FastQCFastQC Report
Thu 18 May 2023
G202M13_CKDL230013148-1A_H5NKYDSX7_L1_R1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameG202M13_CKDL230013148-1A_H5NKYDSX7_L1_R1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences11967779
Sequences flagged as poor quality0
Sequence length150
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AAGTCCAGCAATATTTCAAATCTAAGTTTGCTCTGAGTCAACTACAGACC241290.20161635671915398No Hit
GGCTGGCGTCTGAAGCCCCAGCCTAGCAGCATCGGACCTGAGTTCCTCTG241030.2013991067181304No Hit
ACAGGTATCCACAACTGGCTCTAGAGTAGATCCAAGTACACCTTCATCTC221090.18473770279347573No Hit
AGGCTATCACTGGCTTCCCTTTTGTCTACATAAATGCTTTCACGGGCCTG209490.17504501044011592No Hit
CTCCTGCCTGATGGAGTATCGATTCTCCGAGTGCAAAGTCCAGCATGCCG179120.14966853916670755No Hit
TCAATCAGTGGCATCAATTTGAACAAATTATTGAGAAATGATAAAGCTGT173860.14527340453061507No Hit
CGGCTTGCTTGCTTGCTCGCTTTCAGATCTCTAAAGGCATCTTGGTTTCT163850.13690927949120718No Hit
CCTCCCACCCCTGGGCTGTACCTGCCACAACCTTCTCTGCGTGACCTGTG160270.13391791409249787No Hit
TCATGGAAGGTCAGCTTTGAGGTTTCAGAAGCCCATACCATTCCCAGTTA132520.11073065436786558No Hit
GCCATTGATTGACATGAGGCACTGGGCCAGACAGATGAATTTCTCTGGTT129920.10855815435762976No Hit
ATCAGAGCTGCTTCATGAGATCCAACTGCTCTAAGACCCAGTAACCTTTC124730.10422151010642827No Hit
TCTGTCGCCCTGTAGAGGATCCTGGCTCTGGGCCCTGTTCTGCACTGTCT120800.10093769278326412No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)