FastQCFastQC Report
Thu 18 May 2023
G202M3_CKDL230013148-1A_H5NKYDSX7_L1_R2.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameG202M3_CKDL230013148-1A_H5NKYDSX7_L1_R2.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences12847897
Sequences flagged as poor quality0
Sequence length150
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CTGGAATCAGACGCCCACAGGAGCCAGGCAGGACACACAGGGCCTGTGCT174990.13620127869954124No Hit
CTCCTGAGCAAACCCTGCAGGACAGGAGACATGACAAATGGTGGGATTGT165220.12859692134829537No Hit
CTGTTGACAGACAGCACAGAGTGCCATGGGTCAGAGAAATTGGCAGTCAC160730.12510218598421205No Hit
AACTATAGCTTTAAAGCCACAGAAAAATATAAAACCAAATAGTGTAGATA136870.10653105329222362No Hit
ACCAGAGAGGACTGCAGGAAAGCTTGGGAAGTGGCGGGGTAAAACAAACA136650.10635981904275851No Hit
GCCAAGCTGCACCCCCATGACCTACTTAATCCAACCAGGCCAAGCCCCAC130840.10183767818188455No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)