FastQCFastQC Report
Thu 18 May 2023
G202M13_CKDL230013148-1A_H5NKYDSX7_L1_R2.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameG202M13_CKDL230013148-1A_H5NKYDSX7_L1_R2.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences11967779
Sequences flagged as poor quality0
Sequence length150
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CTGGAATCAGACGCCCACAGGAGCCAGGCAGGACACACAGGGCCTGTGCT240730.20114843364002627No Hit
AACTATAGCTTTAAAGCCACAGAAAAATATAAAACCAAATAGTGTAGATA234480.19592607784619018No Hit
AGAAGGAGGATGAGGAGGAGGAGGAAGAAGAGGAGGAAGAAGAAGAAGAA222520.1859325777991054No Hit
CTCCTGAGCAAACCCTGCAGGACAGGAGACATGACAAATGGTGGGATTGT199820.1669649815558927No Hit
ACCAGAGAGGACTGCAGGAAAGCTTGGGAAGTGGCGGGGTAAAACAAACA166680.13927396219465618No Hit
GCACAATCTCTGCCTCAGTGACATGGCCAGAGGGGCTGGTGACATGGGCA155430.12987372176575118No Hit
GGGCAATGTCACAGGAGAGGCAGTCTGTGTATTTGAGGAGTGTCAGGAAA152790.1276677986784348No Hit
GCCAAGCTGCACCCCCATGACCTACTTAATCCAACCAGGCCAAGCCCCAC148080.12373223135219993No Hit
ACCAGCCCACAGCTGAGTGTGCCTCCCAGTGAACCCTGAAGCTGGGCTGT123130.10288458702320621No Hit
CTGAGCAGTAGAGCAGGGGTGCTGTGGCACATAGGACAGGAGATAGAGCT122300.1021910581737848No Hit
CATTCAACTCATGAACATGAGATCTATGTGGGACAACACACAAGATAGCA121220.10128863509260991No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)