FastQCFastQC Report
Thu 18 May 2023
G202M12_CKDL230013148-1A_H5NKYDSX7_L1_R1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameG202M12_CKDL230013148-1A_H5NKYDSX7_L1_R1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences11178559
Sequences flagged as poor quality0
Sequence length150
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGTTGATTTCTCTGACCCTCAACTGGCCTGATTAGAAGACCTGGCATTCT190030.16999507718302512No Hit
TGATGCTTTACCTTCATCACTGATGCGAACATCCAGCTTCTCTCTGACTC175810.15727429626662973No Hit
GGCTGGCGTCTGAAGCCCCAGCCTAGCAGCATCGGACCTGAGTTCCTCTG172210.15405384540171949No Hit
TCAATCAGTGGCATCAATTTGAACAAATTATTGAGAAATGATAAAGCTGT166130.14861486171875998No Hit
CTCCTGCCTGATGGAGTATCGATTCTCCGAGTGCAAAGTCCAGCATGCCG159830.1429790727051671No Hit
TGAGATTCTCTCTTGCATGACCACTCAGGCTTCCCTGTAATCCCGCTAAA157810.14117204194207858No Hit
AGGCTATCACTGGCTTCCCTTTTGTCTACATAAATGCTTTCACGGGCCTG156080.1396244363875523No Hit
TCATGGAAGGTCAGCTTTGAGGTTTCAGAAGCCCATACCATTCCCAGTTA147840.13225318218564663No Hit
CCAACACAAAACCCCAAGAAAAATCATTGGTTCACCAAGTTGGGCTTTGG147210.13168960328428736No Hit
ATCAGAGCTGCTTCATGAGATCCAACTGCTCTAAGACCCAGTAACCTTTC145590.13024040039507775No Hit
ACAGGTATCCACAACTGGCTCTAGAGTAGATCCAAGTACACCTTCATCTC142680.12763720261260866No Hit
TCTAGTTGAAAGAGAGATTAAACAATGTTTGATTAGTCAAGAATGTTCCA127530.11408447188944479No Hit
AAATTAAGCTGATTAGCCCTGAAAGCGCTTGGCGGTTTCCACCCCCTTAT117130.10478094716859301No Hit
AATGCCTACCATGCCATGTAGGTGAATAATCACCACTGAGTTTCTCCGGG114570.10249084877576797No Hit
TTCCTGTGATTTTTTTTTCTCTTCCAGAGTTCAAAAACTGGTGACGAAAG113800.10180203011855107No Hit
TCTCTAGTTACAGAAATACCCCCACTTCAGGGCTATTTCTAGAGGCAGTA113390.10143525654782518No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)