr-x 2 kkarri waxmanlab 512 Oct 18 23:12 .
drwxr-sr-x 6 kkarri waxmanlab 32K Oct 18 23:11 ..
-rw-r--r-- 1 kkarri waxmanlab   0 Oct 18 23:12 DiffExp_2c_Venn_Tables_NKCell_SRR_9_Hepatocyte_SRR_11_featureCounts.txt
==========================================================
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Finished on : Thu Oct 18 23:12:17 EDT 2018
0 minutes and 23 seconds elapsed.
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