FastQCFastQC Report
Fri 23 Feb 2024
G221_M80_CKDL240003768-1A_22JKTWLT3_L7_1.fq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameG221_M80_CKDL240003768-1A_22JKTWLT3_L7_1.fq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences10384924
Sequences flagged as poor quality0
Sequence length150
%GC51

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CTGGTTTTCACACATGTACTTGGCAAGTTCCGCCCTGTCATCTGCGCATT182660.17588958763684742No Hit
CTCAGCTTTAAACTCTTTGGGGACATATGTTTCATCAACTGTCAGAGCAG162530.1565057192522545No Hit
CTGAGTCTTCATGTCTTTTTTTCTCAGGGTAGCCTGAGAAGGTTGTGGTT131050.12619254604077987No Hit
CTCCCAAATCATTATACCGATGGGCGATCTCACTCTTGTGTGCTTCTCGG120730.11625506359025835No Hit
GGGCGATCTCACTCTTGTGTGCTTCTCGGCGAAACACACCCCTGGAAAAA120240.11578322576072776No Hit
GGCGATCTCACTCTTGTGTGCTTCTCGGCGAAACACACCCCTGGAAAAAG118470.1140788319683418No Hit
GGAGGATTGGCTTCAGCGCAGCACTTTTCCAGAGTGGCTTCATATTTCTT116280.11197000575064392No Hit
GTTTAGGCTAAGGCGTCTTTGCATCTAGTGACAAGGTTTGGACCCTCAGT113380.10917749614729969No Hit
CGCCTTTCCACCAGGGATCCACTACAGCACTTGGTAACATGCTCACTCAC108020.10401616805284276No Hit
CAACAAAATCAGCAGCAATGGCAGGCAGATCAGCAGGCATGGTGTCATGC104570.1006940445592091No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)