FastQCFastQC Report
Thu 18 May 2023
G202M10_CKDL230013148-1A_H5NKYDSX7_L1_R1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameG202M10_CKDL230013148-1A_H5NKYDSX7_L1_R1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences13782169
Sequences flagged as poor quality0
Sequence length150
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CTCCTGCCTGATGGAGTATCGATTCTCCGAGTGCAAAGTCCAGCATGCCG273020.19809654053726958No Hit
ACAGGTATCCACAACTGGCTCTAGAGTAGATCCAAGTACACCTTCATCTC247850.17983381280551705No Hit
GAGCTATTTACTTAAACCTTCAGTATCCTGGCCTTTGTCCCCTCTGCAGA204050.14805361913643636No Hit
TGATGCTTTACCTTCATCACTGATGCGAACATCCAGCTTCTCTCTGACTC199480.1447377404819227No Hit
AGGCTATCACTGGCTTCCCTTTTGTCTACATAAATGCTTTCACGGGCCTG198090.14372919095680803No Hit
AGCCCAGGCTGGGAGTGGCTGGGGTTCCGCGGGGTGTCACCAGCCCAGCC173580.12594534285568548No Hit
GCCATTGATTGACATGAGGCACTGGGCCAGACAGATGAATTTCTCTGGTT163550.1186678236205056No Hit
CCAACACAAAACCCCAAGAAAAATCATTGGTTCACCAAGTTGGGCTTTGG160140.11619361219558401No Hit
GGAAAGAAACACGGGGCCGTTAAAATCCGCTCGCTCGATACATGTTTGCT154430.11205057781543674No Hit
TCATGGAAGGTCAGCTTTGAGGTTTCAGAAGCCCATACCATTCCCAGTTA146400.1062242089761053No Hit
CGGCTTGCTTGCTTGCTCGCTTTCAGATCTCTAAAGGCATCTTGGTTTCT143930.10443203823723246No Hit
AGGTCAGCTTTGAGGTTTCAGAAGCCCATACCATTCCCAGTTAGCTCTCT142840.10364116127149507No Hit
TTTGTTCCCATGGCTATCCCCAGCGTGCTTCATCTCCCTCAGTCTCCCTT140520.10195782681231089No Hit
AGAGCAGACTGGGGGCTGGGGATCTGATTATTGACAGGGGAGGAGAGAAC140100.10165308522918273No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)