FastQCFastQC Report
Thu 18 May 2023
G202M10_CKDL230013148-1A_H5NKYDSX7_L1_R2.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameG202M10_CKDL230013148-1A_H5NKYDSX7_L1_R2.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences13782169
Sequences flagged as poor quality0
Sequence length150
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ACCAGAGAGGACTGCAGGAAAGCTTGGGAAGTGGCGGGGTAAAACAAACA260870.18928080188249033No Hit
AACTATAGCTTTAAAGCCACAGAAAAATATAAAACCAAATAGTGTAGATA244820.17763531995580667No Hit
CTCCTGAGCAAACCCTGCAGGACAGGAGACATGACAAATGGTGGGATTGT200610.14555764045557704No Hit
CACCAGCAGTTTAGTGTCAACAAACACTGAGCAACATAGCAAACACCAGG192430.13962243533655697No Hit
TCGGCGCCCGGAGACACCCGGTCCTGTCCCCATGGTGGCCGGAGGAAGCT177230.12859369232810888No Hit
GAGAGATAGGAGTGCCCAGCCAGCCACAAAGGCAGAAGAAAAAACACACG174570.12666366230163045No Hit
CATTCAACTCATGAACATGAGATCTATGTGGGACAACACACAAGATAGCA163800.11884921741998665No Hit
TTGCAACTCCAACCCCAGAGGATCTGACACCTCTTATGGTGTCATTCAGA161230.11698448916132143No Hit
TAAAGTCATCATATTGACCAGCCTAAGCATCCCAAAGCCCTTAACTGCCG152830.110889657498758No Hit
GCACAATCTCTGCCTCAGTGACATGGCCAGAGGGGCTGGTGACATGGGCA146830.10653620631121269No Hit
GGGCAATGTCACAGGAGAGGCAGTCTGTGTATTTGAGGAGTGTCAGGAAA144200.10462794354067201No Hit
GGCCAGTGGGCAGAGGGCAGAGGGTAAGGGCAGAGGGTAAAGGGTAGCAG141920.1029736320894048No Hit
GGGCAGAGGGCAGAGGGTAAGGGCAGAGGGTAAAGGGTAGCAGGAGGCAG141380.10258182148252572No Hit
GCTCAGATCACAGGGATACGCCAAGGCCAGAGCATCGATTTTATAGCAAT140520.10195782681231089No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)