Sample	total_passed	total_failed	secondary_passed	secondary_failed	supplementary_passed	supplementary_failed	duplicates_passed	duplicates_failed	mapped_passed	mapped_failed	mapped_passed_pct	mapped_failed_pct	paired in sequencing_passed	paired in sequencing_failed	read1_passed	read1_failed	read2_passed	read2_failed	properly paired_passed	properly paired_failed	properly paired_passed_pct	properly paired_failed_pct	with itself and mate mapped_passed	with itself and mate mapped_failed	singletons_passed	singletons_failed	singletons_passed_pct	singletons_failed_pct	with mate mapped to a different chr_passed	with mate mapped to a different chr_failed	with mate mapped to a different chr (mapQ >= 5)_passed	with mate mapped to a different chr (mapQ >= 5)_failed	flagstat_total
FIRKO_S584_statistics_for_all_accepted_reads	60297650	0	7487892	0	0	0	0	0	60297650	0	100.0	nan	52809758	0	26404879	0	26404879	0	52809758	0	100.0	nan	52809758	0	0	0	0.0	nan	0	0	0	0	60297650
FIRKO_S584_statistics_for_primary_reads	52809758	0	0	0	0	0	0	0	52809758	0	100.0	nan	52809758	0	26404879	0	26404879	0	52809758	0	100.0	nan	52809758	0	0	0	0.0	nan	0	0	0	0	52809758
FIRKO_S584_statistics_for_primary_unique_reads	46756146	0	0	0	0	0	0	0	46756146	0	100.0	nan	46756146	0	23378073	0	23378073	0	46756146	0	100.0	nan	46756146	0	0	0	0.0	nan	0	0	0	0	46756146
FIRKO_S593_statistics_for_all_accepted_reads	97985078	0	9207590	0	0	0	0	0	97985078	0	100.0	nan	88777488	0	44388744	0	44388744	0	88777488	0	100.0	nan	88777488	0	0	0	0.0	nan	0	0	0	0	97985078
FIRKO_S593_statistics_for_primary_reads	88777488	0	0	0	0	0	0	0	88777488	0	100.0	nan	88777488	0	44388744	0	44388744	0	88777488	0	100.0	nan	88777488	0	0	0	0.0	nan	0	0	0	0	88777488
FIRKO_S593_statistics_for_primary_unique_reads	82083720	0	0	0	0	0	0	0	82083720	0	100.0	nan	82083720	0	41041860	0	41041860	0	82083720	0	100.0	nan	82083720	0	0	0	0.0	nan	0	0	0	0	82083720
FIRKO_S594_statistics_for_all_accepted_reads	67164886	0	7374128	0	0	0	0	0	67164886	0	100.0	nan	59790758	0	29895379	0	29895379	0	59790758	0	100.0	nan	59790758	0	0	0	0.0	nan	0	0	0	0	67164886
FIRKO_S594_statistics_for_primary_reads	59790758	0	0	0	0	0	0	0	59790758	0	100.0	nan	59790758	0	29895379	0	29895379	0	59790758	0	100.0	nan	59790758	0	0	0	0.0	nan	0	0	0	0	59790758
FIRKO_S594_statistics_for_primary_unique_reads	54210148	0	0	0	0	0	0	0	54210148	0	100.0	nan	54210148	0	27105074	0	27105074	0	54210148	0	100.0	nan	54210148	0	0	0	0.0	nan	0	0	0	0	54210148
FIRKO_S649_statistics_for_all_accepted_reads	51998904	0	6526528	0	0	0	0	0	51998904	0	100.0	nan	45472376	0	22736247	0	22736129	0	45472080	0	100.0	nan	45472080	0	296	0	0.0	nan	0	0	0	0	51998904
FIRKO_S649_statistics_for_primary_reads	45472376	0	0	0	0	0	0	0	45472376	0	100.0	nan	45472376	0	22736247	0	22736129	0	45472080	0	100.0	nan	45472080	0	296	0	0.0	nan	0	0	0	0	45472376
FIRKO_S649_statistics_for_primary_unique_reads	40591489	0	0	0	0	0	0	0	40591489	0	100.0	nan	40591489	0	20295792	0	20295697	0	40591248	0	100.0	nan	40591248	0	241	0	0.0	nan	0	0	0	0	40591489
FIRKO_S658_statistics_for_all_accepted_reads	60532700	0	6601371	0	0	0	0	0	60532700	0	100.0	nan	53931329	0	26965726	0	26965603	0	53931028	0	100.0	nan	53931028	0	301	0	0.0	nan	0	0	0	0	60532700
FIRKO_S658_statistics_for_primary_reads	53931329	0	0	0	0	0	0	0	53931329	0	100.0	nan	53931329	0	26965726	0	26965603	0	53931028	0	100.0	nan	53931028	0	301	0	0.0	nan	0	0	0	0	53931329
FIRKO_S658_statistics_for_primary_unique_reads	48964138	0	0	0	0	0	0	0	48964138	0	100.0	nan	48964138	0	24482119	0	24482019	0	48963882	0	100.0	nan	48963882	0	256	0	0.0	nan	0	0	0	0	48964138
FIRKO_S661_statistics_for_all_accepted_reads	48939146	0	5678124	0	0	0	0	0	48939146	0	100.0	nan	43261022	0	21630511	0	21630511	0	43261022	0	100.0	nan	43261022	0	0	0	0.0	nan	0	0	0	0	48939146
FIRKO_S661_statistics_for_primary_reads	43261022	0	0	0	0	0	0	0	43261022	0	100.0	nan	43261022	0	21630511	0	21630511	0	43261022	0	100.0	nan	43261022	0	0	0	0.0	nan	0	0	0	0	43261022
FIRKO_S661_statistics_for_primary_unique_reads	39360094	0	0	0	0	0	0	0	39360094	0	100.0	nan	39360094	0	19680047	0	19680047	0	39360094	0	100.0	nan	39360094	0	0	0	0.0	nan	0	0	0	0	39360094
FIRKO_S662_statistics_for_all_accepted_reads	76457254	0	8127430	0	0	0	0	0	76457254	0	100.0	nan	68329824	0	34164912	0	34164912	0	68329824	0	100.0	nan	68329824	0	0	0	0.0	nan	0	0	0	0	76457254
FIRKO_S662_statistics_for_primary_reads	68329824	0	0	0	0	0	0	0	68329824	0	100.0	nan	68329824	0	34164912	0	34164912	0	68329824	0	100.0	nan	68329824	0	0	0	0.0	nan	0	0	0	0	68329824
FIRKO_S662_statistics_for_primary_unique_reads	61974286	0	0	0	0	0	0	0	61974286	0	100.0	nan	61974286	0	30987143	0	30987143	0	61974286	0	100.0	nan	61974286	0	0	0	0.0	nan	0	0	0	0	61974286
FIRKO_S664_statistics_for_all_accepted_reads	67545546	0	8723464	0	0	0	0	0	67545546	0	100.0	nan	58822082	0	29411041	0	29411041	0	58822082	0	100.0	nan	58822082	0	0	0	0.0	nan	0	0	0	0	67545546
FIRKO_S664_statistics_for_primary_reads	58822082	0	0	0	0	0	0	0	58822082	0	100.0	nan	58822082	0	29411041	0	29411041	0	58822082	0	100.0	nan	58822082	0	0	0	0.0	nan	0	0	0	0	58822082
FIRKO_S664_statistics_for_primary_unique_reads	52197942	0	0	0	0	0	0	0	52197942	0	100.0	nan	52197942	0	26098971	0	26098971	0	52197942	0	100.0	nan	52197942	0	0	0	0.0	nan	0	0	0	0	52197942
FIRKO_S665_statistics_for_all_accepted_reads	50405300	0	6201748	0	0	0	0	0	50405300	0	100.0	nan	44203552	0	22101776	0	22101776	0	44203552	0	100.0	nan	44203552	0	0	0	0.0	nan	0	0	0	0	50405300
FIRKO_S665_statistics_for_primary_reads	44203552	0	0	0	0	0	0	0	44203552	0	100.0	nan	44203552	0	22101776	0	22101776	0	44203552	0	100.0	nan	44203552	0	0	0	0.0	nan	0	0	0	0	44203552
FIRKO_S665_statistics_for_primary_unique_reads	39724474	0	0	0	0	0	0	0	39724474	0	100.0	nan	39724474	0	19862237	0	19862237	0	39724474	0	100.0	nan	39724474	0	0	0	0.0	nan	0	0	0	0	39724474