FastQCFastQC Report
Fri 23 Feb 2024
G221_M69_CKDL240003768-1A_22JKTWLT3_L7_2.fq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameG221_M69_CKDL240003768-1A_22JKTWLT3_L7_2.fq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences9809491
Sequences flagged as poor quality0
Sequence length150
%GC50

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG236480.24107265096629374No Hit
CACGATCACAAGAAAGACGTGGTCCTGACAGACAGACAATCCTATTCCCT192040.19576958682157924No Hit
CTAGCCTCTGGCAAAATGAAGTGGGTAACCTTTCTCCTCCTCCTCTTCGT141860.1446150467949866No Hit
CGATCACAAGAAAGACGTGGTCCTGACAGACAGACAATCCTATTCCCTAC129510.13202519886098066No Hit
AAAGACGTGGTCCTGACAGACAGACAATCCTATTCCCTACCAAAATGAAG125630.12806984582584355No Hit
GAAAGACGTGGTCCTGACAGACAGACAATCCTATTCCCTACCAAAATGAA122820.1252052731380252No Hit
CCCAGCTCTGGGACAGCAAGCTGAAAATGACTCCCTCCATCTCATGGGGT113150.11534747317674282No Hit
CTTTAATGTAGAAAAGATTAATGGGGAATGGCATACTATTATCCTGGCCT110380.11252367732433823No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)