FastQCFastQC Report
Thu 18 May 2023
G202M1_CKDL230013148-1A_H5NKYDSX7_L1_R1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameG202M1_CKDL230013148-1A_H5NKYDSX7_L1_R1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences10611507
Sequences flagged as poor quality0
Sequence length150
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATGTCTGGAGCCGAAAACGGTGCTGCCTCAGAAGCTCTGTGGCTCTCGTC1007100.9490640679028908No Hit
GCCTTACTCTGAGGAATCAAAGCATAAGGTTTTATCACTCTTCATGATCC676990.637977244890853No Hit
GTCACATCAGCTCCTGTATCCACCAAATCTTCTATTTCAACACCGTTTAC473500.44621371874890153No Hit
GGCCCTCACTATGTGCTCTTTAATCTCACTCTTCCTTTCTTCTCTCCCCT396920.37404677771027245No Hit
GGCTTTCAAGTACAGGACAGCATCAACTAACAGAAGGTCATTAAATGAGG364370.3433725294625919No Hit
GCCTTACTCTGAGGAATCAAAGCATAAGGCTGAAATGTTTTATACAATTA258110.2432359513120992No Hit
TGGGCACATTTCTCCTGAACTCTGTCCTGTGCACTGTTTGTTCTCTCTAT246440.23223845585740086No Hit
CTGGGTGGCCAAAGGATTGTGTCTCCTAGGAGAGGAAAATGGAGAAACTG238250.22452041920153284No Hit
TTCAAACACTAAAACTGCAGCAATACATCATTAAAAGCTGAAAAAATGAA227490.21438048337526425No Hit
GGTTGATTTCTCTGACCCTCAACTGGCCTGATTAGAAGACCTGGCATTCT196920.185572134099332No Hit
ACAGGTATCCACAACTGGCTCTAGAGTAGATCCAAGTACACCTTCATCTC188210.17736406337007551No Hit
GCTCACACCAGGACAGAGTCTAGCACTGGACCTGGGGATTTATCTGTTTG173430.163435787207227No Hit
GTGTAGAAGAGCTAGCCCCATGCCTTGCCTGGGCATCCCATTTCAGCTGG162540.1531733428626113No Hit
GCACTCATAGGTGGGGTAGATGTTGGGGTGGGTCAACTCAAAGCCCTGGA162410.1530508343442642No Hit
ACTGACCCCTCTCTCAGTTTCTCCATCTGGGAAATGGGAATAACAAGCCT161310.15201422380440405No Hit
GGCGGAAGGTCGCGGCCGGCCCAGGGCGGCGACTCCCGCCCTCAGGCGAC159670.1504687317267943No Hit
GGAAATTAATTTACTTCTTCCTAAGATCATCCCAGCTGTCCACACTGGCC158770.14962059583054507No Hit
TAACGTCGTAAGCGGCACATTAGGGTTTTGTAACTCTTTGTTCTTAAGCT150490.14181774558505214No Hit
TGTGTTGACATGCAGACCCTCATCCTGAATGCATATCTATGCTCAAGAAC146180.13775611701523638No Hit
GGAAACCAGGAAAGGGGGTAACATTTGAAATGTAAATGAAAACAATATCA144940.13658757422484855No Hit
GGCTGATCTCAGACTCATGAACATGCCTCTGCCTCCTGAGTGCTGGGATT144170.13586194684694644No Hit
TCTTGGTTGCCATTTTGCCCTATTGACAGTGTCCTTTGCCTTACAGAAGC138730.13073543654072886No Hit
TGGTCCTTGAACTAGTGTTCACTTCCCTGGCTGCCCCAGGCAGACCATCA137640.12970824973304923No Hit
TGAGTAAAGTTTAAAAACAGTGACCTCTTATTAAAAGGTATGATTTCTTC134780.12701306232941278No Hit
TGTCTGGAGCCGAAAACGGTGCTGCCTCAGAAGCTCTGTGGCTCTCGTCT133600.12590106193210823No Hit
TGATTCGTGAATGGTGTTTGTGAGTGGATTGAGCTGCCTCTGCTGATTCA130350.12283834897343045No Hit
CTCTTCCCTTCACCCTATAACAGACCCATGCATTTCCCTAACAGAAGGCC129980.12248967088275022No Hit
TTTTCCACATTTCTTAATTCCTTCAAAATGCTCTCTGTCCCAGAGTCTTA128850.12142478914634838No Hit
GGGTAGCGAGCGAGCAAACGGGAATGGAGCAACCAGGGGCTGCAGCCAGG128830.1214059416819873No Hit
AAGTCCAGCAATATTTCAAATCTAAGTTTGCTCTGAGTCAACTACAGACC126150.11888038145760069No Hit
TCCAGTCTACAACAGCTCCTAATGGAAGAAGCACAGGACATTACTTAAGT125090.11788146584646271No Hit
AGTTTTTCACAGCCACTTGAGTTTAGTCTTTTGAGGACTCTCTTTTTTAA124700.11751394029142138No Hit
GGACTCTGCTCTTGCTGACCTTTTCATGAATAATGGAATACTGTAGTTCT123580.11645848228720013No Hit
AGGGTTGAAAGTCAGTGGCTCATGCACTTCTTTGCGAGTAACAAAATATT123090.11599671941035329No Hit
CCCTTTCTACAGCCACATACTAAACGTAGACAAGTTGGCCTTTTCCTATT122570.11550668533696486No Hit
ACATGACTCCAGCTTCTGTCAAGTTGACATGAAATGAGGCAGCAGCAGCT122210.11516743097846519No Hit
CCTGCTGGTTAATGTGTCCCCTGCTGGTTAATGTGTCCCCTGCTGGTTAA121630.11462085451199343No Hit
GTTAACCCTCAGAGTACACTTTATTTGATTCTCTGAATAAAGCTGGGTAT121590.11458315958327125No Hit
CTCGGCTCCCGCGCTCGGTTCCCCTGCGGCTCGGCGCCATGGGTGAGTGC121050.11407427804552171No Hit
AGAAGAGCTAGCCCCATGCCTTGCCTGGGCATCCCATTTCAGCTGGCCGT120440.11349943038250834No Hit
TCTATACCCTTTCTACAGCCACATACTAAACGTAGACAAGTTGGCCTTTT120090.1131695997561892No Hit
GGCCTTTTCCTATTGCTTTAAAGGCAGAGGACTGTATTGATCAGTCCAAA116650.10992783588608102No Hit
AGGCTATCACTGGCTTCCCTTTTGTCTACATAAATGCTTTCACGGGCCTG116630.10990898842171994No Hit
CTAGAGGCTGAGGGATCCCGTATAGTGCTTCAGCTGAACTTCTTCCGGCT116020.10933414075870657No Hit
ATACATTACCCAGTCCAGCTGCATTTGGGAGATTTCTATATGGAGAGGCA115970.10928702209780383No Hit
AAATTAATGATGGCTAAATATAGAAAGAGGAAACTAAAAGGACATAATCA115400.10874986936351265No Hit
ATGCCCAACCCTCAGCATACTACATTTCATGCCCACTCAAGTCTATCAGT115290.10864620830952663No Hit
GGCTCTCTTGTCTACAGCACAAAAATACAGTGTATCTGTAAATAACTTTC115270.10862736084516554No Hit
AGAAACGTGAGGTCCTTCTTGATGACAGGGAACAGGGGAATGACAGGAGG114750.10813732677177709No Hit
TGGTCCTCATGTAGTCTTTTGACCAGCCAACCTCTTTTTCAAGGCTGTTG114100.10752478418004152No Hit
TACTTGTATCTAGGACACAGAATAGAAAAGTTAATGTTAAATCAAAAAAT113880.10731746207206949No Hit
GGACTCTGCTCTTGCTGACCTTTTCATGAATAATGCAATACTATAATTCC113120.10660125842634792No Hit
TAAACATCAAGGCTGCCCCTATGTGTTCAATGTAGCAAACTTAAGCAGTG112830.10632797019311205No Hit
TTTCCTCTCTATGTTTGACTCTTGGGAGAGGACTATATGGTCTGCTTACC112250.10578139372664033No Hit
GCACTCAGGACTCTGAACCAGGACAATCATATCTTCCAGGACAGTCTGAA112240.10577196999445979No Hit
GATTACATTACACATTCTGCAAGCATAGCACAGAGCAATGTTCTACTTTA112070.10561176654739048No Hit
GAACCCCAATAAGGAAGCTTGAAATATACATTGGAAAAATTGTAGAATTT111800.10535732577851573No Hit
AGCCCTTCTGAGTTTTGCTGTGGGTGCTGCTTGTCGTTGTGGTGGTTGTT110920.10452803734662759No Hit
TTGGCTGTTCCAAAGTTGGCTTAGACAGCTACATTGACTATCTCTGTGAT109040.10275637569668475No Hit
ATCCTATGCTCACTGAGGATTGCTGGTTATGTTTGGGCTTGGGGGTGACG108490.10223807042675465No Hit
TCCTGTAGGTCTCTATAGTTAATCCATAAATAAAACTCCTTTGAAGTTGA108110.10187996860389387No Hit
AGAGAACTTCTGGTGGATTCACCATCCCTGATCTCAAACTGTAATACAGA107670.10146532438794979No Hit
TGTGAAGGGGACGCTGAAGTTTGTGGCCCAGAACCTTTGTTACATGGTTG107660.10145590065576925No Hit
AAATCTGTTGGTTTCAAGGTCAATTAGGACAGCTGCCAGTTGGAGGTCAG107430.10123915481561668No Hit
CCATTGGACTGACCTCGGAGTTCCCTGATGGAGGAGTTGGAGAAGAGACT107180.10100356151110298No Hit
ATTCAGTGTTCCCGAAGTAGGCCACTGCTTAATTATTGCTTCCAGCCCTG106990.1008245105996726No Hit
CAACACTAGTGCCATCCATCTAAAAAAATTGATTTGGGCCTTTTCCCCCC106930.10076796820658931No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)